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AAV library screening identifies novel vector for efficient transduction of human aorta AAV文库筛选为人类主动脉高效转导找到了新的载体。
IF 4.6 3区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-18 DOI: 10.1038/s41434-024-00511-8
Lena C. Schröder, Leonard Hüttermann, Anca Kliesow Remes, Jakob C. Voran, Susanne Hille, Wiebke Sommer, Georg Lutter, Gregor Warnecke, Derk Frank, Dennis Schade, Oliver J. Müller
Targeted gene delivery to vascular smooth muscle cells (VSMCs) could prevent or improve a variety of diseases affecting the vasculature and particularly the aorta. Thus, we aimed to develop a delivery vector that efficiently targets VSMCs. We selected engineered adeno-associated virus (AAV) capsids from a random AAV capsid library and tested the top enriched motifs in parallel screening through individual barcoding. This approach allowed us to distinguish capsids that only transduce cells based on genomic DNA (gDNA) from those also mediating transgene expression based on transcribed cDNA reads. After three rounds of selection on primary murine VSMCs (mVSMCs), we identified a novel targeting motif (RFTEKPA) that significantly improved transduction and gene expression efficiency over AAV9-wild type (WT) and increased expression in mVSMCs by 70% compared to the previously identified SLRSPPS peptide. Further analysis showed that the novel motif also improved expression in human aortic smooth muscle cells (HAoSMCs) and human aortic tissue ex vivo up to threefold compared to SLRSPPS and approximately 70-fold to AAV9-WT. This high cross-species transduction efficiency makes the novel capsid motif a potential candidate for future clinical application in vascular diseases.
靶向基因传递到血管平滑肌细胞(VSMCs)可以预防或改善多种影响血管系统特别是主动脉的疾病。因此,我们的目标是开发一种有效靶向vsmc的递送载体。我们从随机的AAV衣壳库中选择工程化腺相关病毒(AAV)衣壳,并通过单独的条形码平行筛选测试了最富集的基序。这种方法使我们能够区分仅基于基因组DNA (gDNA)转导细胞的衣壳和基于转录的cDNA reads介导转基因表达的衣壳。在对原代小鼠VSMCs (mVSMCs)进行三轮筛选后,我们发现了一个新的靶向基序(RFTEKPA),该基序显著提高了aav9野生型(WT)的转导和基因表达效率,与先前鉴定的SLRSPPS肽相比,在mVSMCs中的表达增加了70%。进一步分析表明,与SLRSPPS相比,新基序在人主动脉平滑肌细胞(HAoSMCs)和人主动脉组织中的体外表达提高了3倍,比AAV9-WT提高了约70倍。这种高的跨物种转导效率使新的衣壳基序成为未来血管疾病临床应用的潜在候选者。
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引用次数: 0
Intracisternal vs intraventricular injection of AAV1 result in comparable, widespread transduction of the dog brain 胸腔内注射 AAV1 与脑室内注射 AAV1 在狗脑中产生的广泛转导效果相当。
IF 4.5 3区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-09 DOI: 10.1038/s41434-024-00510-9
Jacqueline E. Hunter, Charles H. Vite, Caitlyn M. Molony, Patricia A. O’Donnell, John H. Wolfe
Widespread distribution of transduced brain cells following delivery of AAV vectors into the cerebrospinal fluid (CSF) of the cisterna magna (CM) has been demonstrated in large animal brains. In humans, intraventricular injection is preferred to intracisternal injection for CSF delivery due to the risk of brain stem injury. One study in the dog reported adverse reactions to AAV vectors expressing GFP injected into the lateral ventricle but not when injected into the CM. In contrast, AAV expressing mammalian genes in diseased animals have not triggered adverse responses since many genetic diseases also have compromised immune systems. Differences in circulation of CSF from each site could potentially affect vector spread within the brain, but a direct comparison has not been made using both a mammalian gene and immunologically normal animals. In this study we evaluated the dopamine-2-receptor (D2R) variant D2R80A, which is inactivated for intracellular signaling and has been used as a reporter gene in large animal brains. No adverse reactions to the D2R80A gene were observed from either injection route in normal dogs and both routes resulted in comparable distribution of D2R80A within the brain.
