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Deleterious, protein-altering variants in GSPT2 are putatively associated with an X-linked neurodevelopmental disorder with intellectual disability, language impairment, autism, and epilepsy GSPT2中有害的、改变蛋白质的变异被认为与智力残疾、语言障碍、自闭症和癫痫等x连锁神经发育障碍有关。
IF 6.2 1区 医学 Q1 GENETICS & HEREDITY Pub Date : 2026-03-01 Epub Date: 2025-12-17 DOI: 10.1016/j.gim.2025.101668
Yuda Wei , Kai Liu , Changrui Mi , Jing Yu , Ruopeng Sun , Shengxing Miao , Haiqi Li , Huili Xue , Xiaxia Liu , Yanyan Hu , Yongzhen Qi , Jie Zhang , Lili Tong , Chen Zhao , Liangqian Jiang , Juan Teng , Xingzhu Geng , Chengcheng Gai , Hongyan Xu , Lin Li , Xiangyu Zhao

Purpose

Approximately 6% of individuals with neurodevelopmental disorders are predicted to be X-linked, and the GSPT2 gene, located at Xp11.22, has not yet been associated with any Mendelian disease.

Methods

To establish genotype-phenotype associations between GSPT2 and neurodevelopmental disorders, clinical investigations were performed in unrelated individuals, genomic and functional studies were conducted on the participants’ blood and heterologous cell system.

Results

We described 6 individuals from 6 unrelated families carrying hemizygous variants in GSPT2 with intellectual disability, delayed speech and language development, autism spectrum disorder, epilepsy, or abnormal fetal neurodevelopment. Structural molecular modeling revealed significant deleterious effects of the identified variants. GSPT2 is preferentially enriched in the brain and cerebellum compared with other tissues. GSPT2-deficient H4 neuroglioma cells slow down the proliferation and downregulate the expression of cell-cycle-related genes. Transcriptomics revealed that GABAergic and calcium-signaling-related genes were significantly downregulated in GSPT2-deficient cells. Consistent with the transcriptomic data, RT-PCR analysis verified the marked downregulation of critical genes (CACNA1B, etc) in GSPT2-knockout cells and further confirmed these findings with proteomic profiling.

Conclusion

Our data suggest a putative GSPT2-related X-linked neurodevelopmental disorders through dysregulation of cell-cycle progression and calcium/GABAergic signaling pathways.
目的:大约6%的神经发育障碍患者被预测为x连锁,而位于Xp11.22的GSPT2基因尚未与任何孟德尔疾病相关。方法:为建立GSPT2与神经发育障碍(ndd)之间的基因型-表型相关性,对无亲缘关系个体进行临床调查,并对参与者的血液和异源细胞系统进行基因组和功能研究。结果:我们描述了来自6个不相关家族的6个个体携带GSPT2半合子变异,并伴有ID、DSD、ASD、癫痫或胎儿神经发育异常。结构分子模型揭示了鉴定变异的显著有害效应。与其他组织相比,GSPT2优先富集于大脑和小脑。gspt2缺失的H4神经胶质瘤细胞增殖减慢,细胞周期相关基因表达下调。转录组学显示,gspt2缺陷细胞中gaba能和钙信号相关基因显著下调。与转录组学数据一致,RT-PCR分析证实了gspt2敲除细胞中关键基因(CACNA1B等)的显著下调,并通过蛋白质组学分析进一步证实了这些发现。结论:我们的数据表明,gspt2相关的x连锁ndd可能通过细胞周期进程和钙/ gaba能信号通路的失调而发生。
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引用次数: 0
Response to Deuitch et al 对Deuitch等人的回应。
IF 6.2 1区 医学 Q1 GENETICS & HEREDITY Pub Date : 2026-03-01 Epub Date: 2026-03-04 DOI: 10.1016/j.gim.2025.101657
Kristy Lee , Christa Lese Martin , David T. Miller
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引用次数: 0
Barriers and facilitators to implementing clinical genome-wide sequencing: A scoping review of the global landscape 实施临床全基因组测序的障碍和促进因素:对全球景观的范围审查。
IF 6.2 1区 医学 Q1 GENETICS & HEREDITY Pub Date : 2026-03-01 Epub Date: 2025-12-17 DOI: 10.1016/j.gim.2025.101665
Whiwon Lee , Joyce Yan , Katharine Fooks , Melanie Barwick , Mark Dobrow , Jan M. Friedman , Christian R. Marshall , Robin Z. Hayeems

Purpose

The global demand for clinical genome-wide sequencing (GWS) continues to grow. This study describes the global landscape of genetic service delivery and the barriers and facilitators to implementing clinical GWS.

