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Exploring shared biomarkers and shared pathways in insomnia and atherosclerosis using integrated bioinformatics analysis. 利用综合生物信息学分析探索失眠和动脉粥样硬化中的共享生物标志物和共享途径。
IF 3.5 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-10-08 eCollection Date: 2024-01-01 DOI: 10.3389/fnmol.2024.1477903
Qichong Yang, Juncheng Liu, Tingting Zhang, Tingting Zhu, Siyu Yao, Rongzi Wang, Wenjuan Wang, Haliminai Dilimulati, Junbo Ge, Songtao An

Background: Insomnia (ISM) is one of the non-traditional drivers of atherosclerosis (AS) and an important risk factor for AS-related cardiovascular disease. Our study aimed to explore the shared pathways and diagnostic biomarkers of ISM-related AS using integrated bioinformatics analysis.

Methods: We download the datasets from the Gene Expression Omnibus database and the GeneCards database. Weighted gene co-expression network analysis and gene differential expression analysis were applied to screen the AS-related gene set. The shared genes of ISM and AS were obtained by intersecting with ISM-related genes. Subsequently, candidate diagnostic biomarkers were identified by constructing protein-protein interaction networks and machine learning algorithms, and a nomogram was constructed. Moreover, to explore potential mechanisms, a comprehensive analysis of shared genes was carried out, including enrichment analysis, protein interactions, immune cell infiltration, and single-cell sequencing analysis.

Results: We successfully screened 61 genes shared by ISM and AS, of which 3 genes (IL10RA, CCR1, and SPI1) were identified as diagnostic biomarkers. A nomogram with excellent predictive value was constructed (the area under curve of the model constructed by the biomarkers was 0.931, and the validation set was 0.745). In addition, the shared genes were mainly enriched in immune and inflammatory response regulation pathways. The biomarkers were associated with a variety of immune cells, especially myeloid immune cells.

Conclusion: We constructed a diagnostic nomogram based on IL10RA, CCR1, and SPI1 and explored the inflammatory-immune mechanisms, which indicated new insights for early diagnosis and treatment of ISM-related AS.

背景:失眠(ISM)是动脉粥样硬化(AS)的非传统驱动因素之一,也是AS相关心血管疾病的重要危险因素。我们的研究旨在利用综合生物信息学分析探索与失眠相关的强直性脊柱炎的共享途径和诊断生物标志物:方法:我们从基因表达总库(Gene Expression Omnibus)数据库和基因卡片(GeneCards)数据库下载数据集。方法:我们从基因表达总库(Gene Expression Omnibus)和基因卡片(GeneCards)数据库中下载数据集,应用加权基因共表达网络分析和基因差异表达分析法筛选强直性脊柱炎相关基因。通过与ISM相关基因的交叉,得到ISM和AS的共有基因。随后,通过构建蛋白质-蛋白质相互作用网络和机器学习算法,确定了候选诊断生物标志物,并构建了提名图。此外,为了探索潜在的机制,我们还对共有基因进行了综合分析,包括富集分析、蛋白质相互作用、免疫细胞浸润和单细胞测序分析:结果:我们成功筛选出61个ISM和AS共有基因,其中3个基因(IL10RA、CCR1和SPI1)被确定为诊断生物标志物。研究还构建了一个具有极高预测价值的提名图(由生物标志物构建的模型的曲线下面积为 0.931,验证集为 0.745)。此外,共享基因主要富集在免疫和炎症反应调节通路中。这些生物标志物与多种免疫细胞有关,尤其是髓系免疫细胞:我们构建了基于 IL10RA、CCR1 和 SPI1 的诊断提名图,并探索了炎症-免疫机制,为 ISM 相关强直性脊柱炎的早期诊断和治疗提供了新的思路。
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引用次数: 0
Cellular signaling pathways in the nervous system activated by various mechanical and electromagnetic stimuli. 神经系统中由各种机械和电磁刺激激活的细胞信号通路。
IF 3.5 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-10-04 eCollection Date: 2024-01-01 DOI: 10.3389/fnmol.2024.1427070
Youngjae Ryu, Aboubacar Wague, Xuhui Liu, Brian T Feeley, Adam R Ferguson, Kazuhito Morioka

Mechanical stimuli, such as stretch, shear stress, or compression, activate a range of biomolecular responses through cellular mechanotransduction. In the nervous system, studies on mechanical stress have highlighted key pathophysiological mechanisms underlying traumatic injury and neurodegenerative diseases. However, the biomolecular pathways triggered by mechanical stimuli in the nervous system has not been fully explored, especially compared to other body systems. This gap in knowledge may be due to the wide variety of methods and definitions used in research. Additionally, as mechanical stimulation techniques such as ultrasound and electromagnetic stimulation are increasingly utilized in psychological and neurorehabilitation treatments, it is vital to understand the underlying biological mechanisms in order to develop accurate pathophysiological models and enhance therapeutic interventions. This review aims to summarize the cellular signaling pathways activated by various mechanical and electromagnetic stimuli with a particular focus on the mammalian nervous system. Furthermore, we briefly discuss potential cellular mechanosensors involved in these processes.

