Pub Date : 2025-05-16eCollection Date: 2025-01-01DOI: 10.12688/gatesopenres.16347.1
Oisin Brady Bates, Alexandru Nicholas Grecu, Divya Iyer, Diarmuid Stokes, Walter Cullen, Joseph Gallagher
Rationale: Virtual exchanges are emerging as innovative educational tools with the potential to foster collaboration between High-Income Countries (HICs) and Low- and Middle-Income Countries (LMICs). These initiatives hold the potential to enhance intercultural competencies, promote equitable partnerships, and address resource disparities. Understanding the pedagogical underpinnings, challenges, and best practices of virtual exchanges is vital for developing scalable and sustainable integration into healthcare education.
Research question: To what extent have virtual exchanges in global health been reported in the literature to date, including their frameworks, impact and sustainability?
Inclusion criteria: Studies involving a global health virtual exchange between at least one HIC and one LMIC will be included. Sources in all healthcare contexts will be included. Non-English language publications and those solely using secondary data will be excluded.
Methods: The review will be conducted in line with the Joanna Briggs Institute guidance for scoping reviews (1). The following electronic databases will be searched: Medline Ovid, Embase, CINAHL & ERIC. A search of the grey literature will also be conducted. Three reviewers will independently screen the titles and abstracts and full texts for eligibility. Data extraction will be conducted independently by three reviewers. A narrative summary and tables will be presented. Key stakeholders will be consulted throughout the review.
Discussion: This scoping review will provide a comprehensive understanding of virtual exchanges in global health, outlining frameworks, outcomes, content and best practices. The findings will inform the development of evidence-based models to design and sustain virtual exchanges between HIC and LMICs, enhancing their impact in global health education and practice.
Registration: This protocol was registered to the Open Science Framework (OSF): DOI 10.17605/OSF.IO/MWHBP.
理由:虚拟交流正在成为一种创新的教育工具,具有促进高收入国家(HICs)与低收入和中等收入国家(LMICs)之间合作的潜力。这些举措具有提高跨文化能力、促进公平伙伴关系和解决资源差距的潜力。了解虚拟交换的教学基础、挑战和最佳实践对于开发可扩展和可持续的医疗保健教育集成至关重要。研究问题:迄今为止,全球卫生领域的虚拟交流在多大程度上得到了文献报道,包括其框架、影响和可持续性?纳入标准:将纳入涉及至少一个高收入国家和一个低收入国家之间全球卫生虚拟交换的研究。将包括所有医疗保健环境中的来源。非英语出版物和仅使用二手数据的出版物将被排除在外。方法:根据乔安娜布里格斯研究所的范围审查指南进行审查(1)。将检索以下电子数据库:Medline Ovid, Embase, CINAHL和ERIC。灰色文献的搜索也将进行。三名审稿人将独立筛选标题、摘要和全文的资格。数据提取将由三名审稿人独立进行。将提出一份叙述性摘要和表格。在整个审查过程中,将征求主要利益相关者的意见。讨论:这次范围审查将全面了解全球卫生领域的虚拟交流,概述框架、成果、内容和最佳做法。研究结果将为发展基于证据的模型提供信息,以设计和维持高收入国家和中低收入国家之间的虚拟交流,增强它们在全球卫生教育和实践中的影响。注册:本协议已注册到开放科学框架(OSF): DOI 10.17605/OSF. io /MWHBP。
{"title":"Mapping the impact, sustainability and pedagogical frameworks of international virtual knowledge exchanges in global health: Protocol for a scoping review.","authors":"Oisin Brady Bates, Alexandru Nicholas Grecu, Divya Iyer, Diarmuid Stokes, Walter Cullen, Joseph Gallagher","doi":"10.12688/gatesopenres.16347.1","DOIUrl":"10.12688/gatesopenres.16347.1","url":null,"abstract":"<p><strong>Rationale: </strong>Virtual exchanges are emerging as innovative educational tools with the potential to foster collaboration between High-Income Countries (HICs) and Low- and Middle-Income Countries (LMICs). These initiatives hold the potential to enhance intercultural competencies, promote equitable partnerships, and address resource disparities. Understanding the pedagogical underpinnings, challenges, and best practices of virtual exchanges is vital for developing scalable and sustainable integration into healthcare education.</p><p><strong>Research question: </strong>To what extent have virtual exchanges in global health been reported in the literature to date, including their frameworks, impact and sustainability?</p><p><strong>Inclusion criteria: </strong>Studies involving a global health virtual exchange between at least one HIC and one LMIC will be included. Sources in all healthcare contexts will be included. Non-English language publications and those solely using secondary data will be excluded.</p><p><strong>Methods: </strong>The review will be conducted in line with the Joanna Briggs Institute guidance for scoping reviews (1). The following electronic databases will be searched: Medline Ovid, Embase, CINAHL & ERIC. A search of the grey literature will also be conducted. Three reviewers will independently screen the titles and abstracts and full texts for eligibility. Data extraction will be conducted independently by three reviewers. A narrative summary and tables will be presented. Key stakeholders will be consulted throughout the review.</p><p><strong>Discussion: </strong>This scoping review will provide a comprehensive understanding of virtual exchanges in global health, outlining frameworks, outcomes, content and best practices. The findings will inform the development of evidence-based models to design and sustain virtual exchanges between HIC and LMICs, enhancing their impact in global health education and practice.</p><p><strong>Registration: </strong>This protocol was registered to the Open Science Framework (OSF): DOI 10.17605/OSF.IO/MWHBP.</p>","PeriodicalId":12593,"journal":{"name":"Gates Open Research","volume":"9 ","pages":"36"},"PeriodicalIF":0.0,"publicationDate":"2025-05-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12084517/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144093367","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-05-07eCollection Date: 2025-01-01DOI: 10.12688/gatesopenres.16346.1
Kristin Bietsch, Margaret Reeves, Jessica Williamson, Priya Emmart, Emily Sonneveldt
Estimated Modern Use (EMU) is a novel, service statistics-based indicator designed to complement Couple Years of Protection (CYP) in assessing the scale of family planning use and the first widely used metric since CYPs. Developed by the Track20 project, EMU offers a population-based proportional metric that facilitates cross-country comparisons and temporal trend analysis. By leveraging existing family planning service statistics, EMU provides a more accessible and interpretable measure of contraceptive use. The associated SS-to-EMU tool used to calculate EMU incorporates rigorous data quality review mechanisms, including data visualizations and validated review processes, to enhance the reliability and utility of family planning data for decision-making. The standardization of EMU across countries and projects promotes its integration into routine data review practices, fostering a more comprehensive approach to family planning monitoring and evaluation. Since 2014, all countries that prepare annual estimates for the FP2030 global initiative utilize the SS to EMU tool, to assess data quality and produce EMU estimates. Moreover, the EMU serves as a valuable input for the Family Planning Estimation Tool (FPET), contributing to the refinement of modeled estimates of modern contraceptive prevalence. Since its introduction, EMU has gained widespread adoption at various levels, demonstrating its effectiveness in informing global, regional, and country-level monitoring efforts. Ongoing refinements to the EMU calculation further enhance its accuracy and utility as a supplementary data source for understanding contraceptive use patterns.
