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Design of Light Driven Hole Bifurcating Proteins 光驱动孔分岔蛋白的设计
IF 10.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-08-27 DOI: 10.1021/acscentsci.5c00803
Xiao Huang, , , Jonathon L. Yuly, , , Peng Zhang, , , William F. DeGrado, , , Michael J. Therien, , and , David N. Beratan*, 

Electron bifurcation reactions divide electrons from two-electron donors into high- and low-energy pools by transporting charge on spatially separated low- and high-potential electron hopping pathways. Bifurcation delivers electrons at potentials that drive downstream reactions in photosynthesis, respiration, and biocatalysis. Recent theoretical studies have described the requirements for effective ground-state electron bifurcation. The aim of this study is to design synthetic bifurcation constructs that can be driven by light. We describe a strategy to bifurcate holes (oxidizing equivalents) efficiently with light, and we present an illustrative energy landscape that could support this design. The design focuses on the electrochemical potentials and distances between cofactors. The analysis finds that hole bifurcation may be driven efficiently with light, guiding the further development of bioinspired networks that bifurcate charge and deliver the charges with prescribed electrochemical potentials.

Bioinspired light-driven hole bifurcating networks are designed based on de novo proteins, with the aim of separating holes into spatially separated pools at different electrochemical potentials.

电子分岔反应通过在空间分离的低势和高势电子跳跃路径上传输电荷,将来自双电子供体的电子分成高能和低能池。分岔以电位传递电子,驱动光合作用、呼吸作用和生物催化中的下游反应。最近的理论研究描述了有效基态电子分岔的要求。本研究的目的是设计可由光驱动的合成分岔结构。我们描述了一种用光有效地分叉孔(氧化当量)的策略,并提出了一个说明性的能量景观,可以支持这种设计。设计的重点是电化学电位和辅因子之间的距离。分析发现,光可以有效地驱动空穴分岔,从而指导进一步开发分岔电荷并以规定的电化学电位传递电荷的仿生网络。生物启发的光驱动孔分叉网络是基于新生蛋白设计的,目的是将不同电化学电位的孔分离成空间分离的池。
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引用次数: 0
A Conversation with Belén González-Gaya 与bel<s:1>的对话González-Gaya
IF 10.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-08-27 DOI: 10.1021/acscentsci.5c01511
XiaoZhi Lim, 

The environmental scientist hitched a ride on a tourist cruise to measure pollutants in Antarctica.

这位环境科学家搭上一艘旅游游轮去测量南极洲的污染物。
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引用次数: 0
Probing the Dynamic Strength of Biomolecular Interactions with Single-Cell Centrifugation 用单细胞离心探测生物分子相互作用的动态强度
IF 10.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-08-26 DOI: 10.1021/acscentsci.5c00648
Hans T. Bergal, , , Koji Kinoshita, , and , Wesley P. Wong*, 

Molecular interactions between receptors and ligands govern critical biological processes, from immune surveillance and T-cell activation to tissue development. However, current techniques for studying binding avidity often sacrifice throughput or precision. We introduce a high-throughput method for quantifying molecular and cellular binding kinetics using a centrifuge force microscope (CFM)─a compact imaging system integrated into a benchtop centrifuge. The CFM performs real-time force measurements on thousands of single cells in parallel, probing receptor–ligand interactions under controlled mechanical stress. To extend these capabilities, we developed a next-generation CFM with dual-channel fluorescence imaging that enables tracking of individual cell unbinding events. To demonstrate its utility, we profiled the binding mechanics of Bispecific T-cell Engager (BiTE) molecules, immunotherapeutic proteins that facilitate T-cell targeting of cancer cells. In cell–protein assays, we quantified the avidity of T and B cells interacting with BiTE-modified surfaces, revealing receptor-specific correlations between ligand concentration and bond strength. In cell–cell assays, we characterized BiTE-mediated adhesion between Jurkat and Nalm6 cells, demonstrating a time-dependent increase in avidity. By integrating force spectroscopy with fluorescence imaging, the CFM provides a high-throughput approach for investigating the mechanochemical principles underlying receptor-mediated interactions, with broad implications for biophysical chemistry, molecular recognition, and therapeutic development.

