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Cancer therapy by cyclin-dependent kinase inhibitors (CDKIs): bench to bedside. 细胞周期蛋白依赖性激酶抑制剂(CDKIs)的癌症治疗:从实验室到临床。
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2024-06-04 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7076
Ali Hassanzadeh, Navid Shomali, Amin Kamrani, Mohammad Sadegh Soltani-Zangbar, Hadi Nasiri, Morteza Akbari

A major characteristic of cancer is dysregulated cell division, which results in aberrant growth of cells. Consequently, medicinal targets that prevent cell division would be useful in the fight against cancer. The primary regulator of proliferation is a complex consisting of cyclin and cyclin-dependent kinases (CDKs). The FDA has granted approval for CDK inhibitors (CDKIs) to treat metastatic hormone receptor-positive breast cancer. Specifically, CDK4/6 CDKIs block the enzyme activity of CDK4 and CDK6. Unfortunately, the majority of first-generation CDK inhibitors, also known as pan-CDK inhibitors because they target multiple CDKs, have not been authorized for clinical use owing to their serious side effects and lack of selection. In contrast to this, significant advancements have been created to permit the use of pan-CDK inhibitors in therapeutic settings. Notably, the toxicity and negative consequences of pan-CDK inhibitors have been lessened in recent years thanks to the emergence of combination therapy tactics. Therefore, pan-CDK inhibitors have renewed promise for clinical use when used in a combination regimen. The members of the CDK family have been reviewed and their primary roles in cell cycle regulation were covered in this review. Next, we provided an overview of the state of studies on CDK inhibitors.

癌症的一个主要特征是细胞分裂失调,导致细胞异常生长。因此,能够阻止细胞分裂的药物靶点将有助于抗击癌症。细胞增殖的主要调节因子是由细胞周期蛋白和细胞周期蛋白依赖性激酶(CDKs)组成的复合物。美国食品和药物管理局已批准 CDK 抑制剂(CDKIs)用于治疗转移性激素受体阳性乳腺癌。具体来说,CDK4/6 CDKIs 可阻断 CDK4 和 CDK6 的酶活性。遗憾的是,大多数第一代 CDK 抑制剂(又称泛 CDK 抑制剂,因为它们针对多个 CDK)由于副作用严重和缺乏选择性而未被授权用于临床。与此相反,目前已经取得了重大进展,允许在治疗中使用泛 CDK 抑制剂。值得注意的是,近年来由于联合治疗策略的出现,泛 CDK 抑制剂的毒性和负面影响已有所减轻。因此,在联合治疗方案中使用泛 CDK 抑制剂时,临床应用前景一片光明。本综述回顾了 CDK 家族的成员及其在细胞周期调控中的主要作用。接下来,我们概述了 CDK 抑制剂的研究现状。
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引用次数: 0
Forkhead Box O (FOXO) signaling in NSCLC: pathways to targeted therapies. NSCLC 中的叉头框 O (FOXO) 信号转导:靶向疗法的途径。
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2024-05-31 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7272
Lakshmi Thangavelu, Terezinha de Jesus Andreoli Pinto, Sachchidanand Pathak, Abhishek Tiwari, Varsha Tiwari, Gaurav Gupta, Kumud Pant, Saurabh Gupta, Moyad Shahwan
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引用次数: 0
The most dreadful mushroom toxins: a review of their toxicological mechanisms, chemical structural characteristics, and treatment. 最可怕的蘑菇毒素:毒理机制、化学结构特征和治疗方法综述。
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2024-05-28 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7257
Irene Gouvinhas, Jani Silva, Maria José Alves, Juliana Garcia

