首页 > 最新文献

ACS Publications最新文献

英文 中文
IF:
Phenylphenalenones and Linear Diarylheptanoid Derivatives Are Biosynthesized via Parallel Routes in Musella lasiocarpa, the Chinese Dwarf Banana. 中国矮香蕉(Musella lasiocarpa)通过平行途径生物合成苯基苯丙烯酮和线性二芳基庚烷类衍生物
IF 4.9 1区 化学 Q1 CHEMISTRY, ORGANIC Pub Date : 2024-07-05 Epub Date: 2024-06-20 DOI: 10.1021/acs.orglett.4c01750
Hui Lyu, Lukas Ernst, Yoko Nakamura, Yu Okamura, Tobias G Köllner, Katrin Luck, Benye Liu, Yu Chen, Ludger Beerhues, Jonathan Gershenzon, Christian Paetz

Here, we use transcriptomic data from seeds of Musella lasiocarpa to identify five enzymes involved in the formation of dihydrocurcuminoids. Characterization of the substrate specificities of the enzymes reveals two distinct dihydrocurcuminoid pathways leading to phenylphenalenones and linear diarylheptanoid derivatives, the major seed metabolites. Furthermore, we demonstrate the stepwise conversion of dihydrobisdemethoxycurcumin to the phenylphenalenone 4'-hydroxylachnanthocarpone by feeding intermediates to M. lasiocarpa root protein extract.

在本文中,我们利用麝香草(Musella lasiocarpa)种子的转录组数据,确定了参与形成二氢姜黄素的五种酶。对这些酶的底物特异性进行的表征揭示了两种不同的二氢卷烟素途径,它们导致了主要的种子代谢产物--苯基苯丙烯酮和线性二芳基庚烷衍生物。此外,我们还证明了通过将中间产物喂入 M. lasiocarpa 根蛋白提取物,二氢双去甲氧基姜黄素可以逐步转化为 4'-hydroxylachnanthocarpone 苯基菲烯酮。
{"title":"Phenylphenalenones and Linear Diarylheptanoid Derivatives Are Biosynthesized via Parallel Routes in <i>Musella lasiocarpa</i>, the Chinese Dwarf Banana.","authors":"Hui Lyu, Lukas Ernst, Yoko Nakamura, Yu Okamura, Tobias G Köllner, Katrin Luck, Benye Liu, Yu Chen, Ludger Beerhues, Jonathan Gershenzon, Christian Paetz","doi":"10.1021/acs.orglett.4c01750","DOIUrl":"10.1021/acs.orglett.4c01750","url":null,"abstract":"<p><p>Here, we use transcriptomic data from seeds of <i>Musella lasiocarpa</i> to identify five enzymes involved in the formation of dihydrocurcuminoids. Characterization of the substrate specificities of the enzymes reveals two distinct dihydrocurcuminoid pathways leading to phenylphenalenones and linear diarylheptanoid derivatives, the major seed metabolites. Furthermore, we demonstrate the stepwise conversion of dihydrobisdemethoxycurcumin to the phenylphenalenone 4'-hydroxylachnanthocarpone by feeding intermediates to <i>M. lasiocarpa</i> root protein extract.</p>","PeriodicalId":54,"journal":{"name":"Organic Letters","volume":null,"pages":null},"PeriodicalIF":4.9,"publicationDate":"2024-07-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141430946","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Enantioselective Synthesis of β-l-5-[(E)-2-Bromovinyl)-1-((2S,4S)-2-(hydroxymethyl)-1,3-(dioxolane-4-yl) Uracil)] (l-BHDU) via Chiral Pure l-Dioxolane. 通过手性纯 l-二氧戊环对β-l-5-[(E)-2-溴乙烯基)-1-((2S,4S)-2-(羟甲基)-1,3-(二氧戊环-4-基)Uracil)] (l-BHDU) 进行对映选择性合成。
IF 3.3 2区 化学 Q1 CHEMISTRY, ORGANIC Pub Date : 2024-07-05 Epub Date: 2024-06-20 DOI: 10.1021/acs.joc.4c00399
Yugandhar Kothapalli, Chung K Chu, Uma S Singh

