Pub Date : 2024-12-09eCollection Date: 2024-01-01DOI: 10.3389/fchem.2024.1456684
Mohamed El Ouardi, Aziz Drioiche, Fadoua El Makhoukhi, Jamal Mabrouki, Mohammed Hakmi, Omkulthom Al Kamaly, Bshra A Alsfouk, Brahim Eddamsyry, Hamid Khamar, Touriya Zair, Mohammed Alaoui El Belghiti
Introduction: Morocco is home to a remarkable diversity of flora, including several species from the Artemisia genus. This study aims to thoroughly examine the chemical composition of essential oils derived from Artemisia species and assess their antibacterial and antioxidant properties through in vitro experiments and in silico simulations.
Methods: Samples of Artemisia herba-alba Asso. were collected from Boulemane and Ifrane in Morocco, while Artemisia huguetii Caball. was sampled from Tata, representing regions of the Central Middle Atlas and Western Anti-Atlas. Essential oils were extracted using hydrodistillation, and their chemical composition was analyzed by gas chromatography-mass spectrometry (GC-MS). Antibacterial and antifungal activities were evaluated, and antioxidant properties were assessed using the DPPH assay. In silico predictions of antibacterial and antioxidant activities were performed using computational models.
Results: The extraction yields varied depending on the geographical origin, ranging from 1.54% to 2.78%. GC-MS analysis revealed significant differences in the chemical composition of the oils from different Artemisia species and regions, with a notable prevalence of oxygenated monoterpenes. Specifically, the oil from Boulemane was rich in thujone, the oil from Ifrane was predominantly composed of camphor, and the oil from Tata contained both camphor and thujone. The oils exhibited stronger antifungal than antibacterial properties, with Enterobacter cloacae strains showing high sensitivity, with minimum inhibitory concentrations (MIC) of approximately 12.5 mg/mL. The Boulemane oil of A. herba-alba displayed the highest antioxidant activity, effectively inhibiting DPPH at a concentration of 13.501 μg/mL.
Discussion: The in silico simulations predicted that the primary compounds in these essential oils, such as davanone, eucalyptol, camphor, and thujone, would exhibit potent antibacterial and antioxidant properties. These compounds were found to have favorable ADMET characteristics, including good blood-brain barrier permeability, gastrointestinal absorption, and skin penetration. Molecular docking studies revealed strong interactions between these compounds and key target proteins, such as NADPH-dependent catalase and dihydrofolate reductase. The stability of the protein-ligand complexes was confirmed by molecular dynamics, with davanone showing a significant impact. Overall, this study provides a comprehensive understanding of the biological potential of Artemisia essential oils, highlighting davanone as a promising molecule for medicinal or pharmaceutical applications.
{"title":"Chemical composition, antimicrobial, and antioxidant properties of essential oils from <i>Artemisia herba-alba</i> asso. and <i>Artemisia huguetii</i> caball. from Morocco: <i>in vitro</i> and <i>in silico</i> evaluation.","authors":"Mohamed El Ouardi, Aziz Drioiche, Fadoua El Makhoukhi, Jamal Mabrouki, Mohammed Hakmi, Omkulthom Al Kamaly, Bshra A Alsfouk, Brahim Eddamsyry, Hamid Khamar, Touriya Zair, Mohammed Alaoui El Belghiti","doi":"10.3389/fchem.2024.1456684","DOIUrl":"10.3389/fchem.2024.1456684","url":null,"abstract":"<p><strong>Introduction: </strong>Morocco is home to a remarkable diversity of flora, including several species from the Artemisia genus. This study aims to thoroughly examine the chemical composition of essential oils derived from Artemisia species and assess their antibacterial and antioxidant properties through in vitro experiments and in silico simulations.</p><p><strong>Methods: </strong>Samples of Artemisia herba-alba Asso. were collected from Boulemane and Ifrane in Morocco, while Artemisia huguetii Caball. was sampled from Tata, representing regions of the Central Middle Atlas and Western Anti-Atlas. Essential oils were extracted using hydrodistillation, and their chemical composition was analyzed by gas chromatography-mass spectrometry (GC-MS). Antibacterial and antifungal activities were evaluated, and antioxidant properties were assessed using the DPPH assay. In silico predictions of antibacterial and antioxidant activities were performed using computational models.</p><p><strong>Results: </strong>The extraction yields varied depending on the geographical origin, ranging from 1.54% to 2.78%. GC-MS analysis revealed significant differences in the chemical composition of the oils from different Artemisia species and regions, with a notable prevalence of oxygenated monoterpenes. Specifically, the oil from Boulemane was rich in thujone, the oil from Ifrane was predominantly composed of camphor, and the oil from Tata contained both camphor and thujone. The oils exhibited stronger antifungal than antibacterial properties, with Enterobacter cloacae strains showing high sensitivity, with minimum inhibitory concentrations (MIC) of approximately 12.5 mg/mL. The Boulemane oil of A. herba-alba displayed the highest antioxidant activity, effectively inhibiting DPPH at a concentration of 13.501 μg/mL.</p><p><strong>Discussion: </strong>The in silico simulations predicted that the primary compounds in these essential oils, such as davanone, eucalyptol, camphor, and thujone, would exhibit potent antibacterial and antioxidant properties. These compounds were found to have favorable ADMET characteristics, including good blood-brain barrier permeability, gastrointestinal absorption, and skin penetration. Molecular docking studies revealed strong interactions between these compounds and key target proteins, such as NADPH-dependent catalase and dihydrofolate reductase. The stability of the protein-ligand complexes was confirmed by molecular dynamics, with davanone showing a significant impact. Overall, this study provides a comprehensive understanding of the biological potential of Artemisia essential oils, highlighting davanone as a promising molecule for medicinal or pharmaceutical applications.