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Evaluating the Relationship between Various Risk Factors and COVID-19 Incidence in People Living with HIV: A Cross-Sectional Study. 评估 HIV 感染者中各种风险因素与 COVID-19 发病率之间的关系:一项横断面研究。
IF 0.8 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.2174/011570162X300999240515091324
Hamid Harandi, Esmaeil Mehraeen, Soudabeh Yarmohammadi, Mehrnaz Rasoulinejad, Muhammad Ali Rasheed, Zohal Parmoon, Seyed Ali Dehghan Manshadi, SeyedAhmad SeyedAlinaghi, Fatemeh Afroughi, Omid Dadras

Introduction: People living with HIV (PLWH) are more susceptible to acquiring and having serious consequences from COVID-19. The objective of this study was to examine the correlation between COVID-19 infection and other risk factors in these patients.

Methods: This is a descriptive-analytical study recruiting 160 PLWH referred to the Behavioral Disease Counselling Centre of Imam Khomeini Hospital in Tehran in 2021. The patients were selected through convenient sampling. A checklist was used to collect the necessary data. Descriptive statistical tests, such as mean and standard deviation, were employed alongside inferential statistics, including chi-square, Fisher, independent t-tests, and logistic regression, all evaluated at a significance level of p<0.05 using the R software.

Results: The patients' average age was 43.15 ± 11.23. Forty-four women and 116 men were present. A notable association was observed between the incidence of COVID-19 and variables such as hepatitis C and the duration of time since HIV diagnosis (p<0.001). Moreover, a strong correlation was found between the amount of COVID-19 vaccination doses given to patients and their probability of acquiring the disease. The first vaccination dose was linked to a 5.45 percent increase in COVID-19 incidence in patients, whereas the second and third doses (t=2.95, t=7.57) reduced the risk of getting COVID-19. Furthermore, no discernible link (p>0.05) was found between the use of various antiretroviral medications and COVID-19 infection.

Conclusion: This study finds that vaccine type does not impact COVID-19 outcomes in HIV-positive patients, but receiving more doses decreases the probability of occurrence of COVID-19, advocating for multiple vaccinations. However, PLWH, especially those non-compliant with antiretrovirals, need strict adherence to health protocols due to heightened vulnerability to viral illnesses.

导言:艾滋病病毒感染者(PLWH)更容易感染COVID-19并导致严重后果。本研究旨在探讨这些患者感染 COVID-19 与其他风险因素之间的相关性:这是一项描述性分析研究,招募了 2021 年转诊至德黑兰伊玛目霍梅尼医院行为疾病咨询中心的 160 名 PLWH。这些患者是通过方便抽样法选出的。采用核对表收集必要的数据。除使用平均值和标准偏差等描述性统计检验外,还使用了包括卡方检验、费雪检验、独立 t 检验和逻辑回归等推断性统计检验,所有检验的显著性水平均为 pResults:患者的平均年龄为(43.15±11.23)岁。其中女性 44 人,男性 116 人。观察发现,COVID-19 的发病率与丙型肝炎等变量之间存在显著关联,而在使用各种抗逆转录病毒药物与 COVID-19 感染之间,也发现了艾滋病毒诊断后的持续时间(p0.05):本研究发现,疫苗类型不会影响 HIV 阳性患者的 COVID-19 结果,但接种更多剂量的疫苗会降低 COVID-19 发生的概率,因此提倡多次接种疫苗。然而,艾滋病病毒感染者,尤其是那些不按时服用抗逆转录病毒药物的艾滋病病毒感染者,由于更容易感染病毒性疾病,因此需要严格遵守健康规范。
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引用次数: 0
A Step Towards Optimization of Amide-Linked Coumarin Pharmacophore: As an Anti-HIV Agent. 优化酰胺连接香豆素药理的一个步骤:作为抗艾滋病毒药物
IF 0.8 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.2174/011570162X308550240821074309
Harish Chandra Joshi, Vikas Kumar, Priyank Purohit, Indra P Pandey, Gaurav Joshi

The aim of the present investigation is to identify effective anti-HIV drugs through the in-silico virtual screening of the coumarin pharmacophore with or without substituents. Virtual screening started with target identification through computation docking and interactions, binding affinity through molecular dynamics, and the ADMET profile through the use of various enzymes. The target study suggests that the target is involved in various stages of HIV replication and in determining the ways in which non-nucleoside reverse transcriptase inhibitors (RTIs) influence it. The interaction pattern and simulation study conclude the specific affinity of coumarin pharmacophore to the HIV's reverse transcriptase enzyme, especially 3HVT. Moreover, the amide linkage worked as a synergistic bridge to provide more interaction to the pharmacophore. The initial results led to the determination of 83 virtual amide-like molecules, which were screened through docking and MD studies (100 ns) on the best-suited enzyme HIV's reverse transcriptase enzyme, such as PDB ID "3HVT". The virtual screening study revealed the high affinity of compounds 7d and 7e with the lowest IC50 values of 0.729 and 0.658 μM; moreover, their metabolism pattern study, toxicity, and QED values in a range of 0.31-0.40 support a good drug candidate. The two compounds were also synthesized and characterized for future in vitro and in vivo studies. The in silico-based descriptor of compounds 7d and 7e indicates the potential future and provides the best two molecules and their synthetic route for the development of a more effective drug to combat HIV/AIDS epidemics.