β-l-5-((E)-2-Bromovinyl)-1-((2S,4S)-2-(hydroxymethyl)-1,3-(dioxolane-4-yl) uracil (l-BHDU, 17) is a potent and selective inhibitor of the varicella-zoster virus (VZV). l-BHDU (17) has demonstrated excellent anti-VZV activity and is a preclinical candidate to treat chickenpox, shingles (herpes zoster), and herpes simplex virus 1 (HSV-1) infections. Its monophosphate prodrug (POM-l-BHDU-MP, 24) demonstrated an enhanced pharmacokinetic and antiviral profile. POM-l-BHDU-MP (24), in vivo, effectively reduced the VZV viral load and was effective for the topical treatment of VZV and HSV-1 infections. Therefore, a viable synthetic procedure for developing POM-l-BHDU-MP (24) is needed. In this article, an efficient approach for the synthesis of l-BHDU (17) from a readily available starting material is described in 7 steps. An efficient and practical methodology for both chiral pure l- & d-dioxolane 11 and 13 were developed via diastereomeric chiral amine salt formation. Neutralization of the amine carboxylate salt of l-dioxolane 10 provides enantiomerically pure l-dioxane 11 (ee ≥ 99%). Optically pure 11 was utilized to construct the final nucleoside l-BHDU (17) and its monophosphate ester prodrug (POM-l-BHDU-MP, 24). Notably, the reported process eliminates expensive chiral chromatography for the synthesis of chiral pure l- & d-dioxolane, which offers avenues for the development and structure-activity relationship studies of l- & d-dioxolane-derived nucleosides.

β-l-5-((E)-2-溴乙烯基)-1-((2S,4S)-2-(羟甲基)-1,3-(二氧戊环-4-基)脲嘧啶(l-BHDU,17)是一种强效的水痘-带状疱疹病毒(VZV)选择性抑制剂。l-BHDU (17) 具有出色的抗 VZV 活性,是治疗水痘、带状疱疹和单纯疱疹病毒 1 (HSV-1) 感染的临床前候选药物。它的单磷酸盐原药(POM-l-BHDU-MP,24)显示出更强的药代动力学和抗病毒特性。在体内,POM-l-BHDU-MP(24)能有效降低 VZV 病毒载量,并能有效用于 VZV 和 HSV-1 感染的局部治疗。因此,需要一种可行的合成方法来开发 POM-l-BHDU-MP (24)。本文介绍了一种高效的方法,通过 7 个步骤从一种容易获得的起始材料合成 l-BHDU (17)。通过非对映手性胺盐的形成,我们开发出了一种高效实用的方法来合成手性纯 l- 和 d-二氧戊环 11 和 13。中和 l-二氧戊环 10 的羧酸胺盐可得到对映体纯的 l-二氧戊环 11(ee ≥ 99%)。光学纯的 11 被用来构建最终的核苷 l-BHDU(17)及其单磷酸酯原药(POM-l-BHDU-MP,24)。值得注意的是,所报道的工艺省去了合成手性纯 l- & d-二氧戊环的昂贵的手性色谱法,这为 l- & d-二氧戊环衍生核苷的开发和结构-活性关系研究提供了途径。
{"title":"Enantioselective Synthesis of β-l-5-[(<i>E</i>)-2-Bromovinyl)-1-((2<i>S</i>,4<i>S</i>)-2-(hydroxymethyl)-1,3-(dioxolane-4-yl) Uracil)] (l-BHDU) <i>via</i> Chiral Pure l-Dioxolane.","authors":"Yugandhar Kothapalli, Chung K Chu, Uma S Singh","doi":"10.1021/acs.joc.4c00399","DOIUrl":"10.1021/acs.joc.4c00399","url":null,"abstract":"<p><p>β-l-5-((<i>E</i>)-2-Bromovinyl)-1-((2<i>S</i>,4<i>S</i>)-2-(hydroxymethyl)-1,3-(dioxolane-4-yl) uracil (l-BHDU, <b>17</b>) is a potent and selective inhibitor of the varicella-zoster virus (VZV). l-BHDU (<b>17</b>) has demonstrated excellent <i>anti</i>-VZV activity and is a preclinical candidate to treat chickenpox, shingles (herpes zoster), and herpes simplex virus 1 (HSV-1) infections. Its monophosphate prodrug (POM-l-BHDU-MP, <b>24</b>) demonstrated an enhanced pharmacokinetic and antiviral profile. POM-l-BHDU-MP (<b>24</b>), <i>in vivo</i>, effectively reduced the VZV viral load and was effective for the topical treatment of VZV and HSV-1 infections. Therefore, a viable synthetic procedure for developing POM-l-BHDU-MP (<b>24</b>) is needed. In this article, an efficient approach for the synthesis of l-BHDU (<b>17</b>) from a readily available starting material is described in 7 steps. An efficient and practical methodology for both chiral pure l- & d-dioxolane <b>11</b> and <b>13</b> were developed <i>via</i> diastereomeric chiral amine salt formation. Neutralization of the amine carboxylate salt of l-dioxolane <b>10</b> provides enantiomerically pure l-dioxane <b>11</b> (ee ≥ 99%). Optically pure <b>11</b> was utilized to construct the final nucleoside l-BHDU (<b>17</b>) and its monophosphate ester prodrug (POM-l-BHDU-MP, <b>24</b>). Notably, the reported process eliminates expensive chiral chromatography for the synthesis of chiral pure l- & d-dioxolane, which offers avenues for the development and structure-activity relationship studies of l- & d-dioxolane-derived nucleosides.</p>","PeriodicalId":57,"journal":{"name":"The Journal of Organic Chemistry","volume":null,"pages":null},"PeriodicalIF":3.3,"publicationDate":"2024-07-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141430954","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Stereoselective Access to Diverse Alkaloid-Like Scaffolds via an Oxidation/Double-Mannich Reaction Sequence. 通过氧化/双曼尼希反应序列立体选择性地获得多种类烯酮支架。
IF 4.9 1区 化学 Q1 CHEMISTRY, ORGANIC Pub Date : 2024-07-05 Epub Date: 2024-06-21 DOI: 10.1021/acs.orglett.4c01924
Charles P Mikan, Joseph O Watson, Ryan Walton, Paul G Waddell, Jonathan P Knowles

