Pub Date : 2025-12-22DOI: 10.1007/s10096-025-05373-5
Yan Yuan, Yuhong Zhou, Yanfeng Zhou, Rui Ye, Jingrun Lu, Yizhe Wang, Fang Wei, Fukuan He, Honglan Yu, Yu Wang
Background: (Candida glabrata C. glabrata) is classified as a high-priority pathogen by the World Health Organization (WHO). It causes mucosal and deep infections in immunocompromised individuals, yet its diagnosis currently relies on slow culture processes. This highlights the urgent need for rapid and accurate detection methods.
Methods: Ten primers targeting different regions of the C. glabrata ITS2 gene were designed to create a multiple cross displacement amplification (MCDA) assay coupled with a nanoparticle lateral flow biosensor (LFB). Following optimisation of temperature and time, the multiple cross displacement amplification coupled with lateral flow biosensor (MCDA-LFB) system was employed to detect C. glabrata DNA in clinical specimens.
Results: Under optimal conditions (63 °C, 40 min), the C. glabrata-MCDA-LFB assay achieved a limit of detection (LoD) of 10 fg/µL.The assay successfully detected all C. glabrata strains tested and demonstrated no cross-reactivity with non-C. glabrata isolates. Findings showed that the C. glabrata-MCDA-LFB assay promptly and successfully detected all 57 C. glabrata-positive samples among 240 clinical specimens identified by traditional culture methods. The entire process, including sample processing (20 min), the MCDA reaction (40 min) and result documentation (2 min), was completed within 62 min.
Conclusion: The C. glabrata-MCDA-LFB assay developed in this study is a rapid, simplified, sensitive and specific technique that is straightforward to use. It can be used to screen for or diagnose C. glabrata infections in clinical settings, particularly in regions with limited resources.
背景:光念珠菌(Candida glabrata C. glabrata)被世界卫生组织(WHO)列为高优先级病原体。它在免疫功能低下的个体中引起粘膜和深部感染,但其诊断目前依赖于缓慢的培养过程。这突出表明迫切需要快速和准确的检测方法。方法:设计了10条引物,分别针对光棘草ITS2基因的不同区域,利用纳米颗粒横向流动生物传感器(LFB)建立了多重交叉位移扩增(MCDA)实验。在温度和时间优化后,采用多重交叉位移扩增耦合侧流生物传感器(MCDA-LFB)系统检测临床标本中的光棘球蚴DNA。结果:在最佳条件(63°C, 40 min)下,C. glabrata-MCDA-LFB法的检出限(LoD)为10 fg/µL。该实验成功地检测了所有被测的光棘球蚴菌株,并且与非光棘球蚴无交叉反应。glabrata隔离。结果表明,采用传统培养方法鉴定的240例临床标本中,glabrata-MCDA-LFB快速、成功地检测出57例glabrata阳性标本。整个过程,包括样品处理(20分钟),MCDA反应(40分钟)和结果记录(2分钟),在62分钟内完成。结论:本研究建立的裸鼠mcda - lfb测定方法具有快速、简便、灵敏、特异的特点。它可用于筛查或诊断临床环境中的光滑锥体感染,特别是在资源有限的地区。
{"title":"Establishment and application of multiple cross displacement amplification coupled with lateral flow biosensor (MCDA-LFB) for visual and rapid detection of Candida glabrata.","authors":"Yan Yuan, Yuhong Zhou, Yanfeng Zhou, Rui Ye, Jingrun Lu, Yizhe Wang, Fang Wei, Fukuan He, Honglan Yu, Yu Wang","doi":"10.1007/s10096-025-05373-5","DOIUrl":"https://doi.org/10.1007/s10096-025-05373-5","url":null,"abstract":"<p><strong>Background: </strong>(Candida glabrata C. glabrata) is classified as a high-priority pathogen by the World Health Organization (WHO). It causes mucosal and deep infections in immunocompromised individuals, yet its diagnosis currently relies on slow culture processes. This highlights the urgent need for rapid and accurate detection methods.</p><p><strong>Methods: </strong>Ten primers targeting different regions of the C. glabrata ITS2 gene were designed to create a multiple cross displacement amplification (MCDA) assay coupled with a nanoparticle lateral flow biosensor (LFB). Following optimisation of temperature and time, the multiple cross displacement amplification coupled with lateral flow biosensor (MCDA-LFB) system was employed to detect C. glabrata DNA in clinical specimens.</p><p><strong>Results: </strong>Under optimal conditions (63 °C, 40 min), the C. glabrata-MCDA-LFB assay achieved a limit of detection (LoD) of 10 fg/µL.The assay successfully detected all C. glabrata strains tested and demonstrated no cross-reactivity with non-C. glabrata isolates. Findings showed that the C. glabrata-MCDA-LFB assay promptly and successfully detected all 57 C. glabrata-positive samples among 240 clinical specimens identified by traditional culture methods. The entire process, including sample processing (20 min), the MCDA reaction (40 min) and result documentation (2 min), was completed within 62 min.