本研究的目的是通过对含有或不含取代基的香豆素药代体进行室内虚拟筛选,找出有效的抗艾滋病毒药物。虚拟筛选首先通过计算对接和相互作用确定靶点,通过分子动力学确定结合亲和力,并利用各种酶进行 ADMET 分析。靶点研究表明,该靶点参与了艾滋病毒复制的各个阶段,并决定了非核苷类逆转录酶抑制剂(RTI)对其产生影响的方式。相互作用模式和模拟研究得出结论,香豆素药层对 HIV 的逆转录酶(尤其是 3HVT)具有特异性亲和力。此外,酰胺连接起到了协同桥梁的作用,为药层提供了更多的相互作用。初步结果确定了 83 个虚拟酰胺类分子,并通过对接和 MD 研究(100 ns)对最适合的 HIV 逆转录酶酶(如 PDB ID "3HVT")进行了筛选。虚拟筛选研究表明,化合物 7d 和 7e 具有很高的亲和力,其 IC50 值最低,分别为 0.729 和 0.658 μM;此外,它们的代谢模式研究、毒性和 QED 值在 0.31-0.40 范围内,证明它们是一种很好的候选药物。此外,还对这两种化合物进行了合成和表征,以用于未来的体外和体内研究。基于硅学的 7d 和 7e 化合物描述指标预示了未来的发展潜力,并为开发更有效的抗艾滋病毒/艾滋病药物提供了最佳的两个分子及其合成路线。
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引用次数: 0
Prevalence of Risk Factors Associated With Poor Quality of Sleep in People Living with HIV and the Correlation between Quality of Sleep and Cd4+ T Lymphocyte Reconstitution: A Cross-Sectional Study from Turkey. 与艾滋病病毒感染者睡眠质量差相关的风险因素的普遍性以及睡眠质量与 Cd4+ T 淋巴细胞恢复之间的相关性:土耳其横断面研究》。
IF 0.8 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.2174/011570162X300844240507095129
Ozge Eren Korkmaz, Figen Kaptan Aydoğmuş

Introduction: The prevalence of sleep disorders in people living with HIV (PLWH) is higher than in the general population. Even if viral suppression is achieved with Antiretroviral Therapy (ART), the chronic immune activation and increased inflammation due to immune reconstitution persist. The aim of our study was to determine the prevalence of poor quality of sleep (QoS) and associated risk factors in PLWH and to investigate the relationship between poor QoS and CD4 T lymphocyte count and CD4 reconstitution.

Methods: PLWH ≥18 years old, attending for routine HIV monitoring were recruited. PLWH with conditions that may affect their QoS (pregnant, hospitalized, malignancy, substance-alcohol abuse, psychiatric disease or treatment, sleeping pill) were excluded. Pittsburgh Sleep Quality Index (PSQI, score ≥5 indicates poor QoS), Epworth Sleepiness Scale (ESS, score ≥11 indicates daytime sleepiness), and Beck Depression Scale (BDS, score ≥10 indicates clinical depression) were applied. CD4+ T lymphocyte reconstitution (current-baseline CD4+ count) and CD4+ T lymphocyte reconstitution rate [(current-baseline CD4+ count)/duration of HIV infection in years] were calculated for PLWH on ART. Student t-test and Pearson's chi-squared test were used for analysing the data, and p<0.05 was considered significant.

Results: A total of 131 (15 newly diagnosed, 116 on ART for at least six months) PLWH were enrolled. Poor QoS was detected in 60.3% of PLWH. When compared, the ratio was higher in newly diagnosed PLWH (vs PLWH on ART, p>0,05). Daytime sleepiness in PLWH with poor Qos (p=0.04) was significantly increased (vs good QoS). Clinical depression (p=0.001) was significantly more common in PLWH with poor QoS (vs good QoS). Although statistically nonsignificant (p>0,05), younger age, female sex, being single, homosexüel sexual preference, high income and living with the family were associated with poor QoS. No association was found between the ART regime and QoS. PLWH with poor QoS had a higher CD4+ T lymphocyte count (p>0,05), a higher number of CD4+ T lymphocyte reconstitution (p<0.05), and a higher reconstitution rate than PLWH with good QoS (p<0.05).

Conclusion: Prevalence of poor QoS was high in our cohort. Poor QoS was associated with CD4+ T lymphocyte reconstitution and reconstitution rate.

