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Molecular pathways and therapeutic strategies in dermatofibrosarcoma protuberans (DFSP): unravelling the tumor's genetic landscape. 原发性皮纤维肉瘤(DFSP)的分子途径和治疗策略:揭开肿瘤的基因图谱。
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2024-05-14 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7164
Harpreet Singh, Heena Bholaram Choudhary, Deepa Satish Mandlik, Manoj Subhash Magre, Sourav Mohanto, Mohammed Gulzar Ahmed, Bhuvnesh Kumar Singh, Arun Kumar Mishra, Arvind Kumar, Amrita Mishra, T Venkatachalam, Hitesh Chopra

Dermatofibrosarcoma Protuberans (DFSP) is a rare soft tissue sarcoma distinguished by its infiltrative growth pattern and recurrence potential. Understanding the molecular characteristics of DFSP is essential for enhancing its diagnosis, prognosis, and treatment strategies. The paper provides an overview of DFSP, highlighting the significance of its molecular understanding. The gene expression profiling has uncovered unique molecular signatures in DFSP, highlighting its heterogeneity and potential therapeutic targets. The Platelet-Derived Growth Factor Receptors (PDGFRs) and Fibroblast Growth Factor Receptors (FGFRs) signaling pathways play essential roles in the progression and development of DFSP. The abnormal activation of these pathways presents opportunities for therapeutic interventions. Several emerging therapies, i.e., immunotherapies, immunomodulatory strategies, and immune checkpoint inhibitors, offer promising alternatives to surgical resection. In DFSP management, combination strategies, including rational combination therapies, aim to exploit the synergistic effects and overcome resistance. The article consisting future perspectives and challenges includes the discovery of prognostic and predictive biomarkers to improve risk stratification and treatment selection. Preclinical models, such as Patient-derived xenografts (PDX) and genetically engineered mouse models, help study the biology of DFSP and evaluate therapeutic interventions. The manuscript also covers small-molecule inhibitors, clinical trials, immune checkpoint inhibitors for DFSP treatment, combination therapies, rational therapies, and resistance mechanisms, which are unique and not broadly covered in recent pieces of literature. See also the graphical abstract(Fig. 1).

皮纤维肉瘤(DFSP)是一种罕见的软组织肉瘤,以其浸润性生长方式和复发可能性而闻名。了解 DFSP 的分子特征对提高其诊断、预后和治疗策略至关重要。本文概述了 DFSP,强调了了解其分子特征的重要意义。基因表达谱分析揭示了 DFSP 独特的分子特征,突出了其异质性和潜在的治疗靶点。血小板衍生生长因子受体(PDGFRs)和成纤维细胞生长因子受体(FGFRs)信号通路在 DFSP 的进展和发展中起着至关重要的作用。这些通路的异常激活为治疗干预提供了机会。一些新兴疗法,即免疫疗法、免疫调节策略和免疫检查点抑制剂,为手术切除提供了有希望的替代方案。在 DFSP 的治疗中,联合策略(包括合理的联合疗法)旨在发挥协同作用并克服耐药性。这篇文章由未来展望和挑战组成,其中包括发现预后和预测生物标志物,以改善风险分层和治疗选择。患者衍生异种移植(PDX)和基因工程小鼠模型等临床前模型有助于研究 DFSP 的生物学特性并评估治疗干预措施。手稿还涉及用于 DFSP 治疗的小分子抑制剂、临床试验、免疫检查点抑制剂、联合疗法、合理疗法和耐药机制,这些都是近期文献中没有广泛涉及的独特内容。另请参阅图文摘要(图 1)。
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引用次数: 0
Combined non-invasive neuromodulation using transcranial direct current stimulation, motor imagery and action observation for motor, cognitive and functional recovery in cortico-basal degeneration: a single case study. 利用经颅直流电刺激、运动想象和动作观察进行非侵入性神经调节,促进皮质基底层变性患者的运动、认知和功能恢复:单个病例研究。
IF 4.6 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-05-06 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7027
Juan Pablo Romero, Alexis Martínez-Benito, David de Noreña, Alfonso Hurtado-Martínez, Francisco José Sánchez-Cuesta, Yeray González-Zamorano, Marcos Moreno-Verdú