A high-throughput Centrifuge Force Microscope enables parallel, force-based unbinding studies of molecules or cells, using fluorescence to image single-cell immunological interactions.

受体和配体之间的分子相互作用控制着关键的生物过程,从免疫监视和t细胞活化到组织发育。然而,目前研究结合亲和度的技术往往牺牲了吞吐量或精度。我们介绍了一种使用离心力显微镜(CFM)定量分子和细胞结合动力学的高通量方法──一种集成在台式离心机中的紧凑成像系统。CFM对数千个单细胞并行进行实时力测量,在受控的机械应力下探测受体-配体相互作用。为了扩展这些功能,我们开发了具有双通道荧光成像的下一代CFM,可以跟踪单个细胞解结合事件。为了证明其实用性,我们分析了双特异性t细胞接合器(BiTE)分子的结合机制,这是一种促进t细胞靶向癌细胞的免疫治疗蛋白。在细胞蛋白检测中,我们量化了T细胞和B细胞与bite修饰表面相互作用的频率,揭示了配体浓度和结合强度之间的受体特异性相关性。在细胞-细胞分析中,我们表征了Jurkat细胞和Nalm6细胞之间咬介导的粘附,显示出时间依赖性的增加。通过将力光谱与荧光成像相结合,CFM为研究受体介导的相互作用背后的机械化学原理提供了高通量的方法,对生物物理化学、分子识别和治疗开发具有广泛的意义。高通量离心力显微镜可实现分子或细胞的平行、基于力的解结合研究,使用荧光成像单细胞免疫相互作用。
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引用次数: 0
Quantum Computing Based Design of Multivariate Porous Materials 基于量子计算的多元多孔材料设计
IF 10.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-08-22 DOI: 10.1021/acscentsci.5c00918
Shinyoung Kang, , , Younghun Kim, , and , Jihan Kim*, 

Multivariate (MTV) porous materials exhibit unique structural complexities based on their diverse spatial arrangements of multiple building block combinations. These materials possess potential synergistic functionalities that exceed the sum of their individual components. However, the exponentially increasing design complexity of these materials poses significant challenges for accurate ground-state configuration prediction and design. To address this, we propose a Hamiltonian model for quantum computing that integrates compositional, structural, and balance constraints directly into the Hamiltonian, enabling efficient optimization of the MTV configurations. The model employs a graph-based representation to encode linker types as qubits. Our framework enables quantum encoding of a vast linker design space, allowing representation of exponentially many configurations with linearly scaling qubit resources, and facilitating efficient search for optimal structures based on predefined design variables. To validate our model, a variational quantum circuit was constructed and executed using the Sampling Variational Quantum Eigensolver (VQE) algorithm in the IBM Qiskit. Simulations on experimentally known MTV porous materials (e.g., Cu-THQ-HHTP, Py-MV-DBA-COF, MUF-7, and SIOC-COF2) successfully reproduced their ground-state configurations, demonstrating the validity of our model. Furthermore, VQE calculations were performed on a real IBM 127-qubit quantum hardware for validation purposes signaling a first step toward a practical quantum algorithm for the rational design of porous materials.

Quantum algorithms were developed to identify optimal multivariate porous material by exploring linker configurations encoded in qubits and were evaluated by the proposed Hamiltonian model.

