Pub Date : 2026-02-02DOI: 10.1007/s12672-026-04412-7
Jie Deng, Zixin Shu, Hui Yang, Bo Yang, Yuzhi Li, Xiang Sun
{"title":"Construction of immune related genes predictive models of elderly rectal cancer patients based on machine learning.","authors":"Jie Deng, Zixin Shu, Hui Yang, Bo Yang, Yuzhi Li, Xiang Sun","doi":"10.1007/s12672-026-04412-7","DOIUrl":"https://doi.org/10.1007/s12672-026-04412-7","url":null,"abstract":"","PeriodicalId":11148,"journal":{"name":"Discover. Oncology","volume":" ","pages":""},"PeriodicalIF":2.9,"publicationDate":"2026-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146104291","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-02DOI: 10.1007/s12672-026-04456-9
Rana R El Sadda
The glutathione (GSH) redox system plays a central role in maintaining cellular homeostasis, but its dysregulation in cancer contributes to tumor progression, therapy resistance, and metabolic adaptation. Elevated intracellular GSH levels represent both a barrier to conventional therapies and an opportunity to design redox-responsive drug delivery systems. In recent years, GSH has emerged as a promising therapeutic trigger and biomarker, driving the development of nanotechnology-enabled platforms for controlled drug release, imaging, and theranostics. This review provides a critical and translational analysis of GSH-responsive nanomedicine, highlighting chemical strategies such as disulfide/diselenide linkages, transition metal systems, and GSH-activated prodrugs. Unlike prior reviews, which often present descriptive overviews, this article emphasizes comparative evaluation of design principles, biological mechanisms, and translational hurdles, including biosafety, tumor heterogeneity, and large-scale manufacturability. We further outline future perspectives such as hybrid multifunctional nanoplatforms, patient-specific redox profiling, and clinical pathways for regulatory approval. By integrating insights from redox biology and nanotechnology, this review offers a timely and original perspective on the opportunities and challenges of exploiting tumor redox imbalance for precision drug delivery and cancer therapy.
{"title":"Glutathione responsive nanomedicine leverages tumor redox imbalance for targeted cancer theranostics.","authors":"Rana R El Sadda","doi":"10.1007/s12672-026-04456-9","DOIUrl":"10.1007/s12672-026-04456-9","url":null,"abstract":"<p><p>The glutathione (GSH) redox system plays a central role in maintaining cellular homeostasis, but its dysregulation in cancer contributes to tumor progression, therapy resistance, and metabolic adaptation. Elevated intracellular GSH levels represent both a barrier to conventional therapies and an opportunity to design redox-responsive drug delivery systems. In recent years, GSH has emerged as a promising therapeutic trigger and biomarker, driving the development of nanotechnology-enabled platforms for controlled drug release, imaging, and theranostics. This review provides a critical and translational analysis of GSH-responsive nanomedicine, highlighting chemical strategies such as disulfide/diselenide linkages, transition metal systems, and GSH-activated prodrugs. Unlike prior reviews, which often present descriptive overviews, this article emphasizes comparative evaluation of design principles, biological mechanisms, and translational hurdles, including biosafety, tumor heterogeneity, and large-scale manufacturability. We further outline future perspectives such as hybrid multifunctional nanoplatforms, patient-specific redox profiling, and clinical pathways for regulatory approval. By integrating insights from redox biology and nanotechnology, this review offers a timely and original perspective on the opportunities and challenges of exploiting tumor redox imbalance for precision drug delivery and cancer therapy.</p>","PeriodicalId":11148,"journal":{"name":"Discover. Oncology","volume":" ","pages":"288"},"PeriodicalIF":2.9,"publicationDate":"2026-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146104244","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-02DOI: 10.1007/s12672-026-04388-4
Bo Tang, Zhiyong Hu, Lele Nie, Junhua Ai, Qunguang Jiang
Background: Emerging evidence highlights the significant role of Neutrophil Extracellular Traps (NETs) in hepatocellular carcinoma (HCC), but the underlying molecular mechanisms involving NETs formation remain incompletely understood. This study aims to identify key biomarkers related to NETs in HCC through bioinformatic analysis.