This case report presents a comprehensive assessment and therapeutic intervention using non-invasive motor cortex neuromodulation for a 70-year-old female patient diagnosed with corticobasal degeneration (CBD). The study followed the CARE guidelines. The patient meets the criteria for probable CBD, with neuroimaging evidence of exclusively cortical impairment. The patient underwent a non-invasive neuromodulation protocol involving transcranial direct current stimulation (tDCS) and action observation plus motor imagery (AO+MI). The neuromodulation protocol comprised 20 sessions involving tDCS over the primary motor cortex and combined AO+MI. Anodal tDCS was delivered a 2 mA excitatory current for 20 minutes. AO+MI focused on lower limb movements, progressing over four weeks with video observation and gradual execution, both weekly and monthly. The neuromodulation techniques were delivered online (i.e. applied simultaneously in each session). Outcome measures were obtained at baseline, post-intervention and follow-up (1 month later), and included motor (lower limb), cognitive/neuropsychological and functional assessments. Walking speed improvements were not observed, but balance (Berg Balance Scale) and functional strength (Five Times Sit-to-Stand Test) improved post-treatment. Long-term enhancements in attentional set-shifting, inhibitory control, verbal attentional span, and working memory were found. There was neurophysiological evidence of diminished intracortical inhibition. Functional changes included worsening in Cortico Basal Ganglia Functional Scale score. Emotional well-being and general health (SF-36) increased immediately after treatment but were not sustained, while Falls Efficacy Scale International showed only long-term improvement. The findings suggest potential benefits of the presented neuromodulation protocol for CBD patients, highlighting multifaceted outcomes in motor, cognitive, and functional domains.

本病例报告介绍了对一名被诊断为皮质基底层变性(CBD)的 70 岁女性患者使用非侵入性运动皮层神经调控进行综合评估和治疗干预的情况。研究遵循了 CARE 指南。患者符合可能患有皮质基底层变性的标准,神经影像学证据显示其皮质完全受损。患者接受了非侵入性神经调节方案,包括经颅直流电刺激(tDCS)和动作观察加运动想象(AO+MI)。神经调控方案包括 20 个疗程,涉及初级运动皮层的 tDCS 和 AO+MI 组合。阳极 tDCS 释放 2 mA 的兴奋电流,持续 20 分钟。AO+MI侧重于下肢运动,在四周内通过视频观察和逐步执行,每周和每月进行一次。神经调控技术是在线进行的(即每次治疗同时进行)。结果测量在基线、干预后和随访(1 个月后)时进行,包括运动(下肢)、认知/神经心理学和功能评估。治疗后,步行速度未见改善,但平衡能力(伯格平衡量表)和功能强度(五次坐立测试)有所提高。在注意集转移、抑制控制、言语注意广度和工作记忆方面,发现了长期的改善。有神经生理学证据表明皮层内抑制减弱。功能变化包括 Cortico 基底神经节功能量表评分恶化。情绪幸福感和一般健康状况(SF-36)在治疗后立即得到改善,但并不持久,而国际跌倒功效量表(Falls Efficacy Scale International)仅显示出长期改善。研究结果表明,所提出的神经调控方案可为CBD患者带来潜在的益处,并在运动、认知和功能领域取得了多方面的成果。
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引用次数: 0
Recent advances, challenges and updates on the development of therapeutics for malaria. 疟疾治疗药物开发的最新进展、挑战和更新。
IF 4.6 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-05-06 eCollection Date: 2024-01-01 DOI: 10.17179/excli2023-6856
Rimmy Nandal, Davinder Kumar, Navidha Aggarwal, Virender Kumar, Balasubramanian Narasimhan, Rakesh Kumar Marwaha, Prabodh Chander Sharma, Surender Kumar, Nitin Bansal, Hitesh Chopra, Aakash Deep

