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Interactions between the Autonomic Nervous System and the Immune System after Stroke. 中风后自主神经系统与免疫系统的相互作用。
IF 5.8 2区 医学 Q1 Medicine Pub Date : 2022-06-29 DOI: 10.1002/cphy.c210047
Li Zhu, Leo Huang, Anh Le, Tom J Wang, Jiewen Zhang, Xuemei Chen, Junmin Wang, Jian Wang, Chao Jiang

Acute stroke is one of the leading causes of morbidity and mortality worldwide. Stroke-induced immune-inflammatory response occurs in the perilesion areas and the periphery. Although stroke-induced immunosuppression may alleviate brain injury, it hinders brain repair as the immune-inflammatory response plays a bidirectional role after acute stroke. Furthermore, suppression of the systemic immune-inflammatory response increases the risk of life-threatening systemic bacterial infections after acute stroke. Therefore, it is essential to explore the mechanisms that underlie the stroke-induced immune-inflammatory response. Autonomic nervous system (ANS) activation is critical for regulating the local and systemic immune-inflammatory responses and may influence the prognosis of acute stroke. We review the changes in the sympathetic and parasympathetic nervous systems and their influence on the immune-inflammatory response after stroke. Importantly, this article summarizes the mechanisms on how ANS regulates the immune-inflammatory response through neurotransmitters and their receptors in immunocytes and immune organs after stroke. To facilitate translational research, we also discuss the promising therapeutic approaches modulating the activation of the ANS or the immune-inflammatory response to promote neurologic recovery after stroke. © 2022 American Physiological Society. Compr Physiol 12:3665-3704, 2022.

急性中风是全世界发病率和死亡率的主要原因之一。中风引起的免疫炎症反应发生在病变周围和周围。脑卒中诱导的免疫抑制虽然可以减轻脑损伤,但由于急性脑卒中后的免疫炎症反应是双向的,它阻碍了脑修复。此外,抑制全身免疫炎症反应会增加急性中风后危及生命的全身细菌感染的风险。因此,有必要探索中风诱导的免疫炎症反应的机制。自主神经系统(ANS)的激活对于调节局部和全身免疫炎症反应至关重要,并可能影响急性卒中的预后。我们回顾了卒中后交感和副交感神经系统的变化及其对免疫炎症反应的影响。重要的是,本文综述了脑卒中后ANS如何通过免疫细胞和免疫器官中的神经递质及其受体调节免疫炎症反应的机制。为了促进转化研究,我们还讨论了有希望的治疗方法,通过调节ANS的激活或免疫炎症反应来促进中风后神经系统的恢复。©2022美国生理学会。中国生物医学工程学报(英文版),2016。
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引用次数: 7
Artificial Intelligence-Enabled ECG: Physiologic and Pathophysiologic Insights and Implications. 人工智能支持的心电图:生理和病理生理的见解和意义。
IF 5.8 2区 医学 Q1 Medicine Pub Date : 2022-06-29 DOI: 10.1002/cphy.c210001
Anthony H Kashou, Demilade A Adedinsewo, Konstantinos C Siontis, Peter A Noseworthy

Advancements in machine learning and computing methods have given new life and great excitement to one of the most essential diagnostic tools to date-the electrocardiogram (ECG). The application of artificial intelligence-enabled ECG (AI-ECG) has resulted in the ability to identify electrocardiographic signatures of conventional and unique variables and pathologies, giving way to tremendous clinical potential. However, what these AI-ECG models are detecting that the human eye is missing remains unclear. In this article, we highlight some of the recent developments in the field and their potential clinical implications, while also attempting to shed light on the physiologic and pathophysiologic features that enable these models to have such high diagnostic yield. © 2022 American Physiological Society. Compr Physiol 12:3417-3424, 2022.