</p>","PeriodicalId":12421,"journal":{"name":"Frontiers in Chemistry","volume":"12 ","pages":"1456684"},"PeriodicalIF":3.8,"publicationDate":"2024-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11663643/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142881770","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Detecting dissolved gases in transformer oil is crucial for assessing the operational status of transformers. The gas composition in transformer oil can reflect the health status of the equipment and help identify potential failure risks in a timely manner. Based on density functional theory (DFT), Pd and Rh atoms were doped into the h-BN monolayer, and the most stable adsorption structures for each were first explored. Then, the sensing performance of the Pd-doped and Rh-doped h-BN monolayers for H2, CH4, and C2H4 gases was analyzed. The results indicate that Pd-BN and Rh-BN exhibit enhanced sensitivity to H2 and C2H4 gases compared to pristine h-BN. However, they show poor adsorption characteristics for CH4. Both Pd-BN and Rh-BN demonstrate strong chemisorption for H2 and C2H4. In contrast, CH4 adsorption is predominantly physisorbed. The desorption time of H2 from Pd-BN at 398 K is 164 s, reflecting its excellent desorption performance. Additionally, Pd-BN and Rh-BN monolayers exhibit exceptional C2H4 capture capabilities, with adsorption energies of -1.697 eV and -2.188 eV, respectively, indicating their potential as C2H4 gas adsorbents. These findings provide theoretical insights for selecting materials for dissolved gas detection in oil and lay the groundwork for the development of Pd-BN and Rh-BN-based gas sensors.
{"title":"Novel gas sensing mechanisms of Pd and Rh-doped h-BN monolayers for detecting dissolved gases (H<sub>2</sub>、CH<sub>4</sub>、and C<sub>2</sub>H<sub>4</sub>) in transformer oil.","authors":"Jiaming Jiang, Dingqian Yang, Wen Zeng, Zhongchang Wang, Qu Zhou","doi":"10.3389/fchem.2024.1507905","DOIUrl":"10.3389/fchem.2024.1507905","url":null,"abstract":"<p><p>Detecting dissolved gases in transformer oil is crucial for assessing the operational status of transformers. The gas composition in transformer oil can reflect the health status of the equipment and help identify potential failure risks in a timely manner. Based on density functional theory (DFT), Pd and Rh atoms were doped into the h-BN monolayer, and the most stable adsorption structures for each were first explored. Then, the sensing performance of the Pd-doped and Rh-doped h-BN monolayers for H<sub>2</sub>, CH<sub>4</sub>, and C<sub>2</sub>H<sub>4</sub> gases was analyzed. The results indicate that Pd-BN and Rh-BN exhibit enhanced sensitivity to H<sub>2</sub> and C<sub>2</sub>H<sub>4</sub> gases compared to pristine h-BN. However, they show poor adsorption characteristics for CH<sub>4</sub>. Both Pd-BN and Rh-BN demonstrate strong chemisorption for H<sub>2</sub> and C<sub>2</sub>H<sub>4</sub>. In contrast, CH<sub>4</sub> adsorption is predominantly physisorbed. The desorption time of H<sub>2</sub> from Pd-BN at 398 K is 164 s, reflecting its excellent desorption performance. Additionally, Pd-BN and Rh-BN monolayers exhibit exceptional C<sub>2</sub>H<sub>4</sub> capture capabilities, with adsorption energies of -1.697 eV and -2.188 eV, respectively, indicating their potential as C<sub>2</sub>H<sub>4</sub> gas adsorbents. These findings provide theoretical insights for selecting materials for dissolved gas detection in oil and lay the groundwork for the development of Pd-BN and Rh-BN-based gas sensors.</p>","PeriodicalId":12421,"journal":{"name":"Frontiers in Chemistry","volume":"12 ","pages":"1507905"},"PeriodicalIF":3.8,"publicationDate":"2024-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11660182/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142876080","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-05eCollection Date: 2024-01-01DOI: 10.3389/fchem.2024.1502840
Guilherme Volpe Bossa, Sylvio May
Lattice-based mean-field models of ionic liquids neglect charge discreteness and ion correlations. To address these limitations, we propose separating the short-range and long-range parts of the electrostatic interaction by truncating the Coulomb potential below a fixed distance that is equal to or slightly larger than that between neighboring ions. Interactions and correlations between adjacent ions can then be modeled explicitly, whereas longer-ranged electrostatic interactions are captured on the mean-field level. We implement this approximation into the framework of modeling a compact, solvent-free ionic liquid by, first, considering terms up to the fourth order of the operator that represents the truncated Coulomb potential and, second, by accounting for electrostatic correlations between pairs of neighboring ions on the level of the quasi-chemical approach. A set of boundary conditions for the resulting self-consistent fourth-order differential equation follows from functional minimization of the free energy. The differential capacitance of an ionic liquid in contact with a planar electrode is calculated analytically up to quadratic order in the electrode's surface charge density by solving the linearized model and applying a perturbation approach valid beyond the linear regime. We demonstrate that charge discreteness enhances the differential capacitance, whereas electrostatic correlations between ion-ion pairs drive the transition from a bell-shaped to a camel-shaped profile of differential capacitance. Our approach offers a systematic way to further improve the treatment of charge discreteness, account for short-range electrostatic and non-electrostatic interactions, and include higher-order ion-ion correlations.
