Pub Date : 2026-03-12DOI: 10.1016/j.cca.2026.120973
Dibakar Roy, Md Sadique Hussain, Yumna Khan, Dhara N Patel, Aseel Smerat, Neeraj Bainsal, Sumel Ashique, Arun Kumar, Irfan Ali Khan, Ochilova Dilorom, Muyassar Allaberganova, Anorgul Ashirova
Hepatic fibrosis is a dynamic and progressive condition that can lead to cirrhosis and hepatocellular carcinoma (HCC) if left untreated. Appropriate assessment of the disease progression of fibrosis is critical for early intervention and individualized treatment regimens. Traditional biopsy techniques are invasive and prone to sampling errors, highlighting the need for less invasive predictive techniques. Non-coding RNAs (ncRNAs), including microRNAs (miRNAs), long ncRNAs (lncRNAs), and circular RNAs (circRNAs), have emerged as key regulators of hepatic fibrogenesis and as a possible biomarker for disease staging and prognosis. The emergence of artificial intelligence (AI), particularly machine learning (ML) and deep learning (DL), has revolutionized the comprehensive large-scale analysis of transcriptomic data, enhancing the identification of ncRNA biomarkers and predictive modeling. The AI-based algorithms have been found to be more precise in anticipating fibrosis progression by means of integrating multi-omics data, ncRNA interaction networks, and by improving non-invasive diagnostic tools. This review involves the analysis of AI and ncRNA research in hepatic fibrosis, highlighting recent discoveries, possible challenges, and future opportunities. We address the necessity of standardization of data and clinical validation, as well as discuss the role of AI in identifying biomarkers of ncRNA, predicting the stage of fibrosis and risk stratification. ncRNA analysis with AI has a tremendous potential of transforming the diagnostics and prognostics of hepatic fibrosis, enabling precision hepatology.
{"title":"AI in the Prediction of Hepatic Fibrosis Progression Using Non-Coding RNAs.","authors":"Dibakar Roy, Md Sadique Hussain, Yumna Khan, Dhara N Patel, Aseel Smerat, Neeraj Bainsal, Sumel Ashique, Arun Kumar, Irfan Ali Khan, Ochilova Dilorom, Muyassar Allaberganova, Anorgul Ashirova","doi":"10.1016/j.cca.2026.120973","DOIUrl":"10.1016/j.cca.2026.120973","url":null,"abstract":"<p><p>Hepatic fibrosis is a dynamic and progressive condition that can lead to cirrhosis and hepatocellular carcinoma (HCC) if left untreated. Appropriate assessment of the disease progression of fibrosis is critical for early intervention and individualized treatment regimens. Traditional biopsy techniques are invasive and prone to sampling errors, highlighting the need for less invasive predictive techniques. Non-coding RNAs (ncRNAs), including microRNAs (miRNAs), long ncRNAs (lncRNAs), and circular RNAs (circRNAs), have emerged as key regulators of hepatic fibrogenesis and as a possible biomarker for disease staging and prognosis. The emergence of artificial intelligence (AI), particularly machine learning (ML) and deep learning (DL), has revolutionized the comprehensive large-scale analysis of transcriptomic data, enhancing the identification of ncRNA biomarkers and predictive modeling. The AI-based algorithms have been found to be more precise in anticipating fibrosis progression by means of integrating multi-omics data, ncRNA interaction networks, and by improving non-invasive diagnostic tools. This review involves the analysis of AI and ncRNA research in hepatic fibrosis, highlighting recent discoveries, possible challenges, and future opportunities. We address the necessity of standardization of data and clinical validation, as well as discuss the role of AI in identifying biomarkers of ncRNA, predicting the stage of fibrosis and risk stratification. ncRNA analysis with AI has a tremendous potential of transforming the diagnostics and prognostics of hepatic fibrosis, enabling precision hepatology.</p>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":" ","pages":"120973"},"PeriodicalIF":2.9,"publicationDate":"2026-03-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147455974","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-12DOI: 10.1016/j.cca.2026.120944
Jesper V Johansen, Cas Weykamp, Elizabeth Barczak, Kevin Horan, Sverre Sandberg, Liesbet Deprez, Vincent Delatour, Mauro Panteghini, Neil Greenberg, Jeffrey Budd, Finlay MacKenzie, W Greg Miller
In vitro diagnostic measurement procedures (IVD-MPs) are central to clinical decision-making. Consistent interpretation across different IVD-MPs and laboratories depends on equivalence of measurement results. Equivalence of measurement results is achieved by establishing metrological traceability to higher-order references for IVD-MPs. Commutable secondary certified reference materials (CRMs) play an essential role in the metrological traceability of many IVD-MPs. However, due to their instability and inhomogeneity, whole blood (WB) samples are often not suited as source material for preparation of CRMs making secondary CRMs commutable with WB clinical samples (CSs) very challenging to produce. This report describes scenarios for establishing metrological traceability of IVD-MPs intended to measure WB CSs: i) When secondary CRMs are available and can be measured by the WB IVD-MP. If these CRMs are not commutable due to differences in matrix with WB CSs, a noncommutability bias correction may be established and implemented in the calibration hierarchy; ii) When no secondary CRM is available but WB CSs with a value assigned by a reference or other measurement procedure (MP) can be obtained, these WB CSs can be used directly in the place of a commutable secondary CRM in the calibration hierarchy; iii) When no secondary CRM is available and WB CSs with a reference value or other MP assigned value cannot be obtained. The guidance provided supports laboratories, manufacturers and other stakeholders in selecting and implementing appropriate calibration hierarchies, thereby improving the reliability of measurements on WB CSs.
