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Citrus biotechnology: What has been done to improve disease resistance in such an important crop? 柑橘生物技术:我们做了什么来提高这种重要作物的抗病性?
Pub Date : 2019-01-01 DOI: 10.1016/j.biori.2019.12.004
R. Caserta , N.S. Teixeira-Silva , L.M. Granato , S.O. Dorta , C.M. Rodrigues , L.K. Mitre , J.T.H. Yochikawa , E.R. Fischer , C.A. Nascimento , R.R. Souza-Neto , M.A. Takita , R.L. Boscariol-Camargo , M.A. Machado , A.A. De Souza

Citrus cropping is widely distributed as an important economic activity worldwide. Amongst the major producers are Brazil, China, United States, Mexico and some European countries. Brazil is the largest sweet orange producer accounting for more than three-quarters of the orange juice exports around the world, followed by China and the United States (Foreign Agricultural Service/USDA, 2019). Although juice is the main commodity in many countries producing citrus, by-products like essential oils, molasses, dried pulp, pectin, blend syrup and others are also part of the citrus trade chain. Since citriculture is threatened by several pathogens and its control is mainly based on regular chemical applications both during plant development and post-harvest, management becomes a non-environmentally friendly strategy. Meanwhile, consumers are searching for sustainable products of great quality and high aggregated value pressuring the agricultural industry to crop in a sustainable manner. In this scenario, citriculture also needs innovative solutions to meet such demand. Although classic breeding programs succeeded over time, citrus narrow genetic base and long evaluation periods turns it difficult to demand faster solutions for emerging problems. Biotechnology rises as a source of innovative solutions since new varieties can be developed for specific problems. In this context, the use of biotechnology approaches involving genetic engineering that allow the development of more resistant varieties are the focus of many research groups. Here we show how biotechnology has been used to develop citrus plants more resistant to the main phytopathogens that impact citrus production.

柑橘种植作为一种重要的经济活动在世界范围内分布广泛。主要生产国包括巴西、中国、美国、墨西哥和一些欧洲国家。巴西是最大的甜橙生产国,占全球橙汁出口量的四分之三以上,其次是中国和美国(外国农业服务局/美国农业部,2019年)。虽然果汁是许多生产柑橘的国家的主要商品,但精油、糖蜜、干果肉、果胶、混合糖浆等副产品也是柑橘贸易链的一部分。由于柑橘受到多种病原体的威胁,其控制主要基于植物发育期间和收获后的常规化学应用,管理成为一种非环境友好型策略。与此同时,消费者正在寻找高质量和高综合价值的可持续产品,这迫使农业行业以可持续的方式种植。在这种情况下,柑橘也需要创新的解决方案来满足这种需求。尽管经典育种计划随着时间的推移取得了成功,但柑橘狭窄的遗传基础和漫长的评估周期使得很难要求更快地解决新出现的问题。生物技术日益成为创新解决方案的来源,因为可以针对特定问题开发新品种。在这种情况下,利用包括基因工程在内的生物技术方法,培育更具抗性的品种是许多研究小组的重点。在这里,我们展示了如何利用生物技术来开发柑橘植物,使其更能抵抗影响柑橘生产的主要植物病原体。
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引用次数: 25
Abiotic stress and self-destruction: ZmATG8 and ZmATG12 gene transcription and osmotic stress responses in maize 非生物胁迫和自毁:玉米ZmATG8和ZmATG12基因转录和渗透胁迫响应
Pub Date : 2019-01-01 DOI: 10.1016/j.biori.2019.12.001
Luis Herminio Chairez Tejeda, Vívian Ebeling Viana, Latóia Eduarda Maltzahn, Carlos Busanello, Lilian Moreira Barros, Luciano Carlos da Maia, Antonio Costa de Oliveira, Camila Pegoraro