多元(MTV)多孔材料表现出独特的结构复杂性,基于其不同的空间布局的多种构建模块组合。这些材料具有潜在的协同功能,超过其单个成分的总和。然而,这些材料的设计复杂性呈指数级增长,对精确的基态预测和设计提出了重大挑战。为了解决这个问题,我们提出了一个量子计算的哈密顿模型,该模型将组合、结构和平衡约束直接集成到哈密顿模型中,从而实现了MTV配置的有效优化。该模型采用基于图的表示将链接器类型编码为量子位。我们的框架能够对巨大的连接器设计空间进行量子编码,允许使用线性缩放的量子位资源表示指数级的许多配置,并促进基于预定义设计变量的最佳结构的有效搜索。为了验证我们的模型,使用IBM Qiskit中的采样变分量子特征求解器(VQE)算法构建并执行了变分量子电路。在实验中已知的MTV多孔材料(如Cu-THQ-HHTP、Py-MV-DBA-COF、MUF-7和SIOC-COF2)上的模拟成功地再现了它们的基态构型,证明了我们模型的有效性。此外,为了验证目的,在真实的IBM 127量子位量子硬件上进行了VQE计算,这标志着朝着合理设计多孔材料的实用量子算法迈出了第一步。开发了量子算法,通过探索编码在量子比特中的链接配置来识别最佳的多变量多孔材料,并通过提出的哈密顿模型进行了评估。
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引用次数: 0
Unveiling the Nanoconfinement Effect in CO2 Electroreduction to CH4 over Mesoporous Cu-CeO2 Nanospheres 揭示介孔Cu-CeO2纳米球上CO2电还原成CH4的纳米约束效应
IF 10.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-08-22 DOI: 10.1021/acscentsci.5c01035
Lei Xiong, , , Xianbiao Fu, , , Wenpu Fan, , , Jun Zhang, , , Zixuan Zheng, , , Shaojie Lu, , , Dong Wang, , , Mingze Hao, , and , Qin Yue*, 

Nanoconfinement provides a promising strategy to promote the electrochemical CO2 reduction reaction (CO2RR) owing to enhanced reactant enrichment and collision. However, the nanoconfinement influence on the CH4 selectivity from the CO2RR with related regulation mechanism is unclear. Herein, a series of mesoporous CeO2 loaded Cu catalysts with controllable pore size (1.3–5.5 nm) are designed to modulate the CO2RR selectivity to CH4. It is found that decreasing the pore size can apparently enhance the CO2RR performance while inhibiting the HER activity. Moreover, a volcano-type relationship between the CH4 selectivity and the pore diameter is observed among these catalysts, while Cu-mCeO2-3.0 (pore diameter of 3.0 nm) shows the highest CH4 Faradaic efficiency (66.1 ± 2.9%). The in situ experiments and DFT calculations illustrate that a smaller pore size with stronger confinement over Cu-mCeO2-x can promote the adsorption and transformation of reactants (*CO, *CHO, etc.) for CH4 production, but too narrow confined space (1.3 nm) will contribute to much higher intermediate coverage and promote their collision for C–C coupling to C2+ products instead, thus reducing the CH4 selectivity. This work provides designing insights into metal/oxide catalysts with controllable pore size to study the nanoconfinement effect on the CO2RR-to-CH4 activity, which can be extended to other oxide-based catalytic reactions.

This study establishes a correlation between the CO2RR-to-CH4 activity and the pore size of mesoporous Cu-CeO2 catalysts, elucidating the underlying regulation mechanisms.