机器学习和计算方法的进步给迄今为止最重要的诊断工具之一——心电图(ECG)带来了新的生命和极大的兴奋。人工智能心电图(AI-ECG)的应用已经产生了识别常规和独特变量和病理的心电图特征的能力,为巨大的临床潜力让路。然而,这些人工智能心电图模型检测到人眼缺失的东西仍不清楚。在本文中,我们重点介绍了该领域的一些最新进展及其潜在的临床意义,同时也试图阐明使这些模型具有如此高诊断率的生理和病理生理特征。©2022美国生理学会。中国生物医学工程学报(英文版),2012。
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引用次数: 0
Extracellular Matrix Stiffness in Lung Health and Disease. 肺健康和疾病中的细胞外基质僵硬。
IF 5.8 2区 医学 Q1 Medicine Pub Date : 2022-06-29 DOI: 10.1002/cphy.c210032
Ting Guo, Chao He, Aida Venado, Yong Zhou

The extracellular matrix (ECM) provides structural support and imparts a wide variety of environmental cues to cells. In the past decade, a growing body of work revealed that the mechanical properties of the ECM, commonly known as matrix stiffness, regulate the fundamental cellular processes of the lung. There is growing appreciation that mechanical interplays between cells and associated ECM are essential to maintain lung homeostasis. Dysregulation of ECM-derived mechanical signaling via altered mechanosensing and mechanotransduction pathways is associated with many common lung diseases. Matrix stiffening is a hallmark of lung fibrosis. The stiffened ECM is not merely a sequelae of lung fibrosis but can actively drive the progression of fibrotic lung disease. In this article, we provide a comprehensive view on the role of matrix stiffness in lung health and disease. We begin by summarizing the effects of matrix stiffness on the function and behavior of various lung cell types and on regulation of biomolecule activity and key physiological processes, including host immune response and cellular metabolism. We discuss the potential mechanisms by which cells probe matrix stiffness and convert mechanical signals to regulate gene expression. We highlight the factors that govern matrix stiffness and outline the role of matrix stiffness in lung development and the pathogenesis of pulmonary fibrosis, pulmonary hypertension, asthma, chronic obstructive pulmonary disease (COPD), and lung cancer. We envision targeting of deleterious matrix mechanical cues for treatment of fibrotic lung disease. Advances in technologies for matrix stiffness measurements and design of stiffness-tunable matrix substrates are also explored. © 2022 American Physiological Society. Compr Physiol 12:3523-3558, 2022.

细胞外基质(ECM)为细胞提供结构支持和各种环境信号。在过去的十年中,越来越多的研究表明,ECM的力学特性,通常被称为基质刚度,调节肺的基本细胞过程。越来越多的人认识到细胞和相关ECM之间的机械相互作用对于维持肺稳态至关重要。通过机械传感和机械转导途径改变的ecm衍生的机械信号失调与许多常见的肺部疾病有关。基质硬化是肺纤维化的标志。硬化的ECM不仅是肺纤维化的后遗症,而且可以积极地推动纤维化肺病的进展。在这篇文章中,我们提供了一个全面的观点,在肺健康和疾病基质硬度的作用。我们首先总结了基质硬度对各种肺细胞类型的功能和行为的影响,以及对生物分子活性和关键生理过程的调节,包括宿主免疫反应和细胞代谢。我们讨论了细胞通过探测基质刚度和转换机械信号来调节基因表达的潜在机制。我们强调了控制基质刚度的因素,并概述了基质刚度在肺发育和肺纤维化、肺动脉高压、哮喘、慢性阻塞性肺疾病(COPD)和肺癌的发病机制中的作用。我们设想针对有害基质机械线索治疗纤维化肺疾病。还探讨了矩阵刚度测量和刚度可调矩阵基板设计技术的进展。©2022美国生理学会。中国生物医学工程学报(英文版),2012。
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引用次数: 5
Endothelial Cells and the Cerebral Circulation. 内皮细胞与脑循环。
IF 5.8 2区 医学 Q1 Medicine Pub Date : 2022-06-29 DOI: 10.1002/cphy.c210015
Theresa A Lansdell, Laura C Chambers, Anne M Dorrance