导言:艾滋病病毒感染者(PLWH)的睡眠障碍发病率高于普通人群。即使通过抗逆转录病毒疗法(ART)实现了病毒抑制,但由于免疫重建导致的慢性免疫激活和炎症加剧依然存在。我们的研究旨在确定 PLWH 中睡眠质量差(QoS)的发生率和相关风险因素,并调查睡眠质量差与 CD4 T 淋巴细胞计数和 CD4 重组之间的关系:方法:招募年龄≥18 岁、接受常规 HIV 监测的 PLWH。排除了可能影响睡眠质量的感染者(怀孕、住院、恶性肿瘤、滥用药物和酒精、精神疾病或治疗、服用安眠药)。采用匹兹堡睡眠质量指数(PSQI,得分≥5 分表示睡眠质量差)、埃普沃斯嗜睡量表(ESS,得分≥11 分表示白天嗜睡)和贝克抑郁量表(BDS,得分≥10 分表示临床抑郁)。计算接受抗逆转录病毒疗法的 PLWH 的 CD4+ T 淋巴细胞重建(当前基线 CD4+ 计数)和 CD4+ T 淋巴细胞重建率[(当前基线 CD4+ 计数)/HIV 感染持续时间(年)]。数据分析采用了学生 t 检验和皮尔逊卡方检验以及 pResult:共有 131 名接受抗逆转录病毒疗法的 PLWH(15 名新确诊,116 名接受抗逆转录病毒疗法至少 6 个月)参加了研究。60.3%的 PLWH 发现服务质量差。相比之下,新确诊的 PLWH 的比率更高(与接受抗逆转录病毒疗法的 PLWH 相比,P>0,05)。质量差的 PLWH(p=0.04)白天嗜睡的比例明显增加(与质量好的相比)。服务质量差的 PLWH(与服务质量好的 PLWH 相比)临床抑郁(p=0.001)的发生率明显更高。年轻、女性、单身、同性性行为偏好、高收入和与家人同住虽然在统计学上不显著(p>0,05),但都与质量较差有关。抗逆转录病毒疗法与 QoS 之间没有关联。QoS 差的 PLWH 的 CD4+ T 淋巴细胞计数较高(p>0,05),CD4+ T 淋巴细胞重建数量较高(p 结论:QoS 差的 PLWH 患病率较高:在我们的队列中,服务质量差的发生率很高。QoS 差与 CD4+ T 淋巴细胞重建和重建率有关。
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引用次数: 0
Endobronchial Tuberculosis in an HIV-positive Case. 一例 HIV 阳性病例中的支气管内膜结核。
IF 1 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.2174/011570162X262663231214053029
Savaş Gegin, Burcu Özdemir, Özgür Günal, Şeyma Topal, Çiğdem Uzun, Levent Özdemir

Introduction: Tuberculosis is an opportunist infection that is fatal and most frequently seen in HIV-positive patients due to immunosuppression. Endobronchial lesions can portray symptoms in different ways. Endobronchial Tuberculosis is one of these lesions.

Case report: An HIV-positive, untreated 26-year-old patient with fever, cough, and dyspnea consulted our clinic. In the chest X-ray taken, effusion on the right side and non-homogeneous density increase in the middle and upper lobes, bilaterally more prominent on the right side, were observed. Therefore, the patient underwent bronchoscopy because the CT (computerized tomography) showed mediastinal lymphadenopathy (LAP) and an endobronchial lesion in the left main bronchus. During bronchoscopy, a vegetative endobronchial lesion that causes obstruction in the left main bronchus was monitored. With the help of Pathology and PCR results, endobronchial tuberculosis was diagnosed.

Conclusion: Even if Acid-alcohol-resistant Bacillus (ARB) is detected negative in patients who stop responding to antimicrobial treatment and are being monitored under radiological scanning, a distinctive diagnosis of endobronchial tuberculosis should be kept in mind while performing bronchoscopy.

导言:结核病是一种致命的机会性感染,由于免疫抑制,最常见于艾滋病病毒阳性患者。支气管内病变可通过不同方式表现出症状。支气管内膜结核就是其中一种病变:病例报告:一名 26 岁的 HIV 阳性患者因发热、咳嗽和呼吸困难就诊于我院。在拍摄的胸部 X 光片中,发现右侧有渗出物,中叶和上叶有非均质密度增高,右侧更为突出。因此,患者接受了支气管镜检查,因为 CT(计算机断层扫描)显示纵隔淋巴结病(LAP)和左主支气管支气管内病变。在支气管镜检查过程中,监测到了导致左主支气管阻塞的支气管内植物性病变。在病理学和 PCR 结果的帮助下,确诊为支气管内膜结核:结论:即使抗酸杆菌(ARB)在对抗菌治疗停止反应并接受放射扫描监测的患者中检测为阴性,在进行支气管镜检查时仍应牢记支气管内膜结核的明确诊断。
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引用次数: 0
Human Immunodeficiency Virus-1 Drug Resistance Mutations in Iranian Treatment-experienced Individuals. 伊朗治疗经验丰富者的人类免疫缺陷病毒-1 耐药性突变。
IF 1 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.2174/011570162X273321240105081444
Farah Bokharaei-Salim, Khadijeh Khanaliha, Seyed Hamidreza Monavari, Seyed Jalal Kiani, Ahmad Tavakoli, Ensieh Jafari, Sara Chavoshpour, Mohammad Hossein Razizadeh, Saeed Kalantari

Background: Human immunodeficiency virus-1 infection still remains a global health threat. While antiretroviral therapy is the primary treatment option, concerns about the emergence of drug-resistance mutations and treatment failure in HIV-infected patients persist.