{"title":"Incorporation of charge discreteness and ion correlations into lattice models of ionic liquids.","authors":"Guilherme Volpe Bossa, Sylvio May","doi":"10.3389/fchem.2024.1502840","DOIUrl":"10.3389/fchem.2024.1502840","url":null,"abstract":"<p><p>Lattice-based mean-field models of ionic liquids neglect charge discreteness and ion correlations. To address these limitations, we propose separating the short-range and long-range parts of the electrostatic interaction by truncating the Coulomb potential below a fixed distance that is equal to or slightly larger than that between neighboring ions. Interactions and correlations between adjacent ions can then be modeled explicitly, whereas longer-ranged electrostatic interactions are captured on the mean-field level. We implement this approximation into the framework of modeling a compact, solvent-free ionic liquid by, first, considering terms up to the fourth order of the operator that represents the truncated Coulomb potential and, second, by accounting for electrostatic correlations between pairs of neighboring ions on the level of the quasi-chemical approach. A set of boundary conditions for the resulting self-consistent fourth-order differential equation follows from functional minimization of the free energy. The differential capacitance of an ionic liquid in contact with a planar electrode is calculated analytically up to quadratic order in the electrode's surface charge density by solving the linearized model and applying a perturbation approach valid beyond the linear regime. We demonstrate that charge discreteness enhances the differential capacitance, whereas electrostatic correlations between ion-ion pairs drive the transition from a bell-shaped to a camel-shaped profile of differential capacitance. Our approach offers a systematic way to further improve the treatment of charge discreteness, account for short-range electrostatic and non-electrostatic interactions, and include higher-order ion-ion correlations.</p>","PeriodicalId":12421,"journal":{"name":"Frontiers in Chemistry","volume":"12 ","pages":"1502840"},"PeriodicalIF":3.8,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11655214/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142863832","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-04eCollection Date: 2024-01-01DOI: 10.3389/fchem.2024.1498787
Flavio Polito, Laura De Martino, Giulia Mirabile, Giuseppe Venturella, Maria Letizia Gargano, Vincenzo De Feo, Hazem S Elshafie, Ippolito Camele
Background: The basidiomycetes Pleurotus eryngii var. ferulae Lanzi and P. eryngii var. elaeoselini Venturella et al. belong to the P. eryngii species complex, acting as facultative biotrophs in association with members of Apiaceae family, i.e., Ferula communis L. and Elaeoselinum asclepium L., respectively. The consumption of these fungi has rapidly increased in recent decades, not only thanks to their nutritional properties and pleasant flavor, but also for their bioactive and medicinal properties.
Methods: A quantitative study of their hydroalcoholic extracts was carried out by liquid chromatography-mass spectrometry. The potential antimicrobial activity of the extracts was also tested against some phytopathogenic bacteria [Clavibacter michiganensis and Bacillus megaterium (Gram-positive), Pseudomonas viridiflava, Xanthomonas campestris, and Escherichia coli (Gram-negative)] and fungi (Aspergillus fumigatus, Penicillium italicum, Monilinia laxa, Botrytis cinerea, Cadophora sp., and Sclerotinia sclerotiorum).
Results: The chemical analysis allowed the identification of secondary metabolites belonging to different classes, as flavonoids, organic acids, amino acids, carbohydrates, vitamins, nucleic acids, fatty acids, and triterpenoids. Both extracts demonstrated antimicrobial activity against of the most tested microorganisms.
Conclusion: The results can broaden the knowledge on the possible use of these fungal species in the agricultural sector.