拉伸、剪切应力或压缩等机械刺激可通过细胞的机械传导激活一系列生物分子反应。在神经系统中,对机械应力的研究突出了创伤性损伤和神经退行性疾病的关键病理生理机制。然而,神经系统中机械刺激引发的生物分子途径尚未得到充分探索,尤其是与其他身体系统相比。造成这一知识空白的原因可能是研究中使用的方法和定义多种多样。此外,随着超声波和电磁刺激等机械刺激技术越来越多地用于心理和神经康复治疗,了解其潜在的生物机制对于建立准确的病理生理学模型和加强治疗干预至关重要。本综述旨在总结各种机械和电磁刺激激活的细胞信号通路,尤其关注哺乳动物的神经系统。此外,我们还简要讨论了参与这些过程的潜在细胞机械传感器。
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引用次数: 0
A review of the pathogenesis of epilepsy based on the microbiota-gut-brain-axis theory. 基于微生物群-肠-脑-轴理论的癫痫发病机制综述。
IF 3.5 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-10-03 eCollection Date: 2024-01-01 DOI: 10.3389/fnmol.2024.1454780
Wentao Yang, Hua Cui, Chaojie Wang, Xuan Wang, Ciai Yan, Weiping Cheng

The pathogenesis of epilepsy is related to the microbiota-gut-brain axis, but the mechanism has not been clarified. The microbiota-gut-brain axis is divided into the microbiota-gut-brain axis (upward pathways) and the brain-gut-microbiota axis (downward pathways) according to the direction of conduction. Gut microorganisms are involved in pathological and physiological processes in the human body and participate in epileptogenesis through neurological, immunological, endocrine, and metabolic pathways, as well as through the gut barrier and blood brain barrier mediated upward pathways. After epilepsy, the downward pathway mediated by the HPA axis and autonomic nerves triggers "leaky brain "and "leaky gut," resulting in the formation of microbial structures and enterobacterial metabolites associated with epileptogenicity, re-initiating seizures via the upward pathway. Characteristic changes in microbial and metabolic pathways in the gut of epileptic patients provide new targets for clinical prevention and treatment of epilepsy through the upward pathway. Based on these changes, this review further redescribes the pathogenesis of epilepsy and provides a new direction for its prevention and treatment.

癫痫的发病机制与微生物群-肠-脑轴有关,但其机制尚未明确。微生物群-肠-脑轴按传导方向分为微生物群-肠-脑轴(上行通路)和脑-肠-微生物群轴(下行通路)。肠道微生物参与人体的病理和生理过程,通过神经、免疫、内分泌、代谢等途径,以及肠道屏障和血脑屏障介导的上行途径参与癫痫的发生。癫痫发作后,由 HPA 轴和自主神经介导的下行途径会引发 "漏脑 "和 "漏肠",从而形成与致痫性相关的微生物结构和肠道细菌代谢物,通过上行途径再次引发癫痫发作。癫痫患者肠道中微生物和代谢途径的特征性变化为临床通过上行途径预防和治疗癫痫提供了新的靶点。基于这些变化,本综述进一步重新描述了癫痫的发病机制,并为癫痫的预防和治疗提供了新的方向。
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引用次数: 0
Molecular determinants of resurgent sodium currents mediated by Navβ4 peptide and A-type FHFs. 由 Navβ4 肽和 A 型 FHFs 介导的钠离子电流恢复的分子决定因素
IF 3.5 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-10-02 eCollection Date: 2024-01-01 DOI: 10.3389/fnmol.2024.1433981
Yucheng Xiao, Yanling Pan, Jingyu Xiao, Theodore R Cummins

Introduction: Resurgent current (INaR ) generated by voltage-gated sodium channels (VGSCs) plays an essential role in maintaining high-frequency firing of many neurons and contributes to disease pathophysiology such as epilepsy and painful disorders. Targeting INaR may present a highly promising strategy in the treatment of these diseases. Navβ4 and A-type fibroblast growth factor homologous factors (FHFs) have been identified as two classes of important INaR mediators; however, their receptor sites in VGSCs remain unknown, which hinders the development of novel agents to effectively target INaR .

Methods: Navβ4 and FHF4A can mediate INaR generation through the amino acid segment located in their C-terminus and N-terminus, respectively. We mainly employed site-directed mutagenesis, chimera construction and whole-cell patch-clamp recording to explore the receptor sites of Navβ4 peptide and FHF4A in Nav1.7 and Nav1.8.

Results: We show that the receptor of Navβ4-peptide involves four residues, N395, N945, F1737 and Y1744, in Nav1.7 DI-S6, DII-S6, and DIV-S6. We show that A-type FHFs generating INaR depends on the segment located at the very beginning, not at the distal end, of the FHF4 N-terminus domain. We show that the receptor site of A-type FHFs also resides in VGSC inner pore region. We further show that an asparagine at DIIS6, N891 in Nav1.8, is a major determinant of INaR generated by A-type FHFs in VGSCs.

Discussion: Cryo-EM structures reveal that the side chains of the critical residues project into the VGSC channel pore. Our findings provide additional evidence that Navβ4 peptide and A-type FHFs function as open-channel pore blockers and highlight channel inner pore region as a hotspot for development of novel agents targeting INaR .

