Pub Date : 2025-02-02DOI: 10.1021/acs.accounts.4c00804
Manuel Alcarazo
ConspectusDuring the past few years, the interest among organic synthesis practitioners in the use of sulfonium salts has exponentially growth. This can arguably be attributed to a series of specific factors: (a) The recent development of more direct and efficient protocols for the synthesis of these species, which make sulfonium reagents of a wide structural variety easily available in multigram scale. (b) The recognition that the reactivity of these salts resembles that of hypervalent iodine compounds, and therefore, they can be used as effective replacement of such species in most of their applications. (c) Their intrinsic thermal stability and tolerance to air and moisture, which clearly surpass that of I(III)-reagents of analogue reactivity, and facilitate their purification, isolation as well-defined species, storage, and safely handling on larger scale. (d) Finally, the possibility to further functionalize sulfonium salts once the sulfur-containing platform has been incorporated. Specifically, this last synthetic approach is not trivial when working with hypervalent I(III)-species and facilitates the access to sulfonium salts with no counterpart in the I(III) realm.This renewed interest in sulfonium salts has led to the improvement of already existing transformations as well as to the discovery of unprecedented ones; in particular, by the development of protocols that incorporate sulfonium salts as partners in traditional cross-coupling and C-H activation steps or combine them with more modern technologies such as photocatalysis or electrosynthesis. In this Account, the reactivity of a series of sulfonium salts originally prepared in our laboratory will be outlined and compared to their I(III)-counterparts. Some of these reagents are now commercially available, and their use has started to spread widely across the synthetic chemistry community, helping to speed the process of identification of potentially bioactive products or new functionaliced materials. However, challenges still remain. The development of sulfonium reagents characterized by an optimal balance between reactivity and site-selectivity, or showing broader compatibility toward sensitive functional groups is still a need. In addition, the intrinsic stability of sulfonium salts often makes necessary the use of (sophisticated) catalysts that activate the latent reactivity hidden in their structures. Although a priori one can see this fact as a disadvantage, it might actually be decisive to harvest the full synthetic potential of sulfonium salts because their thermal stability will surely facilitate the preparation of operational reagents with no counterpart in the context of I(III)-chemistry. If this becomes true, sulfonium salts may contribute to the expediting of retrosynthetic disconnections that, to date, are impossible.
{"title":"Dibenzothiophenium Salts: Practical Alternatives to Hypervalent I(III)-Based Reagents.","authors":"Manuel Alcarazo","doi":"10.1021/acs.accounts.4c00804","DOIUrl":"https://doi.org/10.1021/acs.accounts.4c00804","url":null,"abstract":"<p><p>ConspectusDuring the past few years, the interest among organic synthesis practitioners in the use of sulfonium salts has exponentially growth. This can arguably be attributed to a series of specific factors: (a) The recent development of more direct and efficient protocols for the synthesis of these species, which make sulfonium reagents of a wide structural variety easily available in multigram scale. (b) The recognition that the reactivity of these salts resembles that of hypervalent iodine compounds, and therefore, they can be used as effective replacement of such species in most of their applications. (c) Their intrinsic thermal stability and tolerance to air and moisture, which clearly surpass that of I(III)-reagents of analogue reactivity, and facilitate their purification, isolation as well-defined species, storage, and safely handling on larger scale. (d) Finally, the possibility to further functionalize sulfonium salts once the sulfur-containing platform has been incorporated. Specifically, this last synthetic approach is not trivial when working with hypervalent I(III)-species and facilitates the access to sulfonium salts with no counterpart in the I(III) realm.This renewed interest in sulfonium salts has led to the improvement of already existing transformations as well as to the discovery of unprecedented ones; in particular, by the development of protocols that incorporate sulfonium salts as partners in traditional cross-coupling and C-H activation steps or combine them with more modern technologies such as photocatalysis or electrosynthesis. In this Account, the reactivity of a series of sulfonium salts originally prepared in our laboratory will be outlined and compared to their I(III)-counterparts. Some of these reagents are now commercially available, and