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A Conversation with Olga Dudchenko
IF 12.7 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-12-11 DOI: 10.1021/acscentsci.4c0201010.1021/acscentsci.4c02010
Carolyn Wilke, 

The applied physicist discusses how the layout of ancient mammoth DNA revealed the animal’s biology.

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引用次数: 0
Spectroscopic Signatures of Phonon Character in Molecular Electron Spin Relaxation. 分子电子自旋弛豫中声子特征的光谱特征。
IF 12.7 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-12-11 eCollection Date: 2024-12-25 DOI: 10.1021/acscentsci.4c01177
Nathanael P Kazmierczak, Paul H Oyala, Ryan G Hadt

Spin-lattice relaxation constitutes a key challenge for the development of quantum technologies, as it destroys superpositions in molecular quantum bits (qubits) and magnetic memory in single molecule magnets (SMMs). Gaining mechanistic insight into the spin relaxation process has proven challenging owing to a lack of spectroscopic observables and contradictions among theoretical models. Here, we use pulse electron paramagnetic resonance (EPR) to profile changes in spin relaxation rates (T 1) as a function of both temperature and magnetic field orientation, forming a two-dimensional data matrix. For randomly oriented powder samples, spin relaxation anisotropy changes dramatically with temperature, delineating multiple regimes of relaxation processes for each Cu(II) molecule studied. We show that traditional T 1 fitting approaches cannot reliably extract this information. Single-crystal T 1 anisotropy experiments reveal a surprising change in spin relaxation symmetry between these two regimes. We interpret this switch through the concept of a spin relaxation tensor, enabling discrimination between delocalized lattice phonons and localized molecular vibrations in the two relaxation regimes. Variable-temperature T 1 anisotropy thus provides a unique spectroscopic method to interrogate the character of nuclear motions causing spin relaxation and the loss of quantum information.

自旋晶格弛豫是量子技术发展的一个关键挑战,因为它破坏了分子量子比特(qubits)和单分子磁体(SMMs)中的磁存储器的叠加态。由于缺乏光谱观测和理论模型之间的矛盾,获得自旋弛豫过程的机制洞察力已被证明具有挑战性。在这里,我们使用脉冲电子顺磁共振(EPR)来描述自旋弛豫速率(t1)作为温度和磁场方向的函数的变化,形成一个二维数据矩阵。对于随机取向的粉末样品,自旋弛豫各向异性随温度发生显著变化,描绘了所研究的每个Cu(II)分子的多种弛豫过程。我们发现传统的t1拟合方法不能可靠地提取这些信息。单晶t1各向异性实验揭示了这两种体制之间自旋弛豫对称性的惊人变化。我们通过自旋弛豫张量的概念来解释这种转换,从而能够区分两种弛豫机制中的离域晶格声子和局部分子振动。因此,变温t1各向异性提供了一种独特的光谱方法来询问引起自旋弛豫和量子信息损失的核运动的特征。
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引用次数: 0
Stationary DNA Origami Register Drives Fast Sequential DNA Computing
IF 12.7 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-12-11 DOI: 10.1021/acscentsci.4c0200610.1021/acscentsci.4c02006
Pu Deng, Jiahao Lin and Wei Sun*, 

Solid-state DNA origami registers, integrating liquid-phase DNA circuits, enable faster, scalable, and reliable molecular computations.

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引用次数: 0
A Conversation with Olga Dudchenko. 与Olga Dudchenko的对话。
IF 12.7 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-12-11 eCollection Date: 2024-12-25 DOI: 10.1021/acscentsci.4c02010
Carolyn Wilke
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引用次数: 0
Stationary DNA Origami Register Drives Fast Sequential DNA Computing. 静止DNA折纸寄存器驱动快速序列DNA计算。
IF 12.7 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-12-11 eCollection Date: 2024-12-25 DOI: 10.1021/acscentsci.4c02006
Pu Deng, Jiahao Lin, Wei Sun
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引用次数: 0
High-Speed Sequential DNA Computing Using a Solid-State DNA Origami Register
IF 12.7 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-12-11 DOI: 10.1021/acscentsci.4c0155710.1021/acscentsci.4c01557
Qian Zhang, Mingqiang Li, Yuqing Tang, Jinyan Zhang, Chenyun Sun, Yaya Hao, Jianing Cheng, Xiaodong Xie, Sisi Jia*, Hui Lv*, Fei Wang* and Chunhai Fan*, 