Sequential oxidative cleavage and double-Mannich reactions enable the stereoselective conversion of simple norbornenes into complex alkaloid-like structures. The products undergo a wide range of derivatization reactions, including regioselective enol triflate formation/cross-coupling sequences and highly efficient conversion to an unusual tricyclic 8,5,5-fused lactam. Overall, the process represents a formal one-atom aza-ring expansion with concomitant bridging annulation, making it of interest for the broader derivatization of alkene feedstocks.

通过顺序氧化裂解和双曼尼希反应,可以将简单的降冰片烯立体选择性地转化为复杂的类生物碱结构。产物经过一系列广泛的衍生反应,包括具有区域选择性的烯醇三酸酯形成/交叉耦合序列,以及高效转化为不常见的三环 8,5,5 熔合内酰胺。总体而言,该过程代表了一种正式的一原子偶氮环扩展,同时伴有桥环化,因此对更广泛的烯烃原料衍生化具有重要意义。
{"title":"Stereoselective Access to Diverse Alkaloid-Like Scaffolds via an Oxidation/Double-Mannich Reaction Sequence.","authors":"Charles P Mikan, Joseph O Watson, Ryan Walton, Paul G Waddell, Jonathan P Knowles","doi":"10.1021/acs.orglett.4c01924","DOIUrl":"10.1021/acs.orglett.4c01924","url":null,"abstract":"<p><p>Sequential oxidative cleavage and double-Mannich reactions enable the stereoselective conversion of simple norbornenes into complex alkaloid-like structures. The products undergo a wide range of derivatization reactions, including regioselective enol triflate formation/cross-coupling sequences and highly efficient conversion to an unusual tricyclic 8,5,5-fused lactam. Overall, the process represents a formal one-atom aza-ring expansion with concomitant bridging annulation, making it of interest for the broader derivatization of alkene feedstocks.</p>","PeriodicalId":54,"journal":{"name":"Organic Letters","volume":null,"pages":null},"PeriodicalIF":4.9,"publicationDate":"2024-07-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141436458","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Gold-Catalyzed C-N Cross-Coupling Reactions of Aryl Iodides with Alkyl Nitriles or Silver Cyanate. 金催化的芳基碘化物与烷基腈或氰酸银的 C-N 交叉偶联反应。
IF 4.9 1区 化学 Q1 CHEMISTRY, ORGANIC Pub Date : 2024-07-05 Epub Date: 2024-06-24 DOI: 10.1021/acs.orglett.4c01538
Hongyan Liu, Bo Xu

We have gold-catalyzed C-N cross-couplings of aryl iodides with aliphatic nitriles. Although nitriles are usually challenging nitrogen cross-coupling partners, they could be activated by base-mediated deprotonation and isomerization. The method utilizes widely available substrates in moderate to good yields to provide various N-aryl compounds. In addition, a similar strategy could be extended to the cross-couplings of aryl iodides with silver cyanate. The protocol features high humidity/air tolerance and works inter- and intramolecularly.