their use has started to spread widely across the synthetic chemistry community, helping to speed the process of identification of potentially bioactive products or new functionaliced materials. However, challenges still remain. The development of sulfonium reagents characterized by an optimal balance between reactivity and site-selectivity, or showing broader compatibility toward sensitive functional groups is still a need. In addition, the intrinsic stability of sulfonium salts often makes necessary the use of (sophisticated) catalysts that activate the latent reactivity hidden in their structures. Although <i>a priori</i> one can see this fact as a disadvantage, it might actually be decisive to harvest the full synthetic potential of sulfonium salts because their thermal stability will surely facilitate the preparation of operational reagents with no counterpart in the context of I(III)-chemistry. If this becomes true, sulfonium salts may contribute to the expediting of retrosynthetic disconnections that, to date, are impossible.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":" ","pages":""},"PeriodicalIF":16.4,"publicationDate":"2025-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143077851","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-02-02DOI: 10.1021/acs.jpcb.4c07144
Abdul Majid, Sanjeev Garg
Abnormal amyloid beta (Aβ) aggregation in the form of plaques and its deposition across the human nerve cells are a major hallmark of Alzheimer's disease. Aβ aggregation dynamics and, more importantly, various drugs' effects, either to inhibit the fibril aggregation or to degrade the mature fibrils, have been an area of active research. Large molecule (peptide-based) inhibitors, such as decapeptide (RYYAAFFARR) and pentapeptide (LPFFD), show inhibition/degradation effects on amyloid beta fibrils. Herein, a mathematical model has been proposed. The model simulates Aβ aggregation and inhibitory/degradative action of peptide inhibitors on Aβ fibrillation. Model parameters are tuned by curve fitting the experimental data. The tuned model is used to predict experimental data at different initial dose/fibril concentrations. Model predicted results are observed to be in good agreement with the reported experimental data, demonstrating model's applicability at the molecular level. Sensitivity analyses of the model parameters on the fibril concentration further establish the robustness of the proposed model.
{"title":"Inhibition and Degradation of Amyloid Beta Fibrils by Peptide Inhibitors.","authors":"Abdul Majid, Sanjeev Garg","doi":"10.1021/acs.jpcb.4c07144","DOIUrl":"https://doi.org/10.1021/acs.jpcb.4c07144","url":null,"abstract":"<p><p>Abnormal amyloid beta (Aβ) aggregation in the form of plaques and its deposition across the human nerve cells are a major hallmark of Alzheimer's disease. Aβ aggregation dynamics and, more importantly, various drugs' effects, either to inhibit the fibril aggregation or to degrade the mature fibrils, have been an area of active research. Large molecule (peptide-based) inhibitors, such as decapeptide (RYYAAFFARR) and pentapeptide (LPFFD), show inhibition/degradation effects on amyloid beta fibrils. Herein, a mathematical model has been proposed. The model simulates Aβ aggregation and inhibitory/degradative action of peptide inhibitors on Aβ fibrillation. Model parameters are tuned by curve fitting the experimental data. The tuned model is used to predict experimental data at different initial dose/fibril concentrations. Model predicted results are observed to be in good agreement with the reported experimental data, demonstrating model's applicability at the molecular level. Sensitivity analyses of the model parameters on the fibril concentration further establish the robustness of the proposed model.</p>","PeriodicalId":60,"journal":{"name":"The Journal of Physical Chemistry B","volume":" ","pages":""},"PeriodicalIF":2.8,"publicationDate":"2025-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143077974","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-02-01Epub Date: 2022-10-31DOI: 10.1177/0306624X221132998
Branna Humphrey, Bradley D Edwards, Jennifer Pealer
Previous research has established that juveniles who experience negative parental influence are more likely to engage in problem and offending behavior. Less attention has been given to the possibility that criminal thinking styles might partially explain this relationship. This study examined the negative parental influences and criminal thinking styles of 1,354 juvenile offenders to establish that both negative parental influences and criminal thinking are significantly associated with juvenile problem and offending behavior. Further, the analysis showed that juvenile criminal thinking (proactive, reactive, and general) might mediate the relationship between negative parental influences and problem behavior. Implications for such findings are discussed.