Methods: We obtained RNA sequencing data of hepatocellular carcinoma tissues and adjacent normal liver tissues from the Gene Expression Omnibus (GEO) databases, followed by data correction, integration, and annotation. Subsequently, differentially expressed genes (DEGs) were identified, and Weighted Gene Co-expression Network Analysis (WGCNA) was used to screen for disease-related genes. The intersection with NETs-related genes (NRGs) yielded differentially expressed NET-related genes (DENRGs), which were subjected to single-sample Gene Set Enrichment Analysis (ssGSEA). Three machine learning models (LASSO, SVM-RFE, and RF) were further employed to screen for key biomarkers. Receiver Operating Characteristic (ROC) curves and a nomogram model were used to validate the diagnostic and predictive efficacy of those key biomarkers, with further validation using an external dataset. Unsupervised clustering and Gene Set Variation Analysis (GSVA) were performed on the key biomarkers.
Results: We conducted a comprehensive bioinformatic analysis on 223 HCC samples and 127 normal liver tissue samples from 5 datasets. Transcriptomic analysis identified 826 DEGs. WGCNA revealed key gene modules associated with HCC, including 362 genes. By intersecting these with 627 NRGs, we identified 18 DENRGs. The results of ssGSEA showed that most of immune cells were significantly downregulated in HCC. Machine learning models (LASSO, SVM-RFE, and RF) identified three downregulated biomarkers (ECM1, DNASE1L3, JUN). A nomogram and ROC curves confirmed the diagnostic accuracy of these biomarkers. Cluster analysis revealed two distinct HCC subtypes with different immune microenvironment characteristics. Drug-gene interaction analysis identified potential inhibitors targeting DNASE1L3 and JUN.
Conclusion: This study identified NET-related key biomarkers (ECM1, DNASE1L3, JUN) as reliable diagnostic tools for HCC, highlighting their diagnostic and therapeutic potential, and providing insights for HCC diagnostic tools and immunotherapy strategies.
背景:新出现的证据强调了中性粒细胞胞外陷阱(NETs)在肝细胞癌(HCC)中的重要作用,但涉及NETs形成的潜在分子机制仍不完全清楚。本研究旨在通过生物信息学分析,确定HCC中与NETs相关的关键生物标志物。方法:从Gene Expression Omnibus (GEO)数据库中获取肝细胞癌组织及邻近正常肝组织的RNA测序数据,并对数据进行校正、整合和注释。随后,鉴定差异表达基因(DEGs),并使用加权基因共表达网络分析(WGCNA)筛选疾病相关基因。与nets相关基因(NRGs)的交集产生差异表达的net相关基因(DENRGs),并对其进行单样本基因集富集分析(ssGSEA)。三种机器学习模型(LASSO, SVM-RFE和RF)进一步用于筛选关键生物标志物。使用受试者工作特征(ROC)曲线和nomogram模型来验证这些关键生物标志物的诊断和预测功效,并使用外部数据集进行进一步验证。对关键生物标志物进行无监督聚类和基因集变异分析(GSVA)。结果:我们对来自5个数据集的223例HCC样本和127例正常肝组织样本进行了全面的生物信息学分析。转录组学分析鉴定出826个deg。WGCNA揭示了与HCC相关的关键基因模块,包括362个基因。通过与627个nrg相交,我们确定了18个DENRGs。ssGSEA结果显示,大多数免疫细胞在HCC中显著下调。机器学习模型(LASSO、SVM-RFE和RF)鉴定出三种下调的生物标志物(ECM1、DNASE1L3、JUN)。nomogram和ROC曲线证实了这些生物标志物的诊断准确性。聚类分析显示两种不同的HCC亚型具有不同的免疫微环境特征。结论:本研究确定了net相关的关键生物标志物(ECM1、DNASE1L3、JUN)是HCC的可靠诊断工具,突出了它们的诊断和治疗潜力,为HCC的诊断工具和免疫治疗策略提供了见解。
{"title":"Identification and validation of NETs-related biomarkers in hepatocellular carcinoma through bioinformatics analysis and machine learning algorithms.","authors":"Bo Tang, Zhiyong Hu, Lele Nie, Junhua Ai, Qunguang Jiang","doi":"10.1007/s12672-026-04388-4","DOIUrl":"https://doi.org/10.1007/s12672-026-04388-4","url":null,"abstract":"<p><strong>Background: </strong>Emerging evidence highlights the significant role of Neutrophil Extracellular Traps (NETs) in hepatocellular carcinoma (HCC), but the underlying molecular mechanisms involving NETs formation remain incompletely understood. This study aims to identify key biomarkers related to NETs in HCC through bioinformatic analysis.</p><p><strong>Methods: </strong>We obtained RNA sequencing data of hepatocellular carcinoma tissues and adjacent normal liver tissues from the Gene Expression Omnibus (GEO) databases, followed by data correction, integration, and annotation. Subsequently, differentially expressed genes (DEGs) were identified, and Weighted Gene Co-expression Network Analysis (WGCNA) was used to screen for disease-related genes. The intersection with NETs-related genes (NRGs) yielded differentially expressed NET-related genes (DENRGs), which were subjected to single-sample Gene Set Enrichment Analysis (ssGSEA). Three machine learning models (LASSO, SVM-RFE, and RF) were further employed to screen for key biomarkers. Receiver Operating Characteristic (ROC) curves and a nomogram model were used to validate the diagnostic and predictive efficacy of those key biomarkers, with further validation using an external dataset. Unsupervised clustering and Gene Set Variation Analysis (GSVA) were performed on the key biomarkers.