Endothelial cells form the innermost layer of all blood vessels and are the only vascular component that remains throughout all vascular segments. The cerebral vasculature has several unique properties not found in the peripheral circulation; this requires that the cerebral endothelium be considered as a unique entity. Cerebral endothelial cells perform several functions vital for brain health. The cerebral vasculature is responsible for protecting the brain from external threats carried in the blood. The endothelial cells are central to this requirement as they form the basis of the blood-brain barrier. The endothelium also regulates fibrinolysis, thrombosis, platelet activation, vascular permeability, metabolism, catabolism, inflammation, and white cell trafficking. Endothelial cells regulate the changes in vascular structure caused by angiogenesis and artery remodeling. Further, the endothelium contributes to vascular tone, allowing proper perfusion of the brain which has high energy demands and no energy stores. In this article, we discuss the basic anatomy and physiology of the cerebral endothelium. Where appropriate, we discuss the detrimental effects of high blood pressure on the cerebral endothelium and the contribution of cerebrovascular disease endothelial dysfunction and dementia. © 2022 American Physiological Society. Compr Physiol 12:3449-3508, 2022.

内皮细胞形成所有血管的最内层,是贯穿所有血管节段的唯一血管成分。脑血管系统具有外周循环所没有的一些独特特性;这就要求将脑内皮视为一个独特的实体。脑内皮细胞对大脑健康起着至关重要的作用。脑血管系统负责保护大脑免受血液中携带的外部威胁。内皮细胞是这一要求的核心,因为它们构成了血脑屏障的基础。内皮也调节纤维蛋白溶解、血栓形成、血小板活化、血管通透性、代谢、分解代谢、炎症和白细胞运输。内皮细胞调节血管生成和动脉重塑引起的血管结构变化。此外,内皮有助于血管张力,允许大脑的适当灌注,这是高能量需求和没有能量储存。本文讨论了脑内皮的基本解剖和生理。在适当的情况下,我们讨论高血压对脑内皮的有害影响以及脑血管疾病内皮功能障碍和痴呆的贡献。©2022美国生理学会。中国生物医学工程学报(英文版),2016。
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引用次数: 0
Paying the Iron Price: Liver Iron Homeostasis and Metabolic Disease. 付出铁的代价:肝铁稳态与代谢疾病。
IF 5.8 2区 医学 Q1 Medicine Pub Date : 2022-06-29 DOI: 10.1002/cphy.c210039
Magdalene Ameka, Alyssa H Hasty

Iron is an essential metal element whose bioavailability is tightly regulated. Under normal conditions, systemic and cellular iron homeostases are synchronized for optimal function, based on the needs of each system. During metabolic dysfunction, this synchrony is lost, and markers of systemic iron homeostasis are no longer coupled to the iron status of key metabolic organs such as the liver and adipose tissue. The effects of dysmetabolic iron overload syndrome in the liver have been tied to hepatic insulin resistance, nonalcoholic fatty liver disease, and nonalcoholic steatohepatitis. While the existence of a relationship between iron dysregulation and metabolic dysfunction has long been acknowledged, identifying correlative relationships is complicated by the prognostic reliance on systemic measures of iron homeostasis. What is lacking and perhaps more informative is an understanding of how cellular iron homeostasis changes with metabolic dysfunction. This article explores bidirectional relationships between different proteins involved in iron homeostasis and metabolic dysfunction in the liver. © 2022 American Physiological Society. Compr Physiol 12:3641-3663, 2022.

