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Fast ERG 15 Hz flicker protocol for assessing functional changes in the rod system. 用于评估杆系统功能变化的快速ERG 15hz闪烁协议。
IF 2.9 4区 医学 Q2 OPHTHALMOLOGY Pub Date : 2025-07-27 DOI: 10.1007/s10633-025-10038-x
Aleksandra Czarnek-Chudzik, Giulia Righetti, Ronja Jung, Melanie Kempf, Veronica Cuevas Villanueva, Katarzyna Nowomiejska, Robert Rejdak, Eberhart Zrenner, Katarina Stingl, Krunoslav Stingl

Purpose: To establish a clinically applicable dark-adapted 15 Hz flicker electroretinogram (ERG) for sensitive detection of functional changes in the fast and the slow retinal rod pathways.

Methods: The study consisted of two parts. In the first part, the paradigm of the previously demonstrated "null-effect" of stimulus luminance on ERG-amplitudes for 15 Hz flicker stimuli with duration of 2.5 s was reexamined. In the second part an optimized faster protocol designed for routine clinical use was tested and compared with the results from the first part and data published in the past. The 15-Hz flicker ERG protocol included 12 steps with different intensities ranging from 0.00019 scot cd.s/m2 to 0.05 scot cd.s/m2 and was obtained from 15 normally sighted subjects. Stimulus flashes were presented in blue (448 nm) and white, alternating in each luminance step after 20 min of dark adaptation. A shorter version containing only 7 steps was selected with intensities ranging from 0.00031 scot cd.s/m2 to 0.005 scot cd.s/m2. Additionally, the stimulus paradigm included noise measurement to properly estimate the signal-to-noise ratio.

Results: The results from the first protocol showed a U-shaped amplitude vs. luminance response curve at 15 Hz, consistent with previously published results. Using the new, shortened protocol, we also obtained similar results, but with a much shorter recording time. Based on the signal-to-noise ratio from these measurements a reliable measurement can be obtained in only 2.5 min which presents a considerable time reduction necessary to record a 15 Hz response curve in a clinical setup.

Conclusion: The new protocol is suitable for integration into a daily clinical environment, offering short and well-balanced protocols to address complex retinal network interactions.

目的:建立一种临床适用的适应黑暗的15 Hz闪烁视网膜电图(ERG),用于灵敏检测视网膜快、慢视杆通路的功能变化。方法:本研究分为两部分。在第一部分中,我们重新验证了先前证明的刺激亮度对持续时间为2.5 s的15 Hz闪烁刺激的ergg振幅的“零效应”范式。在第二部分中,我们测试了一种优化的用于常规临床使用的快速方案,并与第一部分的结果和过去发表的数据进行了比较。15名正常视力受试者的15 hz闪烁ERG方案包括12个不同强度的步骤,范围从0.00019 scot cd.s/m2到0.05 scot cd.s/m2。刺激闪光以蓝色(448 nm)和白色呈现,在黑暗适应20 min后,每个亮度阶交替出现。选择仅包含7个步骤的较短版本,强度范围为0.00031 scot cd.s/m2至0.005 scot cd.s/m2。此外,刺激范式还包括噪声测量,以正确估计信噪比。结果:第一个方案的结果显示15 Hz时振幅与亮度响应曲线呈u形,与先前发表的结果一致。使用新的,缩短的协议,我们也得到了类似的结果,但用更短的记录时间。根据这些测量的信噪比,可以在2.5分钟内获得可靠的测量结果,这在临床设置中记录15hz响应曲线所需的时间大大减少。结论:新方案适合整合到日常临床环境中,为解决复杂的视网膜网络相互作用提供了简短而均衡的方案。
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引用次数: 0
Author index for the 2025 ISCEV symposium abstracts. 2025 ISCEV研讨会摘要作者索引。
IF 2.6 4区 医学 Q2 OPHTHALMOLOGY Pub Date : 2025-06-16 DOI: 10.1007/s10633-025-10032-3
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引用次数: 0
Evaluating the repeatability of the multifocal electroretinogram in the cone dominant 13-lined ground squirrel. 评价13纹地鼠视锥显性视网膜多焦电图的重复性。
IF 2.6 4区 医学 Q2 OPHTHALMOLOGY Pub Date : 2025-06-01 Epub Date: 2025-03-11 DOI: 10.1007/s10633-025-10010-9
Nicole Manfredonia, Hannah M Follett, Phyllis Summerfelt, James A Kuchenbecker, Joseph Carroll, Ching Tzu Yu

Purpose: To assess the repeatability of the multifocal electroretinogram (mfERG) in the 13-lined ground squirrel (13-LGS).