{"title":"The Role of Negative Parental Influences and Criminal Thinking in Juvenile Offending Behaviors.","authors":"Branna Humphrey, Bradley D Edwards, Jennifer Pealer","doi":"10.1177/0306624X221132998","DOIUrl":"10.1177/0306624X221132998","url":null,"abstract":"<p><p>Previous research has established that juveniles who experience negative parental influence are more likely to engage in problem and offending behavior. Less attention has been given to the possibility that criminal thinking styles might partially explain this relationship. This study examined the negative parental influences and criminal thinking styles of 1,354 juvenile offenders to establish that both negative parental influences and criminal thinking are significantly associated with juvenile problem and offending behavior. Further, the analysis showed that juvenile criminal thinking (proactive, reactive, and general) might mediate the relationship between negative parental influences and problem behavior. Implications for such findings are discussed.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":" ","pages":"170-183"},"PeriodicalIF":16.4,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40446315","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Background: Spinal dysraphism is characterized by failure of fusion at dorsal midline structures through the embryonic developmental stages. A terminal myelocystocele consists of a skin-covered lumbosacral spina bifida and meningocele that directly continuous with the spinal subarachnoid space.
Observation: A 43-year-old woman who was diagnosed at birth with myelocystocele in the lower segments of the lumbar spine. She was not operated in the early stages of life. At the 43th years of her old, during 9-months, the sac began to progressively increase in size. In our initial examination before surgery, an extremely large skin-covered myelocystocele sac was observed in the thoracolumbar with a diameter of approximately 60 * 70 * 40 cm. patient operated and sac repaired. More than 20 liter of cerebrospinal fluid drainaged from cyst during surgery.
Lessons: The mechanism of cyst enlargement is not well understood. Progressive and severe increase in size of unrepaired myelocystocele sac is possible in old ages even without cerebral hydrocephalus.
{"title":"Huge unrepaired myelocystocele, progressive sac enlargement in later stages of life: a case report.","authors":"Hosein Safari, Armin Jahangiri Babadi, Pooyan Alizadeh, Reza Ajudani, Soroor Hamidi","doi":"10.1080/02688697.2022.2118235","DOIUrl":"10.1080/02688697.2022.2118235","url":null,"abstract":"<p><strong>Background: </strong>Spinal dysraphism is characterized by failure of fusion at dorsal midline structures through the embryonic developmental stages. A terminal myelocystocele consists of a skin-covered lumbosacral spina bifida and meningocele that directly continuous with the spinal subarachnoid space.</p><p><strong>Observation: </strong>A 43-year-old woman who was diagnosed at birth with myelocystocele in the lower segments of the lumbar spine. She was not operated in the early stages of life. At the 43th years of her old, during 9-months, the sac began to progressively increase in size. In our initial examination before surgery, an extremely large skin-covered myelocystocele sac was observed in the thoracolumbar with a diameter of approximately 60 * 70 * 40 cm. patient operated and sac repaired. More than 20 liter of cerebrospinal fluid drainaged from cyst during surgery.</p><p><strong>Lessons: </strong>The mechanism of cyst enlargement is not well understood. Progressive and severe increase in size of unrepaired myelocystocele sac is possible in old ages even without cerebral hydrocephalus.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":" ","pages":"84-87"},"PeriodicalIF":16.4,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"33449707","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Most pituitary adenoma/neuroendocrine tumours (PitNET) are histologically benign and grow slowly; however, a subset of these tumours exhibit a more aggressive clinical course characterized by local invasiveness and early recurrence. These high-risk PitNETs often require multiple surgeries and radiation over several years and may eventually acquire carcinomatous characteristics, such as metastasis in some cases. Herein, we report a rare case of PitNET causing oculomotor paresis with extremely rapid recurrence only 3 months after initial surgery, followed by lethal liver metastasis. Preoperative magnetic resonance imaging and intraoperative findings were consistent with typical PitNETs, other than moderate invasion of the cavernous sinus. Pathological examination of the specimen obtained from the initial transsphenoidal surgery revealed increased mitosis and elevated rates of cells positive for Ki-67 and p53. Based on the immunohistochemical assessment for transcription factors and pituitary hormones, the diagnosis was determined to be a silent sparsely granulated corticotroph PitNET with focal malignant transformation. Aggressive features represented by Ki-67 and p53 positivity were more robust in recurrent and metastatic specimens, but hormone immunostaining was decreased. Epigenetic analysis revealed methylation of the telomerase reverse transcriptase (TERT) promoter in the tumour, resulting in TERT upregulation. Despite extensive research, markers for distinguishing extremely aggressive PitNETs have not been determined. Although further analysis is needed, our case demonstrates the possible usefulness of assessing TERT promoter methylation status in the stratification of recurrence risk in extremely high-risk variants of PitNET.