{"title":"Recommendations for establishing metrological traceability for in vitro diagnostic measurement procedures intended to be used for whole blood samples.","authors":"Jesper V Johansen, Cas Weykamp, Elizabeth Barczak, Kevin Horan, Sverre Sandberg, Liesbet Deprez, Vincent Delatour, Mauro Panteghini, Neil Greenberg, Jeffrey Budd, Finlay MacKenzie, W Greg Miller","doi":"10.1016/j.cca.2026.120944","DOIUrl":"10.1016/j.cca.2026.120944","url":null,"abstract":"<p><p>In vitro diagnostic measurement procedures (IVD-MPs) are central to clinical decision-making. Consistent interpretation across different IVD-MPs and laboratories depends on equivalence of measurement results. Equivalence of measurement results is achieved by establishing metrological traceability to higher-order references for IVD-MPs. Commutable secondary certified reference materials (CRMs) play an essential role in the metrological traceability of many IVD-MPs. However, due to their instability and inhomogeneity, whole blood (WB) samples are often not suited as source material for preparation of CRMs making secondary CRMs commutable with WB clinical samples (CSs) very challenging to produce. This report describes scenarios for establishing metrological traceability of IVD-MPs intended to measure WB CSs: i) When secondary CRMs are available and can be measured by the WB IVD-MP. If these CRMs are not commutable due to differences in matrix with WB CSs, a noncommutability bias correction may be established and implemented in the calibration hierarchy; ii) When no secondary CRM is available but WB CSs with a value assigned by a reference or other measurement procedure (MP) can be obtained, these WB CSs can be used directly in the place of a commutable secondary CRM in the calibration hierarchy; iii) When no secondary CRM is available and WB CSs with a reference value or other MP assigned value cannot be obtained. The guidance provided supports laboratories, manufacturers and other stakeholders in selecting and implementing appropriate calibration hierarchies, thereby improving the reliability of measurements on WB CSs.</p>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":" ","pages":"120944"},"PeriodicalIF":2.9,"publicationDate":"2026-03-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147456015","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-11DOI: 10.1016/j.cca.2026.120972
Qamar Abuhassan, Amirali Salajegheh, Faris Anad Muhammad, Ali Fawzi Al-Hussainy, Tushar B Gajjar, Malathi Hanumanthayya, Sandeep Kumar Shukla, Rajashree Panigrahi, Neeraj Bainsal, Djamila Polatova, Hayder Naji Sameer, Rasim M Salih, Mohaned Adil
Extracellular vesicles (EVs) have emerged as pivotal mediators of intercellular communication in cardiovascular disease (CVD), influencing inflammation, thrombosis, fibrosis, angiogenesis, and cardiac remodeling through the transfer of proteins, lipids, and RNAs. The presence of EVs in virtually all biofluids and their cargo's close linkage to cellular activation or injury make EVs attractive noninvasive biomarkers for CVD diagnosis, prognosis, and therapy monitoring, with circulating EV signatures reported in myocardial infarction, heart failure, atherosclerosis, and valvular and cardiomyopathic disorders. Parallel advances highlight EVs as cell-free therapeutic agents, recapitulating key paracrine benefits of stem and progenitor cell therapies while avoiding issues of low engraftment and arrhythmogenic risk. In addition to their endogenous activity, both native and engineered EVs are being actively developed as drug delivery platforms, offering biocompatibility, immune stealth, and the capacity to cross biological barriers, with promising data for targeted delivery to the ischemic myocardium and atherosclerotic plaques. Engineering strategies, including surface functionalization, controlled cargo loading, and combination with biomaterials such as hydrogels, can increase cardiac homing, prolong circulation, and improve on-target efficacy. Despite this promise, major hurdles remain: heterogeneity of EV subtypes, lack of standardized isolation and characterization workflows, low production yields, incomplete pharmacokinetic understanding, and unresolved regulatory classification. Addressing these limitations through multi-omics, advanced bioengineering, scalable bioprocessing, and rigorously designed clinical trials will be critical to integrate EV-based biomarkers, therapeutics, and delivery systems into cardiovascular precision medicine.