Methods

A scoping review was conducted using MEDLINE and Embase (January 2009-July 2025) to identify studies related to genetic service delivery, exome and genome sequencing, and implementation.

Results

Ninety-six articles representing 35 countries were analyzed using the updated Consolidated Framework for Implementation Research. The most frequently reported barriers were within the outer setting: insufficient Local Conditions (ie, genetics workforce shortage; 54/96, 56%), limited Financing (29/96, 30%), and lack of national Policies and Laws (regulations) for genomic testing (20/96, 21%). Negative Local Attitudes about genomics were reported as a barrier in 11 South American, Middle Eastern, Asian, and African countries. Identified outer setting facilitators included Partnerships and Connections between interested parties (eg, government, academic institutions; 14/96, 15%) and dedicated Funding for national genomics initiatives (6/96, 6%).

Conclusion

This scoping review identified common barriers to implementing GWS across countries with varying capacities for delivering these services. Findings may help countries to anticipate barriers, leverage facilitators, and develop strategies for implementing genomic testing and services.
目的:临床全基因组测序(GWS)的全球需求持续增长。本研究描述了遗传服务提供的全球格局以及实施临床GWS的障碍和促进因素。方法:使用MEDLINE和Embase(2009年1月- 2025年7月)进行范围综述,以确定与遗传服务提供、外显子组和基因组测序及其实施相关的研究。结果:使用更新的实施研究综合框架对代表35个国家的96篇文章进行了分析。最常见的障碍是外部环境:当地条件不足(即遗传学劳动力短缺;54/96,56%),资金有限(29/96,30%),以及缺乏基因组检测的国家政策和法律(法规)(20/96,21%)。据报道,在11个南美、中东、亚洲和非洲国家,当地对基因组学的消极态度是一个障碍。确定的外部环境促进因素包括利益相关方(如政府、学术机构;14/96,15%)之间的伙伴关系和联系,以及国家基因组计划的专门资助(6/96,6%)。结论:这次范围审查确定了在提供这些服务的能力不同的国家实施全球卫生服务的共同障碍。研究结果可能有助于各国预测障碍,利用促进因素,并制定实施基因组检测和服务的战略。
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引用次数: 0
Equity-focused implementation to enhance access to rare disease genomic research and understand diverse perspectives 以公平为重点的实施,以增加获得罕见病基因组研究的机会,并了解不同的观点。
IF 6.2 1区 医学 Q1 GENETICS & HEREDITY Pub Date : 2026-03-01 Epub Date: 2025-12-17 DOI: 10.1016/j.gim.2025.101667
Eva Martinez , Jillian Serrano , Siwaar Abouhala , Ashana Neale , Grace VanNoy , Heidi L. Rehm , Melanie O’Leary , Anne O’Donnell-Luria , Monica H. Wojcik

Purpose

Rare disease genomic research suffers from a lack of diverse participation. We therefore implemented and evaluated a multi-faceted intervention to support recruitment of populations previously underrepresented by race, ethnicity, primary language, household income, education level, or rural residence to the Rare Genomes Project.

Methods

For a prospective cohort, we tracked completion of our enrollment processes supported by interventions including clinician engagement, language support, proactive and flexible participant contact, and use of mobile phlebotomy. Participants were offered a survey upon enrollment to assess values and priorities.

Results

In total, 161 of 195 (83%) participants completed enrollment. High-yield interventions included clinician referral forms and increased staff assistance. Genome sequencing data have been generated for 133 participants, with a diagnosis found for 17 (13%) and candidate for 23 (17%) thus far. Most diagnosed participants (13/17, 76%) benefited from clinician rather than self-referral. Perceived importance of a genetic diagnosis was ranked very/extremely high for 81 of 96 (84%) of participants. Spanish primary language was associated with higher perceived importance and high income with lower perceived importance, although only income remained significant in a multivariable model.