纳米约束由于增强了反应物的富集和碰撞,为促进电化学CO2还原反应(CO2RR)提供了一种很有前途的策略。然而,纳米限制对CO2RR对CH4选择性的影响及其调控机制尚不清楚。本文设计了一系列具有可控孔径(1.3 ~ 5.5 nm)的CeO2负载Cu介孔催化剂,以调节CO2RR对CH4的选择性。研究发现,减小孔隙尺寸可以明显提高CO2RR的性能,同时抑制HER活性。其中Cu-mCeO2-3.0(孔径为3.0 nm)具有最高的CH4法拉第效率(66.1±2.9%)。原位实验和DFT计算表明,更小的孔径和更强的Cu-mCeO2-x约束可以促进反应物(*CO, *CHO等)的吸附和转化,从而产生CH4,但太窄的约束空间(1.3 nm)会导致更高的中间覆盖,从而促进它们的碰撞,使C-C耦合到C2+产物,从而降低CH4的选择性。本研究为研究纳米限制对co2rr - ch4活性的影响提供了设计思路,并可推广到其他基于氧化物的催化反应中。本研究建立了Cu-CeO2介孔催化剂的co2rr - ch4活性与孔径之间的相关性,阐明了其潜在的调控机制。
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引用次数: 0
Precisely Integrated Mesoporous Anode Enabling Fast Pseudocapacitive Sodium-Ion Storage 精确集成介孔阳极实现快速伪电容性钠离子存储
IF 10.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-08-18 DOI: 10.1021/acscentsci.5c00616
Shuang Li, , , Jiecheng Chen, , , Xin Miao, , , Xu Wen, , , You Zhou, , , Bingxian Chu, , , Wendi Wang, , , Yanyan Yu, , , Ziyang Guo*, , and , Kun Lan*, 

Sodium-ion batteries (SIBs) are considered potential alternatives to lithium-ion batteries (LIBs) due to the abundant resources and low sodium cost. The rational nanostructural design for anode materials plays a crucial role in SIBs. TiO2, as a common electrode material, suffers from the drawbacks of low specific surface area and poor conductivity. To overcome these limitations, we propose a strategy combining solvent evaporation-induced self-assembly and chemical oxidative polymerization to construct an ultrathin polypyrrole (PPy)-coated mesoporous TiO2 microsphere (meso-TiO2@PPy) core–shell structure. The combination of the mesoporous structure and the conductive coating endows the micrometer-sized TiO2 spheres with high specific surface area, excellent conductivity, and abundant sodium-ion diffusion pathways, leading to a dominant pseudocapacitance (94%) of total charge storage. Remarkably, such integration allows for a high reversible capacity of 160.6 mAh g–1 at 1 A g–1, good rate performance, and stable cycling performance (capacity retention of 80.8% after 2000 cycles). Our research provides a pathway for the design of compositive anode materials for high-performance SIBs.

A type of integrated mesoporous TiO2−PPy composite is designed as an anode to guarantee high surface area, tap density, and conductivity for overall enhancement of pseudocapacitive Na+ storage.

钠离子电池因其丰富的资源和低廉的钠成本被认为是锂离子电池的潜在替代品。阳极材料的合理纳米结构设计在sib中起着关键作用。TiO2作为一种常用的电极材料,存在比表面积低、导电性差的缺点。为了克服这些限制,我们提出了一种结合溶剂蒸发诱导自组装和化学氧化聚合的策略,构建了超薄聚吡咯(PPy)包覆的介孔TiO2微球(meso-TiO2@PPy)核壳结构。介孔结构和导电涂层的结合,使得微米级TiO2球具有高比表面积、优异的导电性和丰富的钠离子扩散途径,从而在总电荷存储中占主导地位的赝电容(94%)。值得注意的是,这种集成允许在1 a g-1时具有160.6 mAh g-1的高可逆容量,良好的倍率性能和稳定的循环性能(2000次循环后容量保持率为80.8%)。我们的研究为高性能sib复合负极材料的设计提供了一条途径。设计了一种集成介孔TiO2−PPy复合材料作为阳极,以保证高表面积,轻接密度和电导率,从而全面增强假电容性Na+存储。
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引用次数: 0
A Long-Lost Coffee Bean Tastes as Good as the Best─To Understand Why, Scientists Turn to Chemistry 失传已久的咖啡豆味道和最好的一样好──为了了解其中的原因,科学家们求助于化学
IF 10.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-08-18 DOI: 10.1021/acscentsci.5c01454
Marta Zaraska, 

The climate-resistant bean boasts a chemical profile similar to Arabica’s.