Malaria has developed as a serious worldwide health issue as a result of the introduction of resistant Plasmodium species strains. Because of the common chemo resistance to most of the existing drugs on the market, it poses a severe health problem and significant obstacles in drug research. Malaria treatment has evolved during the last two decades in response to Plasmodium falciparum drug sensitivity and a return of the disease in tropical areas. Plasmodium falciparum is now highly resistant to the majority of antimalarial drugs. The parasite resistance drew focus to developing novel antimalarials to combat parasite resistance. The requirement for many novel antimalarial drugs in the future year necessitates adopting various drug development methodologies. Different innovative strategies for discovering antimalarial drugs are now being examined here. This review is primarily concerned with the description of newly synthesized antimalarial compounds, i.e. Tafenoquine, Cipargamin, Ferroquine, Artefenomel, DSM265, MMV390048 designed to improve the activity of pure antimalarial enantiomers. In this review, we selected the representative malarial drugs in clinical trials, classified them with detailed targets according to their action, discussed the relationship within the human trials, and generated a summative discussion with prospective expectations.

由于抗药性疟原虫菌株的出现,疟疾已成为一个严重的世界性健康问题。由于疟原虫对市场上现有的大多数药物普遍具有抗药性,因此疟疾已成为一个严重的健康问题,并给药物研究带来了巨大障碍。在过去的二十年里,疟疾治疗不断发展,以应对恶性疟原虫对药物的敏感性和热带地区疟疾的复发。目前,恶性疟原虫对大多数抗疟药物具有高度抗药性。寄生虫的抗药性促使人们关注开发新型抗疟药物,以消除寄生虫的抗药性。由于未来一年需要许多新型抗疟药物,因此有必要采用各种药物开发方法。本文将对发现抗疟药物的不同创新策略进行研究。本综述主要介绍新合成的抗疟化合物,即他非诺喹、西帕加明、铁喹、Artefenomel、DSM265、MMV390048,旨在提高纯抗疟对映体的活性。在这篇综述中,我们选择了临床试验中具有代表性的抗疟药物,根据其作用的详细靶点对它们进行了分类,讨论了它们在人体试验中的关系,并进行了具有前瞻性期望的总结性讨论。
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引用次数: 0
Production of microbial transglutaminase by Streptoverticillium cinnamoneum KKP 1658. 肉桂链霉菌(Streptoverticillium cinnamoneum KKP 1658)产生微生物转谷氨酰胺酶。
IF 4.6 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-05-03 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7033
Vitaliy Kolotylo, Kamil Piwowarek, Marek Kieliszek

Transglutaminase finds broad applications in the food industry, influencing texture, shelf life and overall food quality. It can be utilized to create products with enhanced sensory and technological properties and serves as a tool to reduce food waste. The aim of this study was to optimize the production of microbial transglutaminase (MTG) by the genetically unmodified strain of Streptoverticillium cinnamoneum KKP 1658. Tryptone soy broth (TSB) was chosen as the optimal inoculation medium due to its high MTG activity in the cultivation substrate. The optimal inoculum incubation time was determined as 24 hours, with a dosage of 10 %. Various nitrogen sources were investigated while maintaining a consistent nitrogen dosage (0.2 %) (including aminobak, corn steep liquor, ammonium nitrate and ammonium sulphate) to achieve the highest microbiological transglutaminase activity. The combination of aminobak with corn steep liquor and a cultivation period of 72 hours (28 °C; pH 6.0-6.5) yielded the highest MTG activity at 6.59 U/mL.