铁是一种重要的金属元素,其生物利用度受到严格调控。在正常情况下,根据每个系统的需要,系统和细胞的铁稳态是同步的,以达到最佳功能。在代谢功能障碍期间,这种同步性丧失,全身铁稳态的标志物不再与关键代谢器官(如肝脏和脂肪组织)的铁状态相耦合。肝脏代谢异常铁超载综合征的影响与肝脏胰岛素抵抗、非酒精性脂肪性肝病和非酒精性脂肪性肝炎有关。虽然铁调节失调和代谢功能障碍之间的关系早已被承认,但由于对铁体内平衡的预测依赖于系统性测量,确定相关关系变得复杂。对细胞铁稳态如何随着代谢功能障碍而改变的理解是缺乏的,也许更有意义。本文探讨了参与铁稳态和肝脏代谢功能障碍的不同蛋白之间的双向关系。©2022美国生理学会。中国生物医学工程学报(英文版),2012。
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引用次数: 4
Remodeling of the Aged and Emphysematous Lungs: Roles of Microenvironmental Cues. 老年人和肺气肿肺的重塑:微环境线索的作用。
IF 5.8 2区 医学 Q1 Medicine Pub Date : 2022-06-29 DOI: 10.1002/cphy.c210033
Béla Suki, Jason H T Bates, Erzsébet Bartolák-Suki

Aging is a slow process that affects all organs, and the lung is no exception. At the alveolar level, aging increases the airspace size with thicker and stiffer septal walls and straighter and thickened collagen and elastic fibers. This creates a microenvironment that interferes with the ability of cells in the parenchyma to maintain normal homeostasis and respond to injury. These changes also make the lung more susceptible to disease such as emphysema. Emphysema is characterized by slow but progressive remodeling of the deep alveolar regions that leads to airspace enlargement and increased but disorganized elastin and collagen deposition. This remodeling has been attributed to ongoing inflammation that involves inflammatory cells and the cytokines they produce. Cellular senescence, another consequence of aging, weakens the ability of cells to properly respond to injury, something that also occurs in emphysema. These factors conspire to make alveolar walls more prone to mechanical failure, which can set emphysema in motion by driving inflammation through immune stimulation by protein fragments. Both aging and emphysema are influenced by microenvironmental conditions such as local inflammation, chemical makeup, tissue stiffness, and mechanical stresses. Although aging and emphysema are not equivalent, they have the potential to influence each other in synergistic ways; aging sets up the conditions for emphysema to develop, while emphysema may accelerate cellular senescence and thus aging itself. This article focuses on the similarities and differences between the remodeled microenvironment of the aging and emphysematous lung, with special emphasis on the alveolar septal wall. © 2022 American Physiological Society. Compr Physiol 12:3559-3574, 2022.

衰老是一个影响所有器官的缓慢过程,肺也不例外。在肺泡水平,衰老使肺泡空间增大,间隔壁变厚变硬,胶原蛋白和弹性纤维变直变厚。这就产生了一个微环境,干扰了薄壁细胞维持正常体内平衡和对损伤作出反应的能力。这些变化也使肺部更易患肺气肿等疾病。肺气肿的特征是肺泡深区缓慢而渐进的重塑,导致肺泡空间扩大,弹性蛋白和胶原沉积增加但无组织。这种重塑归因于持续的炎症,包括炎症细胞和它们产生的细胞因子。细胞衰老是衰老的另一个后果,它削弱了细胞对损伤作出适当反应的能力,这也发生在肺气肿中。这些因素共同作用使肺泡壁更容易发生机械故障,这可以通过蛋白质片段的免疫刺激来驱动炎症,从而使肺气肿发生运动。衰老和肺气肿都受到微环境条件的影响,如局部炎症、化学成分、组织刚度和机械应力。虽然衰老和肺气肿并不等同,但它们有可能以协同的方式相互影响;衰老为肺气肿的发展创造了条件,而肺气肿可能会加速细胞衰老,从而加速衰老本身。本文重点探讨衰老与肺气肿肺微环境重构的异同,重点讨论肺泡间隔壁。©2022美国生理学会。中国生物医学工程学报(英文版),2012。
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引用次数: 1
Physiological Systems in Promoting Frailty. 促进衰弱的生理系统。
IF 4.2 2区 医学 Q1 PHYSIOLOGY Pub Date : 2022-04-26 DOI: 10.1002/cphy.c210034
Laís R Perazza, Holly M Brown-Borg, LaDora V Thompson