这种耐气候的咖啡豆拥有与阿拉比卡咖啡豆相似的化学成分。
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引用次数: 0
Tuning the Ultimate Strain of Single and Double Network Gels Through Reactive Strand Extension 通过反应链延伸调节单双网凝胶的极限应变
IF 10.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-08-15 DOI: 10.1021/acscentsci.5c00932
Xujun Zheng, , , Chun-Yu Chiou, , , Sunay Dilara Ekim, , , Tatiana B. Kouznetsova, , , Jafer Vakil, , , Yixin Hu, , , Liel Sapir, , , Danyang Chen, , , Zi Wang, , , Michael Rubinstein, , , Jian Ping Gong, , , Nancy R. Sottos*, , and , Stephen L. Craig*, 

The stretchability (ability to be elongated) and toughness (capacity to absorb energy before breaking) of polymer network materials, such as elastomers and hydrogels, often determine their utility and lifetime. Direct correlations between the molecular behavior of polymer network components and the physical properties of the network inform the design of materials with enhanced performance, extended lifetime, and minimized waste stream. Here, we report the impact of the fused ring size in bicyclic cyclobutane mechanophores within the strands of polymer network gels. The mechanophores and their polymer strands share the same initial covalent contour length, whereas the capacity for reactive strand extension (RSE) is varied by changing the size of the ring fused to the cyclobutane from 5 to 12 carbon atoms. We observe the first evidence of covalent RSE effects in a single-network gel, and strands with greater RSE lead to gels with greater stretchability and toughness. The same qualitative correlation between molecular and macroscopic extension is also observed in DN hydrogels with mechanophores in the prestretched first network.

The strain at break of polymer network materials can be tuned by varying the molecular length hidden behind embedded cyclobutane mechanophores.

弹性体和水凝胶等聚合物网络材料的拉伸性(被拉长的能力)和韧性(断裂前吸收能量的能力)通常决定了它们的使用寿命。聚合物网络组分的分子行为与网络的物理性质之间的直接关系为材料的设计提供了信息,这些材料具有增强的性能、延长的使用寿命和最小化的废物流。在这里,我们报告了在聚合物网络凝胶链内的双环环丁烷机械载体的融合环尺寸的影响。机械载体和它们的聚合物链具有相同的初始共价轮廓长度,而反应链延伸(RSE)的能力是通过改变与环丁烷融合的5到12个碳原子的环的大小而变化的。我们在单网凝胶中观察到共价RSE效应的第一个证据,具有更大RSE的链导致凝胶具有更大的拉伸性和韧性。在预拉伸第一网络中具有机械载体的DN水凝胶中,也观察到分子和宏观延伸之间同样的定性相关性。通过改变嵌入环丁烷机械载体后的分子长度,可以调节聚合物网络材料断裂时的应变。
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引用次数: 0
Optical Control of Membrane Viscosity Modulates ER-to-Golgi Trafficking 膜粘度的光学控制调节er到高尔基体的运输
IF 10.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-08-12 DOI: 10.1021/acscentsci.5c00606
Noemi Jiménez-Rojo, , , Suihan Feng, , , Johannes Morstein*, , , Stefanie D. Pritzl, , , Antonino Asaro, , , Sergio López, , , Yun Xu, , , Takeshi Harayama, , , Nynke A. Vepřek, , , Christopher J. Arp, , , Martin Reynders, , , Alexander J. E. Novak, , , Evgeny Kanshin, , , Jan Lipfert, , , Beatrix Ueberheide, , , Manuel Muñiz, , , Theobald Lohmüller, , , Howard Riezman*, , and , Dirk Trauner*, 

The lipid composition of cellular membranes is highly dynamic and undergoes continuous remodeling, affecting the biophysical properties critical to biological function. Here, we introduce an optical approach to manipulate membrane viscosity based on an exogenous synthetic fatty acid with an azobenzene photoswitch, termed FAAzo4. Cells rapidly incorporate FAAzo4 into phosphatidylcholine and phosphatidylethanolamine in a concentration- and cell type-dependent manner. This generates photoswitchable PC and PE analogs, which are predominantly located in the endoplasmic reticulum. Irradiation causes a rapid photoisomerization that decreases membrane viscosity with high spatiotemporal precision. We use the resulting “PhotoCells” to study the impact of membrane viscosity on ER-to-Golgi transport and demonstrate that this two-step process has distinct membrane viscosity requirements. Our approach provides an unprecedented way of manipulating membrane biophysical properties directly in living cells and opens novel avenues to probe the effects of viscosity in a wide variety of biological processes.