转谷氨酰胺酶在食品工业中应用广泛,可影响食品的质地、保质期和整体质量。它可用于生产感官和技术性能更佳的产品,并可作为减少食品浪费的一种工具。本研究的目的是优化未经基因修饰的肉桂链霉菌株 KKP 1658 微生物转谷氨酰胺酶(MTG)的生产。由于胰蛋白胨大豆肉汤(TSB)在培养基中具有较高的 MTG 活性,因此被选为最佳接种培养基。最佳接种物培养时间为 24 小时,接种量为 10%。在保持稳定的氮用量(0.2%)(包括氨基巴克、玉米浸出液、硝酸铵和硫酸铵)的情况下,研究了各种氮源,以获得最高的微生物转谷氨酰胺酶活性。将氨基巴克与玉米浸出液结合使用,培养期为 72 小时(28 °C;pH 值 6.0-6.5),可获得最高的 MTG 活性(6.59 U/mL)。
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引用次数: 0
Exosomes derived from colorectal cancer cells take part in activation of stromal fibroblasts through regulating PHLPP isoforms. 来自结直肠癌细胞的外泌体通过调节 PHLPP 同工酶参与基质成纤维细胞的激活。
IF 4.6 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-05-02 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-6926
Fatemeh Khaloozadeh, Ehsan Razmara, Fatemeh Asgharpour-Babayian, Alireza Fallah, Reihaneh Ramezani, Fatemeh Rouhollah, Sadegh Babashah

Given that tumor cells primarily instigate systemic changes through exosome secretion, our study delved into the role of colorectal cancer (CRC)-secreted exosomal miR-224 in stromal reprogramming and its impact on endothelial cell angiogenesis. Furthermore, we assessed the potential clinical significance of a specific signature of circulating serum-derived miRNAs, serving as a non-invasive biomarker for CRC diagnosis. Circulating serum-derived miR-103a-3p, miR-135b-5p, miR-182-5p, and miR-224-5p were significantly up-regulated, while miR-215-5p, and miR-455-5p showed a significant down-regulation in CRC patients than in healthy individuals. Our findings indicated that the expressions of CAF-specific markers (α-SMA and FAP) and CAF-derived cytokines (IL-6, and SDF-1) were induced in fibroblasts stimulated with SW480 CRC exosomes, partly due to Akt activation. As a plausible mechanism, exosomal transfer of miR-224 from SW40 CRC cells may activate stromal fibroblasts, which in turn, may promote endothelial cell sprouting. The study identified PHLPP1 and PHLPP2 as direct targets of miR-224 and demonstrated that CRC-secreted exosomal miR-224 activates Akt signaling by regulating PHLPP1/2 in activated fibroblasts, thereby affecting the stromal cell proliferation and migration. This study established a panel of six-circulating serum-derived miRNAs as a non-invasive biomarker for CRC diagnosis. Also, we proposed a supporting model in which CRC-secreted exosomal miR-224 takes part in the stromal reprogramming to CAFs partly through regulating Akt signaling. This may affect the malignant biological behavior of activated stromal cells and thereby elicit a vascular response within the microenvironment of CRC cells. See also the graphical abstract(Fig. 1).