估计现代使用(EMU)是一种基于服务统计的新型指标,旨在补充夫妇保护(CYP)评估计划生育使用规模的工作,也是自CYP以来第一个广泛使用的指标。由Track20项目开发,EMU提供了一个基于人口的比例度量,便于跨国比较和时间趋势分析。通过利用现有的计划生育服务统计数据,欧洲货币联盟提供了一种更容易获得和可解释的避孕措施使用衡量标准。相关的SS-to-EMU工具用于计算EMU,它结合了严格的数据质量审查机制,包括数据可视化和经过验证的审查过程,以提高计划生育数据的可靠性和实用性,为决策提供支持。经济货币联盟在各国和各项目之间的标准化促进了其纳入常规数据审查实践,促进了计划生育监测和评价的更全面方法。自2014年以来,所有为FP2030全球倡议编制年度估算的国家都使用SS to EMU工具来评估数据质量并编制EMU估算。此外,欧洲货币联盟为计划生育估计工具(FPET)提供了宝贵的输入,有助于改进现代避孕普及率的模型估计。自推出以来,欧洲货币联盟已在各级得到广泛采用,证明了其在为全球、区域和国家一级监测工作提供信息方面的有效性。对欧洲货币联盟计算的不断改进进一步提高了其准确性和实用性,作为了解避孕药具使用模式的补充数据源。
{"title":"Estimated Modern Use: Employing A Service Statistics-Based Indicator to Monitor Family Planning Programs.","authors":"Kristin Bietsch, Margaret Reeves, Jessica Williamson, Priya Emmart, Emily Sonneveldt","doi":"10.12688/gatesopenres.16346.1","DOIUrl":"10.12688/gatesopenres.16346.1","url":null,"abstract":"<p><p>Estimated Modern Use (EMU) is a novel, service statistics-based indicator designed to complement Couple Years of Protection (CYP) in assessing the scale of family planning use and the first widely used metric since CYPs. Developed by the Track20 project, EMU offers a population-based proportional metric that facilitates cross-country comparisons and temporal trend analysis. By leveraging existing family planning service statistics, EMU provides a more accessible and interpretable measure of contraceptive use. The associated SS-to-EMU tool used to calculate EMU incorporates rigorous data quality review mechanisms, including data visualizations and validated review processes, to enhance the reliability and utility of family planning data for decision-making. The standardization of EMU across countries and projects promotes its integration into routine data review practices, fostering a more comprehensive approach to family planning monitoring and evaluation. Since 2014, all countries that prepare annual estimates for the FP2030 global initiative utilize the SS to EMU tool, to assess data quality and produce EMU estimates. Moreover, the EMU serves as a valuable input for the Family Planning Estimation Tool (FPET), contributing to the refinement of modeled estimates of modern contraceptive prevalence. Since its introduction, EMU has gained widespread adoption at various levels, demonstrating its effectiveness in informing global, regional, and country-level monitoring efforts. Ongoing refinements to the EMU calculation further enhance its accuracy and utility as a supplementary data source for understanding contraceptive use patterns.</p>","PeriodicalId":12593,"journal":{"name":"Gates Open Research","volume":"9 ","pages":"17"},"PeriodicalIF":0.0,"publicationDate":"2025-05-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12489022/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145232272","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Typhoid intestinal perforation (TIP) is a life-threatening, late complication of typhoid fever that disproportionately impacts children in low resource settings and continues to have devastating consequences worldwide. Despite elimination of typhoid fever in most high income countries, typhoid fever and TIP remain endemic in many countries around the world as a result of inadequate investments in water, sanitation, and hygiene (WASH) and lack of access to vaccines. A first National Typhoid Conference was held in Niamey, Niger on July 22, 2023, where surgeons and other medical and health professionals from Niger convened with local and international health professionals to discuss their experiences with TIP and advocate for better prevention and treatment of the disease. The high number of intestinal perforations diagnosed during surgery, and the lack of capacity for performing blood cultures motivated surgeons in Niger to convene and share data on complications of typhoid, epidemiology, and diagnosis. TIP, a leading cause of peritonitis in Africa, often results in emergency surgery and has reported mortality rates up to 30% in pediatric patients. The availability of four safe and effective typhoid conjugate vaccines, two with committed financial support from Gavi, the Vaccine Alliance, makes prevention through vaccination a realistic near-option for typhoid fever to complement improvements in WASH.