{"title":"A case of aggressive pituitary neuroendocrine tumour with extremely rapid progression: possible diagnostic value of <i>TERT</i> promoter methylation.","authors":"Masamichi Endo, Jun-Ichi Adachi, Chiaki Murakami, Chie Inomoto, Miyu Komatsu, Shunya Hanakita, Ken-Ichi Oyama, Akira Matsuno, Ryo Nishikawa, Soichi Oya","doi":"10.1080/02688697.2022.2151564","DOIUrl":"10.1080/02688697.2022.2151564","url":null,"abstract":"<p><p>Most pituitary adenoma/neuroendocrine tumours (PitNET) are histologically benign and grow slowly; however, a subset of these tumours exhibit a more aggressive clinical course characterized by local invasiveness and early recurrence. These high-risk PitNETs often require multiple surgeries and radiation over several years and may eventually acquire carcinomatous characteristics, such as metastasis in some cases. Herein, we report a rare case of PitNET causing oculomotor paresis with extremely rapid recurrence only 3 months after initial surgery, followed by lethal liver metastasis. Preoperative magnetic resonance imaging and intraoperative findings were consistent with typical PitNETs, other than moderate invasion of the cavernous sinus. Pathological examination of the specimen obtained from the initial transsphenoidal surgery revealed increased mitosis and elevated rates of cells positive for Ki-67 and p53. Based on the immunohistochemical assessment for transcription factors and pituitary hormones, the diagnosis was determined to be a silent sparsely granulated corticotroph PitNET with focal malignant transformation. Aggressive features represented by Ki-67 and p53 positivity were more robust in recurrent and metastatic specimens, but hormone immunostaining was decreased. Epigenetic analysis revealed methylation of the telomerase reverse transcriptase (<i>TERT</i>) promoter in the tumour, resulting in TERT upregulation. Despite extensive research, markers for distinguishing extremely aggressive PitNETs have not been determined. Although further analysis is needed, our case demonstrates the possible usefulness of assessing <i>TERT</i> promoter methylation status in the stratification of recurrence risk in extremely high-risk variants of PitNET.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":" ","pages":"93-99"},"PeriodicalIF":16.4,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"35348694","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-02-01Epub Date: 2022-09-15DOI: 10.1080/02688697.2022.2123892
Yingda Li, Gregory Basil, Steven Vanni
Background: Dropped head syndrome (DHS) is a recently recognised cause of cervical spinal deformity and disability. The combination of Parkinson's disease (PD) and inflammatory myopathy in the genesis of DHS has not been previously reported. Furthermore, the optimal surgical treatment of progressive DHS remains undefined.
Case description: We report the case of a 64-year-old patient with severe DHS and coronal plane deformity secondary to underlying PD, precipitated by a focal paraspinal myositis, successfully corrected using asymmetric sternocleidomastoid (SCM) release and circumferential cervical fusion. The nuances of decision-making in this challenging patient population are highlighted, including the benefits of intraoperative traction, anterior column reconstruction and bicortical screw fixation. Postoperatively, significant reductions in pain and disability were achieved, along with restoration of cervical lordosis (CL), C2-7 sagittal vertical axis (CSVA) and chin-brow vertical angle (CBVA).
Conclusions: Circumferential cervical fusion with concomitant SCM release is a useful option in the treatment of recalcitrant DHS with biplanar deformity, addressing the unique biomechanical and endocrinological challenges posed by patients with underlying PD.