在大型动物大脑中,AAV载体进入大池脑脊液(CSF)后,转导的脑细胞广泛分布。在人类中,由于脑干损伤的风险,脑室内注射比脑室内注射更适合脑脊液输送。一项对狗的研究报告了将表达GFP的AAV载体注射到侧脑室而不是注射到CM时的不良反应。相比之下,在患病动物中表达哺乳动物基因的AAV并没有引发不良反应,因为许多遗传性疾病也会损害免疫系统。每个部位脑脊液循环的差异可能会潜在地影响病媒在脑内的传播,但尚未使用哺乳动物基因和免疫正常的动物进行直接比较。在这项研究中,我们评估了多巴胺-2受体(D2R)变体D2R80A,它在细胞内信号传导中失活,并在大型动物大脑中被用作报告基因。在正常犬中,两种注射方式均未观察到对D2R80A基因的不良反应,两种注射方式均导致D2R80A在脑内的分布相当。
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引用次数: 0
Unlocking patient access to gene therapy: five key practices 开启患者获得基因治疗的途径:五个关键实践。
IF 4.6 3区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-06 DOI: 10.1038/s41434-024-00509-2
Tay Salimullah, Burcu Kazazoglu Taylor, Madeleine Zerbato
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引用次数: 0
Placental nanoparticle-mediated IGF1 gene therapy corrects fetal growth restriction in a guinea pig model 胎盘纳米颗粒介导的IGF1基因治疗在豚鼠模型中纠正胎儿生长限制。
IF 4.5 3区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-04 DOI: 10.1038/s41434-024-00508-3
Baylea N. Davenport, Rebecca L. Wilson, Alyssa A. Williams, Helen N. Jones
Fetal growth restriction (FGR) caused by placental insufficiency is a major contributor to neonatal morbidity and mortality. There is currently no in utero treatment for placental insufficiency or FGR. The placenta serves as the vital communication, supply, exchange, and defense organ for the developing fetus and offers an excellent opportunity for therapeutic interventions. Here we show efficacy of repeated treatments of trophoblast-specific human insulin-like 1 growth factor (IGF1) gene therapy delivered in a non-viral, polymer nanoparticle to the placenta for the treatment of FGR. Using a guinea pig maternal nutrient restriction model (70% food intake) of FGR, nanoparticle-mediated IGF1 treatment was delivered to the placenta via ultrasound guidance across the second half of pregnancy, after establishment of FGR. This treatment resulted in correction of fetal weight in MNR + IGF1 animals compared to sham treated controls on an ad libitum diet, increased fetal blood glucose and decreased fetal blood cortisol levels compared to sham treated MNR, and showed no negative maternal side-effects. Overall, we show a therapy capable of positively impacting the entire pregnancy environment: maternal, placental, and fetal. This combined with our previous studies using this therapy at mid pregnancy in the guinea pig and in two different mouse model and three different human in vitro/ex vivo models, demonstrate the plausibility of this therapy for future human translation. Our overall goal is to improve health outcomes of neonates and decrease numerous morbidities associated with the developmental origins of disease.
胎盘功能不全引起的胎儿生长受限(FGR)是新生儿发病率和死亡率的主要原因。目前尚无子宫内治疗胎盘功能不全或FGR的方法。胎盘是胎儿发育过程中至关重要的沟通、供应、交换和防御器官,为治疗干预提供了极好的机会。在这里,我们展示了滋养层细胞特异性人胰岛素样1生长因子(IGF1)基因疗法在非病毒聚合物纳米颗粒中传递到胎盘中治疗FGR的效果。采用FGR母鼠营养限制模型(70%的食物摄入量),在FGR建立后的妊娠后半段,通过超声引导将纳米颗粒介导的IGF1治疗递送到胎盘。与随意饮食的假对照组相比,这种治疗导致MNR + IGF1动物的胎儿体重得到纠正,与假处理的MNR相比,胎儿血糖升高,胎儿血液皮质醇水平降低,并且没有显示出负面的母体副作用。总的来说,我们展示了一种能够对整个妊娠环境产生积极影响的疗法:母体、胎盘和胎儿。结合我们之前在妊娠中期的豚鼠、两种不同的小鼠模型和三种不同的人类体外/离体模型中使用这种疗法的研究,证明了这种疗法在未来人类翻译中的可行性。我们的总体目标是改善新生儿的健康状况,减少与疾病发育起源相关的众多发病率。
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引用次数: 0
Adeno-associated virus serotype 2 capsids with proteolytic cuts by trypsin remain intact and potent 腺相关病毒血清2型衣壳被胰蛋白酶蛋白水解切割后保持完整和有效。
IF 4.6 3区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-29 DOI: 10.1038/s41434-024-00507-4
Yu Zhou, Tina Sach, Joseph Y. Ong, Ting-An Lim, Zoltan Berecz, Colin Deniston, Goran Milicic, Connie Y. Tsai, Taryn Kandepalli, Derek J. Langeslay, Qiang Qin