{"title":"Surgical Complications of Typhoid Fever: First National Typhoid Conference in Niamey, Niger.","authors":"Harissou Adamou, Abdoulaye Maman Bachir, Yakoubou Sanoussi, Katherine Shafer, Leah Sukri, Laura Hobbs, Saidou Adama, Amadou Magagi Ibrahim, Ide Kadi, Zabeirou Oudou Abdou Aliou, Abdou Soley Aboul Aziz, Boubacar Moctar, Mahamadou Doutchi Altine, Brah Souleymane, Adehossi Eric, Joseph Emalieu Toko, Mamadou Saidou, Assan Abdoul Nasser, Lassane Kabore, Kathleen Neuzil, Rachid Sani","doi":"10.12688/gatesopenres.16348.1","DOIUrl":"10.12688/gatesopenres.16348.1","url":null,"abstract":"<p><p>Typhoid intestinal perforation (TIP) is a life-threatening, late complication of typhoid fever that disproportionately impacts children in low resource settings and continues to have devastating consequences worldwide. Despite elimination of typhoid fever in most high income countries, typhoid fever and TIP remain endemic in many countries around the world as a result of inadequate investments in water, sanitation, and hygiene (WASH) and lack of access to vaccines. A first National Typhoid Conference was held in Niamey, Niger on July 22, 2023, where surgeons and other medical and health professionals from Niger convened with local and international health professionals to discuss their experiences with TIP and advocate for better prevention and treatment of the disease. The high number of intestinal perforations diagnosed during surgery, and the lack of capacity for performing blood cultures motivated surgeons in Niger to convene and share data on complications of typhoid, epidemiology, and diagnosis. TIP, a leading cause of peritonitis in Africa, often results in emergency surgery and has reported mortality rates up to 30% in pediatric patients. The availability of four safe and effective typhoid conjugate vaccines, two with committed financial support from Gavi, the Vaccine Alliance, makes prevention through vaccination a realistic near-option for typhoid fever to complement improvements in WASH.</p>","PeriodicalId":12593,"journal":{"name":"Gates Open Research","volume":"9 ","pages":"16"},"PeriodicalIF":0.0,"publicationDate":"2025-05-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12489021/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145231945","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-03-03eCollection Date: 2025-01-01DOI: 10.12688/gatesopenres.16315.1
Chelsea B Polis, Francis O Obare, Irene V Bruce, Cynthia Banda, Lisa B Haddad, Antwanette Heyns, Petros Isaakidis, Mercy Kamupira, Terrance Kufakunesu, Zachary A Kwena, Farai Machinga, Regina F Magore, Aleck Mapangire, Mercy Marimirofa, Matheus Mathipa, Sanyukta Mathur, Mary Mudavanhu, Tatenda P Mujuru, Prisca Mutero, Betty Njoroge, Collen Nyatsambo, Sarah Okumu, Leah Omondi, Tevyne Omondi, Marlena G Plagianos, Greshon Rota, Samuel Sithole, Bruce Variano, J Brady Burnett-Zieman, Petina Musara, George Odwe, Gerald Hangaika, Serah Gitome, Elizabeth A Bukusi, Kuziwa Kuwenyi
Background: Expanding contraceptive options could better meet users' diverse needs and preferences. Annovera ® is a contraceptive vaginal ring that provides a year of pregnancy prevention while remaining under user control and allowing for regular menstrual cycles. This method may also help to reduce burdens on some health care and supply chain systems. However, knowledge gaps exist regarding initial and ongoing acceptability of contraceptive vaginal rings in African settings.
Methods: We will undertake an open-label, non-randomized, two-arm, parallel clinical acceptability study with an embedded qualitative component, based in clinics providing contraceptive services in Kenya and Zimbabwe. Women aged 18-45 interested in newly initiating or switching contraception will choose from among all available contraceptive options, including Annovera. We aim to enroll 200 participants selecting Annovera and 200 participants selecting either contraceptive injectables or pills. We will compare method uptake, continuation, and satisfaction over one year. Participants will complete questionnaires administered by study staff during two in-person visits (a screening/enrollment visit, and an end of study visit after 52 weeks of method use or at discontinuation) and four phone appointments (at 4, 12, 24, and 36 weeks of use). We will evaluate used rings for discoloration and residual drug levels. The qualitative component involve in-depth interviews with women in the clinical study, their sexual partners, and their service providers, to further examine drivers of and barriers to interest in and use of contraceptive vaginal rings.
Discussion: This study will explore acceptability of contraceptive vaginal rings in 'real-world' contraceptive service settings in two African countries. Findings will be based on actual ring use and contextualized via comparison to two other commonly available methods. As vaginal rings are being considered for multiple reproductive health indications, this work can fill key knowledge gaps and empower decision-makers with information needed to inform future investments in reproductive health.