Objective: In this study, we investigated the development of drug resistance in HIV-1-infected individuals receiving antiretroviral therapy for 6-10 years.

Methods: In this cross-sectional study, we evaluated 144 people living with HIV-1 who had received antiretroviral therapy for at least 6 years. Plasma specimens were collected, and the HIV-1 viral load and drug-resistance mutations were assessed using molecular techniques.

Results: The demographic and epidemiological characteristics of the participants were also analyzed: Twelve [8.3%) of the studied patients showed a viral load over 1000 copies per/mL, which indicates the suboptimal response to antiretroviral therapy. Significant correlations were found between viral load and CD4 count, as well as epidemiological factors, such as vertical transmission, history of imprisonment, and needle stick injuries. Drug resistance mutations were detected in 10 (83.3%) of patients who failed on antiretroviral therapy, with the most common mutations observed against nucleoside reverse transcriptase inhibitors (5 (41.7%)) and non-nucleoside reverse transcriptase inhibitors (9 (75%)). Phylogenetic analysis revealed that 12 patients who failed treatment were infected with CRF35_AD.

Conclusion: Our study provides important insights into the characteristics and development of drug resistance in HIV-1-infected individuals receiving long-term antiretroviral therapy in Iran. The findings underline the need for regular viral load monitoring, individualized treatment selection, and targeted interventions to optimize treatment outcomes and prevent the further spread of drug-resistant strains.

背景:人体免疫缺陷病毒-1感染仍然是全球健康的威胁。虽然抗逆转录病毒疗法是主要的治疗方法,但人们对艾滋病病毒感染者出现耐药性突变和治疗失败的担忧依然存在:在这项研究中,我们调查了接受抗逆转录病毒疗法 6-10 年的 HIV-1 感染者的耐药性发展情况:在这项横断面研究中,我们对 144 名接受抗逆转录病毒疗法至少 6 年的 HIV-1 感染者进行了评估。我们采集了血浆标本,并使用分子技术评估了 HIV-1 病毒载量和耐药性突变:结果:还分析了参与者的人口统计学和流行病学特征:12名患者(8.3%)的病毒载量超过1000拷贝/毫升,这表明他们对抗逆转录病毒疗法的反应不理想。研究发现,病毒载量与 CD4 细胞数以及垂直传播、入狱史和针刺伤等流行病学因素之间存在显著相关性。在10例(83.3%)抗逆转录病毒治疗失败的患者中发现了耐药性变异,其中最常见的变异是针对核苷类逆转录酶抑制剂(5例(41.7%))和非核苷类逆转录酶抑制剂(9例(75%))。系统发育分析显示,12名治疗失败的患者感染了CRF35_AD:我们的研究为了解伊朗长期接受抗逆转录病毒治疗的 HIV-1 感染者的耐药性特征和发展情况提供了重要依据。这些发现强调了定期监测病毒载量、选择个体化治疗和有针对性干预的必要性,以优化治疗效果并防止耐药菌株的进一步传播。
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引用次数: 0
Sagittal Abdominal Diameter as the Best Predictor of Metabolic Syndrome in HIV-Infected Men on Antiretroviral Therapy. 腹部矢状径是接受抗逆转录病毒疗法的男性艾滋病感染者代谢综合征的最佳预测指标。
IF 0.8 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.2174/011570162X270929240125055222
Zorka Drvendžija, Biljana Srdić Galić, Miloš Vujanović, Daniela Marić, Nina Brkić Jovanović, Snežana Brkić, Vesna Turkulov, Dalibor Ilić

Background: The interaction of human immunodeficiency virus (HIV), host and antiretroviral therapy (ART) causes a range of metabolic disorders that can be characterized as a metabolic syndrome (MetS) that increases the cardiovascular risk. MetS involves central obesity, which can be detected using different anthropometric parameters.

Objective: To assess the abilities of different anthropometric parameters in the prediction of MetS in HIV-infected men on ART.

Method: The study involved 92 male participants (mean age 44.46±10.38 years), divided into two groups: with and without MetS. All subjects underwent biochemical evaluation (triglycerides, HDL-cholesterol, fasting glucose), blood pressure measurement and anthropometric assessment: body mass, body height, body mass index (BMI), body fat mass, body circumferences (chest, upper arm, forearm, waist, hip, proximal and middle thigh and calf), sagittal abdominal diameter (SAD), skinfold thicknesses (subscapular, anterior and posterior upper arm, anterior and lateral forearm, abdominal, supraspinal, thigh and calf), waist-to-hip ratio (WHR), waist-to-height ratio (WHtR), waist-to-thigh ratio (WTR), sagittal abdominal diameter-to-body height ratio (SADH), body adiposity index (BAI) and conicity index. MetS was specified according to IDF criteria.

Results: Subjects with MetS had statistically significant higher values of all anthropometric parameters except middle thigh circumference, calf skinfold and body height. According to ROC analysis and Binary Logistic Regression, SAD has been shown as the best predictor of MetS with a predictive value of 21.40 cm (AUC:0.91), followed by WHR with a predictive value of 0.93.

