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Draft Genome Sequence of the Antimicrobial-Producing Strain Paenibacillus elgii AC13. 产抗菌素菌株 Paenibacillus elgii AC13 的基因组序列草案。
Pub Date : 2018-06-28 DOI: 10.1128/genomeA.00573-18
Daniel Barros Ortega, Rosiane Andrade Costa, Allan Silva Pires, Thiago Fellipe Araújo, Janaina Fernandez Araújo, Adriane Silva Kurokawa, Beatriz Simas Magalhães, Alessandra Maria Moreira Reis, Octávio Luís Franco, Ricardo Henrique Kruger, Georgios Joannis Pappas, Cristine Chaves Barreto

A Paenibacillus elgii strain isolated from soil samples from Cerrado, Brazil, showed antimicrobial activity. Its genome sequence was acquired (GS20 FLX Titanium 454 platform) and comprises 108 contigs (N50, 198,427 bp) and 6,810 predicted sequences. Here, we shed some light on the antimicrobial genes of the strain, including a nonribosomal peptide synthetase (NRPS) module identified as part of a pelgipeptin gene cluster.

从巴西塞拉多(Cerrado)的土壤样本中分离出的一株埃尔吉百纳杆菌(Paenibacillus elgii)具有抗菌活性。我们获得了该菌株的基因组序列(GS20 FLX Titanium 454 平台),其中包括 108 个等位基因(N50,198,427 bp)和 6,810 个预测序列。在此,我们对该菌株的抗菌基因进行了一些研究,包括一个非核糖体肽合成酶(NRPS)模块,该模块被鉴定为 pelgipeptin 基因簇的一部分。
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引用次数: 0
Draft Genome Sequence of a Potentially Novel Streptococcus Species Belonging to the Streptococcus mitis Group. 一种潜在的新型链球菌属炎链球菌群的基因组序列草图。
Pub Date : 2018-06-28 DOI: 10.1128/genomeA.00620-18
Ingerid Ø Kirkeleite, Jon Bohlin, Lonneke Scheffer, Einar T Weme, Didrik F Vestrheim

We report here the draft genome sequence of a Streptococcus species belonging to the S. mitis group. While a clear species identification cannot be made for the isolate, it appears that its most recent common ancestor is the species S. pseudopneumoniae.

我们在这里报告的草案基因组序列的链球菌属S. mittis组。虽然不能对分离物进行明确的物种鉴定,但它最近的共同祖先似乎是假肺炎链球菌。
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引用次数: 2
Genome Sequence of the Soybean Cyst Nematode (Heterodera glycines) Endosymbiont "Candidatus Cardinium hertigii" Strain cHgTN10. 大豆囊性线虫(Heterodera glycines)内共生体“Candidatus Cardinium hertigii”菌株cHgTN10。
Pub Date : 2018-06-28 DOI: 10.1128/genomeA.00624-18
Kurt C Showmaker, Kimberly K O Walden, Christopher J Fields, Kris N Lambert, Matthew E Hudson

In this study, we present the genome sequence of the "Candidatus Cardinium hertigii" strain cHgTN10, an endosymbiotic bacterium of the plant-parasitic nematode Heterodera glycines This is the first genome assembly reported for an endosymbiont directly sequenced from a tylenchid nematode.

在这项研究中,我们展示了“Candidatus Cardinium hertigii”菌株cHgTN10的基因组序列,这是植物寄生线虫Heterodera glycines的内共生细菌。
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引用次数: 7
Genome Sequence of Torulaspora microellipsoides CLIB 830T. 微椭球虫CLIB 830T基因组序列。
Pub Date : 2018-06-28 DOI: 10.1128/genomeA.00615-18
Virginie Galeote, Frédéric Bigey, Hugo Devillers, Raúl A Ortiz-Merino, Sylvie Dequin, Kenneth H Wolfe, Cécile Neuvéglise

We report here the genome sequence of the ascomycetous yeast Torulaspora microellipsoides CLIB 830T A reference genome for this species, which has been found as a donor of genetic material in wine strains of Saccharomyces cerevisiae, will undoubtedly give clues to our understanding of horizontal transfer mechanisms between species in the wine environment.