{"title":"A comparison of acceptability of contraceptive vaginal rings, pills, and injectables among cisgender women in Kenya and Zimbabwe: protocol for a mixed-methods study.","authors":"Chelsea B Polis, Francis O Obare, Irene V Bruce, Cynthia Banda, Lisa B Haddad, Antwanette Heyns, Petros Isaakidis, Mercy Kamupira, Terrance Kufakunesu, Zachary A Kwena, Farai Machinga, Regina F Magore, Aleck Mapangire, Mercy Marimirofa, Matheus Mathipa, Sanyukta Mathur, Mary Mudavanhu, Tatenda P Mujuru, Prisca Mutero, Betty Njoroge, Collen Nyatsambo, Sarah Okumu, Leah Omondi, Tevyne Omondi, Marlena G Plagianos, Greshon Rota, Samuel Sithole, Bruce Variano, J Brady Burnett-Zieman, Petina Musara, George Odwe, Gerald Hangaika, Serah Gitome, Elizabeth A Bukusi, Kuziwa Kuwenyi","doi":"10.12688/gatesopenres.16315.1","DOIUrl":"10.12688/gatesopenres.16315.1","url":null,"abstract":"<p><strong>Background: </strong>Expanding contraceptive options could better meet users' diverse needs and preferences. Annovera <sup>®</sup> is a contraceptive vaginal ring that provides a year of pregnancy prevention while remaining under user control and allowing for regular menstrual cycles. This method may also help to reduce burdens on some health care and supply chain systems. However, knowledge gaps exist regarding initial and ongoing acceptability of contraceptive vaginal rings in African settings.</p><p><strong>Methods: </strong>We will undertake an open-label, non-randomized, two-arm, parallel clinical acceptability study with an embedded qualitative component, based in clinics providing contraceptive services in Kenya and Zimbabwe. Women aged 18-45 interested in newly initiating or switching contraception will choose from among all available contraceptive options, including Annovera. We aim to enroll 200 participants selecting Annovera and 200 participants selecting either contraceptive injectables or pills. We will compare method uptake, continuation, and satisfaction over one year. Participants will complete questionnaires administered by study staff during two in-person visits (a screening/enrollment visit, and an end of study visit after 52 weeks of method use or at discontinuation) and four phone appointments (at 4, 12, 24, and 36 weeks of use). We will evaluate used rings for discoloration and residual drug levels. The qualitative component involve in-depth interviews with women in the clinical study, their sexual partners, and their service providers, to further examine drivers of and barriers to interest in and use of contraceptive vaginal rings.</p><p><strong>Discussion: </strong>This study will explore acceptability of contraceptive vaginal rings in 'real-world' contraceptive service settings in two African countries. Findings will be based on actual ring use and contextualized via comparison to two other commonly available methods. As vaginal rings are being considered for multiple reproductive health indications, this work can fill key knowledge gaps and empower decision-makers with information needed to inform future investments in reproductive health.</p>","PeriodicalId":12593,"journal":{"name":"Gates Open Research","volume":"9 ","pages":"5"},"PeriodicalIF":0.0,"publicationDate":"2025-03-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11876155/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143556467","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-03-03eCollection Date: 2025-01-01DOI: 10.12688/gatesopenres.16314.1
Zachary Thomas Stavrou-Dowd, Clair Rose, Álvaro Acosta-Serrano, Lee Rafuse Haines
Background: The emergence of insecticide resistance in insects has led researchers to develop new control tools so that historic gains made in reducing disease transmission are not lost. Attractive targeted sugar baits (ATSBs) are a vector control tool being widely trialled to target insects that feed on plant sugars and blood. We designed a field-friendly, economical and more environmentally responsible sugar feeder for maintaining mosquito colonies and screening potential ATSB candidates.
Methods: We simultaneously tested, in both male and female Anopheles gambiae mosquitoes, the effect of adding three water-soluble medical and food dyes (Allura Red, fluorescein and tartrazine) to the sugar solution to identify those insects that had ingested sugar from the feeder. To test feeder efficacy to deliver a toxic substance, we assessed the killing using boric acid, which kills both male and female mosquitoes when ingested. Using microscopy techniques compatible with fieldwork, including the use of a mobile phone camera, we documented the efficacy and tissue specificity of the dyes on mosquitoes after they were continuously fed dyed sugar solutions.
Results: The easy-to-construct sugar feeder is an economical option for testing the efficacy of ATSB components on Anopheles gambiae mosquitoes . Allura Red AC was the preferred dye as it has low toxicity to mosquitoes and allows the researcher to quickly visualise the imbibed sugar meal within the abdomen. Feeding 1% fluorescein dye, but not 0.1%, for longer than five days induced systemic dye distribution, where the mosquito's wing veins, antennae and legs brightly fluoresced when examined by a handheld black light torch (395-400nm emission).
Discussion: Developing an affordable sugar feeder to maintain insectary-reared insects and test the efficacy of ATSB candidates involves designing a dye-labelled sugar bait station that is of low-toxicity, reusable and easy to construct using components available in low resource settings such as field stations.
{"title":"Design and validation of a low-cost sugar-feeder for resource-poor insectaries.","authors":"Zachary Thomas Stavrou-Dowd, Clair Rose, Álvaro Acosta-Serrano, Lee Rafuse Haines","doi":"10.12688/gatesopenres.16314.1","DOIUrl":"10.12688/gatesopenres.16314.1","url":null,"abstract":"<p><strong>Background: </strong>The emergence of insecticide resistance in insects has led researchers to develop new control tools so that historic gains made in reducing disease transmission are not lost. Attractive targeted sugar baits (ATSBs) are a vector control tool being widely trialled to target insects that feed on plant sugars and blood. We designed a field-friendly, economical and more environmentally responsible sugar feeder for maintaining mosquito colonies and screening potential ATSB candidates.</p><p><strong>Methods: </strong>We simultaneously tested, in both male and female <i>Anopheles gambiae</i> mosquitoes, the effect of adding three water-soluble medical and food dyes (Allura Red, fluorescein and tartrazine) to the sugar solution to identify those insects that had ingested sugar from the feeder. To test feeder efficacy to deliver a toxic substance, we assessed the killing using boric acid, which kills both male and female mosquitoes when ingested. Using microscopy techniques compatible with fieldwork, including the use of a mobile phone camera, we documented the efficacy and tissue specificity of the dyes on mosquitoes after they were continuously fed dyed sugar solutions.</p><p><strong>Results: </strong>The easy-to-construct sugar feeder is an economical option for testing the efficacy of ATSB components on <i>Anopheles gambiae</i> mosquitoes <i>.</i> Allura Red AC was the preferred dye as it has low toxicity to mosquitoes and allows the researcher to quickly visualise the imbibed sugar meal within the abdomen. Feeding 1% fluorescein dye, but not 0.1%, for longer than five days induced systemic dye distribution, where the mosquito's wing veins, antennae and legs brightly fluoresced when examined by a handheld black light torch (395-400nm emission).</p><p><strong>Discussion: </strong>Developing an affordable sugar feeder to maintain insectary-reared insects and test the efficacy of ATSB candidates involves designing a dye-labelled sugar bait station that is of low-toxicity, reusable and easy to construct using components available in low resource settings such as field stations.</p>","PeriodicalId":12593,"journal":{"name":"Gates Open Research","volume":"9 ","pages":"6"},"PeriodicalIF":0.0,"publicationDate":"2025-03-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11876154/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143556539","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-02-28eCollection Date: 2024-01-01DOI: 10.12688/gatesopenres.15078.3
Victoria Boydell, Kelsey Quinn Wright, Shatha Elnakib, Christine Galavotti
Background: Understanding people's interest in using modern contraception is critical to ensuring programs align with people's preferences and needs. Current measures of demand for contraception are misinterpreted. More direct measures of intention to use (ITU) contraception do exist but remain underexplored. This systematic review examines the relationship between intention to use and actual use of contraception.