{"title":"Extracellular vesicles in cardiovascular disease: Biomarkers, therapeutic applications, and drug delivery strategies.","authors":"Qamar Abuhassan, Amirali Salajegheh, Faris Anad Muhammad, Ali Fawzi Al-Hussainy, Tushar B Gajjar, Malathi Hanumanthayya, Sandeep Kumar Shukla, Rajashree Panigrahi, Neeraj Bainsal, Djamila Polatova, Hayder Naji Sameer, Rasim M Salih, Mohaned Adil","doi":"10.1016/j.cca.2026.120972","DOIUrl":"10.1016/j.cca.2026.120972","url":null,"abstract":"<p><p>Extracellular vesicles (EVs) have emerged as pivotal mediators of intercellular communication in cardiovascular disease (CVD), influencing inflammation, thrombosis, fibrosis, angiogenesis, and cardiac remodeling through the transfer of proteins, lipids, and RNAs. The presence of EVs in virtually all biofluids and their cargo's close linkage to cellular activation or injury make EVs attractive noninvasive biomarkers for CVD diagnosis, prognosis, and therapy monitoring, with circulating EV signatures reported in myocardial infarction, heart failure, atherosclerosis, and valvular and cardiomyopathic disorders. Parallel advances highlight EVs as cell-free therapeutic agents, recapitulating key paracrine benefits of stem and progenitor cell therapies while avoiding issues of low engraftment and arrhythmogenic risk. In addition to their endogenous activity, both native and engineered EVs are being actively developed as drug delivery platforms, offering biocompatibility, immune stealth, and the capacity to cross biological barriers, with promising data for targeted delivery to the ischemic myocardium and atherosclerotic plaques. Engineering strategies, including surface functionalization, controlled cargo loading, and combination with biomaterials such as hydrogels, can increase cardiac homing, prolong circulation, and improve on-target efficacy. Despite this promise, major hurdles remain: heterogeneity of EV subtypes, lack of standardized isolation and characterization workflows, low production yields, incomplete pharmacokinetic understanding, and unresolved regulatory classification. Addressing these limitations through multi-omics, advanced bioengineering, scalable bioprocessing, and rigorously designed clinical trials will be critical to integrate EV-based biomarkers, therapeutics, and delivery systems into cardiovascular precision medicine.</p>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":" ","pages":"120972"},"PeriodicalIF":2.9,"publicationDate":"2026-03-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147455905","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-09DOI: 10.1016/j.cca.2026.120966
Qamar Abuhassan, Tamara Nazar Saeed, Ali Fawzi Al-Hussainy, Jalpa R Patel, K V Jamuna, Vandana Tripathi, Samir Sahoo, Neeraj Bainsal, Djamila Polatova, Hayder Naji Sameer, Rasim M Salih, Mohaned Adil
Cardiovascular disease (CVD) remains the leading cause of morbidity and mortality worldwide, and increasing evidence has demonstrated that inflammation is a central driver of CVD initiation, progression, and clinical complications. While cholesterol-lowering therapies have transformed CVD prevention, a substantial residual inflammatory risk persists even in optimally treated patients, underscoring the need to move beyond lipid-centric paradigms. This narrative review synthesizes current knowledge on key inflammatory biomarkers including high-sensitivity C-reactive protein (hsCRP), interleukin-6 (IL-6), tumor necrosis factor-α (TNF-α), myeloperoxidase (MPO), and emerging multi-omics-derived signatures and examines their mechanistic roles in atherosclerotic plaque formation, endothelial dysfunction, and thromboinflammatory pathways. We highlight evidence from major clinical trials demonstrating that targeted modulation of inflammatory pathways, such as IL-1β inhibition and colchicine therapy, can reduce cardiovascular events independent of lipid lowering. Additionally, we discuss the translational challenges and opportunities in integrating inflammatory biomarkers into risk stratification, precision therapeutics, and clinical decision-making. By highlighting CVD as a lipid-inflammatory disorder, this review emphasizes the potential of inflammation-targeted strategies to complement existing therapies and reshape future cardiovascular prevention.