</p><p><strong>Results: </strong>We conducted a comprehensive bioinformatic analysis on 223 HCC samples and 127 normal liver tissue samples from 5 datasets. Transcriptomic analysis identified 826 DEGs. WGCNA revealed key gene modules associated with HCC, including 362 genes. By intersecting these with 627 NRGs, we identified 18 DENRGs. The results of ssGSEA showed that most of immune cells were significantly downregulated in HCC. Machine learning models (LASSO, SVM-RFE, and RF) identified three downregulated biomarkers (ECM1, DNASE1L3, JUN). A nomogram and ROC curves confirmed the diagnostic accuracy of these biomarkers. Cluster analysis revealed two distinct HCC subtypes with different immune microenvironment characteristics. Drug-gene interaction analysis identified potential inhibitors targeting DNASE1L3 and JUN.</p><p><strong>Conclusion: </strong>This study identified NET-related key biomarkers (ECM1, DNASE1L3, JUN) as reliable diagnostic tools for HCC, highlighting their diagnostic and therapeutic potential, and providing insights for HCC diagnostic tools and immunotherapy strategies.</p>","PeriodicalId":11148,"journal":{"name":"Discover. Oncology","volume":" ","pages":""},"PeriodicalIF":2.9,"publicationDate":"2026-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146104297","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-02DOI: 10.1007/s12672-026-04442-1
Omar Hamdy, Hedaa Atwa, Ekbal Elkhouli, Ahmed H Ata, Radwa M Abdelsattar, Maryam Dawood, Shadi Awny, Mohamed Ezat
Introduction: Hürthle cell carcinoma (HCC) -recently known as oncocytic carcinoma- is a rare type of differentiated thyroid cancer that presents a diagnostic and therapeutic challenge because of its morphological heterogeneity and uncertain biological behavior.
Methods: This retrospective single-center cohort study included all the patients with HCC who underwent surgical treatment in our center from January 2009 to May 2024. The epidemiological, clinical, and oncological data of the included patients were analyzed.
Results: This study included nineteen cases of HCC (9 males and 10 females). The average age at diagnosis was 54.8 ± 12.2 years. Preoperative fine needle aspiration cytology (FNAC) classified 2 tumors as Bethesda I, 7 as Bethesda III, 6 as Bethesda IV, and 4 as Bethesda V. A variety of surgical procedures were used, including hemithyroidectomy in 3 patients and total thyroidectomy in 12 patients. Two patients underwent neck dissection. The median tumor size was 6.7 cm. Pathological evaluation identified 9 patients with unifocal lesions and 10 with multifocal lesions. Only one patient showed positive lymph node involvement. The median times to death, distant metastasis, and locoregional recurrence were 4, 13, and 6 years, respectively. For locoregional recurrence, the restricted mean survival time (RMST) at five years was 4.4 years (95% CI 3.9-4.9), 4.6 years (95% CI 4.1-5.0) for distant metastasis, and 4.1 years (95% CI 3.6-4.5) for overall survival. There was a trend towards worse prognosis in females, younger age, and those with primary surgery outside the center. These differences did not achieve statistical significance, at least partly due to the small sample size.
Conclusion: Diagnosing HCC remains challenging due to its overlapping features with other thyroid conditions, making fine-needle aspiration cytology less definitive. Surgical treatment remains the preferred therapeutic option. Age, gender, and the volume of the surgical center for the initial procedure can influence patient outcomes, particularly recurrence and survival rates.