Water deficit is one of the most important stresses affecting the maize crop. Whilst the development of osmotic stress tolerant maize (Zea mays L.) genotypes is an effective approach for reducing yield losses, understanding of the basic mechanisms of response and tolerance is limited. Under normal conditions, autophagy works at baseline levels to maintain cellular homeostasis. However, under abiotic stress conditions, this process intensifies to remove damaged or unwanted cytoplasmic materials or to recycle materials to provide anabolic substrates and metabolites to cells. This process is mediated by ATG genes (AuTophaGy-related genes). Autophagosome expansion and maturation is mediated by ATG8 and ATG12 ubiquitin-like conjugation systems. In this sense, the aim of this study was to characterize the regulation and transcriptional profile of the ZmATG8 gene and isoforms, together with the ZmATG12 gene, in maize landrace seedlings under osmotic stress conditions. A difference in transcript profile was observed between two studied landraces, with higher transcript accumulation in landrace Argentino Amarelo, which was more affected by osmotic stress. Under the stress conditions, all ZmATG genes studied showed an increase in transcript accumulation in shoot tissues in this landrace. In contrast, for landrace Taquarão a reduction in gene expression was detected, with the exception of ZmATG8b. For root tissues under stress, landrace Argentino Amarelo showed an increase in transcript accumulation for the ZmATG genes, with the exception of ZmATG8b, whilst for landrace Taquarão an increase in expression of ZmATG8e and ZmATG12 was observed, with a reduced expression of ZmATG8c. The ZmATG genes presented cis-regulatory elements involved in osmotic stress response via abscisic acid (ABA)-dependent and ABA-independent signaling. As such, it is suggested that the known transcription factors involved in the osmotic stress signaling response may act in the regulation of ZmATG genes. This work provides evidence of autophagy transcriptional signaling in response to osmotic stress in maize.

水分亏缺是影响玉米作物最重要的胁迫之一。虽然开发抗渗透胁迫玉米(Zea mays L.)基因型是减少产量损失的有效途径,但对其反应和耐受性的基本机制了解有限。在正常情况下,自噬在基线水平工作以维持细胞稳态。然而,在非生物胁迫条件下,这一过程会加强,以去除受损或不需要的细胞质物质或回收物质,为细胞提供合成代谢底物和代谢物。这个过程是由ATG基因(AuTophaGy-related genes)介导的。ATG8和ATG12泛素样偶联系统介导自噬体的扩张和成熟。从这个意义上说,本研究的目的是表征渗透胁迫条件下玉米地方品种幼苗中ZmATG8基因及其亚型和ZmATG12基因的调控和转录特征。两种地方品种间转录谱存在差异,阿根廷阿马雷罗地方品种转录谱积累量较高,受渗透胁迫影响较大。在胁迫条件下,研究的所有ZmATG基因在该地方品种茎部组织中转录本积累均增加。相比之下,除了ZmATG8b外,在地方品种taquar o中检测到基因表达的减少。对于受胁迫的根组织,除了ZmATG8b外,阿根廷本土品种阿马雷罗的zmatgg基因转录量增加,而对于本土品种taquar, ZmATG8e和ZmATG12的表达量增加,ZmATG8c的表达量减少。ZmATG基因通过ABA依赖和ABA不依赖的信号通路参与渗透胁迫反应的顺式调控元件。因此,我们认为参与渗透胁迫信号反应的已知转录因子可能参与了ZmATG基因的调控。本研究为玉米自噬转录信号响应渗透胁迫提供了证据。
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引用次数: 3
Checkerboard testing method indicates synergic effect of pelgipeptins against multidrug resistant Klebsiella pneumoniae 棋盘试验方法提示培吉肽对多药耐药肺炎克雷伯菌有协同作用
Pub Date : 2019-01-01 DOI: 10.1016/j.biori.2018.12.001
Rosiane A. Costa, Daniel B. Ortega, Débora L.A. Fulgêncio, Flávio S. Costa, Thiago F. Araújo, Cristine C. Barreto

Multidrug resistant bacteria infections have motivated the search for new therapeutics. The synergic effect of conventional antibiotics and lipopeptides of the pelgipeptin family was evaluated by the Checkerboard method. Results indicate that the association of Pelgipeptin B and C or chloramphenicol has a synergic effect against a multidrug resistant bacteria strain; which may be may be due to the variations on hydrophobicity and mechanisms of action of the molecules tested.