我们在此报道子囊酵母Torulaspora microellipsoides CLIB 830T的基因组序列,该物种的参考基因组已被发现是酿酒酵母(Saccharomyces cerevisiae)葡萄酒菌株遗传物质的供体,无疑将为我们理解葡萄酒环境中物种之间的水平转移机制提供线索。
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引用次数: 6
Draft Genome Sequence of Mycoplasma arginini Strain NGR_2017. 精氨酸支原体NGR_2017基因组序列草图
Pub Date : 2018-06-28 DOI: 10.1128/genomeA.00577-18
J A Adeniji, T O C Faleye, O M Adewumi, O A Olayinka, E Donbraye, B Oluremi, U E George, O A Arowolo, E C Omoruyi, M I Ifeorah, A Akande

We present the draft genome of Mycoplasma arginini strain NGR_2017. This strain was recovered in Nigeria from cell culture in 2017. The assembly contains 620,555 bp in 12 contigs. It contains 561 coding sequences, 34 RNAs (29 tRNAs, 4 rRNAs, and 1 transfer-messenger RNA [tmRNA]), and a >26-kb integrative and conjugative element.

我们展示了精氨酸支原体菌株NGR_2017的基因组草图。该菌株于2017年在尼日利亚从细胞培养中恢复。该组合在12个contigs中包含620,555 bp。它包含561个编码序列,34个RNA(29个trna, 4个RNAs和1个传递信使RNA [tmRNA])和一个>26 kb的整合和共轭元件。
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引用次数: 0
High-Quality Genome Sequence of the Root-Knot Nematode Meloidogyne arenaria Genotype A2-O. 根结线虫A2-O基因型的高质量基因组序列分析。
Pub Date : 2018-06-28 DOI: 10.1128/genomeA.00519-18
Kazuki Sato, Yasuhiro Kadota, Pamela Gan, Takahiro Bino, Taketo Uehara, Katsushi Yamaguchi, Yasunori Ichihashi, Noriko Maki, Hideaki Iwahori, Takamasa Suzuki, Shuji Shigenobu, Ken Shirasu

Root-knot nematodes (Meloidogyne spp.) cause serious damage to many crops globally. We report the high-quality genome sequence of Meloidogyne arenaria genotype A2-O. The genome assembly of M. arenaria A2-O is composed of 2,224 contigs with an N50 contig length of 204,551 bp and a total assembly length of 284.05 Mb.

根结线虫(Meloidogyne spp.)对全球许多作物造成严重危害。我们报道了高质量的沙螺根线虫A2-O基因型基因组序列。M. arenaria A2-O基因组组装由2224个contigs组成,N50 contigs长度为204551 bp,总组装长度为284.05 Mb。
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引用次数: 19
Complete Genome Sequence of Acinetobacter schindleri SGAir0122 Isolated from Singapore Air. 新加坡航空辛德勒不动杆菌SGAir0122的全基因组序列分析。
Pub Date : 2018-06-28 DOI: 10.1128/genomeA.00567-18
Carmon Kee, Ana Carolina M Junqueira, Akira Uchida, Rikky W Purbojati, James N I Houghton, Caroline Chénard, Anthony Wong, Megan E Clare, Kavita K Kushwaha, Deepa Panicker, Alexander Putra, Nicolas E Gaultier, Balakrishnan N V Premkrishnan, Cassie E Heinle, Vineeth Kodengil Vettath, Daniela I Drautz-Moses, Stephan C Schuster

Acinetobacter schindleri strain SGAir0122 was isolated from tropical air samples collected in Singapore. The prevalence of nosocomial infection caused by this Gram-negative bacterium indicates its clinical significance as an opportunistic human pathogen. Its complete genome consists of one chromosome of 3.105 Mb and a plasmid of 181 kb.