我们用金催化了芳基碘化物与脂肪族腈的 C-N 交叉偶联反应。虽然腈类通常是具有挑战性的氮交叉偶联伙伴,但它们可以通过碱介导的去质子化和异构化被激活。该方法利用广泛可用的底物,以中等至良好的产率提供各种 N-芳基化合物。此外,类似的策略还可扩展到芳基碘化物与氰酸银的交叉耦合。该方法对湿度/空气的耐受性高,可在分子间和分子内进行。
{"title":"Gold-Catalyzed C-N Cross-Coupling Reactions of Aryl Iodides with Alkyl Nitriles or Silver Cyanate.","authors":"Hongyan Liu, Bo Xu","doi":"10.1021/acs.orglett.4c01538","DOIUrl":"10.1021/acs.orglett.4c01538","url":null,"abstract":"<p><p>We have gold-catalyzed C-N cross-couplings of aryl iodides with aliphatic nitriles. Although nitriles are usually challenging nitrogen cross-coupling partners, they could be activated by base-mediated deprotonation and isomerization. The method utilizes widely available substrates in moderate to good yields to provide various <i>N</i>-aryl compounds. In addition, a similar strategy could be extended to the cross-couplings of aryl iodides with silver cyanate. The protocol features high humidity/air tolerance and works inter- and intramolecularly.</p>","PeriodicalId":54,"journal":{"name":"Organic Letters","volume":null,"pages":null},"PeriodicalIF":4.9,"publicationDate":"2024-07-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141441749","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Ni-Catalyzed Reductive 1,2-Alkylarylation of Alkenes for the Synthesis of Spirocyclic γ-Lactams. 镍催化烯烃的 1,2-烷基芳香化反应以合成螺环 γ-内酰胺。
IF 4.9 1区 化学 Q1 CHEMISTRY, ORGANIC Pub Date : 2024-07-05 Epub Date: 2024-06-24 DOI: 10.1021/acs.orglett.4c01981
James W Pearson, Teh Ren Hou, Jelena Golijanin, Patricia I Stewart, Eun Seo Choi, Alexis L Gabbey, Michael S West, Sophie A L Rousseaux

An intermolecular nickel-catalyzed reductive 1,2-alkylarylation of acrylates with cyclopropylamine NHP esters and aryl iodides is reported. This operationally simple protocol provides direct access to 1-alkylcyclopropylamine scaffolds. The mild conditions are compatible with four-membered α-amino strained rings as well as five- and six-membered ring systems. The products undergo cyclization to access α-arylated spirocyclic γ-lactams─a motif present in several pharmaceuticals.

本研究报告介绍了分子间镍催化的丙烯酸酯与环丙胺 NHP 酯和芳基碘化物的还原性 1,2-烷基芳基化反应。这种操作简单的方案可直接获得 1-烷基环丙胺支架。温和的条件与四元α-氨基窄环以及五元和六元环系统兼容。这些产物经过环化反应后,可获得α-芳基化的螺环γ-内酰胺--一种存在于多种药物中的主题。
{"title":"Ni-Catalyzed Reductive 1,2-Alkylarylation of Alkenes for the Synthesis of Spirocyclic γ-Lactams.","authors":"James W Pearson, Teh Ren Hou, Jelena Golijanin, Patricia I Stewart, Eun Seo Choi, Alexis L Gabbey, Michael S West, Sophie A L Rousseaux","doi":"10.1021/acs.orglett.4c01981","DOIUrl":"10.1021/acs.orglett.4c01981","url":null,"abstract":"<p><p>An intermolecular nickel-catalyzed reductive 1,2-alkylarylation of acrylates with cyclopropylamine NHP esters and aryl iodides is reported. This operationally simple protocol provides direct access to 1-alkylcyclopropylamine scaffolds. The mild conditions are compatible with four-membered α-amino strained rings as well as five- and six-membered ring systems. The products undergo cyclization to access α-arylated spirocyclic γ-lactams─a motif present in several pharmaceuticals.</p>","PeriodicalId":54,"journal":{"name":"Organic Letters","volume":null,"pages":null},"PeriodicalIF":4.9,"publicationDate":"2024-07-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141445519","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mild Photochemical Reduction of Alkenes and Heterocycles via Thiol-Mediated Formate Activation. 通过硫醇介导的甲酸酯活化对烯和杂环进行温和的光化学还原。
IF 4.9 1区 化学 Q1 CHEMISTRY, ORGANIC Pub Date : 2024-07-05 Epub Date: 2024-06-24 DOI: 10.1021/acs.orglett.4c01894
Carter U Brzezinski, Andrew R LeBlanc, Madeline G Clerici, William M Wuest

