首页 > 最新文献

EXCLI Journal最新文献

英文 中文
Association between leukocytes telomere length and parental consanguineous marriage.
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2025-01-17 eCollection Date: 2025-01-01 DOI: 10.17179/excli2024-7920
Fatemeh Zahra Darvishi, Mostafa Saadat
{"title":"Association between leukocytes telomere length and parental consanguineous marriage.","authors":"Fatemeh Zahra Darvishi, Mostafa Saadat","doi":"10.17179/excli2024-7920","DOIUrl":"10.17179/excli2024-7920","url":null,"abstract":"","PeriodicalId":12247,"journal":{"name":"EXCLI Journal","volume":"24 ","pages":"177-178"},"PeriodicalIF":3.8,"publicationDate":"2025-01-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11830915/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143447657","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The effects of challenge and threat states on performance outcomes: An updated review and meta-analysis of recent findings.
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2025-01-16 eCollection Date: 2025-01-01 DOI: 10.17179/excli2024-7995
Adrian Hase, Maximilian Nietschke, Maciej Kloskowski, Kacper Szymanski, Lee Moore, Jeremy P Jamieson, Maciej Behnke

The biopsychosocial model (BPSM) of challenge and threat provides a framework for understanding stress responses in motivated performance situations, including how stress relates to performance. In this model, experiences of challenge - characterized by evaluations of personal coping resources matching or exceeding situational demands - elicit approach-oriented patterns of physiological responding and tend to facilitate performance, whereas threat - characterized by demands exceeding resources - elicit avoidance-oriented patterns of physiological responding and tend to impair performance. Extant systematic reviews and meta-analyses support the idea that challenge facilitates performance relative to threat (Behnke and Kaczmarek, 2018[8]; Hase et al., 2019[50]). The present systematic review and meta-analysis builds on this evidence base by examining whether conclusions replicate in recent research (post-2017), which is important given seismic cultural shifts tied to a worldwide pandemic, civil unrest, and skyrocketing mental health problems tied to stress. The analysis included 62 studies published between 2017 and 2024 (total N = 7,418 participants). The meta-analytic findings indicate that individuals in a challenge state achieve better performance outcomes than those in a threat state across multiple domains (e.g., education, sport). While effect sizes were small, the risk of bias was generally low. These results reaffirm the utility of the BPSM and emphasize the importance of stress responses in influencing performance outcomes. These data also have the potential to inform future research on this topic by shedding light on expectable effect sizes and highlighting potential influences of publication bias and replicability issues.

{"title":"The effects of challenge and threat states on performance outcomes: An updated review and meta-analysis of recent findings.","authors":"Adrian Hase, Maximilian Nietschke, Maciej Kloskowski, Kacper Szymanski, Lee Moore, Jeremy P Jamieson, Maciej Behnke","doi":"10.17179/excli2024-7995","DOIUrl":"https://doi.org/10.17179/excli2024-7995","url":null,"abstract":"<p><p>The biopsychosocial model (BPSM) of challenge and threat provides a framework for understanding stress responses in motivated performance situations, including how stress relates to performance. In this model, experiences of challenge - characterized by evaluations of personal coping resources matching or exceeding situational demands - elicit approach-oriented patterns of physiological responding and tend to facilitate performance, whereas threat - characterized by demands exceeding resources - elicit avoidance-oriented patterns of physiological responding and tend to impair performance. Extant systematic reviews and meta-analyses support the idea that challenge facilitates performance relative to threat (Behnke and Kaczmarek, 2018[8]; Hase et al., 2019[50]). The present systematic review and meta-analysis builds on this evidence base by examining whether conclusions replicate in recent research (post-2017), which is important given seismic cultural shifts tied to a worldwide pandemic, civil unrest, and skyrocketing mental health problems tied to stress. The analysis included 62 studies published between 2017 and 2024 (total <i>N</i> = 7,418 participants). The meta-analytic findings indicate that individuals in a challenge state achieve better performance outcomes than those in a threat state across multiple domains (e.g., education, sport). While effect sizes were small, the risk of bias was generally low. These results reaffirm the utility of the BPSM and emphasize the importance of stress responses in influencing performance outcomes. These data also have the potential to inform future research on this topic by shedding light on expectable effect sizes and highlighting potential influences of publication bias and replicability issues.</p>","PeriodicalId":12247,"journal":{"name":"EXCLI Journal","volume":"24 ","pages":"151-176"},"PeriodicalIF":3.8,"publicationDate":"2025-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11869992/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143540761","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The role of N(6)-methyladenosine (m6a) modification in cancer: recent advances and future directions.
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2025-01-15 eCollection Date: 2025-01-01 DOI: 10.17179/excli2024-7935
Xiaozhou Xie, Zhen Fang, Haoyu Zhang, Zheng Wang, Jie Li, Yuchen Jia, Liang Shang, Feng Cao, Fei Li