Recombinant adeno-associated viral (AAV) vectors have emerged as prominent gene delivery vehicles for gene therapy. In the journey of an AAV vector, AAV vectors can be exposed to different proteolytic environments inside the production cells, during the cell lysis step, within the endosome, and finally inside the cell nucleus. The stability of a modified AAV serotype 2 (AAV2) capsid was evaluated via a proteolytic approach using trypsin and other proteases and both denaturing and non-denaturing analytical methods. Trypsin digestion of the AAV2 capsids resulted in clips of the capsid proteins at the C-terminus as confirmed by denaturing methods including SDS-PAGE, CE-SDS, Western blot, and RPLC-MS. It was found that the AAV2 capsid with clips not only remains structurally intact, as confirmed by non-denaturing methods including SEC, thermostability testing, and cryo-EM, but also remains potent, as confirmed in a cell-based potency assay. This finding reveals that AAV2 capsid with proteolytic cuts remains intact and potent since the icosahedral three-dimensional structural arrangement of AAV capsid proteins can protect the clipped fragment from being released from the capsid, such that the AAV capsid remains intact allowing for the functionality to be maintained to deliver the DNA in the host cell. Evaluation of AAV stability using a proteolytic approach and multiple denaturing and non-denaturing analytical methods can provide valuable information for engineering AAV capsids to develop AAV-based gene therapy.
重组腺相关病毒(AAV)载体已成为基因治疗中重要的基因传递载体。在AAV载体的传播过程中,AAV载体可以暴露于生产细胞内、细胞裂解阶段、核内体内以及细胞核内的不同蛋白水解环境中。利用胰蛋白酶和其他蛋白酶以及变性和非变性分析方法,对改良的AAV血清型2 (AAV2)衣壳的稳定性进行了评价。经SDS-PAGE、CE-SDS、Western blot和hplc - ms等变性方法证实,胰蛋白酶消化AAV2衣壳后,在c端产生衣壳蛋白片段。研究发现,带有片段的AAV2衣壳不仅在结构上保持完整,通过非变性方法(包括SEC、热稳定性测试和冷冻电镜)证实了这一点,而且在基于细胞的效价分析中也证实了这一点。这一发现表明,由于AAV衣壳蛋白的二十面体三维结构排列可以保护被剪切的片段不被释放,因此AAV衣壳保持完整,从而维持在宿主细胞中传递DNA的功能,因此具有蛋白水解切割的AAV2衣壳保持完整和有效。利用蛋白水解方法和多种变性和非变性分析方法评价AAV的稳定性,可以为工程AAV衣壳开发基于AAV的基因治疗提供有价值的信息。
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引用次数: 0
Prime editing: therapeutic advances and mechanistic insights 主要编辑:治疗进展和机制见解。
IF 4.6 3区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-28 DOI: 10.1038/s41434-024-00499-1
Joss B. Murray, Patrick T. Harrison, Janine Scholefield
We are often confronted with a simple question, “which gene editing technique is the best?”; the simple answer is “there isn’t one”. In 2021, a year after prime editing first made its mark, we evaluated the landscape of this potentially transformative advance in genome engineering towards getting treatments to the clinic [1]. Nearly 20% of the papers we cited were still in pre-print at the time which serves to indicate how early-stage the knowledge base was at that time. Now, three years later, we take a look at the landscape and ask what has been learnt to ensure this tech is broadly accessible, highlighting some key advances, especially those that push this towards the clinic. A big part of the appeal of prime editing is its ability to precisely edit DNA without double stranded breaks, and to install any of the 12 possible single-nucleotide conversion events as well as small insertions and/or deletions, or essentially any combination thereof. Over the last few decades, other transformative and Nobel prize-winning technologies that rely on Watson-Crick base-pairing such as PCR, site-directed mutagenesis, RNA interference, and one might say, “classic” CRISPR, were swiftly adopted across labs around the world because of the speed with which mechanistic rules governing their efficiency were determined. Whilst this perspective focuses on the context of gene therapy applications of prime editing, we also further look at the recent studies which have increased our understanding of the mechanism of PEs and simultaneously improved the efficiency and diversity of the PE toolbox.