背景:担子菌Pleurotus eryngii var. ferulae Lanzi和P. eryngii var. elaeoselini Venturella等属于P. eryngii种复合体,分别与蜂科成员阿魏(Ferula communis L.)和Elaeoselinum asclepium L.一起作为兼性生物营养菌。近几十年来,这些真菌的消费量迅速增加,不仅因为它们的营养特性和宜人的风味,而且还因为它们的生物活性和药用特性。方法:采用液相色谱-质谱联用技术对其水醇提取物进行定量研究。对部分植物病原菌(革兰氏阳性)、绿黄假单胞菌、油菜黄单胞菌、大肠杆菌(革兰氏阴性)和真菌(烟曲霉、意大利青霉、散念珠菌、灰霉病菌、菜青菌和菌核菌)的潜在抗菌活性进行了测试。结果:化学分析鉴定出黄酮类化合物、有机酸、氨基酸、碳水化合物、维生素、核酸、脂肪酸和三萜等次生代谢产物。两种提取物均显示出对大多数被测微生物的抑菌活性。结论:研究结果可拓宽对这些真菌在农业领域应用的认识。
{"title":"Composition and antimicrobial activity of hydroalcoholic extracts of <i>Pleurotus eryngii</i> var. <i>ferulae</i> and <i>P. eryngii</i> var. <i>elaeoselini</i>.","authors":"Flavio Polito, Laura De Martino, Giulia Mirabile, Giuseppe Venturella, Maria Letizia Gargano, Vincenzo De Feo, Hazem S Elshafie, Ippolito Camele","doi":"10.3389/fchem.2024.1498787","DOIUrl":"10.3389/fchem.2024.1498787","url":null,"abstract":"<p><strong>Background: </strong>The basidiomycetes <i>Pleurotus eryngii</i> var. <i>ferulae</i> Lanzi and <i>P. eryngii</i> var. <i>elaeoselini</i> Venturella et al. belong <i>to</i> the <i>P. eryngii</i> species complex, acting as facultative biotrophs in association with members of Apiaceae family, i.e., <i>Ferula communis</i> L. and <i>Elaeoselinum asclepium</i> L., respectively. The consumption of these fungi has rapidly increased in recent decades, not only thanks to their nutritional properties and pleasant flavor, but also for their bioactive and medicinal properties.</p><p><strong>Methods: </strong>A quantitative study of their hydroalcoholic extracts was carried out by liquid chromatography-mass spectrometry. The potential antimicrobial activity of the extracts was also tested against some phytopathogenic bacteria [<i>Clavibacter michiganensis</i> and <i>Bacillus megaterium</i> (Gram-positive), <i>Pseudomonas viridiflava, Xanthomonas campestris</i>, and <i>Escherichia coli</i> (Gram-negative)] and fungi (<i>Aspergillus fumigatus</i>, <i>Penicillium italicum</i>, <i>Monilinia laxa</i>, <i>Botrytis cinerea</i>, <i>Cadophora</i> sp., and <i>Sclerotinia sclerotiorum</i>).</p><p><strong>Results: </strong>The chemical analysis allowed the identification of secondary metabolites belonging to different classes, as flavonoids, organic acids, amino acids, carbohydrates, vitamins, nucleic acids, fatty acids, and triterpenoids. Both extracts demonstrated antimicrobial activity against of the most tested microorganisms.</p><p><strong>Conclusion: </strong>The results can broaden the knowledge on the possible use of these fungal species in the agricultural sector.</p>","PeriodicalId":12421,"journal":{"name":"Frontiers in Chemistry","volume":"12 ","pages":"1498787"},"PeriodicalIF":3.8,"publicationDate":"2024-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11652160/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142853673","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-04eCollection Date: 2024-01-01DOI: 10.3389/fchem.2024.1525034
Dong-Jun Kwon, JoAnna Milam-Guerreroa, Yun Young Choi, Nosang Vincent Myung
To fully harness the potential of smart textiles, it is cruical to develop energy harvesters which can function both as fabric and energy generator. In this work, we present a high performance low-cost piezoelectric nano-fabric using even-number Nylon (i.e., Nylon-6). Nylon-6 was chosen for optimal mechanical properties such as mechanical strength and stiffness. To maximize the voltage output, Nylon six nanofibers with varying diameter and crystallinity were synthesized by adjusting the polymer precursor and solvent, along with electrospinning parameters, followed by post thermal treatment. The average diameter of electrospun nanofibers was finely tuned (down to 36 nm) by adjusting solution polymer precursor content and electrospinning parameters. The content of desired piezoelectric-active γ crystal phase enhanced upto 76.4% by controlling solvent types and post thermal annealing. The highest peak to peak voltage (V33) of 1.96 V were achieved from γ-phase dominant (>60%) Nylon-6 nanofiber fabric which has an average nanofiber diameter of 36 nm with high fiber fraction (i.e., > 98%). Unlike its thin film counterpart, piezoelectric electrospun nanofiber fabric demonstrated durability against wear and washing. This work paves a new way to utilize Nylon-6 nanofibers in next-generation electronic textiles.