N(6)-methyladenosine (m6A) modification is the most abundant and prevalent internal modification in eukaryotic mRNAs. The role of m6A modification in cancer has become a hot research topic in recent years and has been widely explored. m6A modifications have been shown to regulate cancer occurrence and progression by modulating different target molecules. This paper reviews the recent research progress of m6A modifications in cancer and provides an outlook on future research directions, especially the development of molecularly targeted drugs. See also the graphical abstract(Fig. 1).

{"title":"The role of N(6)-methyladenosine (m6a) modification in cancer: recent advances and future directions.","authors":"Xiaozhou Xie, Zhen Fang, Haoyu Zhang, Zheng Wang, Jie Li, Yuchen Jia, Liang Shang, Feng Cao, Fei Li","doi":"10.17179/excli2024-7935","DOIUrl":"10.17179/excli2024-7935","url":null,"abstract":"<p><p>N(6)-methyladenosine (m6A) modification is the most abundant and prevalent internal modification in eukaryotic mRNAs. The role of m6A modification in cancer has become a hot research topic in recent years and has been widely explored. m6A modifications have been shown to regulate cancer occurrence and progression by modulating different target molecules. This paper reviews the recent research progress of m6A modifications in cancer and provides an outlook on future research directions, especially the development of molecularly targeted drugs. See also the graphical abstract(Fig. 1).</p>","PeriodicalId":12247,"journal":{"name":"EXCLI Journal","volume":"24 ","pages":"113-150"},"PeriodicalIF":3.8,"publicationDate":"2025-01-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11830918/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143448226","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Competing endogenous RNA networks in ovarian cancer: from bench to bedside.
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2025-01-07 eCollection Date: 2025-01-01 DOI: 10.17179/excli2024-7827
Roghaiyeh Derogar, Fatemeh Nejadi Orang, Mahdi Abdoli Shadbad

Epithelial ovarian cancer is responsible for the majority of ovarian malignancies, and its highly invasive nature and chemoresistant development have been major obstacles to treating patients with mainstream treatments. In recent decades, the significance of microRNAs (miRNAs), circular RNAs (circRNAs), long non-coding RNAs (lncRNAs), and competing endogenous RNAs (ceRNAs) has been highlighted in ovarian cancer development. This hidden language between these RNAs has led to the discovery of enormous regulatory networks in ovarian cancer cells that substantially affect gene expression. Aside from providing ample opportunities for targeted therapies, circRNA- and lncRNA-mediated ceRNA network components provide invaluable biomarkers. The current study provides a comprehensive and up-to-date review of the recent findings on the significance of these ceRNA networks in the hallmarks of ovarian cancer oncogenesis, treatment, diagnosis, and prognosis. Also, it provides the authorship with future perspectives in the era of single-cell RNA sequencing and personalized medicine.

{"title":"Competing endogenous RNA networks in ovarian cancer: from bench to bedside.","authors":"Roghaiyeh Derogar, Fatemeh Nejadi Orang, Mahdi Abdoli Shadbad","doi":"10.17179/excli2024-7827","DOIUrl":"10.17179/excli2024-7827","url":null,"abstract":"<p><p>Epithelial ovarian cancer is responsible for the majority of ovarian malignancies, and its highly invasive nature and chemoresistant development have been major obstacles to treating patients with mainstream treatments. In recent decades, the significance of microRNAs (miRNAs), circular RNAs (circRNAs), long non-coding RNAs (lncRNAs), and competing endogenous RNAs (ceRNAs) has been highlighted in ovarian cancer development. This hidden language between these RNAs has led to the discovery of enormous regulatory networks in ovarian cancer cells that substantially affect gene expression. Aside from providing ample opportunities for targeted therapies, circRNA- and lncRNA-mediated ceRNA network components provide invaluable biomarkers. The current study provides a comprehensive and up-to-date review of the recent findings on the significance of these ceRNA networks in the hallmarks of ovarian cancer oncogenesis, treatment, diagnosis, and prognosis. Also, it provides the authorship with future perspectives in the era of single-cell RNA sequencing and personalized medicine.</p>","PeriodicalId":12247,"journal":{"name":"EXCLI Journal","volume":"24 ","pages":"86-112"},"PeriodicalIF":3.8,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11830916/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143448061","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Characterizing psychological states in professional athletes through EEG: sex-based differences.
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2025-01-03 eCollection Date: 2025-01-01 DOI: 10.17179/excli2024-7980
Kittichai Tharawadeepimuk, Ampika Nanbancha, Ekarat Onnom