DNA computing leverages molecular reactions to achieve diverse information processing functions. Recently developed DNA origami registers, which could be integrated with DNA computing circuits, allow signal transmission between these circuits, enabling DNA circuits to perform complex tasks in a sequential manner, thereby enhancing the programming space and compatibility with various biomolecules of DNA computing. However, these registers support only single-write operations, and the signal transfer involves cumbersome and time-consuming register movements, limiting the speed of sequential computing. Here, we designed a solid-state DNA origami register that compresses output data from a 3D solution to a 2D surface, establishing a rewritable register suitable for solid-state storage. We developed a heterogeneous integration architecture of liquid-state circuits and solid-state registers, reducing the register-mediated signal transfer time between circuits to less than 1 h, thereby achieving fast sequential DNA computing. Furthermore, we designed a trace signal amplifier to read surface-stored signals back into solution. This compact approach not only enhances the speed of sequential DNA computing but also lays the foundation for the visual debugging and automated execution of DNA molecular algorithms.

This work developed a solid-state DNA origami register, with which a heterogeneous integration architecture is established and high-speed sequential DNA computing is demonstrated.

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引用次数: 0
The Utility of Cyclodextrin for Countering μ-Opioid Receptor Drug Overdoses. 环糊精在抗μ-阿片受体药物过量中的应用。
IF 12.7 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-12-10 eCollection Date: 2024-12-25 DOI: 10.1021/acscentsci.4c01990
Noriko Ogawa
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引用次数: 0
The Utility of Cyclodextrin for Countering μ-Opioid Receptor Drug Overdoses
IF 12.7 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-12-10 DOI: 10.1021/acscentsci.4c0199010.1021/acscentsci.4c01990
Noriko Ogawa*, 

A new cyclodextrin derivative, Subetadex-α-methyl, holds promise as a medical countermeasure for fentanyl and related opioid overdoses.

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引用次数: 0
Cyclic Ruthenium-Peptide Prodrugs Penetrate the Blood–Brain Barrier and Attack Glioblastoma upon Light Activation in Orthotopic Zebrafish Tumor Models
IF 12.7 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-12-09 DOI: 10.1021/acscentsci.4c0117310.1021/acscentsci.4c01173
Liyan Zhang, Gangyin Zhao, Trevor Dalrymple, Yurii Husiev, Hildert Bronkhorst, Gabriel Forn-Cuní, Bruno Lopes-Bastos, Ewa Snaar-Jagalska* and Sylvestre Bonnet*, 

The blood–brain barrier (BBB) presents one of the main obstacles to delivering anticancer drugs in glioblastoma. Herein, we investigated the potential of a series of cyclic ruthenium-peptide conjugates as photoactivated therapy candidates for the treatment of this aggressive tumor. The three compounds studied, Ru-p(HH), Ru-p(MH), and Ru-p(MM) ([Ru(Ph2phen)2(Ac-X1RGDX2-NH2)]Cl2 with Ph2phen = 4,7-diphenyl-1,10-phenanthroline and X1, X2 = His or Met), include an integrin-targeted pentapeptide coordinated to a ruthenium warhead via two photoactivated ruthenium–X1,2 bonds. Their photochemistry, activation mechanism, tumor targeting, and antitumor activity were meticulously addressed. A combined in vitro and in vivo study revealed that the photoactivated cell-killing mechanism and their O2 dependence were strongly influenced by the nature of X1 and X2. Ru-p(MM) was shown to be a photoactivated chemotherapy (PACT) drug, while Ru-p(HH) behaved as a photodynamic therapy (PDT) drug. All conjugates, however, showed comparable antitumor targeting and efficacy toward human glioblastoma 3D spheroids and orthotopic glioblastoma tumor models in zebrafish embryos. Most importantly, in this model, all three compounds could effectively cross the BBB, resulting in excellent targeting of the tumors in the brain.