</p><p><strong>Conclusion: </strong>The C. glabrata-MCDA-LFB assay developed in this study is a rapid, simplified, sensitive and specific technique that is straightforward to use. It can be used to screen for or diagnose C. glabrata infections in clinical settings, particularly in regions with limited resources.</p>","PeriodicalId":11782,"journal":{"name":"European Journal of Clinical Microbiology & Infectious Diseases","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2025-12-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145803041","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-20DOI: 10.1007/s10096-025-05384-2
Pierre-Marie Roger, Agnès Ferre, Bruno Abram, Guillaume Normand, Lauranne Tondut, Yves Tanneau, Nicholas Beaujon, Ali Valizadeh, Victor Turcan, Josselin Malaterre, Franck Lay, Anne-Claire Strzelecki, Soraya Boumezber, Delphine Girard, Pierre-Henri Savoie, Olivier Alenda, Assi Assi
Our aim was to determine risk factors of enterococcal bacteraemia (EB) in urology. In a prospective study including all positive blood cultures (PBC) in urology for 18 months in five institutions, one hundred seventy-six PBC diagnosed, including 111 cases related to Gram negative bacilli (63%), 32 EB (18%) and 33 cases related to other pathogens (19%). The main characteristic of EB was their occurrence exclusively in male gender. In logistic regression, EB appeared to be associated with transurethral resection of the prostate: adjusted odds ratio (AOR) [95% CI]: 3.75 [1.30-10.78].
{"title":"Risk factors for enterococcal bacteraemia in urology: a multicentre cohort study.","authors":"Pierre-Marie Roger, Agnès Ferre, Bruno Abram, Guillaume Normand, Lauranne Tondut, Yves Tanneau, Nicholas Beaujon, Ali Valizadeh, Victor Turcan, Josselin Malaterre, Franck Lay, Anne-Claire Strzelecki, Soraya Boumezber, Delphine Girard, Pierre-Henri Savoie, Olivier Alenda, Assi Assi","doi":"10.1007/s10096-025-05384-2","DOIUrl":"https://doi.org/10.1007/s10096-025-05384-2","url":null,"abstract":"<p><p>Our aim was to determine risk factors of enterococcal bacteraemia (EB) in urology. In a prospective study including all positive blood cultures (PBC) in urology for 18 months in five institutions, one hundred seventy-six PBC diagnosed, including 111 cases related to Gram negative bacilli (63%), 32 EB (18%) and 33 cases related to other pathogens (19%). The main characteristic of EB was their occurrence exclusively in male gender. In logistic regression, EB appeared to be associated with transurethral resection of the prostate: adjusted odds ratio (AOR) [95% CI]: 3.75 [1.30-10.78].</p>","PeriodicalId":11782,"journal":{"name":"European Journal of Clinical Microbiology & Infectious Diseases","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2025-12-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145793489","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-19DOI: 10.1007/s10096-025-05385-1
Gabriele Giuliano, Arianna Lippi, Margherita Sambo, Laerta Dulislami, Marta Zanchi, David Bennett, Antonella Fossi, Alberto Michielon, Daniele Marianello, Antonella Puddu, Chiara Catelli, Piero Paladini, Luca Luzzi, Maria Grazia Cusi, Massimiliano Fabbiani, Federico Franchi, Mario Tumbarello, Francesca Montagnani
Background: Post-lung transplantation pneumonia (pLuTP) is among the most frequent complications following lung transplantation, predominantly caused by Gram-negative bacteria (GNB). The emergence of multidrug-resistant (MDR) non-fermenting GNB as aetiological agents of pLuTP represents a major therapeutic challenge due to limited treatment options.
Methods: We present a retrospective case series describing 20 episodes of pLuTP successfully treated with cefiderocol.