The psychological states are essential to maintain a healthy balance and optimize performance, especially in athletes. Sex-related differences in elite athletes are one of the important factors, which are ambiguous. This study aims to explore sex differences in psychological states of 36 professional athletes (12M/24F, 21.6±3.9 y, 166.3±8.9 cm, 56.4±11.3 kg, mean±SD) in the lead-up to a major international competition using objective (quantitative electroencephalogram, QEEG) and subjective measures (Athletic Coping Skills Inventory, ASCI-28). Participants included fifteen gymnasts, eleven swimmers, and ten e-sports players. QEEG measurements were collected during 5 minutes at rest before athletes completed the ASCI-28 scale. Data were obtained during training camp within 3 months before the competition. QEEG data were analyzed using a generalized linear mixed modeling (GLMM) to report the linear predictor of QEEG in brain areas (random) and sex (fixed). A multivariate analysis of variance (MANOVA) was applied to ACSI-28 subscales data to compare sex groups. Female athletes exhibited higher EEG activity in the theta power in the parietal and occipital areas and the beta power in the pre-frontal and temporal areas. Furthermore, significant sex differences were found in the coping with adversity (p =0.038) and goal setting/mental preparation subscales of the ACSI-28. The correlations between the QEEG and questionnaire scores were low to moderate correlations for female athletes, and moderate correlations for male athletes. A significant correlation was observed in both male and female athletes between activity in the temporal region within theta and beta frequency bands (QEEG), and the coping with aversity subscale (questionnaire). These findings provide valuable insights for sports psychologists to design appropriate psychological interventions and for future studies examining the impact of differential psychological interventions for male and female athletes to optimize well-being and performance.

{"title":"Characterizing psychological states in professional athletes through EEG: sex-based differences.","authors":"Kittichai Tharawadeepimuk, Ampika Nanbancha, Ekarat Onnom","doi":"10.17179/excli2024-7980","DOIUrl":"10.17179/excli2024-7980","url":null,"abstract":"<p><p>The psychological states are essential to maintain a healthy balance and optimize performance, especially in athletes. Sex-related differences in elite athletes are one of the important factors, which are ambiguous. This study aims to explore sex differences in psychological states of 36 professional athletes (12M/24F, 21.6±3.9 y, 166.3±8.9 cm, 56.4±11.3 kg, mean±SD) in the lead-up to a major international competition using objective (quantitative electroencephalogram, QEEG) and subjective measures (Athletic Coping Skills Inventory, ASCI-28). Participants included fifteen gymnasts, eleven swimmers, and ten e-sports players. QEEG measurements were collected during 5 minutes at rest before athletes completed the ASCI-28 scale. Data were obtained during training camp within 3 months before the competition. QEEG data were analyzed using a generalized linear mixed modeling (GLMM) to report the linear predictor of QEEG in brain areas (random) and sex (fixed). A multivariate analysis of variance (MANOVA) was applied to ACSI-28 subscales data to compare sex groups. Female athletes exhibited higher EEG activity in the theta power in the parietal and occipital areas and the beta power in the pre-frontal and temporal areas. Furthermore, significant sex differences were found in the coping with adversity (<i>p</i> =0.038) and goal setting/mental preparation subscales of the ACSI-28. The correlations between the QEEG and questionnaire scores were low to moderate correlations for female athletes, and moderate correlations for male athletes. A significant correlation was observed in both male and female athletes between activity in the temporal region within theta and beta frequency bands (QEEG), and the coping with aversity subscale (questionnaire). These findings provide valuable insights for sports psychologists to design appropriate psychological interventions and for future studies examining the impact of differential psychological interventions for male and female athletes to optimize well-being and performance.</p>","PeriodicalId":12247,"journal":{"name":"EXCLI Journal","volume":"24 ","pages":"1-14"},"PeriodicalIF":3.8,"publicationDate":"2025-01-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11847956/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143491447","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis, biological investigation, and in silico studies of 2-aminothiazole sulfonamide derivatives as potential antioxidants. 作为潜在抗氧化剂的 2-氨基噻唑磺酰胺衍生物的合成、生物学调查和硅学研究。
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2025-01-03 eCollection Date: 2025-01-01 DOI: 10.17179/excli2024-7855
Apilak Worachartcheewan, Ratchanok Pingaew, Veda Prachayasittikul, Setthawut Apiraksattayakul, Supaluk Prachayasittikul, Somsak Ruchirawat, Virapong Prachayasittikul