我们经常会遇到一个简单的问题,“哪种基因编辑技术是最好的?”简单的回答是“没有”。2021年,也就是初始编辑首次取得成功的一年后,我们评估了基因组工程在将治疗方法推向临床方面的潜在变革性进展的前景。我们引用的近20%的论文当时仍处于预印本阶段,这表明当时的知识库处于多么早期的阶段。现在,三年过去了,我们回顾了这一现状,并询问了我们从中学到了什么,以确保这项技术的广泛应用,并强调了一些关键的进步,特别是那些将这项技术推向临床的进展。引体编辑的一大吸引力在于它能够在没有双链断裂的情况下精确编辑DNA,并能够安装12种可能的单核苷酸转换事件中的任何一种,以及小的插入和/或缺失,或者本质上是它们的任何组合。在过去的几十年里,其他依靠沃森-克里克碱基配对的变革性技术和获得诺贝尔奖的技术,如聚合酶链反应(PCR)、定点诱变(site-directed mutagenesis)、RNA干扰(RNA interference),以及人们可能会说的“经典”CRISPR,都被世界各地的实验室迅速采用,因为控制它们效率的机制规则被确定的速度很快。虽然这一观点侧重于引体编辑基因治疗应用的背景,但我们也进一步研究了最近的研究,这些研究增加了我们对PEs机制的理解,同时提高了PE工具箱的效率和多样性。
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引用次数: 0
Gene-based therapy for the treatment of spinal muscular atrophy types 1 and 2 : a systematic review and meta-analysis 治疗脊髓性肌萎缩症 1 型和 2 型的基因疗法:系统综述和荟萃分析。
IF 4.5 3区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-27 DOI: 10.1038/s41434-024-00503-8
Bunchai Chongmelaxme, Varalee Yodsurang, Ponlawat Vichayachaipat, Thanate Srimatimanon, Oranee Sanmaneechai
Despite numerous studies identifying the advantages of therapies for spinal muscular atrophy (SMA), healthcare professionals encounter obstacles in determining the most effective treatment. This study aimed to investigate the effects of gene-based therapy for SMA. A systematic search was conducted from inception to May 2024 across databases, and all studies assessing the effects of gene-based therapy on patients with SMA types 1 and 2 were included. The outcomes measured were survival, the need for ventilatory support, improvements in motor function, and the occurrence of adverse drug reactions. Meta-analyses were performed using a random-effects model. A total of 57 studies (n = 3418) were included, and the meta-analyses revealed that onasemnogene abeparvovec showed the highest survival rate (95% [95% CI: 88, 100]), followed by risdiplam (86% [95% CI: 76, 94]) and nusinersen (60% [95% CI: 50, 70]). The number of patients needing ventilatory support was reduced after treatment with onasemnogene abeparvovec (risk ratio = 0·10 [95% CI: 0·02, 0·53]). Onasemnogene abeparvovec and risdiplam had similar proportions of patients with improvements in the Children’s Hospital of Philadelphia Infant Test of Neuromuscular Disorders score of ≥4 points (92% [95% CI: 62, 100] vs 90% [95% CI: 77, 97]). In contrast, nusinersen had the smallest improvement (74% [95% CI: 66, 81]). The most frequently observed adverse drug reactions were headaches, vomiting, and gastrointestinal disorders. Gene-based therapy benefits patient survival and improves motor function. Onasemnogene abeparvovec and risdiplam appear highly effective, whereas nusinersen exhibits moderate effectiveness.