Conclusion: Sagittal abdominal diameter is the strongest anthropometric indicator of MetS in HIV-infected patients on ART.

背景:人体免疫缺陷病毒(HIV)、宿主和抗逆转录病毒疗法的相互作用会导致一系列代谢紊乱,这些紊乱可被称为代谢综合征(MetS),会增加心血管风险。代谢综合征包括中心性肥胖,可通过不同的人体测量参数检测出来:评估不同人体测量参数在预测接受抗逆转录病毒疗法的男性艾滋病感染者 MetS 中的能力:研究涉及 92 名男性受试者(平均年龄为 44.46±10.38 岁),分为两组:有 MetS 和无 MetS。所有受试者均接受了生化评估(甘油三酯、高密度脂蛋白胆固醇、空腹血糖)、血压测量和人体测量评估:体重、身高、体重指数(BMI)、体脂量、体围(胸围、上臂围、前臂围、腰围、臀围、大腿近端和中部以及小腿围)、腹部矢状径(SAD)、皮褶厚度(肩胛下、上臂前侧和后侧、前臂前侧和外侧、大腿近端和中部以及小腿围)、腰臀比 (WHR)、腰高比 (WHTR)、腰高比 (WTR)、腹部矢状径与身高比 (SADH)、体脂指数 (BAI) 和锥体指数。MetS 是根据 IDF 标准确定的:除大腿中部周长、小腿皮褶和身高外,患有 MetS 的受试者所有人体测量参数值均显著高于其他受试者。根据 ROC 分析和二元逻辑回归,SAD 是 MetS 的最佳预测指标,预测值为 21.40 厘米(AUC:0.91),其次是 WHR,预测值为 0.93:腹部矢状径是接受抗逆转录病毒疗法的 HIV 感染者 MetS 的最强人体测量指标。
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引用次数: 0
Pill Burden: A Major Barrier to HAART Adherence and Fixed Dose Combinations (FDCS) as its Solution - A Mini-Review. 药片负担:药片负担:坚持接受 HAART 治疗的主要障碍和固定剂量复合制剂 (FDCS) 作为其解决方案--微型综述。
IF 0.8 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.2174/011570162X307740240604115154
Mugisa Simon, Ssebaduka Derrick, Sreya Kosanam, Rajeshwari Pasupula

HIV/ AIDS is a global pandemic, one of the most challenging; with no cure for the disease, various therapies available in the form of regimens as Highly Active Anti-Retroviral Therapy (HAART) or simply Anti-Retroviral Therapy (ART) are the only way to manage the disease. The Fixed Dose Combinations (FDCs) concept has been a well-recognised improvement in pharmacotherapy for the treatment of a variety of chronic maladies like hypertension, diabetes, HIV/AIDS, and several FDC products consisting of HIV drugs are approved. These single-tablet regimens have been essential in streamlining ART, lowering pill burden and increasing adherence. Adherence to HAART is the most vital factor to ensure medication success and virologic suppression. However, adherence is faced with several barriers including adverse effects of drugs, the complexity of ART, social-cultural factors, and pill burden among others. This writing reviews the concept of adherence to ART, and its barriers while stressing pill burden as a significant one which we suggest would be solved by using Fixed Dose Combinations (FDCs).

艾滋病毒/艾滋病是一种全球性流行病,也是最具挑战性的疾病之一;由于无法治愈这种疾病,以高活性抗逆转录病毒疗法(HAART)为形式的各种疗法是控制疾病的唯一方法。坚持 HAART 是确保药物治疗成功和病毒抑制的最关键因素。然而,坚持治疗面临着多种障碍,包括抗逆转录病毒疗法(ART)药物的不良反应、抗逆转录病毒疗法的复杂性、社会和文化因素以及服药负担等。固定剂量复方制剂(FDC)的概念已被公认为是药物疗法的一种改进,可用于治疗高血压、糖尿病、艾滋病等多种慢性疾病,目前已有几种由艾滋病药物组成的固定剂量复方制剂产品获得批准。本文回顾了坚持抗逆转录病毒疗法的概念及其障碍,同时强调药片负担是一个重要问题,我们建议使用固定剂量复方制剂(FDC)来解决这一问题。
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引用次数: 0
Detection Of CCR5 Delta-32 Mutation Using High-Resolution Melting Curve Analysis: Challenges and Facts. 利用高分辨率熔融曲线分析检测 CCR5 Delta-32 突变:挑战与事实。
IF 0.8 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.2174/011570162X326491240906064322
Seyed Jalal Kiani, Tahereh Donyavi, Farah Bokharaei-Salim

Introduction: The C-C chemokine receptor type 5 (CCR5) is a major co-receptor for human immunodeficiency virus (HIV). Some individuals carry the CCR5 delta-32 genetic polymorphism. People with homozygous CCR5 delta-32 gene are nearly completely resistant to HIV-1 infection. High-resolution melting curve (HRM) analysis is a post-PCR technique utilized for identifying genetic variations in a quick, affordable, and closed-tube assay. The objective of this study was to develop an HRM assay for easy detection of delta-32 mutations.