{"title":"Low-cost high performance piezoelectric fabrics based on Nylon-6 nanofibers.","authors":"Dong-Jun Kwon, JoAnna Milam-Guerreroa, Yun Young Choi, Nosang Vincent Myung","doi":"10.3389/fchem.2024.1525034","DOIUrl":"10.3389/fchem.2024.1525034","url":null,"abstract":"<p><p>To fully harness the potential of smart textiles, it is cruical to develop energy harvesters which can function both as fabric and energy generator. In this work, we present a high performance low-cost piezoelectric nano-fabric using even-number Nylon (<i>i.e.,</i> Nylon-6). Nylon-6 was chosen for optimal mechanical properties such as mechanical strength and stiffness. To maximize the voltage output, Nylon six nanofibers with varying diameter and crystallinity were synthesized by adjusting the polymer precursor and solvent, along with electrospinning parameters, followed by post thermal treatment. The average diameter of electrospun nanofibers was finely tuned (down to 36 nm) by adjusting solution polymer precursor content and electrospinning parameters. The content of desired piezoelectric-active γ crystal phase enhanced upto 76.4% by controlling solvent types and post thermal annealing. The highest peak to peak voltage (V<sub>33</sub>) of 1.96 V were achieved from γ-phase dominant (>60%) Nylon-6 nanofiber fabric which has an average nanofiber diameter of 36 nm with high fiber fraction (<i>i.e.,</i> > 98%). Unlike its thin film counterpart, piezoelectric electrospun nanofiber fabric demonstrated durability against wear and washing. This work paves a new way to utilize Nylon-6 nanofibers in next-generation electronic textiles.</p>","PeriodicalId":12421,"journal":{"name":"Frontiers in Chemistry","volume":"12 ","pages":"1525034"},"PeriodicalIF":3.8,"publicationDate":"2024-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11652212/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142853675","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-03eCollection Date: 2024-01-01DOI: 10.3389/fchem.2024.1504453
Conghao Gai, Ya Zhang, Shihao Zhang, Xueyan Hu, Yun-Qing Song, Xiaoyu Zhuang, Xiaoyun Chai, Yan Zou, Guang-Bo Ge, Qingjie Zhao
Halogens favorably contributes to the drug potency and metabolic stability via electrostatic interactions. Herein, the halogen effects on the reactivity of the halogenated 2,2,2-trifluoroacetophenones as serine-targeting covalent warheads were investigated. Our results showed that introducing halogen atoms, especially Cl or Br, into the phenyl scaffold would influence the electron density around the ring, which led to different time-dependent inhibition response to the target serine hydrolase (hCES1A). Co-crystallography analysis not only verified that halogenated molecules preferred to form covalent adducts, but also provided the conformational information for the design of covalent inhibitors targeting to hCES1A protein for the treatment of drug-induced acute enteritis.
{"title":"The study of halogen effect on the reactivity of the serine-targeting covalent warheads.","authors":"Conghao Gai, Ya Zhang, Shihao Zhang, Xueyan Hu, Yun-Qing Song, Xiaoyu Zhuang, Xiaoyun Chai, Yan Zou, Guang-Bo Ge, Qingjie Zhao","doi":"10.3389/fchem.2024.1504453","DOIUrl":"10.3389/fchem.2024.1504453","url":null,"abstract":"<p><p>Halogens favorably contributes to the drug potency and metabolic stability via electrostatic interactions. Herein, the halogen effects on the reactivity of the halogenated 2,2,2-trifluoroacetophenones as serine-targeting covalent warheads were investigated. Our results showed that introducing halogen atoms, especially Cl or Br, into the phenyl scaffold would influence the electron density around the ring, which led to different time-dependent inhibition response to the target serine hydrolase (hCES1A). Co-crystallography analysis not only verified that halogenated molecules preferred to form covalent adducts, but also provided the conformational information for the design of covalent inhibitors targeting to hCES1A protein for the treatment of drug-induced acute enteritis.</p>","PeriodicalId":12421,"journal":{"name":"Frontiers in Chemistry","volume":"12 ","pages":"1504453"},"PeriodicalIF":3.8,"publicationDate":"2024-12-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11649397/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142846481","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-03eCollection Date: 2024-01-01DOI: 10.3389/fchem.2024.1531189
Subhash C Sinha, Chinna Rajesh Ummadisetti, Kenneth K Laali, Kai Bao, Naga V S D K Bhupathiraju, Iwao Ojima
{"title":"Editorial: Spotlight on North America - chemical sciences.","authors":"Subhash C Sinha, Chinna Rajesh Ummadisetti, Kenneth K Laali, Kai Bao, Naga V S D K Bhupathiraju, Iwao Ojima","doi":"10.3389/fchem.2024.1531189","DOIUrl":"https://doi.org/10.3389/fchem.2024.1531189","url":null,"abstract":"","PeriodicalId":12421,"journal":{"name":"Frontiers in Chemistry","volume":"12 ","pages":"1531189"},"PeriodicalIF":3.8,"publicationDate":"2024-12-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11649432/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142846434","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-02eCollection Date: 2024-01-01DOI: 10.3389/fchem.2024.1506792
Shaobin Zhang, Hong Chen, Juan Hua, Shihong Luo
The Chinese medicinal plant Thesium chinense Turcz. is the only plant used in the manufacture of Bairui Granules. However, to date, there has been very little research into the cytotoxic activity of active substances derived from Bairui Granules. Using chemical separation and spectroscopic methods, phenolic compounds 1-5 were identified as methyl-p-hydroxycinnamate, vanillin, kaempferol, isorhamnetin-3-O-glucoside, and astragalin, respectively. UPLC-MS/MS analyses revealed that compounds 1-5 were present at concentrations of 0.006 ± 0.002, 1.63 ± 0.87, 3.65 ± 0.83, 26.97 ± 11.41, and 27.67 ± 2.91 μg/g, respectively in Bairui Granules. Compounds 1, 2, and 4 were detected here for the first time in Bairui Granules. Using co-culture experiments, isorhamnetin-3-O-glucoside (4) was found to be beneficial to the proliferation Chinese hamster ovary (CHO) cells (6.46% ± 0.86% to 38.45% ± 9.04%), natural killer cells from human umbilical cord blood (UCB NK cells) (25.68% ± 0.02% to 70.81% ± 0.26%), and mesenchymal stem cells from human umbilical cord blood (UCB MSC cells) (1.66% ± 0.05% to 27.64% ± 0.51%) when the concentration was similar to that found in Bairui granules. Moreover, vanillin (2) was conducive to UCB NK cells proliferation (28.21% ± 0.44%) at a concentration of 64 μg/mL, while maintaining cell viability. UCB NK cell proliferation was promoted at rates of 41.03% ± 0.48% to 67.22% ± 0.68% when astragalin (5) was present at low concentrations (8 and 16 μg/mL). Methyl-p-hydroxycinnamate (1) and vanillin (2) at different concentrations both had an inhibitory effect on the proliferation of natural killer cells from human peripheral blood (PB NK cells), but the inhibitory concentration ranges of these compounds were not equivalent to the concentration ranges of the compounds in Bairui Granules. These results provide a foundation for the safe use of T. chinense preparations.