尽管有大量研究证实了脊髓性肌萎缩症(SMA)疗法的优势,但医护人员在确定最有效的治疗方法时仍会遇到障碍。本研究旨在调查基于基因的疗法对 SMA 的治疗效果。从开始到2024年5月,我们在各数据库中进行了系统性检索,纳入了所有评估基因疗法对1型和2型SMA患者影响的研究。研究结果包括存活率、呼吸支持需求、运动功能改善情况以及药物不良反应发生率。元分析采用随机效应模型进行。荟萃分析显示,onasemnogene abeparvovec的存活率最高(95% [95% CI:88, 100]),其次是risdiplam(86% [95% CI:76, 94])和nusinersen(60% [95% CI:50, 70])。使用onasemnogene abeparvovec治疗后,需要呼吸机支持的患者人数有所减少(风险比=0-10 [95% CI:0-02,0-53])。费城儿童医院婴儿神经肌肉障碍测试评分≥4分的患者比例与onasemnogene abeparvovec和risdiplam相似(92% [95% CI: 62, 100] vs 90% [95% CI: 77, 97])。相比之下,纽西奈森的改善幅度最小(74% [95% CI:66, 81])。最常见的药物不良反应是头痛、呕吐和胃肠功能紊乱。基于基因的疗法有利于患者存活并改善运动功能。Onasemnogene abeparvovec 和 risdiplam 显得非常有效,而 nusinersen 则表现出中等疗效。
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引用次数: 0
PCRX-201, a novel IL-1Ra gene therapy treatment approach for low back pain resulting from intervertebral disc degeneration PCRX-201 是一种新型 IL-1Ra 基因疗法,用于治疗椎间盘退变引起的腰背痛。
IF 4.6 3区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-21 DOI: 10.1038/s41434-024-00504-7
Joseph W. Snuggs, Rebecca K. Senter, Joshua P. Whitt, J. Derek Jackson, Christine L. Le Maitre
Low back pain is the leading cause of global disability with intervertebral disc (IVD) degeneration a major cause. However, no current treatments target the underlying pathophysiological causes. PCRX-201 presents a novel gene therapy approach that addresses this issue. PCRX-201 codes for interleukin-1 receptor antagonist, the signalling inhibitor of the pro-inflammatory cytokine interleukin-1, which orchestrates the catabolic degeneration of the IVD. Here, the ability of PCRX-201 to transduce human nucleus pulposus cells to increase IL-1Ra production was assessed together with effects on catabolic pathways. When transduced with PCRX-201, the production and release of IL-1Ra was increased in degenerate human nucleus pulposus cells and tissue. Whereas, the production of downstream proteins, including IL-1β, IL-6, MMP3, ADAMTS4 and VEGF were decreased in both cells and tissue, indicating a reduction in IL-1-induced catabolic signalling. Here, a novel gene therapy vector, PCRX-201, was shown to transduce degenerate NP cells and tissue, increasing the production of IL-1Ra. The increased IL-1Ra resulted in decreased production of catabolic cytokines, enzymes and angiogenic factors, whilst also increasing aggrecan expression. This demonstrates PCRX-201 enables the inhibition of IL-1-driven IVD degeneration. The ability of PCRX-201 to elicit anti-catabolic responses is promising and warrants further development to determine the efficacy of this exciting, novel gene therapy.
腰背痛是导致全球残疾的主要原因,而椎间盘(IVD)退化是主要原因之一。然而,目前还没有针对潜在病理生理原因的治疗方法。PCRX-201 提出了一种新型基因治疗方法来解决这一问题。PCRX-201 编码为白细胞介素-1 受体拮抗剂,它是促炎细胞因子白细胞介素-1 的信号抑制剂,而白细胞介素-1 会协调 IVD 的分解变性。本文评估了 PCRX-201 转导人髓核细胞以增加 IL-1Ra 生成的能力以及对分解代谢途径的影响。转导 PCRX-201 后,变性人髓核细胞和组织中 IL-1Ra 的产生和释放均有所增加。而在细胞和组织中,下游蛋白(包括IL-1β、IL-6、MMP3、ADAMTS4和VEGF)的产生均有所减少,这表明IL-1诱导的分解代谢信号有所减少。研究表明,新型基因治疗载体 PCRX-201 可转导变性 NP 细胞和组织,增加 IL-1Ra 的产生。IL-1Ra 的增加导致分解代谢细胞因子、酶和血管生成因子的产生减少,同时也增加了凝集素的表达。这表明 PCRX-201 能够抑制 IL-1 驱动的 IVD 退化。PCRX-201 引发抗分解代谢反应的能力令人充满希望,值得进一步开发,以确定这种令人兴奋的新型基因疗法的疗效。
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引用次数: 0
Genes for bad backs 导致背痛的基因
IF 4.6 3区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-20 DOI: 10.1038/s41434-024-00506-5
Christopher H. Evans
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引用次数: 0
Bridging gene therapy and next-generation vaccine technologies 连接基因治疗和新一代疫苗技术。
IF 4.6 3区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-18 DOI: 10.1038/s41434-024-00502-9
Kristie Bloom, Abdullah Ely, Mohube Betty Maepa, Patrick Arbuthnot
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引用次数: 0
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Gene Therapy
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