Materials and methods: DNA was extracted from peripheral blood mononuclear cells. HRM was performed to detect delta-32 mutation. The study investigated the impact of various factors, including annealing temperature, template concentration, touchdown PCR, additives, amplicon size, and program settings, on HRM Tm differentiation.

Results: It was expected that there would be a 4°C Tm difference between amplicons with and without delta-32 mutation, but the test showed a difference of only 2.3°C. In attempts to identify heterozygote delta-32 variants, a Tm difference of only 0.4°C could be achieved. Various modifications were applied, such as adjusting the template concentration, using touchdown PCR, and adding DMSO and glycerol. However, none of these changes helped to differentiate the Tm effectively, especially in delta-32 heterozygote samples.

Conclusion: The HRM test identified four samples with heterozygote mutations in each HIV-infected (8.89%) and control (5.72%) groups. More importantly, this study showed that identifying the delta-32 mutation of the CCR5 gene using HRM assay is not as straightforward as previously suggested in some literature, and it requires special setup conditions.

导言C-C 趋化因子受体 5 型(CCR5)是人类免疫缺陷病毒(HIV)的主要共受体。有些人携带 CCR5 delta-32 基因多态性。同型 CCR5 delta-32 基因携带者对 HIV-1 感染几乎具有完全抵抗力。高分辨率熔解曲线(HRM)分析是一种 PCR 后技术,可用于快速、经济和密闭试管检测中识别基因变异。本研究的目的是开发一种高分辨熔解曲线分析法,以方便检测 delta-32 基因突变:从外周血单核细胞中提取 DNA。材料和方法:从外周血单核细胞中提取 DNA,进行 HRM 检测 delta-32 突变。研究调查了退火温度、模板浓度、触头 PCR、添加剂、扩增子大小和程序设置等各种因素对 HRM Tm 分化的影响:结果:预计存在和不存在 delta-32 突变的扩增子之间会有 4°C 的 Tm 差异,但测试结果显示仅有 2.3°C 的差异。在尝试鉴定杂合子 delta-32 变体时,Tm 差值仅为 0.4°C。研究人员进行了各种修改,如调整模板浓度、使用触地 PCR、添加 DMSO 和甘油等。然而,这些改变都无法有效区分 Tm,尤其是 delta-32 杂合子样本:HRM检测在HIV感染组(8.89%)和对照组(5.72%)各发现了4个杂合突变样本。更重要的是,这项研究表明,使用 HRM 检测法鉴定 CCR5 基因的 delta-32 突变并不像之前一些文献中提到的那样简单,它需要特殊的设置条件。
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引用次数: 0
Heterologous DNA Prime/Protein Boost Immunization Targeting Nef-Tat Fusion Antigen Induces Potent T-cell Activity and in vitro Anti-SCR HIV-1 Effects. 以 Nef-Tat 融合抗原为靶点的异源 DNA 基质/蛋白增强免疫可诱导强大的 T 细胞活性和体外抗SCR HIV-1 作用。
IF 0.8 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.2174/011570162X297602240430142231
Leila Sadeghi, Azam Bolhassani, Elham Mohit, Kazem Baesi, Mohammad Reza Aghasadeghi

Background: Heterologous combinations in vaccine design are an effective approach to promote T cell activity and antiviral effects. The goal of this study was to compare the homologous and heterologous regimens targeting the Nef-Tat fusion antigen to develop a human immunodeficiency virus-1 (HIV-1) therapeutic vaccine candidate.

Methods: At first, the DNA and protein constructs harboring HIV-1 Nef and the first exon of Tat as linked form (pcDNA-nef-tat and Nef-Tat protein) were prepared in large scale and high purity. The generation of the Nef-Tat protein was performed in the E. coli expression system using an IPTG inducer. Then, we evaluated and compared immune responses of homologous DNA prime/ DNA boost, homologous protein prime/ protein boost, and heterologous DNA prime/protein boost regimens in BALB/c mice. Finally, the ability of mice splenocytes to secret cytokines after exposure to single-cycle replicable (SCR) HIV-1 was compared between immunized and control groups in vitro.

Results: The nef-tat gene was successfully subcloned in eukaryotic pcDNA3.1 (-) and prokaryotic pET-24a (+) expression vectors. The recombinant Nef-Tat protein was generated in the E. coli Rosetta strain under optimized conditions as a clear band of ~ 35 kDa detected on SDS-PAGE. Moreover, transfection of pcDNA-nef-tat into HEK-293T cells was successfully performed using Lipofectamine 2000, as confirmed by western blotting. The immunization studies showed that heterologous DNA prime/protein boost regimen could significantly elicit the highest levels of Ig- G2a, IFN-γ, and Granzyme B in mice as compared to homologous DNA/DNA and protein/protein regimens. Moreover, the secretion of IFN-γ was higher in DNA/protein regimens than in DNA/DNA and protein/protein regimens after exposure of mice splenocytes to SCR HIV-1 in vitro.

Conclusion: The chimeric HIV-1 Nef-Tat antigen was highly immunogenic, especially when applied in a heterologous prime/ boost regimen. This regimen could direct immune response toward cellular immunity (Th1 and CTL activity) and increase IFN-γ secretion after virus exposure.