肝细胞癌(HCC)是一种罕见的分化型甲状腺癌,由于其形态异质性和不确定的生物学行为,给诊断和治疗带来了挑战。方法:本回顾性单中心队列研究纳入2009年1月至2024年5月在我中心接受手术治疗的所有HCC患者。对纳入患者的流行病学、临床和肿瘤学资料进行分析。结果:本研究纳入19例HCC(男性9例,女性10例)。平均诊断年龄为54.8±12.2岁。术前细针穿刺细胞学检查(FNAC)将2例肿瘤归为Bethesda I型,7例为Bethesda III型,6例为Bethesda IV型,4例为Bethesda v型。采用多种手术方式,其中3例为甲状腺半腺切除术,12例为甲状腺全切除术。2例患者行颈部清扫术。中位肿瘤大小6.7 cm。病理检查发现9例为单灶性病变,10例为多灶性病变。仅有1例患者淋巴结受累。中位死亡时间、远处转移时间和局部复发时间分别为4年、13年和6年。对于局部复发,5年的限制平均生存时间(RMST)为4.4年(95% CI 3.9-4.9),远处转移为4.6年(95% CI 4.1-5.0),总生存期为4.1年(95% CI 3.6-4.5)。在女性、年轻和非中心手术的患者中有预后较差的趋势。这些差异没有达到统计学意义,至少部分原因是样本量小。结论:HCC的诊断仍然具有挑战性,由于其与其他甲状腺疾病的重叠特征,使得细针穿刺细胞学不太确定。手术治疗仍是首选的治疗方法。年龄、性别和初始手术中心的容积会影响患者的预后,尤其是复发率和生存率。
{"title":"Epidemiology and prognostic factors of Hürthle-oncocytic cell carcinoma of the thyroid.","authors":"Omar Hamdy, Hedaa Atwa, Ekbal Elkhouli, Ahmed H Ata, Radwa M Abdelsattar, Maryam Dawood, Shadi Awny, Mohamed Ezat","doi":"10.1007/s12672-026-04442-1","DOIUrl":"https://doi.org/10.1007/s12672-026-04442-1","url":null,"abstract":"<p><strong>Introduction: </strong>Hürthle cell carcinoma (HCC) -recently known as oncocytic carcinoma- is a rare type of differentiated thyroid cancer that presents a diagnostic and therapeutic challenge because of its morphological heterogeneity and uncertain biological behavior.</p><p><strong>Methods: </strong>This retrospective single-center cohort study included all the patients with HCC who underwent surgical treatment in our center from January 2009 to May 2024. The epidemiological, clinical, and oncological data of the included patients were analyzed.</p><p><strong>Results: </strong>This study included nineteen cases of HCC (9 males and 10 females). The average age at diagnosis was 54.8 ± 12.2 years. Preoperative fine needle aspiration cytology (FNAC) classified 2 tumors as Bethesda I, 7 as Bethesda III, 6 as Bethesda IV, and 4 as Bethesda V. A variety of surgical procedures were used, including hemithyroidectomy in 3 patients and total thyroidectomy in 12 patients. Two patients underwent neck dissection. The median tumor size was 6.7 cm. Pathological evaluation identified 9 patients with unifocal lesions and 10 with multifocal lesions. Only one patient showed positive lymph node involvement. The median times to death, distant metastasis, and locoregional recurrence were 4, 13, and 6 years, respectively. For locoregional recurrence, the restricted mean survival time (RMST) at five years was 4.4 years (95% CI 3.9-4.9), 4.6 years (95% CI 4.1-5.0) for distant metastasis, and 4.1 years (95% CI 3.6-4.5) for overall survival. There was a trend towards worse prognosis in females, younger age, and those with primary surgery outside the center. These differences did not achieve statistical significance, at least partly due to the small sample size.</p><p><strong>Conclusion: </strong>Diagnosing HCC remains challenging due to its overlapping features with other thyroid conditions, making fine-needle aspiration cytology less definitive. Surgical treatment remains the preferred therapeutic option. Age, gender, and the volume of the surgical center for the initial procedure can influence patient outcomes, particularly recurrence and survival rates.</p>","PeriodicalId":11148,"journal":{"name":"Discover. Oncology","volume":" ","pages":""},"PeriodicalIF":2.9,"publicationDate":"2026-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146104294","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-01DOI: 10.1007/s12672-026-04490-7
Peter Francis Raguindin, Anne Maas, Anica Ilic, Cristina Priboi, Katharina Roser, Ahmed Farrag, Freimut Schilling, Ursula Tanriver, Tamara Diesch-Furlanetto, Katrin Scheinemann, Gisela Michel
Background: Resilience is the dynamic ability to adapt to adversity using personal and social resources. Childhood cancer represents a major family stressor, and grandparents often provide emotional, practical, and financial support. Yet, their psychosocial outcomes and resilience remain poorly understood. We aimed to: (1) identify resilience trajectories (2), examine their association with post-traumatic stress symptoms, and (3) determine factors influencing resilience.