Antioxidant compounds have gained current interest as potential protective agents for several therapeutic applications. Antimicrobial drug resistance and infectious diseases also still be concerning globally health issues. Accordingly, the discovery of new antioxidative and antimicrobial agents is essential for human well-being. Thiazole and sulfonamide are privileged scaffolds in drug discovery due to their various bioactive properties. In this study, a series of 2-aminothiazole sulfonamide derivatives (1 - 12) were synthesized and investigated for their antioxidant (i.e., DPPH and SOD-mimic) and antimicrobial activities. Among tested compounds, compound 8 was the most promising one with potent DPPH and SOD (%DPPH = 90.09 %, %SOD = 99.02 %). However, none of these compounds are active antimicrobial agents. Quantitative structure-activity relationship (QSAR) modeling was performed in which the key findings were further used to guide the rational design of additional derivatives. Two antioxidant QSAR models (i.e., DPPH and SOD) were constructed using multiple linear regression (MLR) with good predictive performance. An additional set of structurally modified compounds were designed based on QSAR findings to finally obtain 112 newly designed compounds in which their activities (DPPH and SOD) were predicted. Most of the modified compounds performed better activities than their prototypes. Mass, polarizability, electronegativity, the presence of C-F bond, van der Waals volume, and structural symmetry were revealed as key properties influencing antioxidant activities. In summary, this study demonstrated the combination used of chemical synthesis, experimental assays, and computer-aided drug design for developing novel antioxidants for potential medicinal applications. See also the graphical abstract(Fig. 1).