{"title":"Cytotoxic activity of phenolic compounds in Bairui Granules obtained from the Chinese medicinal plant <i>Thesium chinense</i>.","authors":"Shaobin Zhang, Hong Chen, Juan Hua, Shihong Luo","doi":"10.3389/fchem.2024.1506792","DOIUrl":"10.3389/fchem.2024.1506792","url":null,"abstract":"<p><p>The Chinese medicinal plant <i>Thesium chinense</i> Turcz. is the only plant used in the manufacture of Bairui Granules. However, to date, there has been very little research into the cytotoxic activity of active substances derived from Bairui Granules. Using chemical separation and spectroscopic methods, phenolic compounds 1-5 were identified as methyl-<i>p</i>-hydroxycinnamate, vanillin, kaempferol, isorhamnetin-3-<i>O</i>-glucoside, and astragalin, respectively. UPLC-MS/MS analyses revealed that compounds 1-5 were present at concentrations of 0.006 ± 0.002, 1.63 ± 0.87, 3.65 ± 0.83, 26.97 ± 11.41, and 27.67 ± 2.91 <i>μ</i>g/g, respectively in Bairui Granules. Compounds 1, 2, and 4 were detected here for the first time in Bairui Granules. Using co-culture experiments, isorhamnetin-3-<i>O</i>-glucoside (4) was found to be beneficial to the proliferation Chinese hamster ovary (CHO) cells (6.46% ± 0.86% to 38.45% ± 9.04%), natural killer cells from human umbilical cord blood (UCB NK cells) (25.68% ± 0.02% to 70.81% ± 0.26%), and mesenchymal stem cells from human umbilical cord blood (UCB MSC cells) (1.66% ± 0.05% to 27.64% ± 0.51%) when the concentration was similar to that found in Bairui granules. Moreover, vanillin (2) was conducive to UCB NK cells proliferation (28.21% ± 0.44%) at a concentration of 64 <i>μ</i>g/mL, while maintaining cell viability. UCB NK cell proliferation was promoted at rates of 41.03% ± 0.48% to 67.22% ± 0.68% when astragalin (5) was present at low concentrations (8 and 16 <i>μ</i>g/mL). Methyl-<i>p</i>-hydroxycinnamate (1) and vanillin (2) at different concentrations both had an inhibitory effect on the proliferation of natural killer cells from human peripheral blood (PB NK cells), but the inhibitory concentration ranges of these compounds were not equivalent to the concentration ranges of the compounds in Bairui Granules. These results provide a foundation for the safe use of <i>T. chinense</i> preparations.</p>","PeriodicalId":12421,"journal":{"name":"Frontiers in Chemistry","volume":"12 ","pages":"1506792"},"PeriodicalIF":3.8,"publicationDate":"2024-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11646769/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142834874","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-02eCollection Date: 2024-01-01DOI: 10.3389/fchem.2024.1507834
Yuan Gao, Yang Zhang, Zhe Han, Chunhui Wang, Lei Zhang, Jie Qiu
Studies on cerium oxo clusters (CeOCs) are not only significant for understanding the redox and hydrolysis behaviors of Ce(III/IV) ions but also crucial for the rational synthesis of novel clusters and nanoceria with specific Ce(III)/Ce(IV) ratios. Here, two sets of reactions were conducted using cerium nitrate and H2O2-oxidized cerium nitrate, resulting in the formation of two distinct mixed-valent CeOCs [CeIII4CeIV10O14(OH)2(PhCO2)22(DMF)6] (Ce14) and [CeIII2CeIV22O28(OH)8(PhCO2)30(DMF)4] (Ce24C). These two clusters exhibit different structures and Ce(III)/Ce(IV) ratios, demonstrating the critical role of cerium oxidation states and the occurrence of redox reactions in cluster formation. Ce14 is the first tetradecanuclear CeOC with a novel structure, whereas Ce24C differed in its Ce(III)/Ce(IV) ratio, protonation levels of O atoms, and ligands from previously reported 24-nuclear CeOCs. Furthermore, various techniques were employed to investigate the formation process of these two clusters. X-ray photoelectron spectra (XPS) revealed that the white precipitates formed during the preparation of Ce14 contain Ce(III) ions, while the reddish-brown precipitates formed during the preparation of Ce24C contain a mixture of Ce(III) and Ce(IV) ions. These two precipitations were individually dissolved in N,N-Dimethylformamide (DMF). The evolution of solution color and ultraviolet-visible (UV-Vis) spectra over time revealed the gradual oxidation of partial Ce(III) ions by oxygen in the solution of the white precipitation. As Ce(IV) ions increased in this solution, time-resolved small angle X-ray scattering (SAXS) data demonstrated the self-assembly of the Ce14 clusters after 4 days. In contrast, SAXS data and UV-Vis spectra revealed the rapid assembly of Ce24C clusters within 2 h due to the initial coexistence of Ce(IV) and Ce(III) ions in the DMF solution of the reddish-brown precipitation. The continued reduction of partial Ce(IV) ions in this solution does not affect Ce24C clusters' formation and stability. Our studies expand the family of CeOCs and enhance our understanding of the effects of cerium's oxidation states on cluster formation.