Methods: This multicenter cohort study included grandparents of children recently diagnosed with cancer and treated at one of eight participating pediatric oncology centers in Switzerland. Eligible grandparents were recruited and completed questionnaires at 3-, 6-, 12-, and 24- months post-diagnosis. Resilience (CD-RISC 10), post-traumatic stress symptoms (IES-R), information needs, health literacy (HLS-EU-Q12), partnership quality, and social support (MSPSS) were measured. We used group-based trajectory modeling to identify resilience trajectories (Aim 1), linear mixed models to examine associations of resilience trajectories with post-traumatic stress symptoms (Aim 2), and linear mixed-effects models to identify the internal and external resources for resilience (Aim 3).
Results: We included data of 41 grandparents of 20 children with cancer. Mean age was 67.6 years; most were grandmothers (n = 25, 61%), unemployed or retired (n = 23, 59%), and partnered (n = 35, 90%). Two resilience trajectories emerged within two years after diagnosis: low-stable (n = 17, 43%) and high-declining (n = 23, 57%). Grandparents in the low-stable group reported significantly higher post-traumatic stress symptoms (β: -19.8, 90% CI -29.2, -10.4, p < 0.001). The following internal resources were positively associated with resilience: higher health literacy (β: 0.31, 90% CI 0.20, 0.42, p < 0.001), more information received (β: 1.53, 90% CI 1.27, 1.79, p < 0.001), and having income that meets needs (β: 7.56, 90% CI 1.86, 13.26, p = 0.029). No external resources showed significant associations.
Conclusion: Timely, clear, and tailored information may help strengthen grandparents' resilience and reduce stress.
{"title":"Resilience and post-traumatic stress symptoms in grandparents following their grandchild's cancer diagnosis from a multicenter cohort study in Switzerland (The GROKids project).","authors":"Peter Francis Raguindin, Anne Maas, Anica Ilic, Cristina Priboi, Katharina Roser, Ahmed Farrag, Freimut Schilling, Ursula Tanriver, Tamara Diesch-Furlanetto, Katrin Scheinemann, Gisela Michel","doi":"10.1007/s12672-026-04490-7","DOIUrl":"https://doi.org/10.1007/s12672-026-04490-7","url":null,"abstract":"<p><strong>Background: </strong>Resilience is the dynamic ability to adapt to adversity using personal and social resources. Childhood cancer represents a major family stressor, and grandparents often provide emotional, practical, and financial support. Yet, their psychosocial outcomes and resilience remain poorly understood. We aimed to: (1) identify resilience trajectories (2), examine their association with post-traumatic stress symptoms, and (3) determine factors influencing resilience.</p><p><strong>Methods: </strong>This multicenter cohort study included grandparents of children recently diagnosed with cancer and treated at one of eight participating pediatric oncology centers in Switzerland. Eligible grandparents were recruited and completed questionnaires at 3-, 6-, 12-, and 24- months post-diagnosis. Resilience (CD-RISC 10), post-traumatic stress symptoms (IES-R), information needs, health literacy (HLS-EU-Q12), partnership quality, and social support (MSPSS) were measured. We used group-based trajectory modeling to identify resilience trajectories (Aim 1), linear mixed models to examine associations of resilience trajectories with post-traumatic stress symptoms (Aim 2), and linear mixed-effects models to identify the internal and external resources for resilience (Aim 3).</p><p><strong>Results: </strong>We included data of 41 grandparents of 20 children with cancer. Mean age was 67.6 years; most were grandmothers (n = 25, 61%), unemployed or retired (n = 23, 59%), and partnered (n = 35, 90%). Two resilience trajectories emerged within two years after diagnosis: low-stable (n = 17, 43%) and high-declining (n = 23, 57%). Grandparents in the low-stable group reported significantly higher post-traumatic stress symptoms (β: -19.8, 90% CI -29.2, -10.4, p < 0.001). The following internal resources were positively associated with resilience: higher health literacy (β: 0.31, 90% CI 0.20, 0.42, p < 0.001), more information received (β: 1.53, 90% CI 1.27, 1.79, p < 0.001), and having income that meets needs (β: 7.56, 90% CI 1.86, 13.26, p = 0.029). No external resources showed significant associations.</p><p><strong>Conclusion: </strong>Timely, clear, and tailored information may help strengthen grandparents' resilience and reduce stress.</p>","PeriodicalId":11148,"journal":{"name":"Discover. Oncology","volume":" ","pages":""},"PeriodicalIF":2.9,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146099997","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-01DOI: 10.1007/s12672-026-04492-5
Mokhtar Rejili
{"title":"Clinical advances and challenges of antibody-mediated targeted drug delivery in breast cancer therapeutics.","authors":"Mokhtar Rejili","doi":"10.1007/s12672-026-04492-5","DOIUrl":"https://doi.org/10.1007/s12672-026-04492-5","url":null,"abstract":"","PeriodicalId":11148,"journal":{"name":"Discover. Oncology","volume":" ","pages":""},"PeriodicalIF":2.9,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100025","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Objective: This study aims to explore shared key genes between head and neck neoplasm (HNN) and aging.