Frailty is a complex syndrome affecting a growing sector of the global population as medical developments have advanced human mortality rates across the world. Our current understanding of frailty is derived from studies conducted in the laboratory as well as the clinic, which have generated largely phenotypic information. Far fewer studies have uncovered biological underpinnings driving the onset and progression of frailty, but the stage is set to advance the field with preclinical and clinical assessment tools, multiomics approaches together with physiological and biochemical methodologies. In this article, we provide comprehensive coverage of topics regarding frailty assessment, preclinical models, interventions, and challenges as well as clinical frameworks and prevalence. We also identify central biological mechanisms that may be at play including mitochondrial dysfunction, epigenetic alterations, and oxidative stress that in turn, affect metabolism, stress responses, and endocrine and neuromuscular systems. We review the role of metabolic syndrome, insulin resistance and visceral obesity, focusing on glucose homeostasis, adenosine monophosphate-activated protein kinase (AMPK), mammalian target of rapamycin (mTOR), and nicotinamide adenine dinucleotide (NAD+ ) as critical players influencing the age-related loss of health. We further focus on how immunometabolic dysfunction associates with oxidative stress in promoting sarcopenia, a key contributor to slowness, weakness, and fatigue. We explore the biological mechanisms involved in stem cell exhaustion that affect regeneration and may contribute to the frailty-associated decline in resilience and adaptation to stress. Together, an overview of the interplay of aging biology with genetic, lifestyle, and environmental factors that contribute to frailty, as well as potential therapeutic targets to lower risk and slow the progression of ongoing disease is covered. © 2022 American Physiological Society. Compr Physiol 12:1-46, 2022.

虚弱是一种复杂的综合征,随着医学的发展,全球人类死亡率不断上升,影响着越来越多的全球人口。我们目前对虚弱的认识来自于实验室和临床研究,这些研究产生了大量的表型信息。但临床前和临床评估工具、多组学方法以及生理和生化方法已为推动该领域的发展奠定了基础。在这篇文章中,我们全面介绍了有关虚弱评估、临床前模型、干预措施、挑战以及临床框架和患病率的主题。我们还确定了可能起作用的核心生物机制,包括线粒体功能障碍、表观遗传学改变和氧化应激,这些反过来又会影响新陈代谢、应激反应以及内分泌和神经肌肉系统。我们回顾了代谢综合征、胰岛素抵抗和内脏肥胖的作用,重点关注葡萄糖稳态、单磷酸腺苷激活蛋白激酶(AMPK)、哺乳动物雷帕霉素靶标(mTOR)和烟酰胺腺嘌呤二核苷酸(NAD+),它们是影响与年龄相关的健康损失的关键因素。我们进一步关注免疫代谢功能障碍如何与氧化应激联系在一起,促进肌肉疏松症,这是导致迟钝、虚弱和疲劳的关键因素。我们探讨了干细胞衰竭所涉及的生物机制,干细胞衰竭会影响再生,并可能导致与虚弱相关的恢复力和压力适应能力下降。此外,我们还概述了衰老生物学与导致虚弱的遗传、生活方式和环境因素之间的相互作用,以及降低风险和减缓疾病进展的潜在治疗目标。© 2022 美国生理学会。Compr Physiol 12:1-46, 2022.
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引用次数: 0
Respiratory-Cardiovascular Interactions During Mechanical Ventilation: Physiology and Clinical Implications. 机械通气期间呼吸-心血管相互作用:生理学和临床意义。
IF 5.8 2区 医学 Q1 Medicine Pub Date : 2022-04-26 DOI: 10.1002/cphy.c210003
John Kreit