从新加坡采集的热带空气样本中分离到辛德勒不动杆菌SGAir0122。这种革兰氏阴性杆菌引起的医院感染的流行表明其作为机会性人类病原体的临床意义。其全基因组由一条3.105 Mb的染色体和一个181 kb的质粒组成。
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引用次数: 4
Draft Genome Sequences of Chryseobacterium lactis NCTC11390T Isolated from Milk, Chryseobacterium oncorhynchi 701B-08T from Rainbow Trout, and Chryseobacterium viscerum 687B-08T from Diseased Fish. 乳汁中乳酸黄杆菌NCTC11390T、虹鳟中oncorhynchi黄细菌701B-08T、病鱼中内脏黄细菌687B-08T的基因组序列绘制
Pub Date : 2018-06-28 DOI: 10.1128/genomeA.00628-18
Jin-Ju Jeong, Ye Ji Lee, Duleepa Pathiraja, Byeonghyeok Park, In-Geol Choi, Ki Deok Kim

The genus Chryseobacterium, belonging to the family Flavobacteriaceae, contains Gram-negative, yellow-pigmented, rod-shaped, and non-spore-forming bacterial species, which may be free living or parasitic. Here, we report draft genome sequences of type strains of three species of Chryseobacterium containing genes related to biological control and plant growth promotion.

黄杆菌属属于黄杆菌科,包含革兰氏阴性,黄色色素,杆状和不形成孢子的细菌种类,可能是自由生活或寄生的。在这里,我们报告了三种含有生物控制和促进植物生长相关基因的黄杆菌型菌株的基因组序列草图。
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引用次数: 6
Complete Genome Sequences of Four Salmonella enterica subsp. enterica Serovar Senftenberg and Montevideo Isolates Associated with a 2016 Multistate Outbreak in the United States. 四种肠沙门氏菌亚种的全基因组序列。Senftenberg和Montevideo分离菌与2016年美国多州爆发有关。
Pub Date : 2018-06-28 DOI: 10.1128/genomeA.00630-18
Julie Haendiges, Tyann Blessington, Jie Zheng, Gordon Davidson, Jesse D Miller, Maria Hoffmann

A multistate outbreak of 11 Salmonella infections linked to pistachio nuts occurred in 2016. In this announcement, we report the complete genome sequences of four Salmonella enterica subsp. enterica serovar Senftenberg and S. enterica subsp. enterica serovar Montevideo isolates from pistachios collected during the 2016 outbreak investigation.

2016年,美国多个州爆发了11起与开心果有关的沙门氏菌感染疫情。在这一公告中,我们报告了四个肠沙门氏菌亚种的全基因组序列。Senftenberg肠球菌和肠球菌亚种。从2016年疫情调查期间收集的开心果中分离出蒙得维的亚血清型肠球菌。
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引用次数: 6
Draft Genome Sequences of Two Novel Cellulolytic Streptomyces Strains Isolated from South African Rhizosphere Soil. 从南非根际土壤分离的两株新型纤维素降解链霉菌的基因组序列草图。
Pub Date : 2018-06-28 DOI: 10.1128/genomeA.00632-18
Mobolaji F Adegboye, Briallen Lobb, Olubukola O Babalola, Andrew C Doxey, Kesen Ma

We report here the draft genome sequences of two novel strains of Streptomyces (NWU339 and NWU49) isolated from South African rhizosphere soils. Both strains were found to possess strong cellulolytic activity and contain numerous putative cellulase genes. Both genomes possess benzoate degradation pathways, while NWU49 contains the genomic potential for enediyne biosynthesis.

本文报道了从南非根际土壤中分离的两株链霉菌(NWU339和NWU49)的基因组序列草图。这两种菌株都具有很强的纤维素水解活性,并含有大量的纤维素酶基因。这两个基因组都具有苯甲酸酯降解途径,而NWU49具有基因组内烯二炔生物合成的潜力。
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引用次数: 5
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Genome Announcements
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