{"title":"Two mixed-valent cerium oxo clusters: synthesis, structure, and self-assembly.","authors":"Yuan Gao, Yang Zhang, Zhe Han, Chunhui Wang, Lei Zhang, Jie Qiu","doi":"10.3389/fchem.2024.1507834","DOIUrl":"10.3389/fchem.2024.1507834","url":null,"abstract":"<p><p>Studies on cerium oxo clusters (CeOCs) are not only significant for understanding the redox and hydrolysis behaviors of Ce(III/IV) ions but also crucial for the rational synthesis of novel clusters and nanoceria with specific Ce(III)/Ce(IV) ratios. Here, two sets of reactions were conducted using cerium nitrate and H<sub>2</sub>O<sub>2</sub>-oxidized cerium nitrate, resulting in the formation of two distinct mixed-valent CeOCs [Ce<sup>III</sup> <sub>4</sub>Ce<sup>IV</sup> <sub>10</sub>O<sub>14</sub>(OH)<sub>2</sub>(PhCO<sub>2</sub>)<sub>22</sub>(DMF)<sub>6</sub>] (Ce<sub>14</sub>) and [Ce<sup>III</sup> <sub>2</sub>Ce<sup>IV</sup> <sub>22</sub>O<sub>28</sub>(OH)<sub>8</sub>(PhCO<sub>2</sub>)<sub>30</sub>(DMF)<sub>4</sub>] (Ce<sub>24C</sub>). These two clusters exhibit different structures and Ce(III)/Ce(IV) ratios, demonstrating the critical role of cerium oxidation states and the occurrence of redox reactions in cluster formation. Ce<sub>14</sub> is the first tetradecanuclear CeOC with a novel structure, whereas Ce<sub>24C</sub> differed in its Ce(III)/Ce(IV) ratio, protonation levels of O atoms, and ligands from previously reported 24-nuclear CeOCs. Furthermore, various techniques were employed to investigate the formation process of these two clusters. X-ray photoelectron spectra (XPS) revealed that the white precipitates formed during the preparation of Ce<sub>14</sub> contain Ce(III) ions, while the reddish-brown precipitates formed during the preparation of Ce<sub>24C</sub> contain a mixture of Ce(III) and Ce(IV) ions. These two precipitations were individually dissolved in N,N-Dimethylformamide (DMF). The evolution of solution color and ultraviolet-visible (UV-Vis) spectra over time revealed the gradual oxidation of partial Ce(III) ions by oxygen in the solution of the white precipitation. As Ce(IV) ions increased in this solution, time-resolved small angle X-ray scattering (SAXS) data demonstrated the self-assembly of the Ce<sub>14</sub> clusters after 4 days. In contrast, SAXS data and UV-Vis spectra revealed the rapid assembly of Ce<sub>24C</sub> clusters within 2 h due to the initial coexistence of Ce(IV) and Ce(III) ions in the DMF solution of the reddish-brown precipitation. The continued reduction of partial Ce(IV) ions in this solution does not affect Ce<sub>24C</sub> clusters' formation and stability. Our studies expand the family of CeOCs and enhance our understanding of the effects of cerium's oxidation states on cluster formation.</p>","PeriodicalId":12421,"journal":{"name":"Frontiers in Chemistry","volume":"12 ","pages":"1507834"},"PeriodicalIF":3.8,"publicationDate":"2024-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11646716/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142834875","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-02eCollection Date: 2024-01-01DOI: 10.3389/fchem.2024.1508912
Zhenghua Zhang, Yang Tian, Wenjun Gao, Yubin Hu, Liangping Luo, Lichang Lei, Shasha Shen, Dan Han
Objectives: Immune checkpoint inhibitors (ICIs) have demonstrated potential in inhibiting the growth of malignant pleural mesothelioma (MPM), and their efficacy is associated with the expression of programmed death-ligand 1(PD-L1). This study evaluated a PD-L1-targeted nanoprobe for detecting PD-L1 expression in a nude mouse model of malignant pleural mesothelioma (MPM).