Mushroom consumption is a worldwide custom that continues to grow in popularity. On the other hand, foraging for wild mushrooms can lead to serious disease and even death if deadly mushrooms are accidentally consumed. Mushroom poisoning is difficult to diagnose and treat since the symptoms are similar to those of other disorders. In terms of chemistry, mushroom poisoning is associated with extraordinarily strong toxins, meaning that isolating and identifying toxins has substantial scientific relevance, especially in understanding the lethal components of toxic mushrooms. Most of these toxins exhibit exceptional physiological features that might help enhance chemistry, biochemistry, physiology, and pharmacology research. Despite the discovery of more than 100 poisons, several dangerous mushrooms remain unexplored. This review covers the chemistry (including chemical structures, complete synthesis, and biosynthesis), as well as the toxicology, namely the toxicokinetics, mechanisms of toxicology, and clinical toxicology of these poisons, in addition to the discussion of the development of their most effective diagnostic and therapeutic strategies with the hopes of spurring additional studies, focusing on individual classes of toxins found in poisonous mushrooms such as amatoxins, gyromitrin, orellanine, and phallatoxins. See also the graphical abstract(Fig. 1).

食用蘑菇是一种世界性的风俗习惯,而且越来越受欢迎。另一方面,如果误食致命的蘑菇,觅食野生蘑菇可能会导致严重的疾病,甚至死亡。蘑菇中毒很难诊断和治疗,因为症状与其他疾病相似。在化学方面,蘑菇中毒与超强毒素有关,这意味着分离和鉴定毒素具有重要的科学意义,尤其是在了解毒蘑菇的致命成分方面。这些毒素大多表现出特殊的生理特征,可能有助于促进化学、生物化学、生理学和药理学研究。尽管已经发现了 100 多种毒蘑菇,但仍有几种危险蘑菇尚未被研究。这篇综述涵盖了这些毒物的化学(包括化学结构、全合成和生物合成)和毒理学,即毒物动力学、毒理学机制和临床毒理学,此外还讨论了这些毒物最有效的诊断和治疗策略的发展,希望能促进更多的研究,重点是在毒蘑菇中发现的单类毒素,如金针菇毒素、陀螺毒素、奥利宁毒素和法拉毒素。另请参阅图表摘要(图 1)。
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引用次数: 0
Computer-guided design of novel nitrogen-based heterocyclic sphingosine-1-phosphate (S1P) activators as osteoanabolic agents. 计算机辅助设计新型氮基杂环鞘氨醇-1-磷酸(S1P)激活剂作为骨合成代谢剂。
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2024-05-27 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7214
Rattanawan Tangporncharoen, Chuleeporn Phanus-Umporn, Supaluk Prachayasittikul, Chanin Nantasenamat, Veda Prachayasittikul, Aungkura Supokawej

Osteoanabolic agents, or drugs that promote bone formation, have gained considerable attention for osteoporosis management due to their curative and preventive potentials. Sphingosine-1-phosphate receptor 2 (S1PR2) is an attractive drug target, in which its activation leads to osteogenesis-promoting effect. Nitrogen-containing heterocyclic scaffolds (i.e., quinoxaline and indole) are promising pharmacophores possessing diverse bioactivities and were reported as S1PR2 activators. Quantitative structure-activity relationship (QSAR) modeling is a computational approach well-known as a fundamental tool for facilitating successful drug development. This study demonstrates the discovery of new S1PR2 activators using computational-driven rational design. Herein, an original dataset of nitrogen-containing S1PR2 activators was collected from ChEMBL database. The retrieved dataset was separated into two datasets according to their core scaffolds (i.e., quinoxaline and indole). QSAR modeling was performed using multiple linear regression (MLR) algorithm to successfully obtain two models with good predictive performance. The constructed models also revealed key properties playing essential roles for potent S1PR2 activation, such as Van der Waals volume (R2v+ and E3v), mass (MATS5m and Km), electronegativity (H3e), and number of 5-membered rings (nR05). Subsequently, the constructed models were further employed to guide rational design and predict S1PR2 activating effects of an additional set of 752 structurally modified compounds. Most of the modified compounds were predicted to have higher potency than their parents, and a set of promising potent newly designed compounds was highlighted. Additionally, drug-likeness prediction was performed to reveal that most of the newly designed compounds are druggable compounds with possibility for further development.