导言:电压门控钠通道(VGSCs)产生的恢复电流(INaR)在维持许多神经元的高频发射方面发挥着重要作用,并对癫痫和疼痛等疾病的病理生理学起着重要作用。以 INaR 为靶点可能是治疗这些疾病的一种极具前景的策略。Navβ4和A型成纤维细胞生长因子同源因子(FHFs)已被确定为两类重要的INaR介质;然而,它们在VGSCs中的受体位点仍然未知,这阻碍了有效靶向INaR的新型药物的开发:Navβ4 和 FHF4A 可分别通过其 C 端和 N 端的氨基酸段介导 INaR 的产生。我们主要采用定点突变、嵌合体构建和全细胞膜片钳记录等方法探讨了 Nav1.7 和 Nav1.8 中 Navβ4 肽和 FHF4A 的受体位点:我们发现 Navβ4 肽的受体涉及 Nav1.7 DI-S6、DII-S6 和 DIV-S6 中的 N395、N945、F1737 和 Y1744 四个残基。我们的研究表明,A 型 FHFs 产生 INaR 依赖于位于 FHF4 N 端结构域最开始的部分,而不是远端的部分。我们发现 A 型 FHFs 的受体位点也位于 VGSC 内孔区域。我们进一步表明,DIIS6(Nav1.8中的N891)上的天冬酰胺是A型FHFs在VGSCs中产生INaR的主要决定因素:低温电子显微镜结构显示,关键残基的侧链伸入 VGSC 通道孔。我们的发现提供了更多证据,证明 Navβ4 肽和 A 型 FHFs 具有开放通道孔阻滞剂的功能,并强调通道内孔区域是开发靶向 INaR 的新型药物的热点区域。
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引用次数: 0
Risk factors for poor prognosis in patients with zoster-associated neuralgia who underwent interventional pain management. 接受介入疼痛治疗的带状疱疹相关神经痛患者预后不良的风险因素。
IF 3.5 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-10-02 eCollection Date: 2024-01-01 DOI: 10.3389/fnmol.2024.1393219
Junpeng Yuan, Youjia Yu, Hong Liu, Huichan Xu, Yan Li, Xiaohong Jin

Background: Zoster-associated neuralgia (ZAN) is recognized as a challenging neuralgia that often leads to poor prognosis in patients receiving interventional pain management. Identifying risk factors early can enable clinicians to develop personalized treatment plans; however, research in this area is limited.

Methods: We retrospectively screened all patients with ZAN who received interventional therapy in the Pain Department of Soochow University First Affiliated Hospital from January 1, 2022 to August 31, 2023. Data on patient demographics, medical history, neutrophil-to-lymphocyte ratio (NLR), clinical scoring, and treatment methods were collected. Interventional therapy included short-term nerve electrical stimulation (st-NES), pulsed radiofrequency (PRF) and radiofrequency thermocoagulation (RF-TC). Patients were categorized into poor prognosis and control groups based on outcomes 3 months post-discharge. Multivariate logistic regression was used to identify risk factors for poor prognosis.

Results: The final analysis included 282 patients. The rate of poor prognosis was 32.6% (92/282). Multivariate logistic regression analysis revealed that age ≥ 65 years (odds ratio, 2.985; 95% confidence interval, 1.449-6.148; p = 0.003), disease duration >3 months (odds ratio, 3.135; 95% confidence interval, 1.685-5.832; p < 0.001), head and face pain (odds ratio, 3.140; 95% confidence interval, 1.557-6.330; p = 0.001), use of immunosuppressants (odds ratio, 2.737; 95% confidence interval, 1.168-6.416; p = 0.021), higher NLR (odds ratio, 1.454; 95% confidence interval, 1.233-1.715; p < 0.001), PRF (st-NES as reference) (odds ratio, 2.324; 95% confidence interval, 1.116-4.844; p = 0.024) and RF-TC (st-NES as reference) (odds ratio, 5.028; 95% confidence interval, 2.139-11.820; p < 0.001) were found to be independent risk factors for poor prognosis in patients with ZAN who underwent interventional pain management.

Conclusion: Age ≥ 65 years (odds ratio, 2.985; 95% confidence interval, 1.449-6.148; p = 0.003), disease duration >3 months (odds ratio, 3.135; 95% confidence interval, 1.685-5.832; p < 0.001), head and face pain (odds ratio, 3.140; 95% confidence interval, 1.557-6.330; p = 0.001), immunosuppressants use (odds ratio, 2.737; 95% confidence interval, 1.168-6.416; p = 0.021), higher NLR (odds ratio, 1.454; 95% confidence interval, 1.233-1.715; p < 0.001), PRF (odds ratio, 2.324; 95% confidence interval, 1.116-4.844; p = 0.024) and RF-TC (odds ratio, 5.028; 95% confidence interval, 2.139-11.820; p < 0.001) were identified as independent risk factors for poor prognosis in patients with ZAN who underwent interventional pain management.