Methods: 13-LGS (Ictidomys tridecemlineatus, 2 M/4F, n = 12 eyes) were equally divided between 61-segment or 103-segment protocols containing two consecutive mfERG scans per session, and two total sessions performed one week apart per eye. The trough-to-peak amplitudes were analyzed under three conditions: raw, normalized to the optic nerve head (ONH), and normalized to the visual streak (VS). For intrasession repeatability, the two consecutive scans within each session were analyzed. For intersession repeatability analyses, one scan was randomly chosen from each day.

Results: Intrasession repeatability of the mfERG trough-to-peak amplitude data averaged at 63% (Raw), 55% (ONH), and 50% (VS). There was no significant difference in repeatability between each day's intrasession repeatability values for all normalization conditions (Raw: Wilcoxon t-test, p = 0.2334; ONH: Paired t-test, p = 0.7803; VS: Wilcoxon t-test, p = 0.3804). Intersession percent repeatability of mfERG trough-to-peak amplitude data averaged at 72% (Raw), 61% (ONH), and 53% (VS). There was a statistically significant difference between the groups (Friedman test, p = 0.0038). This was evident in the Benjamini-Hochberg method of controlling the false discovery rate (FDR) where there was a significant difference comparing Raw versus VS (p = 0.0130) and ONH versus VS (p = 0.0011). There was no difference comparing Raw versus ONH (p = 0.1076).

Conclusions: Overall intrasession and intersession repeatability of mfERG amplitude was relatively poor in our sample, though not markedly different than that reported in some other species and normalization methods did result in improved repeatability. As animal models are critical for vision research, these repeatability estimates will prove useful in interpreting future data collected following interventions or in longitudinal monitoring of disease models.

目的:评价13棱地鼠(13-LGS)视网膜多焦电图(mfERG)的可重复性。方法:将13只lgs (Ictidomys tridecemlineatus, 2 M/4F, n = 12只眼)平均分为61段或103段方案,每组连续进行两次mfERG扫描,每只眼间隔一周进行两次总扫描。在三种条件下分析波谷-波峰振幅:原始、归一化到视神经头(ONH)和归一化到视觉条纹(VS)。为了治疗期间的可重复性,我们分析了每次治疗期间的两次连续扫描。为了进行间歇可重复性分析,每天随机选择一次扫描。结果:mfERG波谷至波峰振幅数据的再现性平均为63% (Raw)、55% (ONH)和50% (VS)。在所有归一化条件下,每天的重复重复性值之间无显著差异(原始:Wilcoxon t检验,p = 0.2334;ONH:配对t检验,p = 0.7803;VS: Wilcoxon t检验,p = 0.3804)。mfERG波谷至峰值振幅数据的间歇可重复性平均为72% (Raw), 61% (ONH)和53% (VS)。两组间差异有统计学意义(Friedman检验,p = 0.0038)。这在benjamin - hochberg控制错误发现率(FDR)的方法中很明显,其中Raw与VS (p = 0.0130)和ONH与VS (p = 0.0011)之间存在显著差异。Raw与ONH比较无差异(p = 0.1076)。结论:在我们的样本中,mfERG振幅的整体内切和间切重复性相对较差,尽管与其他一些物种的报道没有显著差异,归一化方法确实提高了可重复性。由于动物模型对视觉研究至关重要,这些可重复性估计将被证明对解释干预后收集的未来数据或对疾病模型的纵向监测有用。
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引用次数: 0
DTL versus skin electrodes in recording of multifocal pattern electroretinogram and multifocal photopic negative response. DTL与皮肤电极记录多焦视网膜电图和多焦光负反应的比较。
IF 2.6 4区 医学 Q2 OPHTHALMOLOGY Pub Date : 2025-06-01 Epub Date: 2025-04-09 DOI: 10.1007/s10633-025-10014-5
Henrike Marie Nowitzki, Michael B Hoffmann, Khaldoon O Al-Nosairy

Objective: To compare the photopic negative response of the multifocal ERG (mfERGPhNR) and the multifocal pattern electroretinogram (mfPERG) using DTL electrode (EDTL) vs skin electrode (ESKIN) in healthy young and old adults.