{"title":"Dropped head syndrome in a patient with Parkinson's disease and inflammatory myopathy, treated with sternocleidomastoid release and circumferential cervical fusion.","authors":"Yingda Li, Gregory Basil, Steven Vanni","doi":"10.1080/02688697.2022.2123892","DOIUrl":"10.1080/02688697.2022.2123892","url":null,"abstract":"<p><strong>Background: </strong>Dropped head syndrome (DHS) is a recently recognised cause of cervical spinal deformity and disability. The combination of Parkinson's disease (PD) and inflammatory myopathy in the genesis of DHS has not been previously reported. Furthermore, the optimal surgical treatment of progressive DHS remains undefined.</p><p><strong>Case description: </strong>We report the case of a 64-year-old patient with severe DHS and coronal plane deformity secondary to underlying PD, precipitated by a focal paraspinal myositis, successfully corrected using asymmetric sternocleidomastoid (SCM) release and circumferential cervical fusion. The nuances of decision-making in this challenging patient population are highlighted, including the benefits of intraoperative traction, anterior column reconstruction and bicortical screw fixation. Postoperatively, significant reductions in pain and disability were achieved, along with restoration of cervical lordosis (CL), C2-7 sagittal vertical axis (CSVA) and chin-brow vertical angle (CBVA).</p><p><strong>Conclusions: </strong>Circumferential cervical fusion with concomitant SCM release is a useful option in the treatment of recalcitrant DHS with biplanar deformity, addressing the unique biomechanical and endocrinological challenges posed by patients with underlying PD.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":" ","pages":"104-109"},"PeriodicalIF":16.4,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40360223","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-02-01Epub Date: 2022-09-14DOI: 10.1080/02688697.2022.2120962
Madhav R Patel, Kevin C Jacob, Timothy J Hartman, James W Nie, Jonathan A Myers
While anterior lumbar interbody fusion (ALIF) is known as an established and safe procedure for treatment of degenerative disc disease, albeit rare, the development of postoperative intra-abdominal or retroperitoneal collection of lymph warrants timely diagnosis and management. This study presents the case of a 62-year-old male who underwent L4-L5 and L5-S1 ALIF and developed a persistent left-sided fluid collection, resulting in a symptomatic retroperitoneal lymphocele confirmed by computed tomography (CT). After percutaneous drainage by interventional radiology (IR), output remained high at 1 liter (L) per day, necessitating sclerotherapy with doxycycline and ethanol. In the absence of improvement, a lymphangiogram demonstrating a persistent lymph leak and glue embolization was performed. Due to refractory symptoms, retroperitoneal exploration with methylene blue dye was utilized for lymphatic mapping, and a lymphatic capillary leak in proximity to the left iliac artery was identified and successfully ligated with resolution of symptoms. With suspected fluid collections following ALIF, confirmation with CT or ultrasound (US) imaging followed by percutaneous drainage and testing of fluid is necessary. In mild cases, drainage alone or nonsurgical chemical sclerotherapy may suffice. In symptomatic refractory cases, localization of the site with lymphangiogram or US-guided injection of methylene blue dye allows for easier identification and definitive management with either transabdominal laparoscopic fenestration or retroperitoneal surgical exploration and ligation.
{"title":"Management of lymphocele following anterior lumbar interbody fusion, case report and review of literature.","authors":"Madhav R Patel, Kevin C Jacob, Timothy J Hartman, James W Nie, Jonathan A Myers","doi":"10.1080/02688697.2022.2120962","DOIUrl":"10.1080/02688697.2022.2120962","url":null,"abstract":"<p><p>While anterior lumbar interbody fusion (ALIF) is known as an established and safe procedure for treatment of degenerative disc disease, albeit rare, the development of postoperative intra-abdominal or retroperitoneal collection of lymph warrants timely diagnosis and management. This study presents the case of a 62-year-old male who underwent L4-L5 and L5-S1 ALIF and developed a persistent left-sided fluid collection, resulting in a symptomatic retroperitoneal lymphocele confirmed by computed tomography (CT). After percutaneous drainage by interventional radiology (IR), output remained high at 1 liter (L) per day, necessitating sclerotherapy with doxycycline and ethanol. In the absence of improvement, a lymphangiogram demonstrating a persistent lymph leak and glue embolization was performed. Due to refractory symptoms, retroperitoneal exploration with methylene blue dye was utilized for lymphatic mapping, and a lymphatic capillary leak in proximity to the left iliac artery was identified and successfully ligated with resolution of symptoms. With suspected fluid collections following ALIF, confirmation with CT or ultrasound (US) imaging followed by percutaneous drainage and testing of fluid is necessary. In mild cases, drainage alone or nonsurgical chemical sclerotherapy may suffice. In symptomatic refractory cases, localization of the site with lymphangiogram or US-guided injection of methylene blue dye allows for easier identification and definitive management with either transabdominal laparoscopic fenestration or retroperitoneal surgical exploration and ligation.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":" ","pages":"88-92"},"PeriodicalIF":16.4,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40356795","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-02-01Epub Date: 2022-07-04DOI: 10.1037/met0000504
Antonio R Linero, Qian Zhang
We present a general framework for causal mediation analysis using nonparametric Bayesian methods in the potential outcomes framework. Our model, which we refer to as the Bayesian causal mediation forests model, combines recent advances in Bayesian machine learning using decision tree ensembles, Bayesian nonparametric causal inference, and a Bayesian implementation of the g-formula for computing causal effects. Because of its strong performance on simulated data and because it greatly reduces researcher degrees of freedom, we argue that Bayesian causal mediation forests are highly attractive as a default approach. Of independent interest, we also introduce a new sensitivity analysis technique for mediation analysis with continuous outcomes that is widely applicable. We demonstrate our approach on both simulated and real data sets, and show that our approach obtains low mean squared error and close to nominal coverage of 95% interval estimates, even in highly nonlinear problems on which other methods fail. (PsycInfo Database Record (c) 2025 APA, all rights reserved).