{"title":"Beyond cholesterol: targeting inflammatory biomarkers in cardiovascular disease.","authors":"Qamar Abuhassan, Tamara Nazar Saeed, Ali Fawzi Al-Hussainy, Jalpa R Patel, K V Jamuna, Vandana Tripathi, Samir Sahoo, Neeraj Bainsal, Djamila Polatova, Hayder Naji Sameer, Rasim M Salih, Mohaned Adil","doi":"10.1016/j.cca.2026.120966","DOIUrl":"10.1016/j.cca.2026.120966","url":null,"abstract":"<p><p>Cardiovascular disease (CVD) remains the leading cause of morbidity and mortality worldwide, and increasing evidence has demonstrated that inflammation is a central driver of CVD initiation, progression, and clinical complications. While cholesterol-lowering therapies have transformed CVD prevention, a substantial residual inflammatory risk persists even in optimally treated patients, underscoring the need to move beyond lipid-centric paradigms. This narrative review synthesizes current knowledge on key inflammatory biomarkers including high-sensitivity C-reactive protein (hsCRP), interleukin-6 (IL-6), tumor necrosis factor-α (TNF-α), myeloperoxidase (MPO), and emerging multi-omics-derived signatures and examines their mechanistic roles in atherosclerotic plaque formation, endothelial dysfunction, and thromboinflammatory pathways. We highlight evidence from major clinical trials demonstrating that targeted modulation of inflammatory pathways, such as IL-1β inhibition and colchicine therapy, can reduce cardiovascular events independent of lipid lowering. Additionally, we discuss the translational challenges and opportunities in integrating inflammatory biomarkers into risk stratification, precision therapeutics, and clinical decision-making. By highlighting CVD as a lipid-inflammatory disorder, this review emphasizes the potential of inflammation-targeted strategies to complement existing therapies and reshape future cardiovascular prevention.</p>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":" ","pages":"120966"},"PeriodicalIF":2.9,"publicationDate":"2026-03-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147431140","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-01Epub Date: 2026-01-12DOI: 10.1016/j.cca.2026.120840
Yaqin Cai , Bin Liu , Dandan Song , Yulong Zhao , Bibo Xie , Yingping Zhang , Yuqiu Zhou
Klotho was initially identified as an anti-ageing protein expressed mainly in renal distal tubular cells and the choroid plexus. The Klotho family comprises several members, including α-Klotho (αKl), β-Klotho (βKl), Klotho-LPH related protein (KLPH; lactase-phlorizin hydrolase), and Klotho-related protein (KlrP), which perform a multitude of functions related to various physiological processes. The effects of Klotho on various ageing-related and renal diseases, such as its antiapoptotic effects, ability to reduce oxidative stress, anti-inflammatory effects, and other functions, have extensively been reviewed, suggesting the significant cardiorenal benefits of Klotho. Klotho expression deficiency promotes age-related pathology and is correlated with renal impairment. Studies have shown that serum Klotho is significantly decreased in type 2 diabetes (T2DM) and is linked to the duration of diabetes, indicating that Klotho may be involved in multiple pathological mechanisms of T2DM. Insulin resistance (IR) plays an essential role in the onset and progression of T2DM. Research has demonstrated that the expression of Kl is closely correlated with insulin secretion, insulin signaling pathways, and insulin sensitivity and may serve as a potential predictive marker for the IR and diabetes risk. We comprehensively reviewed the relevant literature in PubMed using the keywords “Klotho”, “Type 2 diabetes”, and “Insulin resistance”. This review summarizes the relationship between Klotho and IR.
{"title":"Klotho protein and insulin resistance","authors":"Yaqin Cai , Bin Liu , Dandan Song , Yulong Zhao , Bibo Xie , Yingping Zhang , Yuqiu Zhou","doi":"10.1016/j.cca.2026.120840","DOIUrl":"10.1016/j.cca.2026.120840","url":null,"abstract":"<div><div>Klotho was initially identified as an anti-ageing protein expressed mainly in renal distal tubular cells and the choroid plexus. The Klotho family comprises several members, including α-Klotho (αKl), β-Klotho (βKl), Klotho-LPH related protein (KLPH; lactase-phlorizin hydrolase), and Klotho-related protein (KlrP), which perform a multitude of functions related to various physiological processes. The effects of Klotho on various ageing-related and renal diseases, such as its antiapoptotic effects, ability to reduce oxidative stress, anti-inflammatory effects, and other functions, have extensively been reviewed, suggesting the significant cardiorenal benefits of Klotho. Klotho expression deficiency promotes age-related pathology and is correlated with renal impairment. Studies have shown that serum Klotho is significantly decreased in type 2 diabetes (T2DM) and is linked to the duration of diabetes, indicating that Klotho may be involved in multiple pathological mechanisms of T2DM. Insulin resistance (IR) plays an essential role in the onset and progression of T2DM. Research has demonstrated that the expression of Kl is closely correlated with insulin secretion, insulin signaling pathways, and insulin sensitivity and may serve as a potential predictive marker for the IR and diabetes risk. We comprehensively reviewed the relevant literature in PubMed using the keywords “Klotho”, “Type 2 diabetes”, and “Insulin resistance”. This review summarizes the relationship between Klotho and IR.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":"583 ","pages":"Article 120840"},"PeriodicalIF":2.9,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145975616","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-01Epub Date: 2026-01-06DOI: 10.1016/j.cca.2026.120831
Fuguo Zhan , Tianbin Chen , Jun Liang , Can Liu , Mingdong Huang , Longguang Jiang
Aim
Noninvasive assessment of fibrosis in autoimmune liver diseases (AILDs) remains challenging. Soluble urokinase plasminogen activator receptor (suPAR) is a marker of systemic immune activation, but its role in AILDs is unclear. This study aimed to evaluate the diagnostic performance of circulating suPAR in AILDs and its association with fibrosis severity and immune activation.
Methods
A retrospective study included 117 patients with AILDs (n = 61), chronic hepatitis B (CHB, n = 33), metabolic dysfunction-associated steatotic liver disease (MASLD, n = 23), and 44 healthy controls. Serum suPAR was measured by chemiluminescent immunoassay. Correlations with fibrosis indices (APRI, FIB-4), liver stiffness measurement (LSM), and IgG were assessed. ROC analysis evaluated diagnostic accuracy.