Methods: Ten "Young" [20-27 years] and eight "Old" [60-72 years] participants took part in this study. The electrophysiological responses were recorded binocularly using EDTL and ESKIN. 5-way ANOVAs were applied to investigate the following factors on mfERGPhNR: i) ELECTRODE, ii) DILATATION, iii) AGE, iv) EYE, and v) ECCENTRICITY. For mfPERG, the same factors, except dilatation, were investigated applying 4-way ANOVAs. These were conducted for amplitude and peak time of different components as well as signal-to-noise-ratio (SNR).

Results: Amplitudes of mfERGPhNR [mfPERG]-based ESKIN recording were reduced to 32-38% [37-38%] compared to EDTL, p < 0.001 . This corresponded to SNR reduction to 80% [60%], p < 0.001 . ESKIN based responses had shorter peak times, by 0.2-0.5 ms for N1 and P1, p < 0.05 , [P1: 1.5 ms, p < 0.001 ]. Both age groups had comparable amplitudes and SNRs, but Young had shorter peak times, by 1.5-2.2 ms for N1 and P1, p < 0.05 [3.7-4.2 ms for N1, P1, N2, p < 0.05 ]. Compared to dilated recordings, undilated mfERGPhNR amplitudes were reduced to 47-87%, p < 0.01 , and peak times were delayed by 2.0-11.8 ms, p < 0.001 .

Conclusions: mfPERG & mfERGPhNR traces were similar for EDTL and ESKIN. However, for skin electrodes, amplitudes and SNRs were lower and peak times shorter. ESKIN thus seem to be a viable alternative in patients in whom the use of corneal electrodes is precluded, e.g., children and disabled patients, but at the expense of SNR and with reference to ESKIN normative data.

目的:比较DTL电极(EDTL)与皮肤电极(ESKIN)对健康青年和老年人多焦ERG (mfERGPhNR)和多焦图视网膜电图(mfPERG)的光负反应。方法:10名“青年”(20-27岁)和8名“老年”(60-72岁)参与本研究。电生理反应用EDTL和ESKIN双目记录。采用5-way anova分析mfERGPhNR的以下影响因素:i)电极,ii)扩张,iii)年龄,iv)眼睛,v)偏心。对于mfPERG,除扩张外,使用4-way anova分析相同的因素。对不同分量的幅值、峰值时间以及信噪比进行了分析。结果:与EDTL相比,基于mfERGPhNR [mfPERG]的ESKIN记录的振幅降低至32-38% [37-38%],p 0.001。这相当于信噪比降低了80% [60%],p 0.001。基于ESKIN的反应峰时间较短,N1和P1分别缩短0.2-0.5 ms, p < 0.05, [P1: 1.5 ms, p < 0.001]。两个年龄组的振幅和信噪比相当,但Young的峰值时间较短,N1和P1的峰值时间为1.5-2.2 ms, p 0.05 [N1, P1, N2的峰值时间为3.7-4.2 ms, p 0.05]。与扩张记录相比,未扩张记录的mfERGPhNR振幅降低至47-87% (p < 0.01),峰值时间延迟2.0-11.8 ms (p < 0.001)。结论:EDTL和ESKIN的mfPERG和mfERGPhNR迹线相似。然而,对于皮肤电极,振幅和信噪比更低,峰值时间更短。因此,对于不能使用角膜电极的患者,例如儿童和残疾患者,ESKIN似乎是一种可行的替代方案,但要以信噪比为代价,并参考ESKIN规范数据。
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引用次数: 0
Guest editorial: ISCEV Symposium 2025, Utrecht, The Netherlands. 嘉宾评论:ISCEV研讨会2025,荷兰乌得勒支。
IF 2.6 4区 医学 Q2 OPHTHALMOLOGY Pub Date : 2025-06-01 Epub Date: 2025-06-16 DOI: 10.1007/s10633-025-10033-2
Maria M van Genderen, Herman E Talsma
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引用次数: 0
Case of uveitis with increased electroretinographic amplitudes following Nivolumab and Ipilimumab administration for malignant melanoma. Nivolumab和Ipilimumab治疗恶性黑色素瘤后视网膜电图波幅增加的葡萄膜炎病例。
IF 2.6 4区 医学 Q2 OPHTHALMOLOGY Pub Date : 2025-06-01 Epub Date: 2025-03-12 DOI: 10.1007/s10633-025-10011-8
Kumiko Kato, Ryunosuke Nagashima, Hisashi Matsubara, Yuka Yonekawa, Yuzen Kashima, Keitaro Mizumoto, Mineo Kondo

Purpose: To report our flicker electroretinographic (ERG) findings in a patient who developed uveitis after treatment with immune checkpoint inhibitors (ICIs) for a metastatic malignant melanoma.