We show the excellent blood−brain barrier crossing properties, tumor targeting, and antitumor activity of three cyclic ruthenium-peptide phototherapeutic conjugates for the treatment of glioblastoma.

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引用次数: 0
Cyclic Ruthenium-Peptide Prodrugs Penetrate the Blood-Brain Barrier and Attack Glioblastoma upon Light Activation in Orthotopic Zebrafish Tumor Models. 环钌肽原药可穿透血脑屏障,并在直位斑马鱼肿瘤模型中通过光激活攻击胶质母细胞瘤。
IF 12.7 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-12-09 eCollection Date: 2024-12-25 DOI: 10.1021/acscentsci.4c01173
Liyan Zhang, Gangyin Zhao, Trevor Dalrymple, Yurii Husiev, Hildert Bronkhorst, Gabriel Forn-Cuní, Bruno Lopes-Bastos, Ewa Snaar-Jagalska, Sylvestre Bonnet

The blood-brain barrier (BBB) presents one of the main obstacles to delivering anticancer drugs in glioblastoma. Herein, we investigated the potential of a series of cyclic ruthenium-peptide conjugates as photoactivated therapy candidates for the treatment of this aggressive tumor. The three compounds studied, Ru-p(HH), Ru-p(MH), and Ru-p(MM) ([Ru(Ph2phen)2 (Ac-X1RGDX2-NH2)]Cl2 with Ph2phen = 4,7-diphenyl-1,10-phenanthroline and X1, X2 = His or Met), include an integrin-targeted pentapeptide coordinated to a ruthenium warhead via two photoactivated ruthenium-X1,2 bonds. Their photochemistry, activation mechanism, tumor targeting, and antitumor activity were meticulously addressed. A combined in vitro and in vivo study revealed that the photoactivated cell-killing mechanism and their O2 dependence were strongly influenced by the nature of X1 and X2. Ru-p(MM) was shown to be a photoactivated chemotherapy (PACT) drug, while Ru-p(HH) behaved as a photodynamic therapy (PDT) drug. All conjugates, however, showed comparable antitumor targeting and efficacy toward human glioblastoma 3D spheroids and orthotopic glioblastoma tumor models in zebrafish embryos. Most importantly, in this model, all three compounds could effectively cross the BBB, resulting in excellent targeting of the tumors in the brain.

血脑屏障(BBB)是胶质母细胞瘤中抗癌药物输送的主要障碍之一。在此,我们研究了一系列环钌肽偶联物作为光激活治疗候选物治疗这种侵袭性肿瘤的潜力。所研究的三个化合物Ru-p(HH), Ru-p(MH)和Ru-p(MM) ([Ru(Ph2phen)2 (Ac-X1RGDX2-NH2)]Cl2, Ph2phen = 4,7-二苯基-1,10-菲罗啉,X1, X2 = His或Met)包括一个整合素靶向的五肽,通过两个光激活的钌-X1,2键与钌战斗部配合。对它们的光化学、活化机制、肿瘤靶向和抗肿瘤活性进行了详细的阐述。体外和体内联合研究表明,光激活细胞杀伤机制及其对O2的依赖性受到X1和X2性质的强烈影响。Ru-p(MM)表现为光活化化疗(PACT)药物,而Ru-p(HH)表现为光动力治疗(PDT)药物。然而,所有缀合物对斑马鱼胚胎中的人类胶质母细胞瘤3D球体和原位胶质母细胞瘤模型均显示出相当的抗肿瘤靶向性和有效性。最重要的是,在这个模型中,这三种化合物都能有效地穿过血脑屏障,从而对大脑中的肿瘤产生极好的靶向作用。
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