背景:带状疱疹相关神经痛(ZAN)被认为是一种具有挑战性的神经痛,通常会导致接受介入疼痛治疗的患者预后不良。早期识别风险因素可帮助临床医生制定个性化的治疗方案,但这方面的研究还很有限:我们回顾性地筛选了 2022 年 1 月 1 日至 2023 年 8 月 31 日期间在苏州大学附属第一医院疼痛科接受介入治疗的所有 ZAN 患者。收集了患者的人口统计学、病史、中性粒细胞与淋巴细胞比值(NLR)、临床评分和治疗方法等数据。介入治疗包括短期神经电刺激(st-NES)、脉冲射频(PRF)和射频热凝(RF-TC)。根据出院后 3 个月的结果,将患者分为预后不良组和对照组。多变量逻辑回归用于确定预后不良的风险因素:最终分析包括 282 名患者。预后不良率为 32.6%(92/282)。多变量逻辑回归分析显示,年龄≥65 岁(几率比,2.985;95% 置信区间,1.449-6.148;P = 0.003)、病程>3 个月(几率比,3.135;95% 置信区间,1.685-5.832;P = 0.001)、使用免疫抑制剂(几率比,2.737;95% 置信区间,1.168-6.416;P = 0.021)、较高的 NLR(几率比,1.454;95% 置信区间,1.233-1.715;P = 0.024)和 RF-TC(以 st-NES 为参照)(几率比,5.028;95% 置信区间,2.139-11.820;P 结论:年龄≥65 岁(几率比,2.737;95% 置信区间,1.168-6.416;P = 0.021年龄≥65 岁(几率比,2.985;95% 置信区间,1.449-6.148;P = 0.003)、病程>3 个月(几率比,3.135;95% 置信区间,1.685-5.832;P = 0.001)、使用免疫抑制剂(几率比,2.737;95% 置信区间,1.168-6.416;P = 0.021)、较高的 NLR(几率比,1.454;95% 置信区间,1.233-1.715;P P = 0.024)和 RF-TC(几率比,5.028;95% 置信区间,2.139-11.820;P
{"title":"Risk factors for poor prognosis in patients with zoster-associated neuralgia who underwent interventional pain management.","authors":"Junpeng Yuan, Youjia Yu, Hong Liu, Huichan Xu, Yan Li, Xiaohong Jin","doi":"10.3389/fnmol.2024.1393219","DOIUrl":"https://doi.org/10.3389/fnmol.2024.1393219","url":null,"abstract":"<p><strong>Background: </strong>Zoster-associated neuralgia (ZAN) is recognized as a challenging neuralgia that often leads to poor prognosis in patients receiving interventional pain management. Identifying risk factors early can enable clinicians to develop personalized treatment plans; however, research in this area is limited.</p><p><strong>Methods: </strong>We retrospectively screened all patients with ZAN who received interventional therapy in the Pain Department of Soochow University First Affiliated Hospital from January 1, 2022 to August 31, 2023. Data on patient demographics, medical history, neutrophil-to-lymphocyte ratio (NLR), clinical scoring, and treatment methods were collected. Interventional therapy included short-term nerve electrical stimulation (st-NES), pulsed radiofrequency (PRF) and radiofrequency thermocoagulation (RF-TC). Patients were categorized into poor prognosis and control groups based on outcomes 3 months post-discharge. Multivariate logistic regression was used to identify risk factors for poor prognosis.</p><p><strong>Results: </strong>The final analysis included 282 patients. The rate of poor prognosis was 32.6% (92/282). Multivariate logistic regression analysis revealed that age ≥ 65 years (odds ratio, 2.985; 95% confidence interval, 1.449-6.148; <i>p</i> = 0.003), disease duration >3 months (odds ratio, 3.135; 95% confidence interval, 1.685-5.832; <i>p</i> < 0.001), head and face pain (odds ratio, 3.140; 95% confidence interval, 1.557-6.330; <i>p</i> = 0.001), use of immunosuppressants (odds ratio, 2.737; 95% confidence interval, 1.168-6.416; <i>p</i> = 0.021), higher NLR (odds ratio, 1.454; 95% confidence interval, 1.233-1.715; <i>p</i> < 0.001), PRF (st-NES as reference) (odds ratio, 2.324; 95% confidence interval, 1.116-4.844; <i>p</i> = 0.024) and RF-TC (st-NES as reference) (odds ratio, 5.028; 95% confidence interval, 2.139-11.820; <i>p</i> < 0.001) were found to be independent risk factors for poor prognosis in patients with ZAN who underwent interventional pain management.</p><p><strong>Conclusion: </strong>Age ≥ 65 years (odds ratio, 2.985; 95% confidence interval, 1.449-6.148; <i>p</i> = 0.003), disease duration >3 months (odds ratio, 3.135; 95% confidence interval, 1.685-5.832; <i>p</i> < 0.001), head and face pain (odds ratio, 3.140; 95% confidence interval, 1.557-6.330; <i>p</i> = 0.001), immunosuppressants use (odds ratio, 2.737; 95% confidence interval, 1.168-6.416; <i>p</i> = 0.021), higher NLR (odds ratio, 1.454; 95% confidence interval, 1.233-1.715; <i>p</i> < 0.001), PRF (odds ratio, 2.324; 95% confidence interval, 1.116-4.844; <i>p</i> = 0.024) and RF-TC (odds ratio, 5.028; 95% confidence interval, 2.139-11.820; <i>p</i> < 0.001) were identified as independent risk factors for poor prognosis in patients with ZAN who underwent interventional pain management.</p>","PeriodicalId":12630,"journal":{"name":"Frontiers in Molecular Neuroscience","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11480953/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142463023","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Functions of TRPs in retinal tissue in physiological and pathological conditions. 生理和病理条件下视网膜组织中 TRPs 的功能。
IF 3.5 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-09-25 eCollection Date: 2024-01-01 DOI: 10.3389/fnmol.2024.1459083
Thaianne Hanah Oliveira do Nascimento, Danniel Pereira-Figueiredo, Louise Veroneze, Amanda Alves Nascimento, Francesco De Logu, Romina Nassini, Paula Campello-Costa, Adriana da Cunha Faria-Melibeu, Daniel Souza Monteiro de Araújo, Karin Costa Calaza