Methods: We searched PubMed, PsycInfo, Web of Science, and the Cochrane Collaboration to identify studies published from 1975-2020 that: (1) examined contraceptive behaviour, (2) included measures of ITU and future contraceptive use, and (3) included at least one quantitative measure of association between ITU and actual use. The inclusion criteria were: 1) examined contraceptive behaviour (excluding condom use only), (2) included disaggregated integral measures of ITU contraceptives and later contraceptive use, (3) included at least one quantitative measure of the association between ITU contraceptives and actual contraceptive use, (4) study population was women of reproductive age, (5) were peer-reviewed, and (6) written in English.
Results: 10 prospective cohort studies met the inclusion criteria; these provided 28,749 person-years of data (N=10,925). Although we could pool the data for unadjusted odds ratios, a metanalysis was not possible. We calculated that 6 of the 10 studies indicated significant, increased, unadjusted odds of subsequent contraceptive use after reporting ITU. Of those, 3 study analyses reported significant, positive adjusted odds ratios for the relationship between intention to use and later contraceptive use across varying covariates. The range of confounding factors, particularly around sub-populations, points to the need for more research so that a meta-analysis can be done in the future.
Conclusions: People's self-reported ITU contraception has the potential to be a strong predictor of subsequent contraceptive use. Few studies directly examined the relationship between ITU and contraceptive uptake and recruitment was primarily pregnant or postpartum samples.
背景:了解人们对使用现代避孕的兴趣对于确保项目符合人们的偏好和需求至关重要。目前避孕需求的衡量标准被误解了。使用(国际电联)避孕意向的更直接措施确实存在,但仍未得到充分探索。本系统综述探讨了避孕意图和实际使用之间的关系。方法:我们检索了PubMed、PsycInfo、Web of Science和Cochrane Collaboration,以确定1975-2020年间发表的研究:(1)检查了避孕行为,(2)包括国际电联和未来避孕措施的使用措施,(3)包括至少一项国际电联和实际使用之间关联的定量措施。纳入标准是:1)检查避孕行为(不包括仅使用安全套),(2)包括国际电联避孕措施和后来避孕措施使用的分类综合措施,(3)包括至少一项国际电联避孕措施与实际避孕措施使用之间关联的定量措施,(4)研究人群为育龄妇女,(5)经过同行评审,(6)以英文撰写。结果:10项前瞻性队列研究符合纳入标准;这些提供了28,749人年的数据(N=10,925)。虽然我们可以汇总未经调整的优势比数据,但不可能进行荟萃分析。我们计算出,10项研究中有6项表明,在向国际电联报告后,随后使用避孕药具的几率显著增加,且未经调整。其中,3项研究分析报告了在不同协变量中,使用避孕药的意图与后来使用避孕药之间的关系具有显著的正校正比值比。混杂因素的范围,特别是围绕亚人群的因素,表明需要进行更多的研究,以便将来进行荟萃分析。结论:人们自我报告的国际电联避孕有可能成为随后使用避孕措施的有力预测指标。很少有研究直接审查国际电联与避孕药具摄取和招募之间的关系,主要是孕妇或产后抽样。
{"title":"Toward person-centred measures of contraceptive demand: a systematic review of the relationship between intentions to use and actual use of contraception.","authors":"Victoria Boydell, Kelsey Quinn Wright, Shatha Elnakib, Christine Galavotti","doi":"10.12688/gatesopenres.15078.3","DOIUrl":"https://doi.org/10.12688/gatesopenres.15078.3","url":null,"abstract":"<p><strong>Background: </strong>Understanding people's interest in using modern contraception is critical to ensuring programs align with people's preferences and needs. Current measures of demand for contraception are misinterpreted. More direct measures of intention to use (ITU) contraception do exist but remain underexplored. This systematic review examines the relationship between intention to use and actual use of contraception.</p><p><strong>Methods: </strong>We searched PubMed, PsycInfo, Web of Science, and the Cochrane Collaboration to identify studies published from 1975-2020 that: (1) examined contraceptive behaviour, (2) included measures of ITU and future contraceptive use, and (3) included at least one quantitative measure of association between ITU and actual use. The inclusion criteria were: 1) examined contraceptive behaviour (excluding condom use only), (2) included disaggregated integral measures of ITU contraceptives and later contraceptive use, (3) included at least one quantitative measure of the association between ITU contraceptives and actual contraceptive use, (4) study population was women of reproductive age, (5) were peer-reviewed, and (6) written in English.</p><p><strong>Results: </strong>10 prospective cohort studies met the inclusion criteria; these provided 28,749 person-years of data (N=10,925). Although we could pool the data for unadjusted odds ratios, a metanalysis was not possible. We calculated that 6 of the 10 studies indicated significant, increased, unadjusted odds of subsequent contraceptive use after reporting ITU. Of those, 3 study analyses reported significant, positive adjusted odds ratios for the relationship between intention to use and later contraceptive use across varying covariates. The range of confounding factors, particularly around sub-populations, points to the need for more research so that a meta-analysis can be done in the future.</p><p><strong>Conclusions: </strong>People's self-reported ITU contraception has the potential to be a strong predictor of subsequent contraceptive use. Few studies directly examined the relationship between ITU and contraceptive uptake and recruitment was primarily pregnant or postpartum samples.</p>","PeriodicalId":12593,"journal":{"name":"Gates Open Research","volume":"8 ","pages":"1"},"PeriodicalIF":0.0,"publicationDate":"2025-02-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11634881/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144625910","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-02-27eCollection Date: 2024-01-01DOI: 10.12688/gatesopenres.15569.2