骨合成代谢药物或促进骨形成的药物因其治疗和预防潜力而在骨质疏松症的治疗中受到广泛关注。磷脂酰肌苷-1-磷酸受体 2(S1PR2)是一个极具吸引力的药物靶点,它的激活可产生促进骨生成的作用。据报道,含氮杂环支架(即喹喔啉和吲哚)是具有多种生物活性的有前途的药层,可作为 S1PR2 激活剂。定量结构-活性关系(QSAR)建模是一种众所周知的计算方法,是促进药物成功开发的基本工具。本研究展示了利用计算驱动的合理设计发现新的 S1PR2 激活剂的过程。本研究从 ChEMBL 数据库中收集了含氮 S1PR2 激活剂的原始数据集。检索到的数据集根据其核心支架(即喹喔啉和吲哚)分为两个数据集。利用多元线性回归(MLR)算法进行 QSAR 建模,成功地获得了两个具有良好预测性能的模型。所构建的模型还揭示了对强效激活 S1PR2 起重要作用的关键特性,如范德华体积(R2v+ 和 E3v)、质量(MATS5m 和 Km)、电负性(H3e)和五元环数(nR05)。随后,所构建的模型被进一步用于指导合理设计和预测另外一组 752 种结构修饰化合物的 S1PR2 激活效应。据预测,大多数修饰化合物的药效高于它们的母体,并突出了一组有前途的强效新设计化合物。此外,还进行了药物相似性预测,发现大多数新设计的化合物都是可药用化合物,有进一步开发的可能性。
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引用次数: 0
Notice of retraction: Auraptene-induced cytotoxicity mechanisms in human malignant glioblastoma (U87) cells: role of reactive oxygen species (ROS). 撤回通知:金合欢素诱导人恶性胶质母细胞瘤(U87)细胞的细胞毒性机制:活性氧(ROS)的作用。
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2024-05-23 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7418
Amir R Afshari, Mohammad Jalili-Nik, Mohammad Soukhtanloo, Ahmad Ghorbani, Hamid R Sadeghnia, Hamid Mollazadeh, Mostafa Karimi Roshan, Farzad Rahmani, Hamed Sabri, Mohammad Mahdi Vahedi, Seyed Hadi Mousavi

[This retracts the article DOI: 10.17179/excli2019-1136.].

[本文撤回文章 DOI:10.17179/excli2019-1136]。
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引用次数: 0
Current biological and pharmacological updates on Tinospora cordifolia. 当前有关铁杉的生物学和药理学最新进展。
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2024-05-21 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7170
Shubham Kumar, Murtaza M Tambuwala, Yachana Mishra, Vijay Mishra
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引用次数: 0
Exhaled volatile organic compounds in the detection of colorectal cancer: a systematic review and meta-analysis. 检测结直肠癌的呼出挥发性有机化合物:系统回顾和荟萃分析。
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2024-05-17 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7042
Daniah Alsaadi, Nicolle Clements, Natiya Gabuniya, Nader Francis, Manish Chand

There is an apparent need for novel non-invasive colorectal cancer (CRC) screening tests that are more acceptable to patients and can reliably detect CRC or reduce the number of unnecessary colonoscopies performed in cancer-free patients. An emerging number of studies demonstrate the potential value of exhaled volatile organic compounds (VOCs) as a diagnostic and triaging test for CRC. A systematic appraisal and meta-analysis of the published evidence was done to determine whether exhaled VOCs can be used in the detection and screening of CRC. Nine electronic databases were searched from inception of the databases until August 2020. Quantitative and descriptive data of CRC patients and healthy control (HC) participants who underwent VOCs breath analysis was extracted. In addition, where possible, sampling methods, analytical platforms, processors, and specific breath biomarkers found in each study were recorded. Fourteen articles were included in the systematic review with 491 colorectal patients and 754 HC participants (n=1245). Sub-group meta-analysis was conducted on nine of those articles and the pooled sensitivity was estimated to be 0.89 (95 % CI = 0.80-0.99) whereas specificity was 0.83 (95 % CI = 0.74-0.92). Heterogeneity of pooled sensitivity and specificity was estimated as I2=11.11 %. Although this study was limited by small sample size and different analytical platforms, the proposed future framework resolves such limitations and standardizes future research. It is reasonable to deduce that VOCs breath analysis is certainly a field of research that can progress to replace traditional methods within the framework of CRC screening and diagnosis.