Results
Serum suPAR was significantly higher in AILDs than in controls, CHB, and MASLD (median 5.16 vs. 3.58, 3.92, and 3.13 ng/mL; all P < 0.001). suPAR correlated strongly with APRI (r = 0.66), FIB-4 (r = 0.65), and LSM (r = 0.62), and modestly with IgG (r = 0.31). ROC analysis demonstrated robust discrimination between AILDs and controls (AUC = 0.839), CHB (AUC = 0.724), and MASLD (AUC = 0.944). Patients with higher suPAR levels exhibited more advanced fibrosis and greater biochemical evidence of liver injury.
Conclusions
Circulating suPAR is elevated in AILDs, reflecting fibrosis and immune activation. suPAR provides complementary, antibody-independent diagnostic value and may serve as a noninvasive biomarker for differentiating AILDs from CHB and MASLD in clinical practice.
{"title":"Circulating suPAR as a noninvasive biomarker of fibrosis and immune activation in autoimmune liver diseases","authors":"Fuguo Zhan , Tianbin Chen , Jun Liang , Can Liu , Mingdong Huang , Longguang Jiang","doi":"10.1016/j.cca.2026.120831","DOIUrl":"10.1016/j.cca.2026.120831","url":null,"abstract":"<div><h3>Aim</h3><div>Noninvasive assessment of fibrosis in autoimmune liver diseases (AILDs) remains challenging. Soluble urokinase plasminogen activator receptor (suPAR) is a marker of systemic immune activation, but its role in AILDs is unclear. This study aimed to evaluate the diagnostic performance of circulating suPAR in AILDs and its association with fibrosis severity and immune activation.</div></div><div><h3>Methods</h3><div>A retrospective study included 117 patients with AILDs (<em>n</em> = 61), chronic hepatitis B (CHB, <em>n</em> = 33), metabolic dysfunction-associated steatotic liver disease (MASLD, <em>n</em> = 23), and 44 healthy controls. Serum suPAR was measured by chemiluminescent immunoassay. Correlations with fibrosis indices (APRI, FIB-4), liver stiffness measurement (LSM), and IgG were assessed. ROC analysis evaluated diagnostic accuracy.</div></div><div><h3>Results</h3><div>Serum suPAR was significantly higher in AILDs than in controls, CHB, and MASLD (median 5.16 vs. 3.58, 3.92, and 3.13 ng/mL; all <em>P</em> < 0.001). suPAR correlated strongly with APRI (<em>r</em> = 0.66), FIB-4 (<em>r</em> = 0.65), and LSM (<em>r</em> = 0.62), and modestly with IgG (<em>r</em> = 0.31). ROC analysis demonstrated robust discrimination between AILDs and controls (AUC = 0.839), CHB (AUC = 0.724), and MASLD (AUC = 0.944). Patients with higher suPAR levels exhibited more advanced fibrosis and greater biochemical evidence of liver injury.</div></div><div><h3>Conclusions</h3><div>Circulating suPAR is elevated in AILDs, reflecting fibrosis and immune activation. suPAR provides complementary, antibody-independent diagnostic value and may serve as a noninvasive biomarker for differentiating AILDs from CHB and MASLD in clinical practice.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":"583 ","pages":"Article 120831"},"PeriodicalIF":2.9,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145932462","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-01Epub Date: 2026-01-10DOI: 10.1016/j.cca.2026.120837
Alaa H. Habib , Ziaullah Mirza Sain , Misbahuddin Rafeeq , Mohammed Matoog Karami , Hadeel A. Alsufyani , Johar Iqbal , Kamel Chaieb , Hisham N. Altayb , Muhammad Shahid Nadeem , Fahad A. Al-Abbasi , Imran Kazmi
Circulating microRNAs (miRNAs) are promising minimally invasive biomarkers for cancer and cardiovascular disorders. However, their low sequence length, low abundance, high sequence homology (including iso-miRs), and strong matrix and preanalytical effects in biofluids require highly sensitive and robust analytical technologies. CRISPR-Cas systems, particularly Cas12a, Cas12b, Cas13a, and Cas9, offer programmable nucleic acid recognition with high mismatch discrimination combined with collateral nuclease activity, enabling versatile signal amplification through fluorescence, electrochemical, electrochemiluminescent (ECL), photoelectrochemical (PEC), colorimetric, and lateral-flow readouts. This review critically evaluates the latest advances in CRISPR-based miRNA biosensors, emphasizing their analytical performance and translational potential in clinical diagnostics across plasma/serum, saliva, whole blood, and extracellular vesicle samples. The detection limits are typically within the femtomolar to attomolar range. The requirements for clinical translation are equally influenced by factors such as sample preparation, inhibitor tolerance, miRNA panel multiplexing, quantitative readout, and reagent stability. We compared CRISPR-based workflows with RT-qPCR and digital PCR and provided a roadmap for standardization and quality control, as well as the minimal analytical and clinical validation standards required for adopting CRISPR technology in clinical chemistry laboratories.