{"title":"Synthesis, biological investigation, and in silico studies of 2-aminothiazole sulfonamide derivatives as potential antioxidants.","authors":"Apilak Worachartcheewan, Ratchanok Pingaew, Veda Prachayasittikul, Setthawut Apiraksattayakul, Supaluk Prachayasittikul, Somsak Ruchirawat, Virapong Prachayasittikul","doi":"10.17179/excli2024-7855","DOIUrl":"10.17179/excli2024-7855","url":null,"abstract":"<p><p>Antioxidant compounds have gained current interest as potential protective agents for several therapeutic applications. Antimicrobial drug resistance and infectious diseases also still be concerning globally health issues. Accordingly, the discovery of new antioxidative and antimicrobial agents is essential for human well-being. Thiazole and sulfonamide are privileged scaffolds in drug discovery due to their various bioactive properties. In this study, a series of 2-aminothiazole sulfonamide derivatives (<b>1</b> <b>-</b> <b>12</b>) were synthesized and investigated for their antioxidant (i.e., DPPH and SOD-mimic) and antimicrobial activities. Among tested compounds, compound <b>8</b> was the most promising one with potent DPPH and SOD (%DPPH = 90.09 %, %SOD = 99.02 %). However, none of these compounds are active antimicrobial agents. Quantitative structure-activity relationship (QSAR) modeling was performed in which the key findings were further used to guide the rational design of additional derivatives. Two antioxidant QSAR models (i.e., DPPH and SOD) were constructed using multiple linear regression (MLR) with good predictive performance. An additional set of structurally modified compounds were designed based on QSAR findings to finally obtain 112 newly designed compounds in which their activities (DPPH and SOD) were predicted. Most of the modified compounds performed better activities than their prototypes. Mass, polarizability, electronegativity, the presence of C-F bond, van der Waals volume, and structural symmetry were revealed as key properties influencing antioxidant activities. In summary, this study demonstrated the combination used of chemical synthesis, experimental assays, and computer-aided drug design for developing novel antioxidants for potential medicinal applications. See also the graphical abstract(Fig. 1).</p>","PeriodicalId":12247,"journal":{"name":"EXCLI Journal","volume":"24 ","pages":"60-81"},"PeriodicalIF":3.8,"publicationDate":"2025-01-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11830920/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143448261","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Brace yourselves, vaccine-preventable diseases are coming! The impact of war on polio and other vaccine-preventable diseases.
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2025-01-03 eCollection Date: 2025-01-01 DOI: 10.17179/excli2024-8022
Thalles Guilarducci Costa, Rizia Rocha-Silva, João Victor Rosa de Freitas, Bráulio Evangelista de Lima, Rodrigo Luiz Vancini, Marília Santos Andrade, Claudio Andre Barbosa de Lira
{"title":"Brace yourselves, vaccine-preventable diseases are coming! The impact of war on polio and other vaccine-preventable diseases.","authors":"Thalles Guilarducci Costa, Rizia Rocha-Silva, João Victor Rosa de Freitas, Bráulio Evangelista de Lima, Rodrigo Luiz Vancini, Marília Santos Andrade, Claudio Andre Barbosa de Lira","doi":"10.17179/excli2024-8022","DOIUrl":"10.17179/excli2024-8022","url":null,"abstract":"","PeriodicalId":12247,"journal":{"name":"EXCLI Journal","volume":"24 ","pages":"82-85"},"PeriodicalIF":3.8,"publicationDate":"2025-01-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11847959/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143491446","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Recent advances in the methods and clinical applications of next-generation sequencing in genomic profiling and precision cancer therapy.
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2025-01-03 eCollection Date: 2025-01-01 DOI: 10.17179/excli2024-7594
Ahad Amer Alsaiari

Cancer is a major cause of death worldwide. Next-generation sequencing (NGS) has dramatically increased the sequencing data output and transformed biomedical investigations. NGS enables the generations of genetic data specific to patients from tumor tissue samples so that targeted therapies can be used. The obtained data further allows the prioritization of effective therapies based on the tumor-specific genotype. Practitioners in the field of clinical genomics can make the best use of testing facilities while lessening the possible off-targets by choosing a priori gene set. Therefore, targeted sequencing has arisen as a more affordable technique for the genomic profiling of tumors. Drug resistance is commonly observed in cancer because of mutations. Thus, precise genetic and molecular profiling of tumors ought to be routinely done prior to the use of targeted therapy or precision cancer therapy. NGS already has the capacity to ameliorate genetic screening in families with previous histories of the high occurrence of various cancer-associated genes, including TP53, APC, BRCA2, and BRCA1. By using NGS system, researchers detected increased variants in cancer cells with greater specificity and sensitivity than conventional diagnostic approaches, which suggest the potential of NGS in diagnosis. The field of precision cancer therapy is continuously growing and because of their specificity at the molecular level has improved the management and treatment of numerous cancers. These therapies are less toxic and more efficient compared to conventional chemotherapies used in cancer treatment. The field of precision cancer therapy is likely to significantly expand as NGS system advances. This review provides extensive information regarding current advances in the NGS field in terms of methods, clinical applications, genomic profiling, and the role of NGS of precision cancer therapy.