The reduction of alkenes to their respective alkanes is one of the most important transformations in organic chemistry, given the abundance of natural and commercial olefins. Metal-catalyzed hydrogenation is the most common way to reduce alkenes; however, the use of H2 gas in combination with the precious metals required for these conditions can be impractical, dangerous, and expensive. More complex substrates often require extremely high pressures of H2, further emphasizing the safety concerns associated with these hydrogenation reactions. Here we report a safe, cheap, and practical photochemical alkene reduction using a readily available organophotocatalyst, catalytic thiol, and formate. These conditions reduce a variety of di-, tri-, and tetra-substituted alkenes in good yield as well as dearomatize pharmaceutically relevant heterocycles to generate sp3-rich isosteres of benzofurans and indoles. These formal-hydrogenation conditions tolerate a broad range of functionalities that would otherwise be sensitive to typical hydrogenations and are likely to be important for industry applications.

鉴于天然烯烃和商用烯烃的丰富性,将烯烃还原成相应的烷烃是有机化学中最重要的转化之一。金属催化氢化是还原烯烃的最常见方法;然而,在这些条件下使用 H2 气体和贵金属可能是不切实际、危险和昂贵的。更复杂的底物通常需要极高压力的 H2,这进一步强调了与这些氢化反应相关的安全问题。在此,我们报告了一种安全、廉价、实用的光化学烯烃还原反应,使用的是一种现成的有机光催化剂、催化硫醇和甲酸盐。这些条件能以良好的收率还原各种二、三和四取代的烯烃,并能脱芳烃生成富含 sp3 的苯并呋喃和吲哚异甾烷。这些形式氢化条件可容许多种官能团,否则这些官能团会对典型的氢化反应敏感,因此很可能在工业应用中发挥重要作用。
{"title":"Mild Photochemical Reduction of Alkenes and Heterocycles via Thiol-Mediated Formate Activation.","authors":"Carter U Brzezinski, Andrew R LeBlanc, Madeline G Clerici, William M Wuest","doi":"10.1021/acs.orglett.4c01894","DOIUrl":"10.1021/acs.orglett.4c01894","url":null,"abstract":"<p><p>The reduction of alkenes to their respective alkanes is one of the most important transformations in organic chemistry, given the abundance of natural and commercial olefins. Metal-catalyzed hydrogenation is the most common way to reduce alkenes; however, the use of H<sub>2</sub> gas in combination with the precious metals required for these conditions can be impractical, dangerous, and expensive. More complex substrates often require extremely high pressures of H<sub>2</sub>, further emphasizing the safety concerns associated with these hydrogenation reactions. Here we report a safe, cheap, and practical photochemical alkene reduction using a readily available organophotocatalyst, catalytic thiol, and formate. These conditions reduce a variety of di-, tri-, and tetra-substituted alkenes in good yield as well as dearomatize pharmaceutically relevant heterocycles to generate sp<sup>3</sup>-rich isosteres of benzofurans and indoles. These formal-hydrogenation conditions tolerate a broad range of functionalities that would otherwise be sensitive to typical hydrogenations and are likely to be important for industry applications.</p>","PeriodicalId":54,"journal":{"name":"Organic Letters","volume":null,"pages":null},"PeriodicalIF":4.9,"publicationDate":"2024-07-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141445518","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Online Mixed-Bed Ion Exchange Chromatography for Native Top-Down Proteomics of Complex Mixtures. 用于复杂混合物原生自上而下蛋白质组学的在线混合床离子交换色谱法
IF 3.8 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-07-05 Epub Date: 2024-06-24 DOI: 10.1021/acs.jproteome.4c00430
Matthew S Fischer, Holden T Rogers, Emily A Chapman, Hsin-Ju Chan, Boris Krichel, Zhan Gao, Eli J Larson, Ying Ge