Results: Thirteen patients, with a median age of 56 years (IQR 44-59), experienced a total of 20 episodes of pLuTP. In 3 cases (25.0%), polymicrobial pneumonia was diagnosed. Acinetobacter baumannii was isolated in 13/20 episodes (65.0%), followed by Pseudomonas aeruginosa (6/20, 30.0%), Achromobacter xylosoxidans and Klebsiella pneumoniae (2/20, 10.0% each). Cefiderocol was administered in all episodes: as monotherapy in 5/20 cases (25.0%), in combination with high-dose ampicillin/sulbactam in 7/20 cases (35.0%), aminoglycosides or intravenous colistin (2/20, 10.0% each), and other regimens in the remaining 4/20 cases (20.0%). Clinical cure was achieved in 17/20 cases (85.0%). Microbiological eradication was not achieved in any case. Relapse occurred in 4/20 episodes (20.0%), with no evidence of in vitro cefiderocol resistance. No major adverse events were reported.
Conclusions: Cefiderocol may represent a valuable therapeutic option for managing pLuTP caused by difficult-to-treat GNB in lung transplant recipients.
{"title":"Treatment of post-lung transplantation pneumonia with cefiderocol: a case series and insights from the literature.","authors":"Gabriele Giuliano, Arianna Lippi, Margherita Sambo, Laerta Dulislami, Marta Zanchi, David Bennett, Antonella Fossi, Alberto Michielon, Daniele Marianello, Antonella Puddu, Chiara Catelli, Piero Paladini, Luca Luzzi, Maria Grazia Cusi, Massimiliano Fabbiani, Federico Franchi, Mario Tumbarello, Francesca Montagnani","doi":"10.1007/s10096-025-05385-1","DOIUrl":"https://doi.org/10.1007/s10096-025-05385-1","url":null,"abstract":"<p><strong>Background: </strong>Post-lung transplantation pneumonia (pLuTP) is among the most frequent complications following lung transplantation, predominantly caused by Gram-negative bacteria (GNB). The emergence of multidrug-resistant (MDR) non-fermenting GNB as aetiological agents of pLuTP represents a major therapeutic challenge due to limited treatment options.</p><p><strong>Methods: </strong>We present a retrospective case series describing 20 episodes of pLuTP successfully treated with cefiderocol.</p><p><strong>Results: </strong>Thirteen patients, with a median age of 56 years (IQR 44-59), experienced a total of 20 episodes of pLuTP. In 3 cases (25.0%), polymicrobial pneumonia was diagnosed. Acinetobacter baumannii was isolated in 13/20 episodes (65.0%), followed by Pseudomonas aeruginosa (6/20, 30.0%), Achromobacter xylosoxidans and Klebsiella pneumoniae (2/20, 10.0% each). Cefiderocol was administered in all episodes: as monotherapy in 5/20 cases (25.0%), in combination with high-dose ampicillin/sulbactam in 7/20 cases (35.0%), aminoglycosides or intravenous colistin (2/20, 10.0% each), and other regimens in the remaining 4/20 cases (20.0%). Clinical cure was achieved in 17/20 cases (85.0%). Microbiological eradication was not achieved in any case. Relapse occurred in 4/20 episodes (20.0%), with no evidence of in vitro cefiderocol resistance. No major adverse events were reported.</p><p><strong>Conclusions: </strong>Cefiderocol may represent a valuable therapeutic option for managing pLuTP caused by difficult-to-treat GNB in lung transplant recipients.</p>","PeriodicalId":11782,"journal":{"name":"European Journal of Clinical Microbiology & Infectious Diseases","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2025-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145793406","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-16DOI: 10.1007/s10096-025-05304-4
Salvatore Rotundo, Francesca Serapide, Giacomo Guido, Francesco Di Gennaro, Alessandro Russo
{"title":"Is the unavailability of rifapentine holding back the end TB strategy in Europe? Implication for tuberculosis control among migrants and refugees.","authors":"Salvatore Rotundo, Francesca Serapide, Giacomo Guido, Francesco Di Gennaro, Alessandro Russo","doi":"10.1007/s10096-025-05304-4","DOIUrl":"https://doi.org/10.1007/s10096-025-05304-4","url":null,"abstract":"","PeriodicalId":11782,"journal":{"name":"European Journal of Clinical Microbiology & Infectious Diseases","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2025-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145762252","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-12DOI: 10.1007/s10096-025-05378-0
Sevgi Aslan Tuncay, Gulsen Akkoc, Zeynep Ergenc, Seyhan Yılmaz, Burcu Parlak, Aylin Dizi Isik, Pinar Canizci Erdemli, Didem Buyuktas Aytac, Meryem Cagla Abaci Capar, Rabia Emel Senay, Burcu Tufan Tas, Nursah Eker, Ahmet Koc, Eda Kepenekli, Sevliya Ocal Demir
Saprochaete species are emerging fungal pathogens, particularly affecting immunocompromised individuals, with clinical manifestations ranging from superficial to invasive infections. We present three cases of pediatric Saprochaete spp. infections, detailing clinical presentation, diagnostic workup, and treatment strategies. Two patients with acute myeloid leukemia developed bloodstream infections with Saprochaete clavata; both required prolonged antifungal therapy due to deep organ involvement, and one experienced relapse after treatment discontinuation. The third case involved a patient with cystic fibrosis, in whom Saprochaete capitata was isolated from sputum; she improved with antifungal therapy and had no relapse. Saprochaete spp. infections in pediatric populations present diagnostic and therapeutic challenges. Further research is needed to optimize management strategies and improve patient outcomes.