鉴于肿瘤细胞主要通过分泌外泌体引发全身性变化,我们的研究深入探讨了结直肠癌(CRC)分泌的外泌体 miR-224 在基质重编程中的作用及其对内皮细胞血管生成的影响。此外,我们还评估了循环血清来源的miRNAs特异性特征的潜在临床意义,该特征可作为诊断结直肠癌的非侵入性生物标志物。与健康人相比,CRC 患者循环血清来源的 miR-103a-3p、miR-135b-5p、miR-182-5p 和 miR-224-5p 明显上调,而 miR-215-5p 和 miR-455-5p 则明显下调。我们的研究结果表明,CAF特异性标记物(α-SMA和FAP)和CAF衍生细胞因子(IL-6和SDF-1)的表达在受到SW480 CRC外泌体刺激的成纤维细胞中被诱导,部分原因是Akt被激活。作为一种可能的机制,SW40 CRC 细胞外泌体转移的 miR-224 可能会激活基质成纤维细胞,进而促进内皮细胞萌发。研究发现 PHLPP1 和 PHLPP2 是 miR-224 的直接靶标,并证明 CRC 分泌的外泌体 miR-224 通过调节活化成纤维细胞中的 PHLPP1/2 激活 Akt 信号,从而影响基质细胞的增殖和迁移。这项研究建立了一个由六种循环血清来源的 miRNA 组成的小组,作为诊断 CRC 的非侵入性生物标志物。此外,我们还提出了一个支持性模型,即 CRC 分泌的外泌体 miR-224 部分通过调节 Akt 信号转导参与基质重编程为 CAFs。这可能会影响激活的基质细胞的恶性生物学行为,从而引起 CRC 细胞微环境中的血管反应。另见图表摘要(图 1)。
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引用次数: 0
Digital blindness: the hidden cost of excessive screen time. 数字盲症:屏幕时间过长的隐性代价。
IF 4.6 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-04-30 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7041
Nikhil Aggarwal, Noor Us Saba
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引用次数: 0
The influence of gut microbiota on the progression of Type 2 Diabetes: a new perspective for treatment and prevention. 肠道微生物群对 2 型糖尿病进展的影响:治疗和预防的新视角。
IF 4.6 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-04-30 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7036
Lysandro P Borges, Pamela C de Jesus, Jessiane B de Souza, Deise M R R Silva, Pedro H M Moura, Ronaldy S Santos, Marina Dos S Barreto, Adriana G Guimarães, Lucas A da M Santana, Otavio Cabral-Marques, Eloia E D Silva
{"title":"The influence of gut microbiota on the progression of Type 2 Diabetes: a new perspective for treatment and prevention.","authors":"Lysandro P Borges, Pamela C de Jesus, Jessiane B de Souza, Deise M R R Silva, Pedro H M Moura, Ronaldy S Santos, Marina Dos S Barreto, Adriana G Guimarães, Lucas A da M Santana, Otavio Cabral-Marques, Eloia E D Silva","doi":"10.17179/excli2024-7036","DOIUrl":"10.17179/excli2024-7036","url":null,"abstract":"","PeriodicalId":12247,"journal":{"name":"EXCLI Journal","volume":null,"pages":null},"PeriodicalIF":4.6,"publicationDate":"2024-04-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11180935/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141418511","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The offspring sex ratio at birth in one of the largest human harems. 人类最大后宫之一的后代出生性别比。
IF 4.6 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-04-29 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7020
Mostafa Saadat
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引用次数: 0
Paraffin embedding of the whole human cerebral hemisphere to assess arterial distribution territories. 对整个人类大脑半球进行石蜡包埋,以评估动脉分布区域。
IF 4.6 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-04-29 eCollection Date: 2024-01-01 DOI: 10.17179/excli2023-6601
Mykyta Smirnov, Frédéric Andersson, Laurent Barantin, Igor Lima Maldonado, Christophe Destrieux

Commonly used to decode the human brain's structural complexity, ex vivo dissection focuses on a given structure or region but cannot depict the whole brain organization (for example, its arterial distribution territories). Where dissection reaches its limit, the combination of tissue sectioning and 3D reconstruction may provide a volume for the assessment of structures from any view angle, following them dynamically to understand their spatial relationships. However, to produce sections, standard histological tissue processing protocols for paraffin embedding cannot be applied to a cerebral hemisphere as the latter is extensively larger than the conventional specimens. This paper presents a protocol for paraffin embedding of the whole human cerebral hemisphere and a method to reconstruct 3D volumes from serially sectioned and photographed paraffin blocks containing embedded hemispheres. Seven ex vivo whole human cerebral hemispheres were included, two were serially sectioned. Main cerebral arteries were injected with colored media to label arterial territories. A detailed description of every step, from tissue processing to image acquisition of cut blockfaces and volume reconstruction, is provided. Tissue processing and section cutting were reproducible, and the former provided complete and homogeneous paraffin wax impregnation. 3D visualization of the reconstructed whole human cerebral hemisphere successfully showed the distribution territories of the main cerebral arteries. In addition, we discuss the challenges we faced and overcame while developing the presented method and highlight its originality.