Native top-down mass spectrometry (nTDMS) allows characterization of protein structure and noncovalent interactions with simultaneous sequence mapping and proteoform characterization. The majority of nTDMS studies utilize purified recombinant proteins, with significant challenges hindering application to endogenous systems. To perform native top-down proteomics (nTDP), where endogenous proteins from complex biological systems are analyzed by nTDMS, it is essential to separate proteins under nondenaturing conditions. However, it remains difficult to achieve high resolution with MS-compatible online chromatography while preserving protein tertiary structure and noncovalent interactions. Herein, we report the use of online mixed-bed ion exchange chromatography (IEC) to enable separation of endogenous proteins from complex mixtures under nondenaturing conditions, preserving noncovalent interactions for nTDP analysis. We have successfully detected large proteins (>146 kDa) and identified endogenous metal-binding and oligomeric protein complexes in human heart tissue lysate. The use of a mixed-bed stationary phase allowed retention and elution of proteins over a wide range of isoelectric points without altering the sample or mobile phase pH. Overall, our method provides a simple online IEC-MS platform that can effectively separate proteins from complex mixtures under nondenaturing conditions and preserve higher-order structure for nTDP applications.

原生自上而下质谱法(nTDMS)可对蛋白质结构和非共价相互作用进行表征,并同时进行序列制图和蛋白质形态表征。大多数 nTDMS 研究都是利用纯化的重组蛋白,在内源系统中的应用面临重大挑战。要执行原生自上而下蛋白质组学(nTDP),即利用 nTDMS 分析复杂生物系统中的内源蛋白质,必须在非变性条件下分离蛋白质。然而,在保留蛋白质三级结构和非共价相互作用的同时,使用与 MS 兼容的在线色谱法实现高分辨率仍然很困难。在此,我们报告了使用在线混合床离子交换色谱(IEC)在非固化条件下从复杂混合物中分离内源蛋白质,同时保留非共价相互作用以进行 nTDP 分析的情况。我们成功地检测到了人体心脏组织裂解物中的大蛋白(>146 kDa),并鉴定出了内源性金属结合蛋白和寡聚蛋白复合物。混合床固定相的使用使蛋白质在广泛的等电点范围内得以保留和洗脱,而无需改变样品或流动相的 pH 值。总之,我们的方法提供了一个简单的在线 IEC-MS 平台,可在非变性条件下从复杂混合物中有效分离蛋白质,并为 nTDP 应用保留高阶结构。
{"title":"Online Mixed-Bed Ion Exchange Chromatography for Native Top-Down Proteomics of Complex Mixtures.","authors":"Matthew S Fischer, Holden T Rogers, Emily A Chapman, Hsin-Ju Chan, Boris Krichel, Zhan Gao, Eli J Larson, Ying Ge","doi":"10.1021/acs.jproteome.4c00430","DOIUrl":"10.1021/acs.jproteome.4c00430","url":null,"abstract":"<p><p>Native top-down mass spectrometry (nTDMS) allows characterization of protein structure and noncovalent interactions with simultaneous sequence mapping and proteoform characterization. The majority of nTDMS studies utilize purified recombinant proteins, with significant challenges hindering application to endogenous systems. To perform native top-down proteomics (nTDP), where endogenous proteins from complex biological systems are analyzed by nTDMS, it is essential to separate proteins under nondenaturing conditions. However, it remains difficult to achieve high resolution with MS-compatible online chromatography while preserving protein tertiary structure and noncovalent interactions. Herein, we report the use of online mixed-bed ion exchange chromatography (IEC) to enable separation of endogenous proteins from complex mixtures under nondenaturing conditions, preserving noncovalent interactions for nTDP analysis. We have successfully detected large proteins (>146 kDa) and identified endogenous metal-binding and oligomeric protein complexes in human heart tissue lysate. The use of a mixed-bed stationary phase allowed retention and elution of proteins over a wide range of isoelectric points without altering the sample or mobile phase pH. Overall, our method provides a simple online IEC-MS platform that can effectively separate proteins from complex mixtures under nondenaturing conditions and preserve higher-order structure for nTDP applications.</p>","PeriodicalId":48,"journal":{"name":"Journal of Proteome Research","volume":null,"pages":null},"PeriodicalIF":3.8,"publicationDate":"2024-07-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141445575","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Balancing Reactivity, Regioselectivity, and Product Stability in Ir-Catalyzed Ortho-C-H Borylations of Anilines by Modulating the Diboron Partner. 通过调节二硼伙伴平衡 Ir 催化苯胺正交-C-H硼烷基化反应的反应性、区域选择性和产物稳定性。
IF 4.9 1区 化学 Q1 CHEMISTRY, ORGANIC Pub Date : 2024-07-05 Epub Date: 2024-06-26 DOI: 10.1021/acs.orglett.4c01495
Jose R Montero Bastidas, Anshu Yadav, Seokjoo Lee, Behnaz Ghaffari, Milton R Smith, Robert E Maleczka