{"title":"Pediatric saprochaete infections: insights from case reports.","authors":"Sevgi Aslan Tuncay, Gulsen Akkoc, Zeynep Ergenc, Seyhan Yılmaz, Burcu Parlak, Aylin Dizi Isik, Pinar Canizci Erdemli, Didem Buyuktas Aytac, Meryem Cagla Abaci Capar, Rabia Emel Senay, Burcu Tufan Tas, Nursah Eker, Ahmet Koc, Eda Kepenekli, Sevliya Ocal Demir","doi":"10.1007/s10096-025-05378-0","DOIUrl":"https://doi.org/10.1007/s10096-025-05378-0","url":null,"abstract":"<p><p>Saprochaete species are emerging fungal pathogens, particularly affecting immunocompromised individuals, with clinical manifestations ranging from superficial to invasive infections. We present three cases of pediatric Saprochaete spp. infections, detailing clinical presentation, diagnostic workup, and treatment strategies. Two patients with acute myeloid leukemia developed bloodstream infections with Saprochaete clavata; both required prolonged antifungal therapy due to deep organ involvement, and one experienced relapse after treatment discontinuation. The third case involved a patient with cystic fibrosis, in whom Saprochaete capitata was isolated from sputum; she improved with antifungal therapy and had no relapse. Saprochaete spp. infections in pediatric populations present diagnostic and therapeutic challenges. Further research is needed to optimize management strategies and improve patient outcomes.</p>","PeriodicalId":11782,"journal":{"name":"European Journal of Clinical Microbiology & Infectious Diseases","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2025-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145741518","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-12DOI: 10.1007/s10096-025-05372-6
Verena Zerbato, Dan Alexandru Toc, Stefano Di Bella, Cristina Lagatolla
Purpose: Current treatment options for infections caused by vancomycin-resistant (VR) Enterococcus faecium remain limited and often suboptimal. This study investigates the in vitro activity of combination therapies involving fosfomycin and oxazolidinones (linezolid, contezolid, delpazolid, and sutezolid) against five vanA and five vanB E. faecium isolates obtained from blood cultures.
Methods: The synergistic activity of fosfomycin combined with each oxazolidinone was assessed using checkerboard and time-kill assays.
Results: Synergistic interactions were demonstrated with all fosfomycin-oxazolidinone combinations, although the effect was more consistent with delpazolid. In some cases (one for contezolid, three for linezolid, four for sutezolid), the interaction was additive rather than synergistic. Synergy was mainly driven by a significant reduction in fosfomycin minimum inhibitory concentration (MIC), up to 16-fold, while decreases in oxazolidinone MIC were modest. Time-kill assays performed on representative isolates Ef-3 (vanB) and Ef-10 (vanA) confirmed the synergistic interactions, showing a reduction in viable cell counts after 24 h.
Conclusion: Our findings provide preclinical evidence supporting the use of fosfomycin in combination with novel oxazolidinones as a promising therapeutic strategy against VR E. faecium infections.