目前显然需要一种新型的非侵入性结直肠癌(CRC)筛查检测方法,这种方法更容易被患者接受,并能可靠地检测出 CRC 或减少对无癌症患者进行不必要的结肠镜检查的次数。越来越多的研究表明,呼出的挥发性有机化合物(VOCs)具有作为 CRC 诊断和分流测试的潜在价值。我们对已发表的证据进行了系统评估和荟萃分析,以确定呼出的挥发性有机化合物是否可用于检测和筛查 CRC。从数据库建立之初到 2020 年 8 月,共检索了九个电子数据库。提取了接受 VOCs 呼气分析的 CRC 患者和健康对照(HC)参与者的定量和描述性数据。此外,在可能的情况下,还记录了每项研究中发现的采样方法、分析平台、处理器和特定呼气生物标记物。系统综述共纳入 14 篇文章,涉及 491 名结直肠癌患者和 754 名 HC 参与者(n=1245)。对其中九篇文章进行了分组荟萃分析,汇总灵敏度估计为 0.89(95 % CI = 0.80-0.99),特异性为 0.83(95 % CI = 0.74-0.92)。汇总灵敏度和特异性的异质性估计为 I2=11.11 %。虽然这项研究受到样本量小和分析平台不同的限制,但提出的未来框架解决了这些限制,并使未来的研究标准化。我们可以合理地推断,挥发性有机化合物呼气分析肯定是一个研究领域,可以在 CRC 筛查和诊断框架内取代传统方法。
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引用次数: 0
Recent insights into luteolin and its biological and pharmacological activities. 关于木犀草素及其生物和药理活性的最新研究成果。
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2024-05-16 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7168
Priscilla Nadalin, Jae Kwang Kim, Sang Un Park
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引用次数: 0
A regulatory compliant short-term oral toxicity study of soluble [60]fullerenes in rats. 符合法规要求的可溶性 [60] 富勒烯大鼠短期口服毒性研究。
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2024-05-15 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7084
Christopher Burres, Robert Wong, Fabio Pedreira, Maria Da Silva Pimenta, Fathi Moussa

Thirty-eight years after its discovery, the safety of [60]fullerene (C60), the most abundant fullerene with many potential applications, particularly in oxidative stress-related medicine, remains controversial. This is mainly due to the alleged dangers of C60 nanomaterial, which are regularly supported by some publications. While several academic studies have confirmed the safety of C60 in various experimental models, it is well known that C60 aggregates can carry toxic elements. Meanwhile, countless websites offer C60-oily solutions to consumers, without any regulatory consideration. Therefore, an officially certified toxicity study is urgently needed to avoid any public health problems. In this context, we report on the first certified short-term oral toxicity study of soluble C60, designed according to the guidelines of the Organization for Economic Cooperation and Development, with a deviation in the duration (2 weeks instead of 4 weeks) accepted by the U.S. Food and Drug Administration. The results of this study, conducted in an independent accredited European Laboratory, clearly show that C60 in soluble form (0.8 mg/ml of extra virgin olive oil), administered at the highest possible dose of 3.8 mg/kg body weight/day, did not cause any adverse effects in rats after 14 days of daily oral administration. This report should settle the debate on the acute oral toxicity of C60 and pave the way for further preclinical studies. The study is accompanied by a comprehensive report that includes documentation of the raw data.