Methods: Using single-cell RNA sequencing data of peripheral blood from HNSCC patients, aging individuals, and healthy controls, we identified cross-group co-expressed, downregulated cell subpopulations as core targets. Integrated pseudotime trajectory analysis and intercellular communication modeling were employed to investigate the dynamic evolution and functional interaction patterns of these subpopulations. Differentially expressed genes were identified, followed by Mendelian randomization (MR) analysis to assess their causal associations with HNN. Co-localization analysis was performed using GWAS data for HNN and expression quantitative trait loci (eQTL) datasets. Key genes were further subjected to metabolic pathway enrichment analysis.
Results: T cell subsets were found to be represented in both HNN and aging. Among them, CD4_naive T cells were down-regulated in both groups, leading to the identification of 24 differentially expressed genes. MR studies have shown that CCR, LEF1, NOSIP and FHIT have causal relationships with HNN. In the validation phase, however, only FHIT was retained, for which co-localization analysis revealed limited evidence of a shared causal variant between the GWAS and eQTL signals (H4 = 0.01). The metabolic enrichment highlighted metabolic pathways associated with these genes.
Conclusions: This study identified CD4_naive T cells down-regulation as a shared feature of HNN and aging and highlighted FHIT as potential molecular links. These findings may provide novel insights into the intersection of aging and tumorigenesis based on MR and single-cell analysis, offering potential targets for combined therapeutic strategies.
{"title":"Single-cell and Mendelian analyses reveal shared mechanisms between head and neck neoplasms and aging.","authors":"Chen Sun, Xinlei Chen, Jinzhao Li, Lirong Hu, Rui Shi, Chunhui Li, Canli Wang","doi":"10.1007/s12672-026-04550-y","DOIUrl":"10.1007/s12672-026-04550-y","url":null,"abstract":"<p><strong>Objective: </strong>This study aims to explore shared key genes between head and neck neoplasm (HNN) and aging.</p><p><strong>Methods: </strong>Using single-cell RNA sequencing data of peripheral blood from HNSCC patients, aging individuals, and healthy controls, we identified cross-group co-expressed, downregulated cell subpopulations as core targets. Integrated pseudotime trajectory analysis and intercellular communication modeling were employed to investigate the dynamic evolution and functional interaction patterns of these subpopulations. Differentially expressed genes were identified, followed by Mendelian randomization (MR) analysis to assess their causal associations with HNN. Co-localization analysis was performed using GWAS data for HNN and expression quantitative trait loci (eQTL) datasets. Key genes were further subjected to metabolic pathway enrichment analysis.</p><p><strong>Results: </strong>T cell subsets were found to be represented in both HNN and aging. Among them, CD4_naive T cells were down-regulated in both groups, leading to the identification of 24 differentially expressed genes. MR studies have shown that CCR, LEF1, NOSIP and FHIT have causal relationships with HNN. In the validation phase, however, only FHIT was retained, for which co-localization analysis revealed limited evidence of a shared causal variant between the GWAS and eQTL signals (H4 = 0.01). The metabolic enrichment highlighted metabolic pathways associated with these genes.</p><p><strong>Conclusions: </strong>This study identified CD4_naive T cells down-regulation as a shared feature of HNN and aging and highlighted FHIT as potential molecular links. These findings may provide novel insights into the intersection of aging and tumorigenesis based on MR and single-cell analysis, offering potential targets for combined therapeutic strategies.</p>","PeriodicalId":11148,"journal":{"name":"Discover. Oncology","volume":" ","pages":"221"},"PeriodicalIF":2.9,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12868321/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100090","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-01DOI: 10.1007/s12672-026-04548-6
Ziqi Gong, Yuxian Feng, Jing Tu
{"title":"Prediction of immunotherapeutic responses by a classifier model based on inflammation-associated tumor microenvironment signatures in colorectal cancer.","authors":"Ziqi Gong, Yuxian Feng, Jing Tu","doi":"10.1007/s12672-026-04548-6","DOIUrl":"https://doi.org/10.1007/s12672-026-04548-6","url":null,"abstract":"","PeriodicalId":11148,"journal":{"name":"Discover. Oncology","volume":" ","pages":""},"PeriodicalIF":2.9,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100081","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-01DOI: 10.1007/s12672-026-04536-w
Yang Wang, Jingyu Peng, Mingke Qiu, Yuxin Dai, Shuqing Wang, Jingmin Ou, Junkai Yan
Background: Approximately 10% of the patients with infantile hemangioma (IH) may exhibit resistance to propranolol (PRN) therapy, and thus alternative strategies are required. Our previous studies reported that oxymatrine (OMT) could inhibit the growth of hemangiomas, however the underlying pharmacological actions have not been fully addressed.