The Transient Receptor Potential (TRP) constitutes a family of channels subdivided into seven subfamilies: Ankyrin (TRPA), Canonical (TRPC), Melastatin (TRPM), Mucolipin (TRPML), no-mechano-potential C (TRPN), Polycystic (TRPP), and Vanilloid (TRPV). Although they are structurally similar to one another, the peculiarities of each subfamily are key to the response to stimuli and the signaling pathway that each one triggers. TRPs are non-selective cation channels, most of which are permeable to Ca2+, which is a well-established second messenger that modulates several intracellular signaling pathways and is involved in physiological and pathological conditions in various cell types. TRPs depolarize excitable cells by increasing the influx of Ca2+, Na+, and other cations. Most TRP families are activated by temperature variations, membrane stretching, or chemical agents and, therefore, are defined as polymodal channels. All TPRs are expressed, at some level, in the central nervous system (CNS) and ocular-related structures, such as the retina and optic nerve (ON), except the TRPP in the ON. TRPC, TRPM, TRPV, and TRPML are found in the retinal pigmented cells, whereas only TRPA1 and TRPM are detected in the uvea. Accordingly, several studies have focused on the search to unravel the role of TRPs in physiological and pathological conditions related to the eyes. Thus, this review aims to shed light on endogenous and exogenous modulators, triggered cell signaling pathways, and localization and roles of each subfamily of TRP channels in physiological and pathological conditions in the retina, optic nerve, and retinal pigmented epithelium of vertebrates.

瞬态受体电位(TRP)是一个通道家族,细分为七个亚家族:Ankyrin (TRPA)、Canonical (TRPC)、Melastatin (TRPM)、Mucolipin (TRPML)、no-mechano-potential C (TRPN)、Polycystic (TRPP) 和 Vanilloid (TRPV)。虽然它们在结构上彼此相似,但每个亚家族的特殊性是它们对刺激做出反应和触发信号通路的关键。TRPs是非选择性阳离子通道,其中大多数对Ca2+具有通透性,而Ca2+是一种公认的第二信使,可调节多种细胞内信号通路,并参与各类细胞的生理和病理状态。TRPs 通过增加 Ca2+、Na+ 和其他阳离子的流入,使可兴奋细胞去极化。大多数 TRP 家族都能被温度变化、膜伸展或化学试剂激活,因此被定义为多模式通道。除了在视网膜和视神经(ON)中的 TRPP 外,所有 TRP 在中枢神经系统(CNS)和眼部相关结构(如视网膜和视神经)中都有一定程度的表达。视网膜色素细胞中存在 TRPC、TRPM、TRPV 和 TRPML,而葡萄膜中只检测到 TRPA1 和 TRPM。因此,一些研究集中于揭示 TRPs 在与眼睛有关的生理和病理状况中的作用。因此,本综述旨在阐明脊椎动物视网膜、视神经和视网膜色素上皮中的内源性和外源性调节剂、触发的细胞信号传导途径以及各 TRP 通道亚家族在生理和病理情况下的定位和作用。
{"title":"Functions of TRPs in retinal tissue in physiological and pathological conditions.","authors":"Thaianne Hanah Oliveira do Nascimento, Danniel Pereira-Figueiredo, Louise Veroneze, Amanda Alves Nascimento, Francesco De Logu, Romina Nassini, Paula Campello-Costa, Adriana da Cunha Faria-Melibeu, Daniel Souza Monteiro de Araújo, Karin Costa Calaza","doi":"10.3389/fnmol.2024.1459083","DOIUrl":"10.3389/fnmol.2024.1459083","url":null,"abstract":"<p><p>The Transient Receptor Potential (TRP) constitutes a family of channels subdivided into seven subfamilies: Ankyrin (TRPA), Canonical (TRPC), Melastatin (TRPM), Mucolipin (TRPML), no-mechano-potential C (TRPN), Polycystic (TRPP), and Vanilloid (TRPV). Although they are structurally similar to one another, the peculiarities of each subfamily are key to the response to stimuli and the signaling pathway that each one triggers. TRPs are non-selective cation channels, most of which are permeable to Ca<sup>2+</sup>, which is a well-established second messenger that modulates several intracellular signaling pathways and is involved in physiological and pathological conditions in various cell types. TRPs depolarize excitable cells by increasing the influx of Ca<sup>2+</sup>, Na<sup>+</sup>, and other cations. Most TRP families are activated by temperature variations, membrane stretching, or chemical agents and, therefore, are defined as polymodal channels. All TPRs are expressed, at some level, in the central nervous system (CNS) and ocular-related structures, such as the retina and optic nerve (ON), except the TRPP in the ON. TRPC, TRPM, TRPV, and TRPML are found in the retinal pigmented cells, whereas only TRPA1 and TRPM are detected in the uvea. Accordingly, several studies have focused on the search to unravel the role of TRPs in physiological and pathological conditions related to the eyes. Thus, this review aims to shed light on endogenous and exogenous modulators, triggered cell signaling pathways, and localization and roles of each subfamily of TRP channels in physiological and pathological conditions in the retina, optic nerve, and retinal pigmented epithelium of vertebrates.</p>","PeriodicalId":12630,"journal":{"name":"Frontiers in Molecular Neuroscience","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-09-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11461470/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142389759","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Further validation of the association between MAPT haplotype-tagging polymorphisms and Alzheimer's disease: neuropsychological tests, cerebrospinal fluid biomarkers, and APOE genotype. 进一步验证 MAPT 单倍型标记多态性与阿尔茨海默病之间的关联:神经心理测试、脑脊液生物标志物和 APOE 基因型。
IF 3.5 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-09-25 eCollection Date: 2024-01-01 DOI: 10.3389/fnmol.2024.1456670
Mirjana Babić Leko, Ena Španić Popovački, Nanet Willumsen, Matea Nikolac Perković, Nikolina Pleić, Klara Zubčić, Lea Langer Horvat, Željka Vogrinc, Marina Boban, Fran Borovečki, Tatijana Zemunik, Rohan de Silva, Goran Šimić