E Wangeci Kagucia, Shirine Voller, Abdhalah K Ziraba, Godfrey Bigogo, Patrick K Munywoki, Kimani Makobu, D James Nokes, James Nyagwange, Cameline Orlendo, Donald Akech, Antipa Sigilai, Clayton Onyango, Bonventure Juma, Amy Herman-Roloff, Peninah Munyua, Caroline Apondi, Shirley Lidechi, Allan Audi, Alice Ouma, George Aol, Thomas Misore, Caroline Nasimiyu, Dickens Onyango, Terrence Lo, Kadondi Kasera, Rose Jalang'o, Leonard Kingwara, Ifedayo Adetifa, Anthony O Etyang, George Warimwe, Ambrose Agweyu, J Anthony G Scott
The Kenya Multi Site Serosurveillance (KEMIS) collaboration set out to implement an integrated, nationally representative, population-based program of serological surveillance for past infection for a number of important infectious diseases in Kenya. The project started in December 2021 and built on a portfolio of SARS-CoV-2 research conducted in 2020 and 2021. In this profile paper, we describe the background of the KEMIS collaboration, its aim and objectives, the Health and Demographic Surveillance System sites that were involved in data collection, and the key activities undertaken. We also explain how we established governance and management of the KEMIS collaboration, and reflect on opportunities, challenges, lessons learned, and future directions.
{"title":"Profile: The Kenya Multi-Site Serosurveillance (KEMIS) collaboration.","authors":"E Wangeci Kagucia, Shirine Voller, Abdhalah K Ziraba, Godfrey Bigogo, Patrick K Munywoki, Kimani Makobu, D James Nokes, James Nyagwange, Cameline Orlendo, Donald Akech, Antipa Sigilai, Clayton Onyango, Bonventure Juma, Amy Herman-Roloff, Peninah Munyua, Caroline Apondi, Shirley Lidechi, Allan Audi, Alice Ouma, George Aol, Thomas Misore, Caroline Nasimiyu, Dickens Onyango, Terrence Lo, Kadondi Kasera, Rose Jalang'o, Leonard Kingwara, Ifedayo Adetifa, Anthony O Etyang, George Warimwe, Ambrose Agweyu, J Anthony G Scott","doi":"10.12688/gatesopenres.15569.2","DOIUrl":"10.12688/gatesopenres.15569.2","url":null,"abstract":"<p><p>The Kenya Multi Site Serosurveillance (KEMIS) collaboration set out to implement an integrated, nationally representative, population-based program of serological surveillance for past infection for a number of important infectious diseases in Kenya. The project started in December 2021 and built on a portfolio of SARS-CoV-2 research conducted in 2020 and 2021. In this profile paper, we describe the background of the KEMIS collaboration, its aim and objectives, the Health and Demographic Surveillance System sites that were involved in data collection, and the key activities undertaken. We also explain how we established governance and management of the KEMIS collaboration, and reflect on opportunities, challenges, lessons learned, and future directions.</p>","PeriodicalId":12593,"journal":{"name":"Gates Open Research","volume":"8 ","pages":"60"},"PeriodicalIF":0.0,"publicationDate":"2025-02-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12149407/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144265973","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Background: Disproportionate uptake of and access to maternal and child health services remain significant challenges across and within countries. Differing geographic, economic, environmental, and social factors contribute to varying degrees of vulnerabilities among individuals, which manifest as disparities in maternal and newborn health outcomes. Designing solutions according to need is vital to improve maternal and child health outcomes. In this paper, we describe our study protocol on developing and evaluating the effectiveness of human-centered design (HCD) solutions to improve maternal health service uptake among vulnerable pregnant women in rural areas of Ethiopia.
Methods: The study has two distinct phases. In Phase 1, HCD solutions were developed through co-design workshops with vulnerable pregnant women and key stakeholders. Final solutions included home visit education, audio programs promoting couple discussion, and print materials, implemented in collaboration with community health workers and health officers. A community-based, quasi-experimental, mixed-method study design was used to assess differences between intervention and control arms. A panel sample was enrolled after screening for pregnancy and vulnerability level and surveyed at baseline and midline in Phase 1. Phase 2 adopts an identical design approach with a focus on refining Phase 1 solutions. Newly recruited pregnant women will receive refined solutions for six months, which will be evaluated using post-only end-line surveys and in-depth interviews.
Conclusions and implications: Our sequential approach to evaluating initial solutions, which in turn will inform the enhancement of solutions, will provide practical insights into how solutions are accepted among vulnerable women and how they can be better integrated into women's lives and health systems. This will inform equity-focused practice and policies targeting populations experiencing greater barriers to accessing care and provide insights into system strengthening in rural areas. Our findings will be disseminated to the Ethiopian Ministry of Health and its partners to inform large-scale implementation at the national level.