Methods: In this study, a murine IH model was constructed by implantation of EOMA cells into nude mice. OMT was administrated (50 mg/kg; i.p) for 21 days. Metabolic changes were examined by proteomics and metabolomics, followed by in vitro experimental validation using EOMA cells.
Results: OMT significantly suppressed the growth of hemangioma in vivo without significant adverse effects. A total of 869 differentially expressed proteins and 38 metabolites were identified. In addition to canonical apoptosis regulation, OMT also caused significant metabolic disturbances, particularly in purine and pyrimidine metabolism. Furthermore, ferroptosis may be involved in the therapeutic effect of OMT. In the validation experiments in vitro, we found that OMT dose-dependently reduced the viability of EOMA cells, concomitant with increased production of lipid reactive oxygen species (ROS) and Fe2 + accumulation.
Conclusions: In conclusion, these findings suggested that treatment with OMT could suppress the growth of hemangiomas through metabolic disturbances and inducing ferroptosis, which may provide new insights to the management of IH.
{"title":"Multi-omics unravels multiple pharmacological actions in a murine model of infantile hemangioma receiving oxymatrine therapy.","authors":"Yang Wang, Jingyu Peng, Mingke Qiu, Yuxin Dai, Shuqing Wang, Jingmin Ou, Junkai Yan","doi":"10.1007/s12672-026-04536-w","DOIUrl":"https://doi.org/10.1007/s12672-026-04536-w","url":null,"abstract":"<p><strong>Background: </strong>Approximately 10% of the patients with infantile hemangioma (IH) may exhibit resistance to propranolol (PRN) therapy, and thus alternative strategies are required. Our previous studies reported that oxymatrine (OMT) could inhibit the growth of hemangiomas, however the underlying pharmacological actions have not been fully addressed.</p><p><strong>Methods: </strong>In this study, a murine IH model was constructed by implantation of EOMA cells into nude mice. OMT was administrated (50 mg/kg; i.p) for 21 days. Metabolic changes were examined by proteomics and metabolomics, followed by in vitro experimental validation using EOMA cells.</p><p><strong>Results: </strong>OMT significantly suppressed the growth of hemangioma in vivo without significant adverse effects. A total of 869 differentially expressed proteins and 38 metabolites were identified. In addition to canonical apoptosis regulation, OMT also caused significant metabolic disturbances, particularly in purine and pyrimidine metabolism. Furthermore, ferroptosis may be involved in the therapeutic effect of OMT. In the validation experiments in vitro, we found that OMT dose-dependently reduced the viability of EOMA cells, concomitant with increased production of lipid reactive oxygen species (ROS) and Fe2 + accumulation.</p><p><strong>Conclusions: </strong>In conclusion, these findings suggested that treatment with OMT could suppress the growth of hemangiomas through metabolic disturbances and inducing ferroptosis, which may provide new insights to the management of IH.</p>","PeriodicalId":11148,"journal":{"name":"Discover. Oncology","volume":" ","pages":""},"PeriodicalIF":2.9,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100089","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-01DOI: 10.1007/s12672-026-04531-1
Xinyao Zhu, Yuqi Li, Zhiyu Liu, Qilong Wu, Qingfu Deng
<p><strong>Background: </strong>Preservatives, widely used in food and skincare products, may influence prostate cancer (PCa) development. This study explores the effects of common preservatives, especially parabens, on PCa and their potential molecular associations via computational and database-based analyses.</p><p><strong>Methods: </strong>This study identified potential preservative targets linked to prostate cancer through database screening (Swiss Target Prediction, STITCH, GeneCards) and extracted overlapping genes for Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses. A core gene network was constructed via the STRING database and Cytoscape software, and the top 20 genes by interaction strength were further analyzed using 10 machine learning algorithms to develop an optimal prognostic model. Multivariate Cox regression identified key genes as independent prognostic factors, which were preliminarily evaluated via molecular docking for preservative binding affinity. Tissue expression differences of these genes were also confirmed using the Human Protein Atlas (HPA).