{"title":"Recent advances in the methods and clinical applications of next-generation sequencing in genomic profiling and precision cancer therapy.","authors":"Ahad Amer Alsaiari","doi":"10.17179/excli2024-7594","DOIUrl":"10.17179/excli2024-7594","url":null,"abstract":"<p><p>Cancer is a major cause of death worldwide. Next-generation sequencing (NGS) has dramatically increased the sequencing data output and transformed biomedical investigations. NGS enables the generations of genetic data specific to patients from tumor tissue samples so that targeted therapies can be used. The obtained data further allows the prioritization of effective therapies based on the tumor-specific genotype. Practitioners in the field of clinical genomics can make the best use of testing facilities while lessening the possible off-targets by choosing a priori gene set. Therefore, targeted sequencing has arisen as a more affordable technique for the genomic profiling of tumors. Drug resistance is commonly observed in cancer because of mutations. Thus, precise genetic and molecular profiling of tumors ought to be routinely done prior to the use of targeted therapy or precision cancer therapy. NGS already has the capacity to ameliorate genetic screening in families with previous histories of the high occurrence of various cancer-associated genes, including <i>TP53, APC, BRCA2,</i> and <i>BRCA1</i>. By using NGS system, researchers detected increased variants in cancer cells with greater specificity and sensitivity than conventional diagnostic approaches, which suggest the potential of NGS in diagnosis. The field of precision cancer therapy is continuously growing and because of their specificity at the molecular level has improved the management and treatment of numerous cancers. These therapies are less toxic and more efficient compared to conventional chemotherapies used in cancer treatment. The field of precision cancer therapy is likely to significantly expand as NGS system advances. This review provides extensive information regarding current advances in the NGS field in terms of methods, clinical applications, genomic profiling, and the role of NGS of precision cancer therapy.</p>","PeriodicalId":12247,"journal":{"name":"EXCLI Journal","volume":"24 ","pages":"15-33"},"PeriodicalIF":3.8,"publicationDate":"2025-01-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11830917/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143448154","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A review on the role of nanoparticles for targeted brain drug delivery: synthesis, characterization, and applications. 纳米粒子在脑部靶向给药中的作用综述:合成、表征和应用。
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2025-01-03 eCollection Date: 2025-01-01 DOI: 10.17179/excli2024-7163
Payam Nawzad Mohammed, Narmin Hamaamin Hussen, Aso Hameed Hasan, Hozan Jaza Hama Salh, Joazaizulfazli Jamalis, Sumeer Ahmed, Ajmal R Bhat, Mohammad Amjad Kamal
<p><p>Unfortunately, nowadays, brain disorders, which include both neurological and mental disorders, are the main cause of years spent living with a disability worldwide. There are serious diseases with a high prevalence and a high mortality rate. However, the outmoded technical infrastructure makes their treatment difficult. The blood-brain barrier (BBB) serves as a protective mechanism for the central nervous system (CNS) and regulates its homeostatic processes. The brain is protected against injury and illness by an extremely complex system that precisely regulates the flow of ions, very few tiny molecules, and an even smaller number of macromolecules from the blood to the brain. Nevertheless, the BBB also considerably inhibits the delivery of medications to the brain, making it impossible to treat a variety of neurological diseases. Several strategies are now being studied to enhance the transport of drugs over the BBB. According to this research, nanoparticles are one of the most promising agents for brain disease treatment while many conventional drugs are also capable of crossing this barrier but there are amazing facts about nanoparticles in brain drug delivery. For example, 1. Precision Targeting: Through mechanisms such as receptor-mediated transport, ligand attachment, or the use of external stimuli (e.g., magnetic or thermal guidance), nanoparticles can deliver drugs specifically to diseased areas of the brain while minimizing exposure to healthy tissues. This targeted approach reduces side effects and enhances therapeutic outcomes. 2. Improved Drug Stability: Drugs can be encapsulated by nanoparticles, which keeps them stable and shields them from deterioration while being transported to the brain. 3. Therapeutic Payload: Nanoparticles possess a high surface-area-to-volume ratio, enabling them to encapsulate a substantial quantity of therapeutic agents relative to their size. This allows for enhanced drug delivery efficiency, maximizing therapeutic outcomes while potentially reducing the required dosage to achieve the desired effect. 4. Imaging Properties: Certain nanoparticles can also act as contrast agents for magnetic resonance imaging (MRI), allowing for the real-time visualization of drug distribution and administration in the brain. 5. Combination Therapy Possibility: Nanoparticles can be designed to co-deliver multiple medications or therapeutic agents, which could enhance synergistic effects. There have been <i>in vivo</i> studies where nanoparticles were successfully used for combination therapies, demonstrating potential for personalized treatments. One notable example is in cancer treatment, where nanoparticles have been designed to co-deliver multiple chemotherapeutic agents. In general, brain medication delivery by nanoparticles is a novel strategy that has the potential to revolutionize neurological disease therapy and enhance patient outcomes. The study furthermore includes a concise depiction of the structural and p