耐多药细菌感染促使人们寻找新的治疗方法。采用棋盘法评价常规抗生素与培吉肽家族脂肽的协同效应。结果表明,培吉肽B与C或氯霉素联用对多药耐药菌株具有协同作用;这可能是由于所测分子的疏水性和作用机制的变化。
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引用次数: 15
An overview of intellectual property within agricultural biotechnology in Brazil 巴西农业生物技术知识产权概述
Pub Date : 2019-01-01 DOI: 10.1016/J.BIORI.2019.04.003
L. Figueiredo, A. Vasconcellos, G. Prado, M. Grossi-de-Sa
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引用次数: 8
Evaluation of antioxidant activity of the fermented product from the biotransformation of R-(+)-limonene in solid-state fermentation of orange waste by Diaporthe sp. Diaporthe sp固态发酵橙渣R-(+)-柠檬烯发酵产物的抗氧化活性评价
Pub Date : 2019-01-01 DOI: 10.1016/j.biori.2019.01.002
Mário César Jucoski Bier , Adriane Bianchi Pedroni Medeiros , Norbert De Kimpe , Carlos Ricardo Soccol

Through solid-state fermentation, the endophytic fungus Diaporthe sp. biotransformed the compound R-(+)-limonene, a great quantity of which is present in orange waste. The fermented orange waste was evaluated to determine its antioxidant potential. Mass spectrometry identified several biotransformation products, which were quantified by gas chromatography. The fermentation process yielded compounds such as limonene-1,2-diol, α-terpineol, (−)-carvone, α-tocopherol, dihydrocarveol and valencene, most of which have already been associated with antioxidant activity. The highest concentration of limonene-1,2-diol produced was 3.02 g/kg of dry substrate and 0.72 g/kg of α-terpineol. The DPPH, ORAC and CUPRAC methods were employed to analyze the antioxidant activity comparing the orange waste and the fermented orange waste. According to the results obtained using the DPPH method, the fermented media extract represented 20.17% of antioxidant activity, compared to 12.1% of the orange waste extract, while from the ORAC method analysis the results were 24,011.39 μmolTE/g, obtained from the fermented extract in comparison to 5226.45 μmolTE/g from the orange waste. The results from the CUPRAC method analysis were 538.05 mg TE/g of dry extract, from the fermented extract in comparison to 168.27 TE/g of dry extract, from the orange waste. These results prove that the fermentation process increased the antioxidant potential of the orange waste.

通过固态发酵,内生真菌Diaporthe sp.对橙子废弃物中大量存在的化合物R-(+)-柠檬烯进行了生物转化。对发酵后的橙渣进行了抗氧化性能评价。质谱法鉴定了几种生物转化产物,并用气相色谱法进行了定量。发酵过程中产生了柠檬烯-1,2-二醇、α-松油醇、(−)-香芹酮、α-生育酚、二氢香芹醇和价烯等化合物,其中大部分已经与抗氧化活性有关。产柠檬烯-1,2-二醇的最高浓度为3.02 g/kg干底物和0.72 g/kg α-松油醇。采用DPPH法、ORAC法和CUPRAC法对发酵后的橘子渣和发酵后的橘子渣进行了抗氧化活性分析。DPPH法测定的结果表明,发酵培养基提取物的抗氧化活性为20.17%,而橙渣提取物的抗氧化活性为12.1%;ORAC法测定的结果表明,发酵培养基提取物的抗氧化活性为24011.39 μmolTE/g,而橙渣提取物的抗氧化活性为5226.45 μmolTE/g。CUPRAC法分析的结果为发酵提取物的干提取物为538.05 mg TE/g,而橙子废弃物的干提取物为168.27 TE/g。这些结果证明,发酵过程提高了橙渣的抗氧化能力。
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引用次数: 19
Biotechnological solutions for major cotton (Gossypium hirsutum) pathogens and pests 棉花主要病虫害的生物技术解决方案
Pub Date : 2019-01-01 DOI: 10.1016/j.biori.2020.01.001
Roberto Tarazi , Jose Leonardo Santos Jimenez , Maite F.S. Vaslin

Cotton (Gossypium spp. L.) is the largest source of natural fibers in the world, with a planted area of more than 33 million hectares in 2019. Biotic stress caused by a variety of pathogens and pests has considerable negative impacts on cotton, and control measures increase global production costs. Among the most important diseases affecting cotton are bacteria and fungi that infect leaves, stems, roots and fruits. In addition, viruses, nematodes, insects and mites cause considerable losses. Here, we summarize the diversity of biotic stresses affecting the cotton crop and highlight present and future biotechnological solutions for disease control, including transgenes, RNAi, gene editing and bioagents. We demonstrate that “Ag Biotech” solutions help keep the cotton industry sustainable in cotton-producing countries.