</p><p><strong>Results: </strong>This study identified 135 preservative-PCa-related genes; GO enrichment analysis showed these genes were mainly involved in apoptosis regulation, oxidative stress, signal transduction, and biosynthesis processes, while KEGG enrichment analysis linked them to endocrine resistance, chemical carcinogenesis, and lipid metabolism. The results of the machine learning prediction model showed that the Ridge model achieved the best prediction performance among the combinations of 101 prediction models with a C-index score of 0.709 and was validated across four external datasets (Cambridge, Taylor, CancerMap, GEO46602). Multivariate Cox regression identified 8 key genes (AR, BCL2L1, CASP3, CDK1, HDAC6, MMP2, PIK3CA, XIAP) as independent PCa prognostic factors-with AR, CASP3, CDK1, HDAC6, MMP2 as risk factors and BCL2L1, PIK3CA, XIAP as protective factors. Molecular docking showed all 8 genes could bind spontaneously to four parabens (methylparaben, ethylparaben, propylparaben, butylparaben), and HPA data confirmed significant expression differences of these genes between normal prostate and PCa tissues.</p><p><strong>Conclusion: </strong>This study uses computational and database-based approaches to systematically explore potential associations between parabens and PCa, identifying 8 key genes that may mediate this association and providing a theoretical foundation for formulating safer preservative usage guidelines and exploring PCa prognostic markers. Importantly, the current findings are derived from in silico prediction and public database analysis, not from experimental verification involving paraben exposure controls. The study identifies potential correlations rather than verifying direct molecular mechanisms of parabens in PCa; thus, it generates valuable scientific hypotheses that require further validation
{"title":"A comprehensive analysis reveals the molecular mechanisms linking preservatives to prostate cancer risk.","authors":"Xinyao Zhu, Yuqi Li, Zhiyu Liu, Qilong Wu, Qingfu Deng","doi":"10.1007/s12672-026-04531-1","DOIUrl":"https://doi.org/10.1007/s12672-026-04531-1","url":null,"abstract":"<p><strong>Background: </strong>Preservatives, widely used in food and skincare products, may influence prostate cancer (PCa) development. This study explores the effects of common preservatives, especially parabens, on PCa and their potential molecular associations via computational and database-based analyses.</p><p><strong>Methods: </strong>This study identified potential preservative targets linked to prostate cancer through database screening (Swiss Target Prediction, STITCH, GeneCards) and extracted overlapping genes for Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses. A core gene network was constructed via the STRING database and Cytoscape software, and the top 20 genes by interaction strength were further analyzed using 10 machine learning algorithms to develop an optimal prognostic model. Multivariate Cox regression identified key genes as independent prognostic factors, which were preliminarily evaluated via molecular docking for preservative binding affinity. Tissue expression differences of these genes were also confirmed using the Human Protein Atlas (HPA).</p><p><strong>Results: </strong>This study identified 135 preservative-PCa-related genes; GO enrichment analysis showed these genes were mainly involved in apoptosis regulation, oxidative stress, signal transduction, and biosynthesis processes, while KEGG enrichment analysis linked them to endocrine resistance, chemical carcinogenesis, and lipid metabolism. The results of the machine learning prediction model showed that the Ridge model achieved the best prediction performance among the combinations of 101 prediction models with a C-index score of 0.709 and was validated across four external datasets (Cambridge, Taylor, CancerMap, GEO46602). Multivariate Cox regression identified 8 key genes (AR, BCL2L1, CASP3, CDK1, HDAC6, MMP2, PIK3CA, XIAP) as independent PCa prognostic factors-with AR, CASP3, CDK1, HDAC6, MMP2 as risk factors and BCL2L1, PIK3CA, XIAP as protective factors. Molecular docking showed all 8 genes could bind spontaneously to four parabens (methylparaben, ethylparaben, propylparaben, butylparaben), and HPA data confirmed significant expression differences of these genes between normal prostate and PCa tissues.</p><p><strong>Conclusion: </strong>This study uses computational and database-based approaches to systematically explore potential associations between parabens and PCa, identifying 8 key genes that may mediate this association and providing a theoretical foundation for formulating safer preservative usage guidelines and exploring PCa prognostic markers. Importantly, the current findings are derived from in silico prediction and public database analysis, not from experimental verification involving paraben exposure controls. The study identifies potential correlations rather than verifying direct molecular mechanisms of parabens in PCa; thus, it generates valuable scientific hypotheses that require further validation ","PeriodicalId":11148,"journal":{"name":"Discover. Oncology","volume":" ","pages":""},"PeriodicalIF":2.9,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100044","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}