Conclusion

Overall, our equity-focused initiative enabled enrollment of participants from populations previously underrepresented in rare disease genomic research and offers insight into potential motivators.
目的:罕见病基因组研究缺乏多样化的参与。因此,我们实施并评估了一项多方面的干预措施,以支持招募以前在种族、民族、主要语言、家庭收入、教育水平或农村居住地方面代表性不足的人群参加罕见基因组计划(RGP)。方法:对于一个前瞻性队列,我们通过临床医生参与、语言支持、主动灵活的参与者接触和使用移动静脉切开术等干预措施跟踪完成我们的入组过程。参与者在入学时接受了一份调查,以评估价值观和优先事项。结果:161/195(83%)参与者完成入组。高产干预措施包括临床医生转诊表格和增加工作人员协助。到目前为止,已经为133名参与者生成了基因组测序数据,其中17名(13%)被诊断,23名(17%)被候选。大多数确诊的参与者(13/17,76%)受益于临床医生而不是自我转诊。81/96(84%)的参与者认为基因诊断的重要性非常/非常高。西班牙语主要语言与较高的感知重要性相关,高收入与较低的感知重要性相关,尽管在多变量模型中只有收入仍然显著。结论:总体而言,我们以股权为重点的倡议使以前在罕见疾病基因组研究中代表性不足的人群的参与者得以纳入,并提供了对潜在激励因素的见解。
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引用次数: 0
Correspondence on “ACMG SF v3.3 list for reporting of secondary findings in clinical exome and genome sequencing: A policy statement of the American College of Medical Genetics and Genomics (ACMG)” by Lee et al Lee等人关于“ACMG SF v3.3列表用于报告临床外显子组和基因组测序的次要发现:美国医学遗传学和基因组学学院(ACMG)的政策声明”的通信
IF 6.2 1区 医学 Q1 GENETICS & HEREDITY Pub Date : 2026-03-01 Epub Date: 2026-03-04 DOI: 10.1016/j.gim.2025.101656
Natalie T. Deuitch , Paul P. Liu , David J. Young , David Wu , Lucy A. Godley
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引用次数: 0
Evaluating pregnancy and neonatal outcomes in mothers with genetic disease using electronic health care records 利用电子医疗记录评估遗传疾病母亲的妊娠和新生儿结局。
IF 6.2 1区 医学 Q1 GENETICS & HEREDITY Pub Date : 2026-03-01 Epub Date: 2026-01-06 DOI: 10.1016/j.gim.2025.101681
Rory J. Tinker , Lucas D. Richter , Yutaka Furuta , Cathy Shyr , Sherwin M. Shirazi , Jennifer Sucre , Luke A. Gatta , John A. Phillips 3rd , Josh F. Peterson , Lisa Bastarache

Purpose

The effect of Mendelian disorders on pregnancy and neonatal outcomes is poorly understood because of their rarity and the challenge of compiling complete prenatal and postnatal records.

Methods

Using electronic health records from a single academic center, we developed a retrospective cohort of maternal-infant dyads. Cases were mothers with molecularly confirmed Mendelian disorders paired with live-born infants; controls had no documented genetic disease. Outcomes were evaluated overall, by organ system, and by individual disorder.

Results

The cohort included 58,912 dyads, 241 with genetic diagnoses and 58,671 controls. Although overall outcomes were generally favorable, mothers with genetic disorders had higher rates of cesarean delivery and neonatal intensive care unit admission, earlier gestational age, and lower Apgar scores. Neonatal risks were greatest among neurological and cardiovascular disorders. Known associations were replicated, including increased neonatal intensive care unit admission in 22q11.2 deletion syndrome, cesarean delivery in Turner syndrome, and gestational diabetes in cystic fibrosis. We also provided descriptive electronic-health-record-based case reports and case series for 35 disorders previously lacking published pregnancy outcome data.