Methods: A PD-L1-binding peptide (WL-12) was conjugated with superparamagnetic iron oxide nanoparticles (SPIONs) to create the nanoprobe WL-12@Fe₃O₄. The nanoprobe's stability, biotoxicity, targeting ability, and in vivo magnetic resonance (MR) imaging effects were assessed and compared to non-targeted Fe₃O₄ nanoparticles. ΔT2 values and PD-L1 expression were measured in H226 and MSTO-211H tumor tissues over 4 weeks to analyze correlations.
Results: The WL-12@Fe₃O₄ nanoprobe demonstrated uniform distribution and a spherical shape, with a larger size (43.82 nm) and lower surface potential (-9.34 ± 0.54 mV) compared to Fe₃O₄ (32.67 nm, -20.20 ± 0.88 mV, P < 0.05). The XPS and FT-IR analysis results indicate the successful coupling of WL-12 with Fe3O4. It was well dispersed in serum and saline and showed no cytotoxicity or organ damage in vivo. The probe selectively accumulated in PD-L1-expressing MPM cells, especially MSTO-211H, and exhibited significantly higher uptake in high PD-L1-expressing H460 cells (930.22 ± 11.75 ng/mL) compared to low PD-L1-expressing A549 cells (254.89 ± 17.33 ng/mL, P < 0.05). Tumor iron levels in the WL-12@Fe₃O₄ group were significantly elevated (141.02 ± 17.33 μg/g) compared to controls (36.43 ± 3.56 μg/g, P < 0.05), with no significant differences in other organs (P > 0.05). The T2 values of H226 and MSTO-211H tumors decreased after probe injection, with ΔT2 values significantly higher in the targeted group than the nontargeted group (P < 0.05). ΔT2 values increased over 4 weeks, correlating strongly with PD-L1 expression (P < 0.05).
Conclusion: The PD-L1-targeted nanoprobe with MRI is a promising tool for noninvasive, real-time assessment of PD-L1 expression in MPM.
{"title":"Detection of PD-L1 expression levels in malignant pleural mesothelioma with a targeted MRI nanoprobe <i>in vivo</i>.","authors":"Zhenghua Zhang, Yang Tian, Wenjun Gao, Yubin Hu, Liangping Luo, Lichang Lei, Shasha Shen, Dan Han","doi":"10.3389/fchem.2024.1508912","DOIUrl":"10.3389/fchem.2024.1508912","url":null,"abstract":"<p><strong>Objectives: </strong>Immune checkpoint inhibitors (ICIs) have demonstrated potential in inhibiting the growth of malignant pleural mesothelioma (MPM), and their efficacy is associated with the expression of programmed death-ligand 1(PD-L1). This study evaluated a PD-L1-targeted nanoprobe for detecting PD-L1 expression in a nude mouse model of malignant pleural mesothelioma (MPM).</p><p><strong>Methods: </strong>A PD-L1-binding peptide (WL-12) was conjugated with superparamagnetic iron oxide nanoparticles (SPIONs) to create the nanoprobe WL-12@Fe₃O₄. The nanoprobe's stability, biotoxicity, targeting ability, and <i>in vivo</i> magnetic resonance (MR) imaging effects were assessed and compared to non-targeted Fe₃O₄ nanoparticles. ΔT2 values and PD-L1 expression were measured in H226 and MSTO-211H tumor tissues over 4 weeks to analyze correlations.</p><p><strong>Results: </strong>The WL-12@Fe₃O₄ nanoprobe demonstrated uniform distribution and a spherical shape, with a larger size (43.82 nm) and lower surface potential (-9.34 ± 0.54 mV) compared to Fe₃O₄ (32.67 nm, -20.20 ± 0.88 mV, <i>P</i> < 0.05). The XPS and FT-IR analysis results indicate the successful coupling of WL-12 with Fe<sub>3</sub>O<sub>4.</sub> It was well dispersed in serum and saline and showed no cytotoxicity or organ damage <i>in vivo</i>. The probe selectively accumulated in PD-L1-expressing MPM cells, especially MSTO-211H, and exhibited significantly higher uptake in high PD-L1-expressing H460 cells (930.22 ± 11.75 ng/mL) compared to low PD-L1-expressing A549 cells (254.89 ± 17.33 ng/mL, <i>P</i> < 0.05). Tumor iron levels in the WL-12@Fe₃O₄ group were significantly elevated (141.02 ± 17.33 μg/g) compared to controls (36.43 ± 3.56 μg/g, <i>P</i> < 0.05), with no significant differences in other organs (<i>P</i> > 0.05). The T2 values of H226 and MSTO-211H tumors decreased after probe injection, with ΔT2 values significantly higher in the targeted group than the nontargeted group (<i>P</i> < 0.05). ΔT2 values increased over 4 weeks, correlating strongly with PD-L1 expression (<i>P</i> < 0.05).</p><p><strong>Conclusion: </strong>The PD-L1-targeted nanoprobe with MRI is a promising tool for noninvasive, real-time assessment of PD-L1 expression in MPM.</p>","PeriodicalId":12421,"journal":{"name":"Frontiers in Chemistry","volume":"12 ","pages":"1508912"},"PeriodicalIF":3.8,"publicationDate":"2024-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11650703/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142846416","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}