{"title":"MicroRNA-CRISPR biosensors for cancer diagnostics","authors":"Alaa H. Habib , Ziaullah Mirza Sain , Misbahuddin Rafeeq , Mohammed Matoog Karami , Hadeel A. Alsufyani , Johar Iqbal , Kamel Chaieb , Hisham N. Altayb , Muhammad Shahid Nadeem , Fahad A. Al-Abbasi , Imran Kazmi","doi":"10.1016/j.cca.2026.120837","DOIUrl":"10.1016/j.cca.2026.120837","url":null,"abstract":"<div><div>Circulating microRNAs (miRNAs) are promising minimally invasive biomarkers for cancer and cardiovascular disorders. However, their low sequence length, low abundance, high sequence homology (including iso-miRs), and strong matrix and preanalytical effects in biofluids require highly sensitive and robust analytical technologies. CRISPR-Cas systems, particularly Cas12a, Cas12b, Cas13a, and Cas9, offer programmable nucleic acid recognition with high mismatch discrimination combined with collateral nuclease activity, enabling versatile signal amplification through fluorescence, electrochemical, electrochemiluminescent (ECL), photoelectrochemical (PEC), colorimetric, and lateral-flow readouts. This review critically evaluates the latest advances in CRISPR-based miRNA biosensors, emphasizing their analytical performance and translational potential in clinical diagnostics across plasma/serum, saliva, whole blood, and extracellular vesicle samples. The detection limits are typically within the femtomolar to attomolar range. The requirements for clinical translation are equally influenced by factors such as sample preparation, inhibitor tolerance, miRNA panel multiplexing, quantitative readout, and reagent stability. We compared CRISPR-based workflows with RT-qPCR and digital PCR and provided a roadmap for standardization and quality control, as well as the minimal analytical and clinical validation standards required for adopting CRISPR technology in clinical chemistry laboratories.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":"583 ","pages":"Article 120837"},"PeriodicalIF":2.9,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145948028","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-01Epub Date: 2026-01-15DOI: 10.1016/j.cca.2026.120844
Yu-jie Ma , Jing Li , Yang Liu , Tian-ying Wei , Jia-en Liu , Jing Zhang , Hua-ying Hu , Kai Yang
Background
Hereditary ichthyosis is a heterogeneous group of skin disorders classified within the Mendelian disorders of cornification (MEDOC). Its primary clinical manifestations include hyperkeratosis, dryness, and scaling as a result of desquamation. Due to symptomatic overlap with other keratinization disorders, accurate differential diagnosis is essential. Furthermore, genetic diagnosis of hereditary ichthyosis provides critical information for genetic counseling and informed reproductive decision-making for affected families.
Methods
In this study, we performed a comprehensive genetic analysis on 15 probands with clinically confirmed or suspected ichthyosis. Using whole-exome sequencing (WES) and chromosomal microarray analysis (CMA), we identified potential pathogenic variants, which were subsequently verified in family members using Sanger sequencing or Quantitative fluorescent PCR (QF-PCR). The functional impact of detected missense variants was assessed by analyzing the conservation of the affected amino acid residues using the MEGA7 software.
Results
Our analysis revealed disease-associated variants in several genes, including FLG, STS, TGM1, and ABCA12. Notably, we identified four previously unreported variants: c.82 T > A (p.L28M) and c.9774C > A (p.H3258Q) in the FLG gene, and c.974C > T (p.S325F) and c.614 A > C (p.N205T) in the ABCA12 gene.
Conclusion
This study establishes a clear molecular diagnosis for the enrolled ichthyosis patients. The findings expand the known variant spectrum of hereditary ichthyosis, providing a solid basis for genetic counseling and valuable insights for future reproductive planning in these families.