[60]富勒烯(C60)是最丰富的富勒烯,具有许多潜在用途,尤其是在与氧化应激相关的医学领域,但在发现 38 年后,其安全性仍然存在争议。这主要是由于一些出版物经常支持 C60 纳米材料的所谓危险性。虽然多项学术研究证实了 C60 在各种实验模型中的安全性,但众所周知,C60 聚集体可能携带有毒元素。与此同时,无数网站向消费者提供 C60 油溶液,却没有任何监管考虑。因此,为了避免出现任何公共健康问题,我们迫切需要进行官方认证的毒性研究。在此背景下,我们报告了第一项经认证的可溶性 C60 短期口服毒性研究,该研究是根据经济合作与发展组织的指导方针设计的,但在持续时间(2 周而非 4 周)上与美国食品和药物管理局所认可的有所偏差。这项研究是在一家独立的欧洲认证实验室进行的,研究结果清楚地表明,以可溶性形式(0.8 毫克/毫升特级初榨橄榄油)给大鼠服用最高剂量(3.8 毫克/千克体重/天)的 C60,在每天口服 14 天后,不会对大鼠造成任何不良影响。这份报告应能解决有关 C60 急性口服毒性的争论,并为进一步的临床前研究铺平道路。该研究附有一份综合报告,其中包括原始数据的记录。
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引用次数: 0
Integrating fNIRS and machine learning: shedding light on Parkinson's disease detection. 将 fNIRS 与机器学习相结合:揭示帕金森病的检测方法。
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2024-05-14 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7151
Edgar Guevara, Gabriel Solana-Lavalle, Roberto Rosas-Romero

The purpose of this research is to introduce an approach to assist the diagnosis of Parkinson's disease (PD) by classifying functional near-infrared spectroscopy (fNIRS) studies as PD positive or negative. fNIRS is a non-invasive optical signal modality that conveys the brain's hemodynamic response, specifically changes in blood oxygenation in the cerebral cortex; and its potential as a tool to assist PD detection deserves to be explored since it is non-invasive and cost-effective as opposed to other neuroimaging modalities. Besides the integration of fNIRS and machine learning, a contribution of this work is that various approaches were implemented and tested to find the implementation that achieves the highest performance. All the implementations used a logistic regression model for classification. A set of 792 temporal and spectral features were extracted from each participant's fNIRS study. In the two best performing implementations, an ensemble of feature-ranking techniques was used to select a reduced feature subset, which was subsequently reduced with a genetic algorithm. Achieving optimal detection performance, our approach reached 100 % accuracy, precision, and recall, with an F1 score and area under the curve (AUC) of 1, using 14 features. This significantly advances PD diagnosis, highlighting the potential of integrating fNIRS and machine learning for non-invasive PD detection.

fNIRS 是一种非侵入性的光学信号模式,可传递大脑的血流动力学反应,特别是大脑皮层的血氧变化;与其他神经成像模式相比,fNIRS 具有非侵入性和成本效益高的特点,因此其作为辅助帕金森病(PD)检测工具的潜力值得探索。除了将 fNIRS 与机器学习相结合外,这项工作的一个贡献是实施并测试了各种方法,以找到性能最高的实施方法。所有实施方法都使用逻辑回归模型进行分类。从每位参与者的 fNIRS 研究中提取了一组 792 个时间和光谱特征。在两个性能最好的实施方案中,使用了一组特征排序技术来选择一个缩小的特征子集,然后使用遗传算法对其进行缩小。我们的方法达到了最佳检测性能,使用 14 个特征,准确率、精确度和召回率均为 100%,F1 分数和曲线下面积(AUC)均为 1。这大大推进了帕金森病的诊断,凸显了将 fNIRS 与机器学习相结合用于无创帕金森病检测的潜力。
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引用次数: 0
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