Introduction: Genetic studies have shown that variants in the microtubule-associated protein tau (MAPT) gene, which encodes tau protein, can increase the risk for Alzheimer's disease (AD). Additionally, two haplotypes of the MAPT gene (H1 and H2) are associated with various neurodegenerative disorders, including AD. This study aimed to test the association of MAPT haplotypes (H1 and H2) and MAPT haplotype-tagging polymorphisms (rs1467967, rs242557, rs3785883, rs2471738, del-In9, rs7521) with AD.

Methods: The study included 964 individuals: 113 with AD, 53 with mild cognitive impairment (MCI), 54 with other dementias, and 744 healthy controls.

Results: The results showed that individuals carrying the A allele in the MAPT rs1467967 polymorphism, the GG genotype in the MAPT rs7521 polymorphism, and the G allele in the MAPT rs242557 polymorphism had worse performance on various neuropsychological tests. Carriers of the C allele in MAPT rs2471738 polymorphism and CC homozygotes also showed worse performance on neuropsychological tests and pathological levels of several cerebrospinal fluid (CSF) biomarkers. However, T allele carriers in the MAPT rs2471738 polymorphism were more represented among patients with dementia and apolipoprotein E (APOE) ɛ4 carriers. Carriers of the H2 MAPT haplotype had worse performance on various neuropsychological tests, consistent with our previous study, which associated the H2 MAPT haplotype with pathological levels of CSF AD biomarkers. Regarding the MAPT rs3785883 polymorphism, further research is needed since both the AA and GG genotypes were associated with pathological levels of CSF and plasma AD biomarkers.

Discussion: In conclusion, further genetic studies are needed to elucidate the role of MAPT haplotypes and MAPT haplotype-tagging polymorphisms in the development of AD.