目的:目前对万古霉素耐药(VR)粪肠球菌感染的治疗方案仍然有限,而且往往不理想。本研究探讨了磷霉素和恶唑烷酮类药物(利奈唑胺、康替唑胺、德尔帕唑胺和苏替唑胺)联合治疗对从血培养中获得的5株vanA和5株vanB E. faecium的体外活性。方法:采用棋盘法和时效法评价磷霉素与各恶唑烷酮的协同作用。结果:所有磷霉素-恶唑烷酮联合用药均表现出协同作用,但效果与德尔帕唑啉更一致。在某些情况下(康替唑胺1例,利奈唑胺3例,舒替唑胺4例),相互作用是相加的而不是协同的。协同作用主要是由磷霉素最低抑制浓度(MIC)的显著降低(高达16倍)驱动的,而恶唑烷酮MIC的降低幅度不大。对代表性分离株Ef-3 (vanB)和Ef-10 (vanA)进行的时间杀伤试验证实了协同相互作用,显示24 h后活细胞计数减少。结论:我们的研究结果提供了临床前证据,支持使用磷霉素与新型恶唑烷酮类药物联合治疗VR粪肠杆菌感染是一种有希望的治疗策略。
{"title":"Synergistic activity of fosfomycin combined with old and new oxazolidinones (linezolid, contezolid, delpazolid, and sutezolid) against bloodstream isolates of vancomycin-resistant Enterococcus faecium.","authors":"Verena Zerbato, Dan Alexandru Toc, Stefano Di Bella, Cristina Lagatolla","doi":"10.1007/s10096-025-05372-6","DOIUrl":"https://doi.org/10.1007/s10096-025-05372-6","url":null,"abstract":"<p><strong>Purpose: </strong>Current treatment options for infections caused by vancomycin-resistant (VR) Enterococcus faecium remain limited and often suboptimal. This study investigates the in vitro activity of combination therapies involving fosfomycin and oxazolidinones (linezolid, contezolid, delpazolid, and sutezolid) against five vanA and five vanB E. faecium isolates obtained from blood cultures.</p><p><strong>Methods: </strong>The synergistic activity of fosfomycin combined with each oxazolidinone was assessed using checkerboard and time-kill assays.</p><p><strong>Results: </strong>Synergistic interactions were demonstrated with all fosfomycin-oxazolidinone combinations, although the effect was more consistent with delpazolid. In some cases (one for contezolid, three for linezolid, four for sutezolid), the interaction was additive rather than synergistic. Synergy was mainly driven by a significant reduction in fosfomycin minimum inhibitory concentration (MIC), up to 16-fold, while decreases in oxazolidinone MIC were modest. Time-kill assays performed on representative isolates Ef-3 (vanB) and Ef-10 (vanA) confirmed the synergistic interactions, showing a reduction in viable cell counts after 24 h.</p><p><strong>Conclusion: </strong>Our findings provide preclinical evidence supporting the use of fosfomycin in combination with novel oxazolidinones as a promising therapeutic strategy against VR E. faecium infections.</p>","PeriodicalId":11782,"journal":{"name":"European Journal of Clinical Microbiology & Infectious Diseases","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2025-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145741515","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-10DOI: 10.1007/s10096-025-05376-2
Lorenzo Pelagatti, Francesca Mangani, Elisa Muz, Lorenzo Corbetta, Sara Tomassetti, Alberto Farese, Alessandro Bartoloni, Francesca Caldi, Mattia Ronchetti, Tommaso Giani, Peiman Nazerian, Gian Maria Rossolini, Simone Vanni
Background: Pneumonia remains a major cause of morbidity and mortality worldwide. Rapid diagnostic testing with molecular syndromic panels (MSP) has proved useful for the management of antimicrobial treatment of hospital-acquired pneumonia (HAP). In this study, we evaluated the impact of early use of MSP testing in the Emergency Department (ED) for the management of antibiotic therapy in patients with moderate to severe CAP with risk factors for multi-drug-resistant pathogens (CAP-MDR).
Patients and methods: Patients presenting at the ED with diagnosis of moderate to severe CAP-MDR underwent microbiological analysis of lower respiratory tract specimens by culture and MSP testing (bioMérieux, FilmArray® Pneumonia Plus Panel). The primary outcome was the percentage of cases in which MSP testing modified the empiric antimicrobial therapy started according to local protocols. Among the secondary outcomes we included the time elapsed from ED admission to antibiotic change or confirmation upon receipt of the MSP results.
Results: Between June 2024 and May 2025, 93 patients were enrolled (age, 72.9 ± 13.9 years; 62.4% males). MSP testing identified one or more pathogens in 91.4% of cases. Modification of empiric antibiotic therapy, started according to local protocols, occurred in 65.6% of patients (escalation in 44.1% and de-escalation in 21.5% of cases) after 11.4 ± 6.3 h (IQR 12.0) since ED presentation.