{"title":"Developing and evaluating human-centered design solutions for enhancing maternal health service utilization among vulnerable pregnant women in Oromia, Ethiopia: Study protocol for a quasi-experimental study.","authors":"Bee-Ah Kang, Habtamu Tamene, Yihunie Lakew, Daryl Stephens, Rajiv Rimal","doi":"10.12688/gatesopenres.16277.3","DOIUrl":"10.12688/gatesopenres.16277.3","url":null,"abstract":"<p><strong>Background: </strong>Disproportionate uptake of and access to maternal and child health services remain significant challenges across and within countries. Differing geographic, economic, environmental, and social factors contribute to varying degrees of vulnerabilities among individuals, which manifest as disparities in maternal and newborn health outcomes. Designing solutions according to need is vital to improve maternal and child health outcomes. In this paper, we describe our study protocol on developing and evaluating the effectiveness of human-centered design (HCD) solutions to improve maternal health service uptake among vulnerable pregnant women in rural areas of Ethiopia.</p><p><strong>Methods: </strong>The study has two distinct phases. In Phase 1, HCD solutions were developed through co-design workshops with vulnerable pregnant women and key stakeholders. Final solutions included home visit education, audio programs promoting couple discussion, and print materials, implemented in collaboration with community health workers and health officers. A community-based, quasi-experimental, mixed-method study design was used to assess differences between intervention and control arms. A panel sample was enrolled after screening for pregnancy and vulnerability level and surveyed at baseline and midline in Phase 1. Phase 2 adopts an identical design approach with a focus on refining Phase 1 solutions. Newly recruited pregnant women will receive refined solutions for six months, which will be evaluated using post-only end-line surveys and in-depth interviews.</p><p><strong>Conclusions and implications: </strong>Our sequential approach to evaluating initial solutions, which in turn will inform the enhancement of solutions, will provide practical insights into how solutions are accepted among vulnerable women and how they can be better integrated into women's lives and health systems. This will inform equity-focused practice and policies targeting populations experiencing greater barriers to accessing care and provide insights into system strengthening in rural areas. Our findings will be disseminated to the Ethiopian Ministry of Health and its partners to inform large-scale implementation at the national level.</p>","PeriodicalId":12593,"journal":{"name":"Gates Open Research","volume":"8 ","pages":"93"},"PeriodicalIF":0.0,"publicationDate":"2025-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11723881/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142970409","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-31eCollection Date: 2024-01-01DOI: 10.12688/gatesopenres.15190.3
Walelegn W Yallew, Rediet Fasil, Della Berhanu, Konjit Wolde, Dedefo Teshite, Reena Sethi, Gayane Yenokyan, Yenealem Woldemariam, Stephanie Suhowatsky, Anne Hyre, Lisa Noguchi, Alemayehu Worku
Background: Adequate antenatal care (ANC) and facility-based delivery are linked to improved maternal and neonatal outcomes. Adequate ANC attendance and facility birth rates are increasing in Ethiopia but remain well below national goals and global recommendations. Group ANC (G-ANC), when implemented at higher-level facilities, is associated with improved quality and experience of ANC and increased ANC retention and facility-based delivery. The objectives of this study are to evaluate the acceptability, feasibility, and effectiveness of G-ANC delivered by health extension workers at the health-post level compared to conventional ANC on ANC attendance and facility-based delivery.
Methods: Group ANC will be piloted in five purposively selected health posts. The study design is a stepped-wedge trial to be conducted in 36 health posts within the catchment of six health centers, with randomization of the order of the intervention introduction done at the health-center level (clusters). The design includes three time periods: a six-month control period with no G-ANC implementation, followed by another six-month period when G-ANC will be introduced in half (n=18) of the study health posts, then a final six-month period when G-ANC will be implemented in the remaining 18 health posts. Each health post will form one cohort and conduct six monthly G-ANC meetings on a fixed day/time. The study will use quantitative and qualitative data collection approaches. The study has "pause and reflect" points designed for intervention iteration before rolling out to the next set of sites. The primary outcomes are the proportion of women with at least four ANC visits and the proportion who delivered in a health facility. Qualitative research will be conducted using in-depth interviews with pregnant women, health workers, facility managers, and regional health managers. The study will enroll 770 women across all phases.
Conclusions: The study will inform decision-makers locally and globally on whether G-ANC is a feasible service delivery model at the health-post level. Effectiveness of G-ANC at increasing ANC retention and facility-based delivery and its acceptability to pregnant women and health extension workers will be reported. Registration NCT05054491, ClinicalTrials.gov (September 23, 2021).