背景:遗传性鱼鳞病是一种异质性皮肤病,属于孟德尔角化病(MEDOC)。其主要临床表现包括角化过度、干燥和脱屑引起的脱屑。由于与其他角化疾病的症状重叠,准确的鉴别诊断是必不可少的。此外,遗传性鱼鳞病的遗传诊断为受影响家庭的遗传咨询和知情生殖决策提供了重要信息。方法:本研究对15例临床确诊或疑似鱼鳞病的先证者进行了全面的遗传分析。利用全外显子组测序(WES)和染色体微阵列分析(CMA),我们确定了潜在的致病变异,随后使用Sanger测序或定量荧光PCR (QF-PCR)在家族成员中进行了验证。利用MEGA7软件分析受影响氨基酸残基的保守性,评估检测到的错义变异对功能的影响。结果:我们的分析揭示了几种基因的疾病相关变异,包括FLG、STS、TGM1和ABCA12。值得注意的是,我们确定了四个以前未报告的变体:c.82 T > (p.L28M)和c.9774C > FLG基因(p.H3258Q),和c.974C > T (p.S325F)和c.614 一 > C (p.N205T) ABCA12基因。结论:本研究为纳入的鱼鳞病患者建立了明确的分子诊断。研究结果扩大了已知的遗传性鱼鳞病变异谱,为遗传咨询提供了坚实的基础,并为这些家庭未来的生殖计划提供了有价值的见解。
{"title":"Phenotype-genotype correlation in a cohort of 15 patients with hereditary ichthyosis","authors":"Yu-jie Ma , Jing Li , Yang Liu , Tian-ying Wei , Jia-en Liu , Jing Zhang , Hua-ying Hu , Kai Yang","doi":"10.1016/j.cca.2026.120844","DOIUrl":"10.1016/j.cca.2026.120844","url":null,"abstract":"<div><h3>Background</h3><div>Hereditary ichthyosis is a heterogeneous group of skin disorders classified within the Mendelian disorders of cornification (MEDOC). Its primary clinical manifestations include hyperkeratosis, dryness, and scaling as a result of desquamation. Due to symptomatic overlap with other keratinization disorders, accurate differential diagnosis is essential. Furthermore, genetic diagnosis of hereditary ichthyosis provides critical information for genetic counseling and informed reproductive decision-making for affected families.</div></div><div><h3>Methods</h3><div>In this study, we performed a comprehensive genetic analysis on 15 probands with clinically confirmed or suspected ichthyosis. Using whole-exome sequencing (WES) and chromosomal microarray analysis (CMA), we identified potential pathogenic variants, which were subsequently verified in family members using Sanger sequencing or Quantitative fluorescent PCR (QF-PCR). The functional impact of detected missense variants was assessed by analyzing the conservation of the affected amino acid residues using the MEGA7 software.</div></div><div><h3>Results</h3><div>Our analysis revealed disease-associated variants in several genes, including <em>FLG, STS, TGM1</em>, and <em>ABCA12</em>. Notably, we identified four previously unreported variants: c.82 T > A (p.L28M) and c.9774C > A (p.H3258Q) in the <em>FLG</em> gene, and c.974C > T (p.S325F) and c.614 A > C (p.N205T) in the <em>ABCA12</em> gene.</div></div><div><h3>Conclusion</h3><div>This study establishes a clear molecular diagnosis for the enrolled ichthyosis patients. The findings expand the known variant spectrum of hereditary ichthyosis, providing a solid basis for genetic counseling and valuable insights for future reproductive planning in these families.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":"583 ","pages":"Article 120844"},"PeriodicalIF":2.9,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145994390","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-01Epub Date: 2026-01-12DOI: 10.1016/j.cca.2026.120838
Maxwell L. Harsha , Mary Ann Ness , Mark A. Marzinke
Blood beta-hydroxybutyrate (BHB) and urine ketones (UK) are key biomarkers for assessing ketosis, including life-threatening diabetic ketoacidosis (DKA). BHB is the primary ketone produced during ketotic states and shows greater sensitivity and specificity than UK, which do not detect BHB. Current professional guidelines recommend BHB testing over UK for assessing DKA. This study retrospectively examined the utilization of serum BHB and its clinical performance compared to UK over a one-year period within our quaternary care healthcare system.
BHB ordering metrics and patient demographics were obtained from the electronic health record system between November 1, 2023, and October 31, 2024. The clinical performance of BHB compared to UK was assessed through concordance analysis of specimens collected within one hour of each other, alongside comparisons to other serum analytes and chart review of patients with discordant BHB and UK results.
During the one-year period, our academic medical center's laboratory performed 3235 BHB tests from 2011 unique patients. The majority of tests were performed on adults over 60 years of age (42%) in high-acuity settings (64%), and for patients exhibiting DKA symptoms (86%). Concordance analysis revealed that 24% of BHB and UK contemporaneously ordered results were discordant, with the majority showing elevated BHB concentrations and normal UK results. Assessment of this discordant group suggested that kidney function may may be a driving factor of observed discrepancies.
These findings align with existing guidelines and highlight the need for further investigation of BHB utilization in specific populations, such as surgical and medically complex patients.