Positive-pressure inspiration and positive end-expiratory pressure (PEEP) increase pleural, alveolar, lung transmural, and intra-abdominal pressure, which decrease right and left ventricular (RV; LV) preload and LV afterload and increase RV afterload. The magnitude and clinical significance of the resulting changes in ventricular function are determined by the delivered tidal volume, the total level of PEEP, the compliance of the lungs and chest wall, intravascular volume, baseline RV and LV function, and intra-abdominal pressure. In mechanically ventilated patients, the most important, adverse consequences of respiratory-cardiovascular interactions are a PEEP-induced reduction in cardiac output, systemic oxygen delivery, and blood pressure; RV dysfunction in patients with ARDS; and acute hemodynamic collapse in patients with pulmonary hypertension. On the other hand, the hemodynamic changes produced by respiratory-cardiovascular interactions can be beneficial when used to assess volume responsiveness in hypotensive patients and by reducing dyspnea and improving hypoxemia in patients with cardiogenic pulmonary edema. Thus, a thorough understanding of the physiological principles underlying respiratory-cardiovascular interactions is essential if critical care practitioners are to anticipate, recognize, manage, and utilize their hemodynamic effects. © 2022 American Physiological Society. Compr Physiol 12:1-24, 2022.

正压吸气和呼气末正压(PEEP)增加胸膜压、肺泡压、肺跨壁压和腹内压,降低左右心室压(RV);LV)预负荷和LV后负荷,并增加RV后负荷。由此引起的心室功能改变的程度和临床意义取决于所输送的潮气量、PEEP总水平、肺和胸壁顺应性、血管内容积、基线左室和左室功能以及腹内压。在机械通气患者中,呼吸-心血管相互作用最重要的不良后果是peep诱导的心输出量、全身氧输送和血压的减少;ARDS患者右心室功能障碍的研究肺动脉高压患者的急性血流动力学衰竭。另一方面,当用于评估低血压患者的容量反应性,以及通过减轻心源性肺水肿患者的呼吸困难和改善低氧血症时,呼吸-心血管相互作用产生的血流动力学变化是有益的。因此,如果重症监护医生要预测、识别、管理和利用呼吸-心血管相互作用的生理原理,透彻理解呼吸-心血管相互作用的生理原理是必不可少的。©2022美国生理学会。物理学报(英文版),2012。
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引用次数: 3
Molecular Modeling is an Enabling Approach to Complement and Enhance Channelopathy Research. 分子模型是补充和加强通道病研究的一种有利方法。
IF 5.8 2区 医学 Q1 Medicine Pub Date : 2022-03-29 DOI: 10.1002/cphy.c190047
Michael T Zimmermann

Hundreds of human membrane proteins form channels that transport necessary ions and compounds, including drugs and metabolites, yet details of their normal function or how function is altered by genetic variants to cause diseases are often unknown. Without this knowledge, researchers are less equipped to develop approaches to diagnose and treat channelopathies. High-resolution computational approaches such as molecular modeling enable researchers to investigate channelopathy protein function, facilitate detailed hypothesis generation, and produce data that is difficult to gather experimentally. Molecular modeling can be tailored to each physiologic context that a protein may act within, some of which may currently be difficult or impossible to assay experimentally. Because many genomic variants are observed in channelopathy proteins from high-throughput sequencing studies, methods with mechanistic value are needed to interpret their effects. The eminent field of structural bioinformatics integrates techniques from multiple disciplines including molecular modeling, computational chemistry, biophysics, and biochemistry, to develop mechanistic hypotheses and enhance the information available for understanding function. Molecular modeling and simulation access 3D and time-dependent information, not currently predictable from sequence. Thus, molecular modeling is valuable for increasing the resolution with which the natural function of protein channels can be investigated, and for interpreting how genomic variants alter them to produce physiologic changes that manifest as channelopathies. © 2022 American Physiological Society. Compr Physiol 12:3141-3166, 2022.