Methods: ERGs were used to monitor retinal physiology in a patient with ocular complications following systemic ICI administration. Flicker ERGs were recorded using the RETeval system before and after the ICI treatments.

Results: A 45-year-old woman was referred to our ophthalmologic clinic for baseline evaluations prior to initiating nivolumab/ipilimumab therapy. The patient had no ocular or ERG abnormalities at the initial visit, but three weeks after starting nivolumab/ipilimumab, she developed conjunctival hyperemia and tearing. Slit-lamp examination showed anterior chamber inflammation, and the ERGs showed a 40% increase in the amplitude from the baseline. However, optical coherence tomography (OCT) did not show any abnormalities. The anterior segment inflammation and increased ERG amplitude resolved with topical betamethasone. The patient developed significant liver damage after the second administration of nivolumab/ipilimumab, and this therapy was discontinued. Two steroid pulse therapies were followed by tapered oral prednisolone. During the follow-up period, no significant abnormalities were observed in the visual acuity or OCT images, but the ERG amplitudes increased from the first to the eighth month after the liver damage was detected. Five years later, the ERGs and OCT findings were within the normal limits, but she had developed a sunset glow fundus in both eyes.

Conclusion: ERGs may be a useful objective test for posterior inflammation induced by administration of ICIs that is not evident in OCT images.

目的:报告我们的闪烁视网膜电图(ERG)的发现,该患者在接受免疫检查点抑制剂(ICIs)治疗转移性恶性黑色素瘤后发生葡萄膜炎。方法:对1例全身注射ICI后出现眼部并发症的患者,采用眼电监测视网膜生理。使用RETeval系统记录ICI治疗前后的闪烁ERGs。结果:一名45岁的女性在开始纳武单抗/伊匹单抗治疗前被转到我们的眼科诊所进行基线评估。患者在初次就诊时没有眼部或ERG异常,但在开始使用nivolumab/ipilimumab三周后,她出现结膜充血和撕裂。裂隙灯检查显示前房炎症,脑电图显示较基线振幅增加40%。光学相干断层扫描(OCT)未见异常。外用倍他米松后,前段炎症和ERG振幅升高得以缓解。患者在第二次给予纳武单抗/伊匹单抗后出现明显的肝损伤,并停止该治疗。两种类固醇脉冲疗法之后是逐渐减少的口服强的松龙。随访期间,视力和OCT图像未见明显异常,但在肝损伤后1 ~ 8个月,ERG振幅有所增加。五年后,脑电图和OCT检查结果在正常范围内,但她的双眼出现了晚霞眼底。结论:对于在OCT图像上不明显的ICIs引起的后路炎症,ERGs可能是一个有用的客观测试。
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引用次数: 0
Aflibercept for the treatment of pigmentary retinopathy in Kearns-Sayre syndrome? 阿非利西普治疗卡恩斯-塞尔综合征的色素视网膜病变?
IF 2.6 4区 医学 Q2 OPHTHALMOLOGY Pub Date : 2025-06-01 Epub Date: 2025-05-20 DOI: 10.1007/s10633-025-10022-5
Josef Finsterer
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引用次数: 0
Phenotypic spectrum and theoretical prime editing analysis of WDR19-mediated retinal degeneration. wdr19介导的视网膜变性的表型谱和理论prime编辑分析。
IF 2.6 4区 医学 Q2 OPHTHALMOLOGY Pub Date : 2025-06-01 Epub Date: 2025-04-04 DOI: 10.1007/s10633-025-10016-3
Jorge Pincay, Bruna Lopes da Costa, Peter M J Quinn, Marilyn Rodriguez, Ashley Zhou, Maximilian D Kong, Janet R Sparrow, Stephen H Tsang

Purpose: The ciliopathies are a broad category of pleiotropic disease with numerous genes involved in pathogenesis. One of the genes implicated in the ciliopathies is WDR19, which can lead to several syndromic diseases that may manifest with a form of retinal degeneration. There is a lack of reporting on the WDR19-mediated retinal phenotype, and therefore warrants more clinical investigation. With retinal degeneration being the most prevalent symptom among the ciliopathies, phenotypic reporting is needed to enhance understanding of pathogenesis.

Methods: Clinical, imaging, and diagnostic records of patients with two variants in the WDR19 gene and a form of retinal degeneration were retrospectively reviewed. Two different individuals analyzed the variants in the studied patients using SnapGene (Version 4.3.11), employing both the canonical NGG PAM and the NGA PAM prime editors.