{"title":"Clinical utilization of beta-hydroxybutyrate and comparison with urine ketones in a quaternary care health system","authors":"Maxwell L. Harsha , Mary Ann Ness , Mark A. Marzinke","doi":"10.1016/j.cca.2026.120838","DOIUrl":"10.1016/j.cca.2026.120838","url":null,"abstract":"<div><div>Blood beta-hydroxybutyrate (BHB) and urine ketones (UK) are key biomarkers for assessing ketosis, including life-threatening diabetic ketoacidosis (DKA). BHB is the primary ketone produced during ketotic states and shows greater sensitivity and specificity than UK, which do not detect BHB. Current professional guidelines recommend BHB testing over UK for assessing DKA. This study retrospectively examined the utilization of serum BHB and its clinical performance compared to UK over a one-year period within our quaternary care healthcare system.</div><div>BHB ordering metrics and patient demographics were obtained from the electronic health record system between November 1, 2023, and October 31, 2024. The clinical performance of BHB compared to UK was assessed through concordance analysis of specimens collected within one hour of each other, alongside comparisons to other serum analytes and chart review of patients with discordant BHB and UK results.</div><div>During the one-year period, our academic medical center's laboratory performed 3235 BHB tests from 2011 unique patients. The majority of tests were performed on adults over 60 years of age (42%) in high-acuity settings (64%), and for patients exhibiting DKA symptoms (86%). Concordance analysis revealed that 24% of BHB and UK contemporaneously ordered results were discordant, with the majority showing elevated BHB concentrations and normal UK results. Assessment of this discordant group suggested that kidney function may may be a driving factor of observed discrepancies.</div><div>These findings align with existing guidelines and highlight the need for further investigation of BHB utilization in specific populations, such as surgical and medically complex patients.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":"583 ","pages":"Article 120838"},"PeriodicalIF":2.9,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145975617","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-01Epub Date: 2026-01-11DOI: 10.1016/j.cca.2026.120835
Wu Yan , Ruifang Shi , Wen Zheng , Wentao Yang , Francis Manyori Bigambo , Wei Pan , Wenjing Zhang , Xu Wang
Background
Insulin-like Growth Factor I (IGF-1) is crucial for growth, metabolism, and cell proliferation. Its detection is significant for diagnosing and monitoring various diseases. Chemiluminescence immunoassay (CLIA) is commonly used for IGF-1 detection but is prone to interference and variability. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) offers higher specificity and sensitivity but is less clinically applied. This study compared the consistency of serum IGF-1 levels detected by MALDI-TOF MS and CLIA.
Methods
A total of 660 serum samples from healthy individuals aged 0 to 90 years were included and analyzed using MALDI-TOF MS and CLIA methods. Initially, the MALDI-TOF MS results for the full cohort were assessed for agreement with age- and sex-specific reference intervals provided by the CLIA kit. Subsequently, a subset of 108 participants underwent paired testing under identical conditions to evaluate method comparability. The consistency between the two methods was evaluated using linear regression, the intraclass correlation coefficient (ICC), and Bland-Altman analysis.
Results
In most age groups, the results of IGF-1 concentration measured by MALDI-TOF MS fell within the reference range established by CLIA. A strong correlation (R2 = 0.982) was observed between the two methods, with the regression equation defined as IGF-1CLIA = 0.972 × IGF-1MALDI-TOF MS + 5.041. The correlation coefficients were 0.994 in children and 0.985 in adults (P < 0.001), and ICC values exceeded 0.80, indicating high consistency. Bland-Altman analysis showed a mean difference of −0.25 ng/mL, with 95% limits of agreement ranging from −24.54 to 24.04 ng/mL, which falls within the clinically acceptable range.
Conclusions
MALDI-TOF MS shows good consistency with CLIA in detecting serum IGF-I levels, providing evidence for its clinical application.
{"title":"Consistency study of IGF-1 detection by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) and chemiluminescence immunoassay (CLIA)","authors":"Wu Yan , Ruifang Shi , Wen Zheng , Wentao Yang , Francis Manyori Bigambo , Wei Pan , Wenjing Zhang , Xu Wang","doi":"10.1016/j.cca.2026.120835","DOIUrl":"10.1016/j.cca.2026.120835","url":null,"abstract":"<div><h3>Background</h3><div>Insulin-like Growth Factor I (IGF-1) is crucial for growth, metabolism, and cell proliferation. Its detection is significant for diagnosing and monitoring various diseases. Chemiluminescence immunoassay (CLIA) is commonly used for IGF-1 detection but is prone to interference and variability. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) offers higher specificity and sensitivity but is less clinically applied. This study compared the consistency of serum IGF-1 levels detected by MALDI-TOF MS and CLIA.</div></div><div><h3>Methods</h3><div>A total of 660 serum samples from healthy individuals aged 0 to 90 years were included and analyzed using MALDI-TOF MS and CLIA methods. Initially, the MALDI-TOF MS results for the full cohort were assessed for agreement with age- and sex-specific reference intervals provided by the CLIA kit. Subsequently, a subset of 108 participants underwent paired testing under identical conditions to evaluate method comparability. The consistency between the two methods was evaluated using linear regression, the intraclass correlation coefficient (ICC), and Bland-Altman analysis.</div></div><div><h3>Results</h3><div>In most age groups, the results of IGF-1 concentration measured by MALDI-TOF MS fell within the reference range established by CLIA. A strong correlation (<em>R</em><sup>2</sup> = 0.982) was observed between the two methods, with the regression equation defined as IGF-1<sub>CLIA</sub> = 0.972 × IGF-1<sub>MALDI-TOF MS</sub> + 5.041. The correlation coefficients were 0.994 in children and 0.985 in adults (<em>P</em> < 0.001), and ICC values exceeded 0.80, indicating high consistency. Bland-Altman analysis showed a mean difference of −0.25 ng/mL, with 95% limits of agreement ranging from −24.54 to 24.04 ng/mL, which falls within the clinically acceptable range.</div></div><div><h3>Conclusions</h3><div>MALDI-TOF MS shows good consistency with CLIA in detecting serum IGF-I levels, providing evidence for its clinical application.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":"583 ","pages":"Article 120835"},"PeriodicalIF":2.9,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145965273","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}