体外解剖常用于解码人脑结构的复杂性,它侧重于特定的结构或区域,但无法描绘整个大脑组织(例如其动脉分布区域)。当解剖达到极限时,组织切片和三维重建的结合可以提供一个从任何视角评估结构的容积,动态地跟踪它们以了解它们的空间关系。然而,要制作切片,石蜡包埋的标准组织学组织处理程序无法应用于大脑半球,因为后者比传统标本大得多。本文介绍了一种对整个人类大脑半球进行石蜡包埋的方案,以及一种从包含包埋半球的连续切片和拍照石蜡块重建三维体积的方法。本文包括七个活体外完整人类大脑半球,其中两个被连续切片。主要的大脑动脉被注入彩色介质以标记动脉区域。从组织处理到切块面图像采集和体积重建,每个步骤都有详细描述。组织处理和切片切割都是可重复的,前者提供了完整和均匀的石蜡浸渍。重建的整个人类大脑半球的三维可视化成功显示了主要脑动脉的分布区域。此外,我们还讨论了在开发该方法时所面临和克服的挑战,并强调了该方法的独创性。
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引用次数: 0
Ferroptosis and circular RNAs: new horizons in cancer therapy. 铁突变和环状 RNA:癌症治疗的新视野。
IF 4.6 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-04-25 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7005
Asif Ahmad Bhat, Neelima Kukreti, Muhammad Afzal, Ahsas Goyal, Riya Thapa, Haider Ali, Moyad Shahwan, Waleed Hassan Almalki, Imran Kazmi, Sami I Alzarea, Sachin Kumar Singh, Kamal Dua, Gaurav Gupta

Cancer poses intricate challenges to treatment due to its complexity and diversity. Ferroptosis and circular RNAs (circRNAs) are emerging as innovative therapeutic avenues amid the evolving landscape of cancer therapy. Extensive investigations into circRNAs reveal their diverse roles, ranging from molecular regulators to pivotal influencers of ferroptosis in cancer cell lines. The results underscore the significance of circRNAs in modulating molecular pathways that impact crucial aspects of cancer development, including cell survival, proliferation, and metastasis. A detailed analysis delineates these pathways, shedding light on the molecular mechanisms through which circRNAs influence ferroptosis. Building upon recent experimental findings, the study evaluates the therapeutic potential of targeting circRNAs to induce ferroptosis. By identifying specific circRNAs associated with the etiology of cancer, this analysis paves the way for the development of targeted therapeutics that exploit vulnerabilities in cancer cells. This review consolidates the existing understanding of ferroptosis and circRNAs, emphasizing their role in cancer therapy and providing impetus for ongoing research in this dynamic field. See also the graphical abstract(Fig. 1).

癌症因其复杂性和多样性给治疗带来了复杂的挑战。在不断发展的癌症治疗领域,铁突变和环状 RNA(circRNA)正成为创新的治疗途径。对循环 RNA 的广泛研究揭示了它们的不同作用,从分子调控因子到癌细胞系中铁突变的关键影响因子。研究结果强调了 circRNA 在调节分子通路中的重要作用,这些通路影响着癌症发展的关键环节,包括细胞存活、增殖和转移。详细的分析勾勒出了这些通路,揭示了 circRNA 影响铁突变的分子机制。在近期实验发现的基础上,该研究评估了靶向 circRNAs 诱导铁变态反应的治疗潜力。通过确定与癌症病因相关的特定 circRNA,这项分析为开发利用癌细胞弱点的靶向疗法铺平了道路。这篇综述巩固了人们对铁凋亡和 circRNAs 的现有认识,强调了它们在癌症治疗中的作用,并为这一动态领域的持续研究提供了动力。另见图表摘要(图 1)。
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引用次数: 0
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