Ir-catalyzed arene C-H borylations (CHB) of anilines can be highly ortho selective by using a small B2eg2 (eg = ethane-1,2-diol) as the borylating reagent. Unfortunately, the products are prone to decomposition, and transesterification with pinacol is required prior to isolation. This work offers a solution by adjusting the size of the diboron reagent. Based on our evaluation, we conclude that B2bg2 (bg = butane-1,2-diol) achieves an optimal balance between CHB regioselectivity and stability for the borylated products.

通过使用小型 B2eg2(例如 = 乙烷-1,2-二醇)作为硼化试剂,Ir 催化的苯胺炔 C-H 硼酰化反应(CHB)具有高度的正交选择性。遗憾的是,产物容易分解,在分离之前需要用频哪醇进行酯交换反应。这项研究通过调整二硼试剂的大小提供了一种解决方案。根据我们的评估,我们得出结论:B2bg2(bg = 丁烷-1,2-二醇)在 CHB 的区域选择性和硼化产物的稳定性之间达到了最佳平衡。
{"title":"Balancing Reactivity, Regioselectivity, and Product Stability in Ir-Catalyzed Ortho-C-H Borylations of Anilines by Modulating the Diboron Partner.","authors":"Jose R Montero Bastidas, Anshu Yadav, Seokjoo Lee, Behnaz Ghaffari, Milton R Smith, Robert E Maleczka","doi":"10.1021/acs.orglett.4c01495","DOIUrl":"10.1021/acs.orglett.4c01495","url":null,"abstract":"<p><p>Ir-catalyzed arene C-H borylations (CHB) of anilines can be highly ortho selective by using a small B<sub>2</sub>eg<sub>2</sub> (eg = ethane-1,2-diol) as the borylating reagent. Unfortunately, the products are prone to decomposition, and transesterification with pinacol is required prior to isolation. This work offers a solution by adjusting the size of the diboron reagent. Based on our evaluation, we conclude that B<sub>2</sub>bg<sub>2</sub> (bg = butane-1,2-diol) achieves an optimal balance between CHB regioselectivity and stability for the borylated products.</p>","PeriodicalId":54,"journal":{"name":"Organic Letters","volume":null,"pages":null},"PeriodicalIF":4.9,"publicationDate":"2024-07-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141449103","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
My 50-Plus Years of Academic Research Collaborations with Industry. A Retrospective. 我与产业界 50 多年的学术研究合作。回顾。
IF 3.3 2区 化学 Q1 CHEMISTRY, ORGANIC Pub Date : 2024-07-05 Epub Date: 2024-06-12 DOI: 10.1021/acs.joc.4c00652
Stephen Hanessian

A retrospective is presented highlighting the synthesis of selected "first-in-kind" natural products, their synthetic analogues, structure elucidations, and rationally designed bioactive synthetic compounds that were accomplished because of collaborations with past and present pharmaceutical and agrochemical companies. Medicinal chemistry projects involving structure-based design exploiting cocrystal structures of small molecules with biologically relevant enzymes, receptors, and bacterial ribosomes with synthetic small molecules leading to marketed products, clinical candidates, and novel drug prototypes were realized in collaboration. Personal reflections, historical insights, behind the scenes stories from various long-term projects are shared in this retrospective article.