我们提出了一个在潜在结果框架内使用非参数贝叶斯方法进行因果中介分析的一般框架。我们的模型被称为贝叶斯因果中介森林模型(Bayesian causal mediation forests model),它结合了贝叶斯机器学习(使用决策树集合)、贝叶斯非参数因果推断以及计算因果效应的 g 公式的贝叶斯实现等方面的最新进展。由于贝叶斯因果中介森林在模拟数据上的出色表现,以及它大大降低了研究者的自由度,我们认为贝叶斯因果中介森林作为一种默认方法极具吸引力。我们还针对连续结果的中介分析引入了一种新的灵敏度分析技术,该技术具有广泛的适用性,这也是我们感兴趣的一点。我们在模拟数据集和真实数据集上演示了我们的方法,并表明我们的方法即使在其他方法无法解决的高度非线性问题中,也能获得较低的均方误差和接近名义覆盖率的 95% 区间估计值。(PsycInfo Database Record (c) 2022 APA, 版权所有).
{"title":"Mediation analysis using Bayesian tree ensembles.","authors":"Antonio R Linero, Qian Zhang","doi":"10.1037/met0000504","DOIUrl":"10.1037/met0000504","url":null,"abstract":"<p><p>We present a general framework for causal mediation analysis using nonparametric Bayesian methods in the potential outcomes framework. Our model, which we refer to as the Bayesian causal mediation forests model, combines recent advances in Bayesian machine learning using decision tree ensembles, Bayesian nonparametric causal inference, and a Bayesian implementation of the g-formula for computing causal effects. Because of its strong performance on simulated data and because it greatly reduces researcher degrees of freedom, we argue that Bayesian causal mediation forests are highly attractive as a default approach. Of independent interest, we also introduce a new sensitivity analysis technique for mediation analysis with continuous outcomes that is widely applicable. We demonstrate our approach on both simulated and real data sets, and show that our approach obtains low mean squared error and close to nominal coverage of 95% interval estimates, even in highly nonlinear problems on which other methods fail. (PsycInfo Database Record (c) 2025 APA, all rights reserved).</p>","PeriodicalId":7,"journal":{"name":"ACS Applied Polymer Materials","volume":" ","pages":"60-82"},"PeriodicalIF":4.4,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40471012","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-02-01Epub Date: 2022-09-01DOI: 10.1037/met0000525
Eunseong Cho
The current guidelines for estimating reliability recommend using two omega combinations in multidimensional data. One omega is for factor analysis (FA) reliability estimators, and the other omega is for omega hierarchical estimators (i.e., ωh). This study challenges these guidelines. Specifically, the following three questions are asked: (a) Do FA reliability estimators outperform non-FA reliability estimators? (b) Is it always desirable to estimate ωh? (c) What are the best reliability and ωh estimators? This study addresses these issues through a Monte Carlo simulation of reliability and ωh estimators. The conclusions are given as follows. First, the performance differences among most reliability estimators are small, and the performance of FA estimators is comparable to that of non-FA estimators. However, the current, most-recommended estimators, that is, estimators based on the bifactor model and exploratory factor analysis, tend to overestimate reliability. Second, the accuracy of ωh estimators is much lower than that of reliability estimators, so we should perform ωh estimation selectively only on data that meet several requirements. Third, exploratory bifactor analysis is more accurate than confirmatory bifactor analysis only in the presence of cross-loading; otherwise, exploratory bifactor analysis is less accurate than confirmatory bifactor analysis. Fourth, techniques known to improve the Schmid-Leiman (SL) transformation are not superior to SL transformation but have different advantages. This study provides an R Shiny app that allows users to obtain multidimensional reliability and ωh estimates with a few mouse clicks. (PsycInfo Database Record (c) 2025 APA, all rights reserved).