数以百计的人体膜蛋白形成通道,运输必要的离子和化合物,包括药物和代谢物,但其正常功能的细节或功能如何被基因变异改变而导致疾病,往往是未知的。没有这方面的知识,研究人员就无法开发出诊断和治疗经络病变的方法。高分辨率的计算方法,如分子建模,使研究人员能够研究通道病蛋白的功能,促进详细的假设生成,并产生难以通过实验收集的数据。分子模型可以根据蛋白质可能发挥作用的每个生理环境进行定制,其中一些可能目前难以或不可能通过实验进行分析。由于在高通量测序研究中,在通道病蛋白中观察到许多基因组变异,因此需要具有机制价值的方法来解释其影响。结构生物信息学的杰出领域整合了包括分子建模、计算化学、生物物理学和生物化学在内的多个学科的技术,以发展机制假设并增强可用于理解功能的信息。分子建模和模拟访问三维和时间相关的信息,目前不能从序列预测。因此,分子模型对于提高研究蛋白质通道自然功能的分辨率,以及解释基因组变异如何改变它们以产生表现为通道病变的生理变化是有价值的。©2022美国生理学会。中国生物医学工程学报(英文版),2016。
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引用次数: 0
Computational and Experimental Analysis of Genetic Variants. 遗传变异的计算与实验分析。
IF 5.8 2区 医学 Q1 Medicine Pub Date : 2022-03-29 DOI: 10.1002/cphy.c210012
Jeremy W Prokop, Vladislav Jdanov, Lane Savage, Michele Morris, Neil Lamb, Elizabeth VanSickle, Cynthia L Stenger, Surender Rajasekaran, Caleb P Bupp

Genomics has grown exponentially over the last decade. Common variants are associated with physiological changes through statistical strategies such as Genome-Wide Association Studies (GWAS) and quantitative trail loci (QTL). Rare variants are associated with diseases through extensive filtering tools, including population genomics and trio-based sequencing (parents and probands). However, the genomic associations require follow-up analyses to narrow causal variants, identify genes that are influenced, and to determine the physiological changes. Large quantities of data exist that can be used to connect variants to gene changes, cell types, protein pathways, clinical phenotypes, and animal models that establish physiological genomics. This data combined with bioinformatics including evolutionary analysis, structural insights, and gene regulation can yield testable hypotheses for mechanisms of genomic variants. Molecular biology, biochemistry, cell culture, CRISPR editing, and animal models can test the hypotheses to give molecular variant mechanisms. Variant characterizations can be a significant component of educating future professionals at the undergraduate, graduate, or medical training programs through teaching the basic concepts and terminology of genetics while learning independent research hypothesis design. This article goes through the computational and experimental analysis strategies of variant characterization and provides examples of these tools applied in publications. © 2022 American Physiological Society. Compr Physiol 12:3303-3336, 2022.

基因组学在过去十年中呈指数级增长。通过全基因组关联研究(GWAS)和定量追踪位点(QTL)等统计策略,常见变异与生理变化相关。通过广泛的过滤工具,包括群体基因组学和基于三人的测序(父母和先证者),罕见变异与疾病相关。然而,基因组关联需要后续分析,以缩小因果变异,识别受影响的基因,并确定生理变化。存在大量数据,可用于将变异与基因变化、细胞类型、蛋白质途径、临床表型和建立生理基因组学的动物模型联系起来。这些数据与生物信息学相结合,包括进化分析、结构洞察和基因调控,可以为基因组变异的机制产生可测试的假设。分子生物学、生物化学、细胞培养、CRISPR编辑和动物模型可以验证这些假设,从而给出分子变异机制。在学习独立研究假设设计的同时,通过教授遗传学的基本概念和术语,变体特征可以成为教育本科生、研究生或医学培训项目中未来专业人员的重要组成部分。本文介绍了变异表征的计算和实验分析策略,并提供了这些工具在出版物中应用的示例。©2022美国生理学会。中国生物医学工程学报(英文版),2012。
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引用次数: 4
期刊
Comprehensive Physiology
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