棉花(Gossypium spp. L.)是世界上最大的天然纤维来源,2019年种植面积超过3300万公顷。由多种病虫害引起的生物胁迫对棉花产生了相当大的负面影响,防治措施增加了全球棉花生产成本。影响棉花的最重要的疾病是感染叶子、茎、根和果实的细菌和真菌。此外,病毒、线虫、昆虫和螨虫也会造成相当大的损失。在这里,我们总结了影响棉花作物的生物胁迫的多样性,并重点介绍了目前和未来的生物技术解决方案,包括转基因、RNAi、基因编辑和生物制剂。我们证明了“农业生物技术”解决方案有助于保持棉花生产国的棉花产业可持续发展。
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引用次数: 22
In vitro evaluation of antimicrobial efficacy of pyroligneous acid from softwood mixture 针叶木混料中鹿蹄草酸抑菌效果的体外评价
Pub Date : 2019-01-01 DOI: 10.1016/J.BIORI.2019.02.004
G. Suresh, H. Pakdel, T. Rouissi, S. Brar, S. Brar, I. Fliss, Christian Roy
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引用次数: 41
Brain signal evaluation of children with Autism Spectrum Disorder in the interaction with a social robot 自闭症谱系障碍儿童与社交机器人互动时的脑信号评估
Pub Date : 2019-01-01 DOI: 10.1016/J.BIORI.2018.11.003
C. Goulart, C. Valadão, Eliete Caldeira, T. Bastos
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引用次数: 11
Brain signal evaluation of children with Autism Spectrum Disorder in the interaction with a social robot 自闭症谱系障碍儿童与社交机器人互动时的脑信号评估
Pub Date : 2019-01-01 DOI: 10.1016/j.biori.2018.11.003
Christiane Goulart , Carlos Valadão , Eliete Caldeira , Teodiano Bastos

This work consists of a pilot study in which brain signals captured by electroencephalography (EEG) of children diagnosed with Autism Spectrum Disorder (ASD) are evaluated during the interaction with a social robot. Social skills and interaction of children with ASD with the robot are proposed and assessed, using quantitative scale and images recorded by video cameras. During interaction with the robot, results show high activation of alpha and beta rhythms in brain regions important to social skills. Quantitative scales indicate a positive children–robot interaction and point out the social robot as a potential tool to stimulate social skills and facilitate the interaction with other people.

这项工作包括一项试点研究,在与社交机器人互动期间,评估被诊断为自闭症谱系障碍(ASD)的儿童的脑电图(EEG)捕获的大脑信号。使用定量量表和摄像机记录的图像,提出并评估自闭症儿童与机器人的社交技能和互动。在与机器人互动的过程中,结果显示大脑中对社交技能很重要的区域的α和β节律高度激活。定量量表表明儿童与机器人的互动是积极的,并指出社交机器人是激发社交技能和促进与其他人互动的潜在工具。
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引用次数: 10
Intellectual property for generating value for start-up companies in key enabling technologies 为初创公司创造价值的关键使能技术知识产权
Pub Date : 2019-01-01 DOI: 10.1016/j.biori.2019.01.001
Amanda Hellström , Sara Nilsson , Mikael Andersson , Ulf Håkanson

We have studied how start-up companies operating within key enabling technologies, KETs, manage formal and informal intellectual property (IP) protection for generating value. Six key aspects helping executives to create effective IP strategies for start-ups in these highly complex technologies have been identified. 15 start-ups defined as nanotechnology companies have been interviewed with open questions regarding value generated through protecting innovations. The start-ups operate in southern Sweden which currently is a KET heavy hub.