Conclusions: The early use of MSP on lower respiratory samples collected in the ED from patients with diagnosis of moderate to severe CAP-MDR could allow a rapid and targeted modification of the empiric antibiotic therapy in these patients, with potential advantages on antimicrobial stewardship and patient management.
背景:肺炎仍然是世界范围内发病和死亡的主要原因。事实证明,使用分子综合征面板(MSP)进行快速诊断测试对医院获得性肺炎(HAP)的抗菌治疗管理是有用的。在这项研究中,我们评估了在急诊科(ED)早期使用MSP检测对具有多重耐药病原体(CAP- mdr)危险因素的中重度CAP患者抗生素治疗管理的影响。患者和方法:在急诊科就诊并诊断为中度至重度CAP-MDR的患者通过培养和MSP检测(biomrieux, FilmArray®Pneumonia Plus Panel)对下呼吸道标本进行微生物学分析。主要结果是MSP检测修改根据当地方案开始的经验性抗菌治疗的病例百分比。在次要结局中,我们包括从急诊室入院到抗生素更换或收到MSP结果后确认的时间。结果:2024年6月至2025年5月,共纳入93例患者(年龄72.9±13.9岁,男性62.4%)。在91.4%的病例中,MSP检测发现了一种或多种病原体。在ED出现11.4±6.3小时(IQR为12.0)后,65.6%的患者根据当地方案开始修改经验性抗生素治疗(44.1%的病例升级,21.5%的病例降级)。结论:早期对诊断为中重度CAP-MDR的急诊科患者采集的下呼吸道样本使用MSP,可以快速、有针对性地修改这些患者的经验性抗生素治疗,在抗菌药物管理和患者管理方面具有潜在优势。
{"title":"Rapid testing with molecular syndromic panels of patients presenting at the emergency department with pneumonia at risk for multidrug-resistant pathogens.","authors":"Lorenzo Pelagatti, Francesca Mangani, Elisa Muz, Lorenzo Corbetta, Sara Tomassetti, Alberto Farese, Alessandro Bartoloni, Francesca Caldi, Mattia Ronchetti, Tommaso Giani, Peiman Nazerian, Gian Maria Rossolini, Simone Vanni","doi":"10.1007/s10096-025-05376-2","DOIUrl":"https://doi.org/10.1007/s10096-025-05376-2","url":null,"abstract":"<p><strong>Background: </strong>Pneumonia remains a major cause of morbidity and mortality worldwide. Rapid diagnostic testing with molecular syndromic panels (MSP) has proved useful for the management of antimicrobial treatment of hospital-acquired pneumonia (HAP). In this study, we evaluated the impact of early use of MSP testing in the Emergency Department (ED) for the management of antibiotic therapy in patients with moderate to severe CAP with risk factors for multi-drug-resistant pathogens (CAP-MDR).</p><p><strong>Patients and methods: </strong>Patients presenting at the ED with diagnosis of moderate to severe CAP-MDR underwent microbiological analysis of lower respiratory tract specimens by culture and MSP testing (bioMérieux, FilmArray<sup>®</sup> Pneumonia Plus Panel). The primary outcome was the percentage of cases in which MSP testing modified the empiric antimicrobial therapy started according to local protocols. Among the secondary outcomes we included the time elapsed from ED admission to antibiotic change or confirmation upon receipt of the MSP results.</p><p><strong>Results: </strong>Between June 2024 and May 2025, 93 patients were enrolled (age, 72.9 ± 13.9 years; 62.4% males). MSP testing identified one or more pathogens in 91.4% of cases. Modification of empiric antibiotic therapy, started according to local protocols, occurred in 65.6% of patients (escalation in 44.1% and de-escalation in 21.5% of cases) after 11.4 ± 6.3 h (IQR 12.0) since ED presentation.</p><p><strong>Conclusions: </strong>The early use of MSP on lower respiratory samples collected in the ED from patients with diagnosis of moderate to severe CAP-MDR could allow a rapid and targeted modification of the empiric antibiotic therapy in these patients, with potential advantages on antimicrobial stewardship and patient management.</p>","PeriodicalId":11782,"journal":{"name":"European Journal of Clinical Microbiology & Infectious Diseases","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2025-12-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145713857","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-05DOI: 10.1007/s10096-025-05370-8
Jérémy Guenezan, Luc Deroche, Nicolas Marjanovic, Mélyne Piton, Bertrand Drugeon, Benjamin Bigaud, Martin Billaud, Nicolas Leveque, Olivier Mimoz
Objectives: Community-acquired pneumonia (CAP) due to Mycoplasma pneumoniae is a frequent and challenging diagnosis in Emergency Departments (EDs), often leading to unnecessarily broad-spectrum or ineffective antibiotic therapy. We hypothesize that rapid diagnostic tools, such as point-of-care (POC) devices, could improve initial antibiotic therapy appropriateness and reduce unnecessary additional diagnostic tests.