Results: Four patients from three families each carrying biallelic variants the WDR19 gene were reviewed. Two of the six unique variants identified among the patients were novel. Two identical twin patients presented with a recessive Stargardt (STGD)-like phenotype while the other two patients presented with a clinical picture more characteristic of retinitis pigmentosa (RP). Three of four patients had thickened external limiting membrane (ELM) on spectral-domain optical coherence tomography (SD-OCT). Full-field electroretinograms (ffERG) performed on two patients with the STGD-like phenotype showed a cone-rod pattern of degeneration. Quantitative short-wave fundus autofluorescence (qAF) performed on the two STGD-like patients was within the 95th percentile of normal eyes.

Conclusions: WDR19-mediated retinal degeneration is heterogenous in presentation, and in some cases can phenocopy STGD. The foveal sparing phenotype was apparent in three of four patients with relatively preserved visual acuity, which may serve as a retinal prognostic factor in patients with pathogenic variants in WDR19. All six variants evaluated are correctable by prime editing, establishing a foundation for future research in therapeutic development.

目的:纤毛病是一大类多效性疾病,其发病机制涉及多种基因。与纤毛病有关的基因之一是WDR19,它可导致几种综合征性疾病,可能表现为一种视网膜变性。关于wdr19介导的视网膜表型缺乏报道,因此需要更多的临床研究。由于视网膜变性是纤毛病中最常见的症状,需要表型报告以加强对发病机制的了解。方法:回顾性分析WDR19基因两种变异和一种视网膜变性患者的临床、影像学和诊断记录。两个不同的个体使用SnapGene (Version 4.3.11)分析了所研究患者的变异,同时使用了规范的NGG PAM和NGA PAM引物编辑器。结果:对来自3个家族的4例携带WDR19基因双等位变异的患者进行了综述。在患者中发现的六种独特变异中,有两种是新的。两名同卵双胞胎患者表现为隐性Stargardt (STGD)样表型,而另外两名患者的临床表现更具有色素性视网膜炎(RP)的特征。在光谱域光学相干断层扫描(SD-OCT)上,4例患者中有3例外限制膜(ELM)增厚。两名stgd样表型患者的全视场视网膜电图(ffERG)显示锥体-杆状变性。两例stgd样患者的定量短波眼底自身荧光(qAF)在正常眼的95百分位数以内。结论:wdr19介导的视网膜变性在表现上是异质的,在某些情况下可以表现为STGD。在4名相对保持视力的患者中,有3名患者的中央凹保留表型很明显,这可能是WDR19致病性变异患者的视网膜预后因素。所有评估的六种变异都可以通过启动编辑进行纠正,为未来的治疗开发研究奠定了基础。
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引用次数: 0
Comparison of ERG signal-to-noise ratios in simultaneous recordings with skin electrodes and contact lens electrodes. 使用皮肤电极和隐形眼镜电极同时记录 ERG 信噪比的比较。
IF 2.6 4区 医学 Q2 OPHTHALMOLOGY Pub Date : 2025-06-01 Epub Date: 2025-02-04 DOI: 10.1007/s10633-025-10003-8
Scott E Brodie, Promie Faruque, Jorge Pincay, Mohamed Sylla, Xuan Cui, Stephanie Choi, Karen Holopigian, Vivienne Greenstein

Purpose: To compare signal-to-noise levels in ERG recordings obtained with contact lens electrodes and adhesive skin electrodes.

Methods: 23 subjects were studied. Full-field ERGs were recorded according to ISCEV standards simultaneously with ERG-jet corneal contact lens electrodes and LKC Technologies Sensor Strip adhesive skin electrodes. B-wave amplitude or peak-to-peak amplitude was used as a measure of signal strength. Noise was estimated using the " ± averaging method." Comparisons between signal strength, absolute noise levels, and signal-to-noise ratios between contact lens and skin electrodes were performed by linear regression.

Results: Comparisons of signal strength for LA 3, 30-Hz, DA 0.01, and DA 3 responses, yielded regression coefficient ß values of 0.37, 0.39, 0.39, and 0.35, respectively. For the entire data set, the regression coefficient ß value was 0.36 (95% confidence limits 0.34 - 0.38). The grand average ERG noise for all ERG stimuli was 13.8 µV for contact lens electrodes and 13.0 µV for skin electrodes (not significant: p = 0.66 for paired t-test). For signal-to-noise ratios, regression ß coefficients for contact lens and adhesive skin electrodes for LA 3, 30-Hz, DA 0.01, and DA 3 stimuli were 0.25, 0.39, 0.50, and 0.36 respectively. The ß coefficient for the amalgamated data set was 0.33 (95% confidence limits 0.30- 0.36).