背景:疫苗设计中的异源组合是促进T细胞活性和抗病毒效果的有效方法。本研究的目的是比较针对 Nef-Tat 融合抗原的同源和异源方案,以开发候选的人类免疫缺陷病毒-1(HIV-1)治疗性疫苗:方法:首先,大规模、高纯度地制备了HIV-1 Nef和Tat第一外显子连接形式的DNA和蛋白质构建体(pcDNA-nef-tat和Nef-Tat蛋白)。在大肠杆菌表达系统中使用 IPTG 诱导剂生成 Nef-Tat 蛋白。然后,我们评估并比较了同源DNA质粒/DNA增强、同源蛋白质粒/蛋白增强和异源DNA质粒/蛋白增强方案对BALB/c小鼠的免疫反应。最后,在体外比较了免疫组和对照组小鼠脾细胞在暴露于单循环可复制(SCR)HIV-1后分泌细胞因子的能力:结果:nef-tat 基因成功亚克隆到真核 pcDNA3.1 (-) 和原核 pET-24a (+) 表达载体中。在优化条件下,重组 Nef-Tat 蛋白在大肠杆菌 Rosetta 菌株中生成,在 SDS-PAGE 上检测到一条约 35 kDa 的清晰条带。此外,使用 Lipofectamine 2000 成功地将 pcDNA-nef-tat 转染到 HEK-293T 细胞中,并经 Western 印迹证实。免疫研究表明,与同源 DNA/DNA 和蛋白质/蛋白质方案相比,异源 DNA 质粒/蛋白质增强方案能显著激发小鼠体内最高水平的 Ig-G2a、IFN-γ 和 Granzyme B。此外,小鼠脾细胞在体外暴露于 SCR HIV-1 后,DNA/蛋白质方案的 IFN-γ 分泌高于 DNA/DNA 和蛋白质/蛋白质方案:结论:嵌合 HIV-1 Nef-Tat 抗原具有很高的免疫原性,尤其是在异源原代/增强方案中应用时。结论:嵌合 HIV-1 Nef-Tat 抗原具有很强的免疫原性,尤其是在异源原代/增强方案中使用时。这种方案可将免疫反应导向细胞免疫(Th1 和 CTL 活性),并在病毒暴露后增加 IFN-γ 的分泌。
{"title":"Heterologous DNA Prime/Protein Boost Immunization Targeting Nef-Tat Fusion Antigen Induces Potent T-cell Activity and <i>in vitro</i> Anti-SCR HIV-1 Effects.","authors":"Leila Sadeghi, Azam Bolhassani, Elham Mohit, Kazem Baesi, Mohammad Reza Aghasadeghi","doi":"10.2174/011570162X297602240430142231","DOIUrl":"10.2174/011570162X297602240430142231","url":null,"abstract":"<p><strong>Background: </strong>Heterologous combinations in vaccine design are an effective approach to promote T cell activity and antiviral effects. The goal of this study was to compare the homologous and heterologous regimens targeting the Nef-Tat fusion antigen to develop a human immunodeficiency virus-1 (HIV-1) therapeutic vaccine candidate.</p><p><strong>Methods: </strong>At first, the DNA and protein constructs harboring HIV-1 Nef and the first exon of Tat as linked form (pcDNA-<i>nef-tat</i> and Nef-Tat protein) were prepared in large scale and high purity. The generation of the Nef-Tat protein was performed in the <i>E. coli</i> expression system using an IPTG inducer. Then, we evaluated and compared immune responses of homologous DNA prime/ DNA boost, homologous protein prime/ protein boost, and heterologous DNA prime/protein boost regimens in BALB/c mice. Finally, the ability of mice splenocytes to secret cytokines after exposure to single-cycle replicable (SCR) HIV-1 was compared between immunized and control groups <i>in vitro</i>.</p><p><strong>Results: </strong>The nef-tat gene was successfully subcloned in eukaryotic pcDNA3.1 (-) and prokaryotic pET-24a (+) expression vectors. The recombinant Nef-Tat protein was generated in the <i>E. coli Rosetta</i> strain under optimized conditions as a clear band of ~ 35 kDa detected on SDS-PAGE. Moreover, transfection of pcDNA-<i>nef-tat</i> into HEK-293T cells was successfully performed using Lipofectamine 2000, as confirmed by western blotting. The immunization studies showed that heterologous DNA prime/protein boost regimen could significantly elicit the highest levels of Ig- G2a, IFN-γ, and Granzyme B in mice as compared to homologous DNA/DNA and protein/protein regimens. Moreover, the secretion of IFN-γ was higher in DNA/protein regimens than in DNA/DNA and protein/protein regimens after exposure of mice splenocytes to SCR HIV-1 <i>in vitro</i>.</p><p><strong>Conclusion: </strong>The chimeric HIV-1 Nef-Tat antigen was highly immunogenic, especially when applied in a heterologous prime/ boost regimen. This regimen could direct immune response toward cellular immunity (Th1 and CTL activity) and increase IFN-γ secretion after virus exposure.</p>","PeriodicalId":10911,"journal":{"name":"Current HIV Research","volume":" ","pages":"109-119"},"PeriodicalIF":0.8,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140855957","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Discordance of Aqueous/Plasma HIV Replication on ART. 抗逆转录病毒疗法中水/血浆 HIV 复制的不一致性。
IF 1 4区 医学 Q4 IMMUNOLOGY Pub Date : 2024-01-01 DOI: 10.2174/011570162X268730231212112119
Xin Che, Luoziyi Wang, Weimei Ma, Rui Wang, Zhiliang Wang

Background: The study was conducted to analyze HIV dynamics across blood-retinal barrier (BRB) and the relevant risk factors for HIV-associated ocular complications.