目前的可靠性估计指南建议在多维数据中使用两种欧米茄组合。一个 omega 用于因子分析(FA)可靠性估计,另一个 omega 用于 omega 层次估计(即 ωh)。本研究对这些准则提出了挑战。具体来说,本研究提出了以下三个问题:(a) FA 可靠性估计器是否优于非 FA 可靠性估计器?(b) 估算 ωh 是否总是可取的?(c) 最好的可靠性和 ωh 估计器是什么?本研究通过对可靠性和 ωh 估计器进行蒙特卡罗模拟来解决这些问题。结论如下。首先,大多数可靠性估计器之间的性能差异很小,FA 估计器的性能与非 FA 估计器相当。然而,目前最推荐的估计器,即基于双因子模型和探索性因子分析的估计器,往往会高估可靠性。其次,ωh 估计器的准确度远低于可靠性估计器的准确度,因此我们应该有选择性地只对满足若干要求的数据进行ωh 估计。第三,只有在存在交叉负荷的情况下,探索性双因素分析才比确认性双因素分析更准确;否则,探索性双因素分析就不如确认性双因素分析准确。第四,已知能改进施密德-莱曼(SL)变换的技术并不优于施密德-莱曼变换,而是具有不同的优势。本研究提供了一个 R Shiny 应用程序,用户只需点击几下鼠标,即可获得多维信度和 ωh 估计值。(PsycInfo Database Record (c) 2022 APA, 版权所有)。
{"title":"Reliability and omega hierarchical in multidimensional data: A comparison of various estimators.","authors":"Eunseong Cho","doi":"10.1037/met0000525","DOIUrl":"10.1037/met0000525","url":null,"abstract":"<p><p>The current guidelines for estimating reliability recommend using two omega combinations in multidimensional data. One omega is for factor analysis (FA) reliability estimators, and the other omega is for omega hierarchical estimators (i.e., ω<i><sub>h</sub></i>). This study challenges these guidelines. Specifically, the following three questions are asked: (a) Do FA reliability estimators outperform non-FA reliability estimators? (b) Is it always desirable to estimate ω<i><sub>h</sub></i>? (c) What are the best reliability and ω<i><sub>h</sub></i> estimators? This study addresses these issues through a Monte Carlo simulation of reliability and ω<i><sub>h</sub></i> estimators. The conclusions are given as follows. First, the performance differences among most reliability estimators are small, and the performance of FA estimators is comparable to that of non-FA estimators. However, the current, most-recommended estimators, that is, estimators based on the bifactor model and exploratory factor analysis, tend to overestimate reliability. Second, the accuracy of ω<i><sub>h</sub></i> estimators is much lower than that of reliability estimators, so we should perform ω<i><sub>h</sub></i> estimation selectively only on data that meet several requirements. Third, exploratory bifactor analysis is more accurate than confirmatory bifactor analysis only in the presence of cross-loading; otherwise, exploratory bifactor analysis is less accurate than confirmatory bifactor analysis. Fourth, techniques known to improve the Schmid-Leiman (SL) transformation are not superior to SL transformation but have different advantages. This study provides an R Shiny app that allows users to obtain multidimensional reliability and ω<i><sub>h</sub></i> estimates with a few mouse clicks. (PsycInfo Database Record (c) 2025 APA, all rights reserved).</p>","PeriodicalId":7,"journal":{"name":"ACS Applied Polymer Materials","volume":" ","pages":"40-59"},"PeriodicalIF":4.4,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40337326","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}