Methods: We conducted a retrospective, single-centre, study involving 81 patients visiting our ED with Mycoplasma pneumoniae CAP diagnosed between January 2023 and June 2024. Patients were divided into two groups depending on whether their nasopharyngeal swab, taken to detect viruses or selected bacteria such as Mycoplasma pneumoniae, was handled at the ED with a POC device (POC group) or at the main laboratory (Lab group). Primary outcome was the appropriateness of initial antibiotic therapy, defined as the use of macrolide (or tetracycline or fluoroquinolone in allergic patients) alone or, in case of severe disease, in combination with third-generation cephalosporin.
Results: Initial antibiotic therapy was more frequently appropriated in patients of the POC group than in patients of the Lab group (28 of 43 [65%] vs. 6 of 38 [16%], adjusted OR: 9.9, 95% confidence interval: 3.4 to 29.1; p < .001). Point-of-care testing was associated with fewer additional biological and radiological tests performed in the ED.
Conclusion: POC improved the management of Mycoplasma pneumoniae CAP by increasing the appropriateness of initial antimicrobial therapy and reducing unnecessary additional diagnostic procedures. Larger multicentre studies are needed to confirm these findings, assess the impact on overall healthcare costs, and investigate the integration of POC devices into routine clinical workflows.
{"title":"Impact of point-of-care multiplex PCR for Mycoplasma pneumoniae community-acquired pneumonia in the emergency department.","authors":"Jérémy Guenezan, Luc Deroche, Nicolas Marjanovic, Mélyne Piton, Bertrand Drugeon, Benjamin Bigaud, Martin Billaud, Nicolas Leveque, Olivier Mimoz","doi":"10.1007/s10096-025-05370-8","DOIUrl":"https://doi.org/10.1007/s10096-025-05370-8","url":null,"abstract":"<p><strong>Objectives: </strong>Community-acquired pneumonia (CAP) due to Mycoplasma pneumoniae is a frequent and challenging diagnosis in Emergency Departments (EDs), often leading to unnecessarily broad-spectrum or ineffective antibiotic therapy. We hypothesize that rapid diagnostic tools, such as point-of-care (POC) devices, could improve initial antibiotic therapy appropriateness and reduce unnecessary additional diagnostic tests.</p><p><strong>Methods: </strong>We conducted a retrospective, single-centre, study involving 81 patients visiting our ED with Mycoplasma pneumoniae CAP diagnosed between January 2023 and June 2024. Patients were divided into two groups depending on whether their nasopharyngeal swab, taken to detect viruses or selected bacteria such as Mycoplasma pneumoniae, was handled at the ED with a POC device (POC group) or at the main laboratory (Lab group). Primary outcome was the appropriateness of initial antibiotic therapy, defined as the use of macrolide (or tetracycline or fluoroquinolone in allergic patients) alone or, in case of severe disease, in combination with third-generation cephalosporin.</p><p><strong>Results: </strong>Initial antibiotic therapy was more frequently appropriated in patients of the POC group than in patients of the Lab group (28 of 43 [65%] vs. 6 of 38 [16%], adjusted OR: 9.9, 95% confidence interval: 3.4 to 29.1; p < .001). Point-of-care testing was associated with fewer additional biological and radiological tests performed in the ED.</p><p><strong>Conclusion: </strong>POC improved the management of Mycoplasma pneumoniae CAP by increasing the appropriateness of initial antimicrobial therapy and reducing unnecessary additional diagnostic procedures. Larger multicentre studies are needed to confirm these findings, assess the impact on overall healthcare costs, and investigate the integration of POC devices into routine clinical workflows.</p>","PeriodicalId":11782,"journal":{"name":"European Journal of Clinical Microbiology & Infectious Diseases","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2025-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145676739","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-05DOI: 10.1007/s10096-025-05371-7
Antonio Vitiello, Mariarosaria Boccellino, Andrea Zovi
{"title":"Probiotics and postbiotics to counter antimicrobial resistant infections, an editorial.","authors":"Antonio Vitiello, Mariarosaria Boccellino, Andrea Zovi","doi":"10.1007/s10096-025-05371-7","DOIUrl":"https://doi.org/10.1007/s10096-025-05371-7","url":null,"abstract":"","PeriodicalId":11782,"journal":{"name":"European Journal of Clinical Microbiology & Infectious Diseases","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2025-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145676699","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-03DOI: 10.1007/s10096-025-05375-3
Laura Fernández-Garcia, Lucia Blasco, Inés Bleriot, Lucía Arman, Clara Ibarguren-Quiles, Antonio Barrio-Pujante, Manuel González de Aledo, Rodolfo García-Contreras, Rafael Cantón, Thomas K Wood, María Tomas
Purpose: This review aims to provide an overview of current knowledge on the involvement of QS in phage infection. The role of QS in bacterial defence against phages is emphasized, without overlooking the fact that QS can sometimes also promote phage infection. We also review the implications of QS in phage therapy and current perspectives.