本报告回顾了与过去和现在的制药和农用化学品公司合作完成的部分 "首创 "天然产品的合成、其合成类似物、结构阐明以及合理设计的生物活性合成化合物。药物化学项目涉及以结构为基础的设计,利用小分子与生物相关酶、受体和细菌核糖体的共晶体结构,并与合成小分子合作,最终实现了上市产品、临床候选药物和新型药物原型。在这篇回顾性文章中,我们将与大家分享各种长期项目的个人反思、历史见解和幕后故事。
{"title":"My 50-Plus Years of Academic Research Collaborations with Industry. A Retrospective.","authors":"Stephen Hanessian","doi":"10.1021/acs.joc.4c00652","DOIUrl":"10.1021/acs.joc.4c00652","url":null,"abstract":"<p><p>A retrospective is presented highlighting the synthesis of selected \"first-in-kind\" natural products, their synthetic analogues, structure elucidations, and rationally designed bioactive synthetic compounds that were accomplished because of collaborations with past and present pharmaceutical and agrochemical companies. Medicinal chemistry projects involving structure-based design exploiting cocrystal structures of small molecules with biologically relevant enzymes, receptors, and bacterial ribosomes with synthetic small molecules leading to marketed products, clinical candidates, and novel drug prototypes were realized in collaboration. Personal reflections, historical insights, behind the scenes stories from various long-term projects are shared in this retrospective article.</p>","PeriodicalId":57,"journal":{"name":"The Journal of Organic Chemistry","volume":null,"pages":null},"PeriodicalIF":3.3,"publicationDate":"2024-07-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141304881","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Fragment-Based Design and Synthesis of Symmetrical bis-Peptidotriazoles Using Alkylidene bis-Amide Formations and Subsequent Triazole Ligation with β-Acetamido Carbonyl Scaffolds. 利用亚烷基双酰胺形成并随后与 β-乙酰氨基羰基支架进行三唑连接,基于片段设计和合成对称双肽三唑。
IF 3.3 2区 化学 Q1 CHEMISTRY, ORGANIC Pub Date : 2024-07-05 Epub Date: 2024-06-12 DOI: 10.1021/acs.joc.3c02769
Sini K S, Arun S, Shinu V S

A novel and efficient fragment-based assembly of symmetrical bis-peptidotraizoles has been developed based on double Sharpless azide-alkyne click chemistry. A new Cu(II) catalyzed protocol with a wide substrate scope was developed for accessing the symmetrical alkylidene bis-azidoamide fragment that yields the products in very good yields at room temperature without employing column purifications. The propargylated β-acetamido ketone fragment was accessed using another Cu(II) catalyzed room temperature MCR protocol. A fast double-click reaction (2 h) of symmetrical alkylidene bis-azidoamides with propargylated β-acetamido ketone fragments leads to the formation of unusual symmetrical bis-peptidotriazoles.

基于双 Sharpless 叠氮-炔烃点击化学,开发了一种基于片段的对称双肽四唑新颖高效的组装方法。研究人员开发了一种新的 Cu(II) 催化方案,该方案具有广泛的底物范围,可用于获得对称的亚烷基双叠氮酰胺片段,在室温下即可获得产率极高的产品,无需进行柱纯化。使用另一种 Cu(II) 催化的室温 MCR 方案获得了丙炔化的β-乙酰氨基酮片段。对称亚烷基双叠氮酰胺与丙炔化 β-乙酰氨基酮片段的快速双击反应(2 小时)可生成不寻常的对称双肽三唑。
{"title":"Fragment-Based Design and Synthesis of Symmetrical <i>bis</i>-Peptidotriazoles Using Alkylidene <i>bis</i>-Amide Formations and Subsequent Triazole Ligation with β-Acetamido Carbonyl Scaffolds.","authors":"Sini K S, Arun S, Shinu V S","doi":"10.1021/acs.joc.3c02769","DOIUrl":"10.1021/acs.joc.3c02769","url":null,"abstract":"<p><p>A novel and efficient fragment-based assembly of symmetrical <i>bis</i>-peptidotraizoles has been developed based on double Sharpless azide-alkyne click chemistry. A new Cu(II) catalyzed protocol with a wide substrate scope was developed for accessing the symmetrical alkylidene <i>bis-</i>azidoamide fragment that yields the products in very good yields at room temperature without employing column purifications. The propargylated β-acetamido ketone fragment was accessed using another Cu(II) catalyzed room temperature MCR protocol. A fast double-click reaction (2 h) of symmetrical alkylidene <i>bis-</i>azidoamides with propargylated β-acetamido ketone fragments leads to the formation of unusual symmetrical <i>bis</i>-peptidotriazoles.</p>","PeriodicalId":57,"journal":{"name":"The Journal of Organic Chemistry","volume":null,"pages":null},"PeriodicalIF":3.3,"publicationDate":"2024-07-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141309639","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1