Methods: This study included a case series of 40 HIV-positive patients with ocular lesions, which were studied retrospectively. Clinical and laboratory examinations included plasma and intraocular viral load (VL).

Results: HIV VL on paired aqueous/plasma samples was available for 40 patients. Aqueous VL was negatively associated with antiretroviral treatment (ART) duration (p = 0.02 and p < 0.05), and plasma VL was independent of ART duration (p = 0.53). An aqueous/plasma discordance was found in 19/40 (47.5%) patients, eight of whom (20%) had detectable aqueous VL despite a suppressed plasma VL (escape). There were significant differences in CD4+ T-lymphocyte levels (p = 0.011 and p < 0.05) and ART duration (p = 0.007 and p < 0.05) between the patients with HIV-associated ocular complications and the patients without.

Conclusion: This study provides a rationale for initiating ART early in the course of infection to reduce HIV VL in the aqueous humor, and raises the possibility of the ocular sanctuary where HIV replicates. Meanwhile, early and standard ART would be an optimal option to protect against ocular opportunistic infection.

背景:本研究旨在分析艾滋病毒在血-视网膜屏障(BRB)上的动态变化以及导致艾滋病毒相关眼部并发症的相关风险因素:该研究旨在分析艾滋病病毒跨血液-视网膜屏障(BRB)的动态变化以及艾滋病病毒相关眼部并发症的相关风险因素:本研究包括 40 例眼部病变的 HIV 阳性患者的病例系列,并对其进行了回顾性研究。临床和实验室检查包括血浆和眼内病毒载量(VL):结果:40 名患者的配对水样/血浆样本中均有 HIV VL。水样 VL 与抗逆转录病毒疗法(ART)持续时间呈负相关(p = 0.02 和 p < 0.05),血浆 VL 与抗逆转录病毒疗法持续时间无关(p = 0.53)。19/40(47.5%)名患者的水样 VL 与血浆 VL 不一致,其中 8 人(20%)尽管血浆 VL 已被抑制,但仍可检测到水样 VL(逃逸)。患有艾滋病相关眼部并发症的患者与未患有艾滋病相关眼部并发症的患者在 CD4+ T 淋巴细胞水平(p=0.011 和 p < 0.05)和抗逆转录病毒疗法持续时间(p=0.007 和 p < 0.05)方面存在明显差异:本研究为在感染早期开始抗逆转录病毒疗法以减少眼房水中的 HIV VL 提供了依据,并提出了眼部成为 HIV 复制圣地的可能性。同时,早期和标准的抗逆转录病毒疗法将是防止眼部机会性感染的最佳选择。
{"title":"Discordance of Aqueous/Plasma HIV Replication on ART.","authors":"Xin Che, Luoziyi Wang, Weimei Ma, Rui Wang, Zhiliang Wang","doi":"10.2174/011570162X268730231212112119","DOIUrl":"10.2174/011570162X268730231212112119","url":null,"abstract":"<p><strong>Background: </strong>The study was conducted to analyze HIV dynamics across blood-retinal barrier (BRB) and the relevant risk factors for HIV-associated ocular complications.</p><p><strong>Methods: </strong>This study included a case series of 40 HIV-positive patients with ocular lesions, which were studied retrospectively. Clinical and laboratory examinations included plasma and intraocular viral load (VL).</p><p><strong>Results: </strong>HIV VL on paired aqueous/plasma samples was available for 40 patients. Aqueous VL was negatively associated with antiretroviral treatment (ART) duration (p = 0.02 and p < 0.05), and plasma VL was independent of ART duration (p = 0.53). An aqueous/plasma discordance was found in 19/40 (47.5%) patients, eight of whom (20%) had detectable aqueous VL despite a suppressed plasma VL (escape). There were significant differences in CD4+ T-lymphocyte levels (p = 0.011 and p < 0.05) and ART duration (p = 0.007 and p < 0.05) between the patients with HIV-associated ocular complications and the patients without.</p><p><strong>Conclusion: </strong>This study provides a rationale for initiating ART early in the course of infection to reduce HIV VL in the aqueous humor, and raises the possibility of the ocular sanctuary where HIV replicates. Meanwhile, early and standard ART would be an optimal option to protect against ocular opportunistic infection.</p>","PeriodicalId":10911,"journal":{"name":"Current HIV Research","volume":" ","pages":"27-30"},"PeriodicalIF":1.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139048506","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Current HIV Research
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