简介遗传学研究表明,编码 tau 蛋白的微管相关蛋白 tau(MAPT)基因的变异可增加阿尔茨海默病(AD)的患病风险。此外,MAPT 基因的两种单倍型(H1 和 H2)与包括阿尔茨海默病在内的多种神经退行性疾病有关。本研究旨在检测 MAPT 单倍型(H1 和 H2)和 MAPT 单倍型标记多态性(rs1467967、rs242557、rs3785883、rs2471738、del-In9、rs7521)与 AD 的相关性:研究纳入了 964 人:方法:研究对象包括 964 人:113 名 AD 患者、53 名轻度认知障碍患者 (MCI)、54 名其他痴呆症患者和 744 名健康对照组:结果显示,MAPT rs1467967 多态性中的 A 等位基因、MAPT rs7521 多态性中的 GG 基因型和 MAPT rs242557 多态性中的 G 等位基因携带者在各种神经心理测试中的表现较差。MAPT rs2471738 多态性的 C 等位基因携带者和 CC 同卵双生者在神经心理测试中的表现也较差,几种脑脊液(CSF)生物标志物的病理水平也较低。然而,MAPT rs2471738 多态性的 T 等位基因携带者在痴呆症患者和载脂蛋白 E(APOE)ɛ4 携带者中的比例更高。H2 MAPT单倍型携带者在各种神经心理测试中的表现较差,这与我们之前的研究一致,该研究将H2 MAPT单倍型与CSF AD生物标志物的病理水平相关联。关于MAPT rs3785883多态性,由于AA和GG基因型均与CSF和血浆AD生物标志物的病理水平相关,因此还需要进一步研究:总之,要阐明MAPT单倍型和MAPT单倍型标记多态性在AD发病中的作用,还需要进一步的遗传学研究。
{"title":"Further validation of the association between <i>MAPT</i> haplotype-tagging polymorphisms and Alzheimer's disease: neuropsychological tests, cerebrospinal fluid biomarkers, and <i>APOE</i> genotype.","authors":"Mirjana Babić Leko, Ena Španić Popovački, Nanet Willumsen, Matea Nikolac Perković, Nikolina Pleić, Klara Zubčić, Lea Langer Horvat, Željka Vogrinc, Marina Boban, Fran Borovečki, Tatijana Zemunik, Rohan de Silva, Goran Šimić","doi":"10.3389/fnmol.2024.1456670","DOIUrl":"10.3389/fnmol.2024.1456670","url":null,"abstract":"<p><strong>Introduction: </strong>Genetic studies have shown that variants in the microtubule-associated protein tau (<i>MAPT</i>) gene, which encodes tau protein, can increase the risk for Alzheimer's disease (AD). Additionally, two haplotypes of the <i>MAPT</i> gene (H1 and H2) are associated with various neurodegenerative disorders, including AD. This study aimed to test the association of <i>MAPT</i> haplotypes (H1 and H2) and <i>MAPT</i> haplotype-tagging polymorphisms (rs1467967, rs242557, rs3785883, rs2471738, del-In9, rs7521) with AD.</p><p><strong>Methods: </strong>The study included 964 individuals: 113 with AD, 53 with mild cognitive impairment (MCI), 54 with other dementias, and 744 healthy controls.</p><p><strong>Results: </strong>The results showed that individuals carrying the A allele in the <i>MAPT</i> rs1467967 polymorphism, the GG genotype in the <i>MAPT</i> rs7521 polymorphism, and the G allele in the <i>MAPT</i> rs242557 polymorphism had worse performance on various neuropsychological tests. Carriers of the C allele in <i>MAPT</i> rs2471738 polymorphism and CC homozygotes also showed worse performance on neuropsychological tests and pathological levels of several cerebrospinal fluid (CSF) biomarkers. However, T allele carriers in the <i>MAPT</i> rs2471738 polymorphism were more represented among patients with dementia and apolipoprotein E (<i>APOE</i>) ɛ4 carriers. Carriers of the H2 <i>MAPT</i> haplotype had worse performance on various neuropsychological tests, consistent with our previous study, which associated the H2 <i>MAPT</i> haplotype with pathological levels of CSF AD biomarkers. Regarding the <i>MAPT</i> rs3785883 polymorphism, further research is needed since both the AA and GG genotypes were associated with pathological levels of CSF and plasma AD biomarkers.</p><p><strong>Discussion: </strong>In conclusion, further genetic studies are needed to elucidate the role of <i>MAPT</i> haplotypes and <i>MAPT</i> haplotype-tagging polymorphisms in the development of AD.</p>","PeriodicalId":12630,"journal":{"name":"Frontiers in Molecular Neuroscience","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-09-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11461444/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142389760","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The complexities of salt taste reception: insights into the role of TMC4 in chloride taste detection. 盐味接收的复杂性:洞察 TMC4 在氯化物味觉检测中的作用。
IF 3.5 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-09-25 eCollection Date: 2024-01-01 DOI: 10.3389/fnmol.2024.1468438
Yoichi Kasahara, Masataka Narukawa, Yoshikazu Saito, Keiko Abe, Tomiko Asakura

Although salt is an essential substance vital to life, excessive salt intake could cause various health issues. Therefore, new technologies and strategies should be developed to reduce salt intake without compromising taste. However, the underlying physiological mechanisms of salt taste reception is complex and not completely understood. Sodium chloride is a typical salty substance. It is widely believed that only sodium is important for the generation of salty taste. On the other hand, from a psychophysical perspective, the importance of chloride in salty taste has been indicated. Thus, understanding the mechanisms of both sodium- and chloride-tastes generation is necessary to completely comprehended the fundamentals of salt taste reception. However, the mechanism for detecting chloride taste has remained unclear for many years. Recently, we have identified transmembrane channel-like 4 (TMC4) as the first molecule that mediates the reception of chloride taste. TMC4 functions as a voltage-dependent chloride channel and plays an important role in the reception of the chloride taste by detecting chloride ions. In this mini-review, we first introduce the known reception mechanism of salty taste, and then discuss the roles of TMC4 in the salt taste reception. The finding of TMC4 may serve as a basis for developing new technologies and formulating strategies to reduce salt intake without compromising taste.