Conclusions: Overall ERG amplitudes obtained with skin electrodes were 1/3 those obtained with contact lens electrodes. Absolute noise levels were similar. Signal-to-noise levels with skin electrodes were 1/3 those seen with contact lens electrodes. Implications for signal-averaging in clinical applications are discussed.

目的:比较接触镜电极和皮肤粘附电极获得的电刺激记录的信噪比。方法:对23例受试者进行研究。根据ISCEV标准记录全场眼电,同时记录眼电喷射角膜接触镜电极和LKC Technologies Sensor Strip皮肤粘附电极。b波振幅或峰对峰振幅被用作信号强度的度量。采用“±平均法”估计噪声。通过线性回归比较隐形眼镜和皮肤电极之间的信号强度、绝对噪声水平和信噪比。结果:la3、30 hz、DA 0.01和DA 3的信号强度比较,回归系数分别为0.37、0.39、0.39和0.35。对于整个数据集,回归系数为0.36(95%置信限为0.34 - 0.38)。所有ERG刺激的平均ERG噪声在隐形眼镜电极上为13.8µV,在皮肤电极上为13.0µV(配对t检验p = 0.66)。对于信噪比,在la3、30-Hz、DA 0.01和DA 3刺激下,隐形眼镜和粘附皮肤电极的回归系数分别为0.25、0.39、0.50和0.36。合并数据集的ß系数为0.33(95%置信限0.30- 0.36)。结论:皮肤电极测得的整体电刺激振幅为隐形眼镜电极测得的1/3。绝对噪音水平相似。皮肤电极的信噪比是隐形眼镜电极的三分之一。讨论了信号平均在临床应用中的意义。
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引用次数: 0
The ERGtools2 package: a toolset for processing and analysing visual electrophysiology data. ERGtools2包:用于处理和分析视觉电生理数据的工具集。
IF 2.6 4区 医学 Q2 OPHTHALMOLOGY Pub Date : 2025-06-01 Epub Date: 2025-04-12 DOI: 10.1007/s10633-025-10017-2
Moritz Lindner

Purpose: To introduce ERGtools2, an open-source R package for processing, analysing and long-term storing visual electrophysiology data.

Methods: A dataset comprising Electroretinogram (ERG) recordings of C57Bl/6J mice, subjected to standard ISCEV stimuli, was used to present the functionality of ERGtools2. ERGtools2 stores and organizes all recordings, metadata, and measurement information from an individual examination in a single object, maintaining raw data throughout the analysis process.

Results: A standard workflow is presented exemplifying how ERGtools2 can be used to efficiently import, pre-process and analyse ERG data. Following this workflow, basic ERG measurements and visualisation of a single exam as well as group statistics are obtained. Moreover, special use cases are described, including for the handling of noisy data and the storage of data in the HDF5 format to ensure long-term preservation and accessibility.

Conclusions: ERGtools2 provides a comprehensive, flexible, and device-independent solution for visual electrophysiology data analysis. Its emphasis on maintaining raw data integrity, combined with advanced processing and analysis capabilities, makes it a useful tool for preclinical and clinical research applications. The open-source nature and the use of open data formats promote reproducibility and data sharing in visual neurosciences.

目的:介绍用于处理、分析和长期存储视觉电生理数据的开源R包ERGtools2。方法:使用标准ISCEV刺激下C57Bl/6J小鼠视网膜电图(ERG)记录数据集来展示ERGtools2的功能。ERGtools2存储和组织来自单个对象的单个检查的所有记录、元数据和测量信息,在整个分析过程中维护原始数据。结果:提出了一个标准的工作流程,举例说明如何使用ERGtools2有效地导入、预处理和分析ERG数据。按照这个工作流程,可以获得基本的ERG测量和单个检查的可视化以及组统计数据。此外,还描述了特殊用例,包括处理噪声数据和以HDF5格式存储数据,以确保长期保存和可访问性。结论:ERGtools2为视觉电生理数据分析提供了一个全面、灵活且与设备无关的解决方案。它强调保持原始数据的完整性,结合先进的处理和分析能力,使其成为临床前和临床研究应用的有用工具。开放源代码的性质和开放数据格式的使用促进了视觉神经科学的再现性和数据共享。
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引用次数: 0
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Documenta Ophthalmologica
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