{"title":"A review on the role of nanoparticles for targeted brain drug delivery: synthesis, characterization, and applications.","authors":"Payam Nawzad Mohammed, Narmin Hamaamin Hussen, Aso Hameed Hasan, Hozan Jaza Hama Salh, Joazaizulfazli Jamalis, Sumeer Ahmed, Ajmal R Bhat, Mohammad Amjad Kamal","doi":"10.17179/excli2024-7163","DOIUrl":"10.17179/excli2024-7163","url":null,"abstract":"&lt;p&gt;&lt;p&gt;Unfortunately, nowadays, brain disorders, which include both neurological and mental disorders, are the main cause of years spent living with a disability worldwide. There are serious diseases with a high prevalence and a high mortality rate. However, the outmoded technical infrastructure makes their treatment difficult. The blood-brain barrier (BBB) serves as a protective mechanism for the central nervous system (CNS) and regulates its homeostatic processes. The brain is protected against injury and illness by an extremely complex system that precisely regulates the flow of ions, very few tiny molecules, and an even smaller number of macromolecules from the blood to the brain. Nevertheless, the BBB also considerably inhibits the delivery of medications to the brain, making it impossible to treat a variety of neurological diseases. Several strategies are now being studied to enhance the transport of drugs over the BBB. According to this research, nanoparticles are one of the most promising agents for brain disease treatment while many conventional drugs are also capable of crossing this barrier but there are amazing facts about nanoparticles in brain drug delivery. For example, 1. Precision Targeting: Through mechanisms such as receptor-mediated transport, ligand attachment, or the use of external stimuli (e.g., magnetic or thermal guidance), nanoparticles can deliver drugs specifically to diseased areas of the brain while minimizing exposure to healthy tissues. This targeted approach reduces side effects and enhances therapeutic outcomes. 2. Improved Drug Stability: Drugs can be encapsulated by nanoparticles, which keeps them stable and shields them from deterioration while being transported to the brain. 3. Therapeutic Payload: Nanoparticles possess a high surface-area-to-volume ratio, enabling them to encapsulate a substantial quantity of therapeutic agents relative to their size. This allows for enhanced drug delivery efficiency, maximizing therapeutic outcomes while potentially reducing the required dosage to achieve the desired effect. 4. Imaging Properties: Certain nanoparticles can also act as contrast agents for magnetic resonance imaging (MRI), allowing for the real-time visualization of drug distribution and administration in the brain. 5. Combination Therapy Possibility: Nanoparticles can be designed to co-deliver multiple medications or therapeutic agents, which could enhance synergistic effects. There have been &lt;i&gt;in vivo&lt;/i&gt; studies where nanoparticles were successfully used for combination therapies, demonstrating potential for personalized treatments. One notable example is in cancer treatment, where nanoparticles have been designed to co-deliver multiple chemotherapeutic agents. In general, brain medication delivery by nanoparticles is a novel strategy that has the potential to revolutionize neurological disease therapy and enhance patient outcomes. The study furthermore includes a concise depiction of the structural and p","PeriodicalId":12247,"journal":{"name":"EXCLI Journal","volume":"24 ","pages":"34-59"},"PeriodicalIF":3.8,"publicationDate":"2025-01-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11830919/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143448727","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Interaction between periodontal disease and colorectal cancer: implications of oral microbiota in carcinogenesis. 牙周病和结直肠癌之间的相互作用:口腔微生物群在癌变中的意义。
IF 3.8 3区 生物学 Q1 BIOLOGY Pub Date : 2024-12-13 eCollection Date: 2024-01-01 DOI: 10.17179/excli2024-7869
Thalles Yurgen Balduino, André Felipe Dos Santos Teles, Gabriel Leonardo Magrin, Marco Aurélio Bianchini
{"title":"Interaction between periodontal disease and colorectal cancer: implications of oral microbiota in carcinogenesis.","authors":"Thalles Yurgen Balduino, André Felipe Dos Santos Teles, Gabriel Leonardo Magrin, Marco Aurélio Bianchini","doi":"10.17179/excli2024-7869","DOIUrl":"10.17179/excli2024-7869","url":null,"abstract":"","PeriodicalId":12247,"journal":{"name":"EXCLI Journal","volume":"23 ","pages":"1493-1495"},"PeriodicalIF":3.8,"publicationDate":"2024-12-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11713988/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142946825","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
EXCLI Journal
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1