Conclusion

This study identifies elevated perinatal risks in specific Mendelian disease groups and demonstrates how electronic-health-record-linked data can support prenatal counseling, risk stratification, and individualized care for individuals with genetic disorders.
目的:孟德尔障碍对妊娠和新生儿结局的影响尚不清楚,由于其罕见和编制完整的产前和产后记录的挑战。方法:使用来自单一学术中心的电子健康记录,我们建立了一个回顾性的母婴队列。病例是分子证实孟德尔疾病的母亲与活产婴儿配对;对照组没有记录的遗传疾病。通过器官系统和个体疾病对结果进行总体评估。结果:该队列包括58,912对,241例遗传诊断和58,671例对照。虽然总体结果总体上是有利的,但患有遗传性疾病的母亲剖宫产率和新生儿重症监护病房入院率较高,胎龄较早,Apgar评分较低。新生儿的神经和心血管疾病风险最大。已知的关联被重复,包括22q11.2缺失综合征的NICU入院增加,Turner综合征的剖宫产增加,囊性纤维化的妊娠糖尿病增加。我们还提供了描述性的基于电子病历的病例报告和35种疾病的病例系列,这些疾病以前缺乏公开的妊娠结局数据。结论:本研究确定了特定孟德尔疾病组的围产期风险升高,并展示了ehr相关数据如何支持产前咨询、风险分层和遗传疾病个体的个性化护理。
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引用次数: 0
Correspondence on “Sequencing and health data resource of children of African ancestry” 关于“非洲血统儿童的排序和健康数据资源”的通信。
IF 6.2 1区 医学 Q1 GENETICS & HEREDITY Pub Date : 2026-03-01 Epub Date: 2026-03-04 DOI: 10.1016/j.gim.2025.101663
Michael Allison , Terresa Adams , Jennifer Foster , Kathy Hale , Dominique Tapplar
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引用次数: 0
Consideration of inherited cancer risk on a continuum: An international and multidisciplinary perspective: A points to consider statement of the American College of Medical Genetics and Genomics (ACMG) 考虑连续体上的遗传癌症风险:一个国际和多学科的观点:美国医学遗传学和基因组学学院(ACMG)的声明。
IF 6.2 1区 医学 Q1 GENETICS & HEREDITY Pub Date : 2026-03-01 Epub Date: 2026-01-30 DOI: 10.1016/j.gim.2025.101659
Tuya Pal , Joseph Christopher , Esteban Astiazaran-Symonds , William D. Foulkes , Paul James , Susan Klugman , Allison Kurian , Julie Mak , Alvaro Monteiro , Mark Robson , Marc Tischkowitz , Douglas R. Stewart , Helen Hanson , ACMG Professional Practice and Guidelines Committee
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引用次数: 0
Real-world outcomes of vosoritide in achondroplasia: A systematic review and meta-analysis of multinational clinical evidence vosoritide治疗软骨发育不全的实际结果:一项对多国临床证据的系统回顾和荟萃分析。
IF 6.2 1区 医学 Q1 GENETICS & HEREDITY Pub Date : 2026-03-01 Epub Date: 2025-12-19 DOI: 10.1016/j.gim.2025.101670
Anna Luiza Braga Albuquerque , Maria Inez Dacoregio , Cainã Gonçalves Rodrigues , Débora Romeo Bertola , Paulo Victor Zattar Ribeiro

Purpose

Achondroplasia is the most common skeletal dysplasia, caused by gain-of-function variants in FGFR3, resulting in constitutive receptor activation and downstream inhibition of endochondral ossification. In 2021, the first targeted therapy, vosoritide, was approved in some countries after a landmark randomized trial. Although findings are promising, evidence is limited to modest-sized cohorts. To address this, we conducted a systematic review and meta-analysis of available vosoritide data.

Methods

A systematic search of PubMed, Cochrane, and Embase was conducted. Data were extracted according to Cochrane guidelines. Outcomes consistently reported were synthesized using R (v4.5) to generate forest plots.

Results

Ten studies were analyzed, encompassing 696 pediatric patients. Meta-analysis of single means showed that height z-score variation after 12 months of treatment was 0.32 (95% CI 0.25-0.40), annualized growth rate was 1.82 cm/year higher after treatment (95% CI 1.46-2.18), and the ratio between sitting height and height showed −0.0089 decrease (95% CI −0.0157 to −0.0020). Studies reported uniform profiles of adverse events, mostly limited to mild injection-site related issues and no serious complications.