虽然盐是生命中不可或缺的重要物质,但摄入过多的盐会导致各种健康问题。因此,应开发新的技术和策略,在不影响口味的前提下减少盐的摄入量。然而,人们对盐味接收的基本生理机制十分复杂,尚未完全了解。氯化钠是一种典型的咸味物质。人们普遍认为,只有钠才是产生咸味的重要因素。另一方面,从心理物理的角度来看,氯化物在咸味中的重要性已得到证实。因此,要完全理解盐味接收的基本原理,就必须同时了解钠味和氯味的产生机制。然而,多年来氯化物味的检测机制仍不清楚。最近,我们发现跨膜通道样 4(TMC4)是第一个介导氯味接收的分子。TMC4 作为一种电压依赖性氯离子通道,通过检测氯离子在接收氯味的过程中发挥着重要作用。在这篇微型综述中,我们首先介绍了已知的咸味接收机制,然后讨论了 TMC4 在咸味接收中的作用。TMC4 的发现可作为开发新技术和制定策略的基础,从而在不影响口味的情况下减少盐的摄入量。
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引用次数: 0
A synonymous mutation of rs1137070 cause the mice Maoa gene transcription and translation to decrease rs1137070的同义突变导致小鼠Maoa基因转录和翻译减少
IF 4.8 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-09-18 DOI: 10.3389/fnmol.2024.1406708
Kai Xin Li, Lei Fan, Hongjuan Wang, Yushan Tian, Sen Zhang, Qingyuan Hu, Fanglin Liu, Huan Chen, Hongwei Hou
The Monoamine Oxidase-A (MAOA) EcoRV polymorphism (rs1137070) is a unique synonymous mutation (c.1409 T &gt; C) within the MAOA gene, which plays a crucial role in Maoa gene expression and function. This study aimed to explore the relationship between the mouse Maoa rs1137070 genotype and differences in MAOA gene expression. Mice carrying the CC genotype of rs1137070 exhibited a significantly lower Maoa expression level, with an odds ratio of 2.44 compared to the T carriers. Moreover, the wild-type TT genotype of MAOA demonstrated elevated mRNA expression and a longer half-life. We also delved into the significant expression and structural disparities among genotypes. Furthermore, it was evident that different aspartic acid synonymous codons within Maoa influenced both MAOA expression and enzyme activity, highlighting the association between rs1137070 and MAOA. To substantiate these findings, a dual-luciferase reporter assay confirmed that GAC was more efficient than GAT binding. Conversely, the synonymous mutation altered Maoa gene expression in individual mice. An RNA pull-down assay suggested that this alteration could impact the interaction with RNA-binding proteins. In summary, our results illustrate that synonymous mutations can indeed regulate the downregulation of gene expression, leading to changes in MAOA function and their potential association with neurological-related diseases.
单胺氧化酶-A(MAOA)EcoRV多态性(rs1137070)是MAOA基因中一个独特的同义突变(c.1409 T&gt;C),在Maoa基因表达和功能中起着至关重要的作用。本研究旨在探讨小鼠 Maoa rs1137070 基因型与 MAOA 基因表达差异之间的关系。携带rs1137070的CC基因型小鼠的Maoa表达水平明显较低,与T型携带者相比,几率为2.44。此外,MAOA 野生型 TT 基因型的 mRNA 表达量升高,半衰期延长。我们还深入研究了不同基因型在表达和结构上的显著差异。此外,Maoa 中不同的天冬氨酸同义密码子显然会影响 MAOA 的表达和酶活性,这凸显了 rs1137070 与 MAOA 之间的关联。为了证实这些发现,双荧光素酶报告实验证实 GAC 比 GAT 结合更有效。相反,同义突变改变了个体小鼠的 Maoa 基因表达。一项 RNA 下拉实验表明,这种改变可能会影响与 RNA 结合蛋白的相互作用。总之,我们的研究结果表明,同义突变确实可以调控基因表达的下调,从而导致 MAOA 功能的改变及其与神经相关疾病的潜在联系。
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引用次数: 0
RNA in axons, dendrites, synapses and beyond 轴突、树突、突触及其他部位的 RNA
IF 4.8 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-09-18 DOI: 10.3389/fnmol.2024.1397378
Richard Taylor, Nikolas Nikolaou
In neurons, a diverse range of coding and non-coding RNAs localize to axons, dendrites, and synapses, where they facilitate rapid responses to local needs, such as axon and dendrite extension and branching, synapse formation, and synaptic plasticity. Here, we review the extent of our current understanding of RNA subclass diversity in these functionally demanding subcellular compartments. We discuss the similarities and differences identified between axonal, dendritic and synaptic local transcriptomes, and discuss the reported and hypothesized fates and functions of localized RNAs. Furthermore, we outline the RNA composition of exosomes that bud off from neurites, and their implications for the biology of neighboring cells. Finally, we highlight recent advances in third-generation sequencing technologies that will likely provide transformative insights into splice isoform and RNA modification diversity in local transcriptomes.
在神经元中,多种编码和非编码 RNA 定位于轴突、树突和突触,它们有助于对轴突和树突的延伸和分支、突触形成和突触可塑性等局部需求做出快速反应。在这里,我们回顾了目前我们对这些功能要求极高的亚细胞区室中 RNA 亚类多样性的了解程度。我们讨论了轴突、树突和突触局部转录组之间的异同,并讨论了已报道和假设的局部 RNA 的命运和功能。此外,我们还概述了从神经元萌发的外泌体的 RNA 组成及其对邻近细胞生物学的影响。最后,我们重点介绍了第三代测序技术的最新进展,这些技术很可能为深入了解局部转录组中剪接同工酶和 RNA 修饰的多样性提供变革性的启示。
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引用次数: 0
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Frontiers in Molecular Neuroscience
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