PhotoCells enable the dynamic control of protein viscosity in living cells. A decrease of membrane viscosity increases the amount of protein recruited at ERES but slows down the transport to Golgi.

细胞膜的脂质组成是高度动态的,并经历不断的重塑,影响对生物功能至关重要的生物物理特性。在这里,我们介绍了一种光学方法来操纵膜粘度基于外源合成脂肪酸与偶氮苯光开关,称为FAAzo4。细胞以浓度和细胞类型依赖的方式迅速将FAAzo4结合到磷脂酰胆碱和磷脂酰乙醇胺中。这产生了可光切换的PC和PE类似物,它们主要位于内质网中。辐照引起快速光异构化,以高时空精度降低膜粘度。我们使用得到的“光电池”来研究膜粘度对er到高尔基转运的影响,并证明这两步过程具有不同的膜粘度要求。我们的方法提供了一种前所未有的直接在活细胞中操纵膜生物物理特性的方法,并为探索粘度在各种生物过程中的影响开辟了新的途径。光电池能够动态控制活细胞中的蛋白质粘度。膜黏度的降低增加了ERES募集的蛋白质数量,但减缓了向高尔基体的转运。
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引用次数: 0
Artificial Chiral Trinuclear Zn Catalysts: Design, Self-Assembly and Unprecedented Efficiency in Asymmetric Hydroboration of Ketones 人工手性三核锌催化剂:酮类不对称硼氢化反应的设计、自组装和空前效率
IF 10.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-08-12 DOI: 10.1021/acscentsci.5c01067
Jingxi He, , , Shuxin Jiang, , , Yu Qiu, , , Yingchao Liu, , , Kuiling Ding*, , and , Xiaoming Wang*, 

The development of artificial catalysts with efficiency that can rival those of Nature’s enzymes represents one of the foremost yet challenging goals in homogeneous metal catalysis. Inspired by the exceptional performance of metalloenzymes, the design and development of highly efficient bi/multinuclear catalysts via judicious ligand design, by taking advantage of the cooperative action of the proximal catalytic sites, has attracted great attention. Herein, we report the self-assembly of a chiral hexadentate BINOL-dipyox ligand with zinc acetate into a well-defined trinuclear zinc complex, which demonstrated ultrahigh catalytic productivity in the enantioselective hydroboration of ketones with an unprecedented turnover number (TON) of 19,400 at an extremely low catalyst loading (0.005 mol %). Mechanistic investigations reveal that a cooperative Lewis acid activation mode is operating in the catalytic process, hence, underscoring the unique advantages of the trinuclear architecture.

This work reports the rational design and self-assembly of an artificial chiral trinuclear zinc catalyst, which exhibits exceptional efficiency in enantioselective ketone hydroboration.

开发具有与自然界酶相媲美的效率的人工催化剂是均相金属催化领域最重要但最具挑战性的目标之一。受到金属酶的优异性能的启发,通过合理设计配体,利用近端催化位点的协同作用来设计和开发高效的双/多核催化剂引起了人们的广泛关注。本文报道了手性六齿BINOL-dipyox配体与醋酸锌自组装成一个定义良好的三核锌配合物,在极低的催化剂负载(0.005 mol %)下,以前所未有的19,400的周转率(TON)在酮的对映选择性硼化反应中表现出超高的催化效率。机理研究表明,协同Lewis酸活化模式在催化过程中起作用,因此,强调了三核结构的独特优势。本文报道了一种人工手性三核锌催化剂的合理设计和自组装,该催化剂在对映选择性酮硼氢化反应中表现出优异的效率。
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引用次数: 0
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