Conclusion

This meta-analysis shows that real-world observational data on vosoritide in children with achondroplasia replicate clinical trial findings, with greater gains in linear growth and a similarly favorable safety profile.
目的:软骨发育不全是最常见的骨骼发育不良,由FGFR3的功能获得性变异引起,导致构成受体激活和软骨内成骨的下游抑制。2021年,在一项具有里程碑意义的随机试验之后,首个靶向治疗药物vosoritide在一些国家获得批准。虽然研究结果很有希望,但证据仅限于中等规模的队列。为了解决这个问题,我们对可用的vosoritide数据进行了系统回顾和荟萃分析。方法:对PubMed、Cochrane和Embase进行了系统检索。根据Cochrane指南提取数据。使用R (v4.5)对一致报告的结果进行综合,生成森林样地。结果:我们分析了10项研究,包括696名儿科患者。单均值荟萃分析显示,治疗12个月后的身高z-score变异为0.32 (95%CI 0.25 ~ 0.40),治疗后的年化增长率增加1.82 cm/年(95%CI 1.46 ~ 2.18),坐高与身高之比下降-0.0089 (95%CI -0.0157 ~ -0.0020)。研究报告了不良事件的统一概况,主要局限于轻微的注射部位相关问题,没有严重的并发症。结论:本荟萃分析显示,vosoritide在软骨发育不全儿童中的实际观察数据与临床试验结果一致,具有更大的线性增长和同样有利的安全性。
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引用次数: 0
Polygenic variants in DNA repair genes are associated with neurodevelopmental disorders, regression and increased burdens of somatic variants and short tandem repeat expansions DNA修复基因中的多基因变异与神经发育障碍、退化和体细胞变异负担增加以及短串联重复扩增有关。
IF 6.2 1区 医学 Q1 GENETICS & HEREDITY Pub Date : 2026-03-01 Epub Date: 2025-12-08 DOI: 10.1016/j.gim.2025.101661
Maria Cerminara , Giovanni Spirito , Luca Pandolfini , Silvia Boeri , Giulia Rosti , Margherita Mancardi , Livia Pisciotta , Marco Fontana , Alessandra Bianchi , Iris Chen , Loretta Ferrera , Francesco Caroli , Marco Di Duca , Andrea Cavalli , Maria Teresa Divizia , Elisa De Grandis , Silvia Casabona , Sara Trova , Diego Vozzi , Antonio Amoroso , Aldamaria Puliti

Purpose

Developmental regression, characterized by the loss of acquired milestones, occurs in some individuals with neurodevelopmental disorders (NDDs); yet, its molecular basis remains unclear. Studies suggest that DNA damage repair (DDR) genes, such as FAN1, may protect against neurological dysfunction by modulating the somatic stability of short tandem repeats (STRs). This study explores the contribution of DDR gene variants in NDD cases presenting with regression.

Methods

We analyzed 1087 NDD patients, focusing on those carrying variants in DDR genes and presenting regression. We assessed the sensitivity to DNA damage using mitomycin C on lymphoblastoid cells. Somatic variants and STR expansions were evaluated through high-depth short-read genome sequencing. To further investigate the pathogenetic role of STR expansions, we performed long-read genome sequencing on the most severely affected proband.

Results

Probands with regression carried multiple DDR gene variants, several within the Fanconi anemia pathway. Their lymphoblastoid cells showed increased sensitivity to mitomycin C-induced cytotoxicity compared with parental and control samples. Probands with severe phenotypes and regression exhibited an accumulation of somatic variants and STR instability, enriched in neurodevelopmental genes.

Conclusion

Our findings suggest that polygenic DDR gene variants may contribute to developmental regression in NDDs by promoting the accumulation of somatic variants and STR expansions.
目的:以丧失获得性里程碑为特征的发育倒退发生在一些神经发育障碍(ndd)患者中,但其分子基础尚不清楚。研究表明DNA损伤修复(DDR)基因,如FAN1,可能通过调节短串联重复序列(STRs)的体细胞稳定性来保护神经功能障碍。本研究探讨了DDR基因变异在表现为回归的NDD病例中的作用。方法:我们分析了1087例NDD患者,重点分析了携带DDR基因变异并出现回归的患者。我们用丝裂霉素C对淋巴母细胞样细胞进行DNA损伤敏感性评估。体细胞变异和STR扩增通过高深度短读基因组测序进行评估。为了进一步研究STR扩增的致病作用,我们对受影响最严重的先证子进行了长读基因组测序。结果:回归先显子携带多个DDR基因变异,其中几个在范可尼贫血途径内。与亲代和对照样本相比,它们的淋巴母细胞样细胞对丝裂霉素c诱导的细胞毒性表现出更高的敏感性。具有严重表型和退化的先证者表现出体细胞变异和STR不稳定的积累,富含神经发育基因。结论:我们的研究结果表明,多基因DDR基因变异可能通过促进体细胞变异的积累和STR扩展而促进ndd的发育倒退。
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引用次数: 0
期刊
Genetics in Medicine
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