Our findings indicate six key aspects to help executives within KETs, specially within the nanotechnology start-up sector, to create effective IP strategies. First, it is important to map the technological environment and the commercial market. Most of the interviewed nanotechnology start-ups expressed that they want to increase in market share however, only four out of fifteen start-ups actually had set strategies for mapping the commercial market. Neglecting to focus on commercial market demands and merely on the innovation itself can present a future hindrance for nanotechnology start-ups. Second, it is beneficial for nanotechnology start-ups to consider and determine which actual values are important in order for them to thrive, and thereafter strategically plan formal and informal IP accordingly. Third, protecting different aspects of an innovation with different types of IP is beneficial for nanotechnology start-ups to effectively generate value. Important factors to consider when choosing how to protect different aspects of innovations are, what the market needs, the possibility to work around the solution, as well as risk of reverse engineering the innovation. Fourth, due to the complexity within nanotechnology, start-ups may benefit from treating aspects of an innovation that are difficult to reverse engineer as trade secrets. Such aspects include e.g. know-how related to the production process and other underlying know-how which add to the product's uniqueness but which not directly derivable from the product itself. Notably, only five out of fifteen nanotechnology start-ups have set strategies for how to manage their trade secrets. Fifth, to generate value, it is beneficial to formally protect aspects of an innovation that fulfill market demands as well as aspects that competitors likely would need to develop their products. Thus, aspects which are associated with sales arguments or which could form the basis for licensing agreements are beneficial to protect by patents for nanotechnology start-ups. All the studied nanotechnology start-ups have patents, but surprisingly only seven out of fifteen start-ups stated have patented aspects that generate commercial value on their market. Sixth, it is important for nanotechnology start-ups to have a plan for how the rights attained actually should generat

我们研究了初创公司如何在关键的使能技术(KETs)中运营,管理正式和非正式的知识产权(IP)保护以创造价值。本文确定了六个关键方面,帮助高管为这些高度复杂的技术领域的初创企业制定有效的知识产权战略。15家被定义为纳米技术公司的初创企业接受了采访,并就保护创新所产生的价值提出了开放性问题。这些初创企业在瑞典南部运营,那里目前是KET的重镇。我们的发现指出了六个关键方面,可以帮助KETs的高管,特别是纳米技术初创部门的高管,制定有效的知识产权战略。首先,绘制技术环境和商业市场的地图是很重要的。大多数接受采访的纳米技术初创企业表示他们希望增加市场份额,然而,15家初创企业中只有4家实际上制定了绘制商业市场的战略。忽视商业市场需求而仅仅关注创新本身可能成为纳米技术初创企业未来的障碍。其次,对于纳米技术初创企业来说,考虑并确定哪些实际价值对它们的发展是重要的,然后相应地战略性地规划正式和非正式的知识产权是有益的。第三,用不同类型的知识产权保护创新的不同方面,有利于纳米技术初创企业有效地创造价值。在选择如何保护创新的不同方面时,需要考虑的重要因素是,市场需要什么,围绕解决方案工作的可能性,以及逆向工程创新的风险。第四,由于纳米技术内部的复杂性,初创企业可能会受益于将创新中难以逆向工程的方面视为商业秘密。这些方面包括与生产过程有关的专有技术和其他增加产品独特性但不能直接从产品本身获得的潜在专有技术。值得注意的是,15家纳米技术初创企业中只有5家制定了如何管理其商业秘密的战略。第五,为了创造价值,对满足市场需求的创新方面以及竞争对手开发其产品可能需要的方面进行正式保护是有益的。因此,对于纳米技术初创企业来说,与销售论点相关的方面或可能构成许可协议基础的方面有利于专利保护。所有被研究的纳米技术初创企业都拥有专利,但令人惊讶的是,15家初创企业中只有7家拥有在其市场上产生商业价值的专利。第六,对于纳米技术初创企业来说,重要的是要有一个计划,说明获得的权利实际上应该如何产生价值。这个计划可以包含任何内容,从版权如何支持增加销售,形成授权时间表的基础,增加公司的价值等等。关于权利如何产生价值的计划也是审查是否保留特定知识产权程序的基础。
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引用次数: 4
期刊
Biotechnology Research and Innovation
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