{"title":"Evaluation of the feasibility, acceptability, and impact of Group Antenatal Care at the health post level on continuation in antenatal care and facility based delivery in Ethiopia using a cluster randomized stepped-wedge design: Study protocol.","authors":"Walelegn W Yallew, Rediet Fasil, Della Berhanu, Konjit Wolde, Dedefo Teshite, Reena Sethi, Gayane Yenokyan, Yenealem Woldemariam, Stephanie Suhowatsky, Anne Hyre, Lisa Noguchi, Alemayehu Worku","doi":"10.12688/gatesopenres.15190.3","DOIUrl":"10.12688/gatesopenres.15190.3","url":null,"abstract":"<p><strong>Background: </strong>Adequate antenatal care (ANC) and facility-based delivery are linked to improved maternal and neonatal outcomes. Adequate ANC attendance and facility birth rates are increasing in Ethiopia but remain well below national goals and global recommendations. Group ANC (G-ANC), when implemented at higher-level facilities, is associated with improved quality and experience of ANC and increased ANC retention and facility-based delivery. The objectives of this study are to evaluate the acceptability, feasibility, and effectiveness of G-ANC delivered by health extension workers at the health-post level compared to conventional ANC on ANC attendance and facility-based delivery.</p><p><strong>Methods: </strong>Group ANC will be piloted in five purposively selected health posts. The study design is a stepped-wedge trial to be conducted in 36 health posts within the catchment of six health centers, with randomization of the order of the intervention introduction done at the health-center level (clusters). The design includes three time periods: a six-month control period with no G-ANC implementation, followed by another six-month period when G-ANC will be introduced in half (n=18) of the study health posts, then a final six-month period when G-ANC will be implemented in the remaining 18 health posts. Each health post will form one cohort and conduct six monthly G-ANC meetings on a fixed day/time. The study will use quantitative and qualitative data collection approaches. The study has \"pause and reflect\" points designed for intervention iteration before rolling out to the next set of sites. The primary outcomes are the proportion of women with at least four ANC visits and the proportion who delivered in a health facility. Qualitative research will be conducted using in-depth interviews with pregnant women, health workers, facility managers, and regional health managers. The study will enroll 770 women across all phases.</p><p><strong>Conclusions: </strong>The study will inform decision-makers locally and globally on whether G-ANC is a feasible service delivery model at the health-post level. Effectiveness of G-ANC at increasing ANC retention and facility-based delivery and its acceptability to pregnant women and health extension workers will be reported. Registration NCT05054491, ClinicalTrials.gov (September 23, 2021).</p>","PeriodicalId":12593,"journal":{"name":"Gates Open Research","volume":"8 ","pages":"29"},"PeriodicalIF":0.0,"publicationDate":"2025-01-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11813170/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144625908","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-20eCollection Date: 2025-01-01DOI: 10.12688/gatesopenres.16313.1
Ben J Brintz, Darwin J Operario, David Garrett Brown, Shanrui Wu, Lan Wang, Eric R Houpt, Daniel T Leung, Jie Liu, James A Platts-Mills
Background: The TaqMan Array Card (TAC) is an arrayed, high-throughput qPCR platform that can simultaneously detect multiple targets in a single reaction. However, the manual post-run analysis of TAC data is time consuming and subject to interpretation. We sought to automate the post-run analysis of TAC data using machine learning models.
Methods: We used 165,214 qPCR amplification curves from two studies to train and test two eXtreme Gradient Boosting (XGBoost) models. Previous manual analyses of the amplification curves by experts in qPCR analysis were used as the gold standard. First, a classification model predicted whether amplification occurred or not, and if so, a second model predicted the cycle threshold (Ct) value. We used 5-fold cross-validation to tune the models and assessed performance using accuracy, sensitivity, specificity, positive predictive value (PPV), negative predictive value (NPV), and mean absolute error (MAE). For external validation, we used 1,472 reactions previously analyzed by 17 laboratory scientists as part of an external quality assessment for a multisite study.
Results: In internal validation, the classification model achieved an accuracy of 0.996, sensitivity of 0.997, specificity of 0.993, PPV of 0.998, and NPV of 0.991. The Ct prediction model achieved a MAE of 0.590. In external validation, the automated analysis achieved an accuracy of 0.997 and a MAE of 0.611, and the automated analysis was more accurate than manual analyses by 14 of the 17 laboratory scientists.
Conclusions: We automated the post-run analysis of highly-arrayed qPCR data using machine learning models with high accuracy in comparison to a manual gold standard. This approach has the potential to save time and improve reproducibility in laboratories using the TAC platform and other high-throughput qPCR approaches.
{"title":"Automated post-run analysis of arrayed quantitative PCR amplification curves using machine learning.","authors":"Ben J Brintz, Darwin J Operario, David Garrett Brown, Shanrui Wu, Lan Wang, Eric R Houpt, Daniel T Leung, Jie Liu, James A Platts-Mills","doi":"10.12688/gatesopenres.16313.1","DOIUrl":"10.12688/gatesopenres.16313.1","url":null,"abstract":"<p><strong>Background: </strong>The TaqMan Array Card (TAC) is an arrayed, high-throughput qPCR platform that can simultaneously detect multiple targets in a single reaction. However, the manual post-run analysis of TAC data is time consuming and subject to interpretation. We sought to automate the post-run analysis of TAC data using machine learning models.</p><p><strong>Methods: </strong>We used 165,214 qPCR amplification curves from two studies to train and test two eXtreme Gradient Boosting (XGBoost) models. Previous manual analyses of the amplification curves by experts in qPCR analysis were used as the gold standard. First, a classification model predicted whether amplification occurred or not, and if so, a second model predicted the cycle threshold (Ct) value. We used 5-fold cross-validation to tune the models and assessed performance using accuracy, sensitivity, specificity, positive predictive value (PPV), negative predictive value (NPV), and mean absolute error (MAE). For external validation, we used 1,472 reactions previously analyzed by 17 laboratory scientists as part of an external quality assessment for a multisite study.</p><p><strong>Results: </strong>In internal validation, the classification model achieved an accuracy of 0.996, sensitivity of 0.997, specificity of 0.993, PPV of 0.998, and NPV of 0.991. The Ct prediction model achieved a MAE of 0.590. In external validation, the automated analysis achieved an accuracy of 0.997 and a MAE of 0.611, and the automated analysis was more accurate than manual analyses by 14 of the 17 laboratory scientists.</p><p><strong>Conclusions: </strong>We automated the post-run analysis of highly-arrayed qPCR data using machine learning models with high accuracy in comparison to a manual gold standard. This approach has the potential to save time and improve reproducibility in laboratories using the TAC platform and other high-throughput qPCR approaches.</p>","PeriodicalId":12593,"journal":{"name":"Gates Open Research","volume":"9 ","pages":"1"},"PeriodicalIF":0.0,"publicationDate":"2025-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11756513/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143028282","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}