Methods: For the bibliographic review, PubMed and Google Scholar were used to search for publications on "quorum-sensing" and "phage infection".
Results: The relationships between bacteria and phages are extremely complicated and involve several mechanisms. Quorum sensing (QS) is a communication system involved in controlling bacterial fitness, both at population and individual levels. Phages (viruses that infect bacteria) play a major role in the natural regulation of bacterial populations. In order to protect themselves, bacteria have developed several defence mechanisms involving different levels of protection, such as prevention of phage entry and phage assembly, degradation of phage nucleic acids, and entrance in a dormant state (persistence). QS has recently been shown to affect some of these phage defence mechanisms. In this review, the main influence of QS in phage infection is discussed. Finally, some innovative treatment approaches, including using engineered phages harbouring T7aiiA QQ enzyme and QS inhibitors such as SsoPox-W2631 and penicillinic acid, are also considered. However, it is important to note that the use of QS-interfering molecules may also reduce the efficacy of phage therapy.
Conclusion: QS is an important mechanism that affects several bacterial metabolisms, particularly in phage defence. Despite the complex interaction between QS and phages, modifying QS has been found to enhance phage therapy.
{"title":"Phages and quorum sensing: findings to consider in phage therapy.","authors":"Laura Fernández-Garcia, Lucia Blasco, Inés Bleriot, Lucía Arman, Clara Ibarguren-Quiles, Antonio Barrio-Pujante, Manuel González de Aledo, Rodolfo García-Contreras, Rafael Cantón, Thomas K Wood, María Tomas","doi":"10.1007/s10096-025-05375-3","DOIUrl":"https://doi.org/10.1007/s10096-025-05375-3","url":null,"abstract":"<p><strong>Purpose: </strong>This review aims to provide an overview of current knowledge on the involvement of QS in phage infection. The role of QS in bacterial defence against phages is emphasized, without overlooking the fact that QS can sometimes also promote phage infection. We also review the implications of QS in phage therapy and current perspectives.</p><p><strong>Methods: </strong>For the bibliographic review, PubMed and Google Scholar were used to search for publications on \"quorum-sensing\" and \"phage infection\".</p><p><strong>Results: </strong>The relationships between bacteria and phages are extremely complicated and involve several mechanisms. Quorum sensing (QS) is a communication system involved in controlling bacterial fitness, both at population and individual levels. Phages (viruses that infect bacteria) play a major role in the natural regulation of bacterial populations. In order to protect themselves, bacteria have developed several defence mechanisms involving different levels of protection, such as prevention of phage entry and phage assembly, degradation of phage nucleic acids, and entrance in a dormant state (persistence). QS has recently been shown to affect some of these phage defence mechanisms. In this review, the main influence of QS in phage infection is discussed. Finally, some innovative treatment approaches, including using engineered phages harbouring T7aiiA QQ enzyme and QS inhibitors such as SsoPox-W2631 and penicillinic acid, are also considered. However, it is important to note that the use of QS-interfering molecules may also reduce the efficacy of phage therapy.</p><p><strong>Conclusion: </strong>QS is an important mechanism that affects several bacterial metabolisms, particularly in phage defence. Despite the complex interaction between QS and phages, modifying QS has been found to enhance phage therapy.</p>","PeriodicalId":11782,"journal":{"name":"European Journal of Clinical Microbiology & Infectious Diseases","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2025-12-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145667769","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}