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DNA fingerprinting study on the intraspecific variation and the origin of Prunus yedoensis (Someiyoshino). 李(Prunus yedoensis, Someiyoshino)种内变异及起源的DNA指纹图谱研究。
Pub Date : 1995-04-01 DOI: 10.1266/jjg.70.185
H Innan, R Terauchi, N T Miyashita, K Tsunewaki

In order to investigate the intraspecific variation of Prunus yedoensis (Someiyoshino) and interspecific relationship among P. yedoensis, P. lannesiana (Oshimazakura) and P. pendula (Edohigan), DNA fingerprinting study was conducted by using two different kinds of probes, M13 repeat sequence and (GACA)4 synthetic oligonucleotide. In this study, 68 plants of P. yedoensis grown in 46 prefectures in Japan were investigated. All the P. yedoensis individuals investigated showed the completely same banding pattern, indicating their clonal origin from a single plant. On the other hand, each of P. lannesiana and P. pendula individuals investigated showed a unique banding pattern, suggesting a considerable amount of genetic variation in these two species. About 90% of bands in DNA fingerprints of P. yedoensis were detected in either P. lannesiana or P. pendula. This result supports the hypothesis that P. yedoensis is an interspecific hybrid between P. lannesiana and P. pendula. From those results, it is concluded that P. yedoensis was produced only once through hybridization between P. lannesiana and P. pendula, and that this particular hybrid plant has been spread vegetatively all over Japan.

摘要为了研究紫李(Someiyoshino)种内变异及紫李(P. yedoensis)、紫李(P. lannesiana)和紫李(P. pendula)种间关系,采用M13重复序列和(GACA)4合成寡核苷酸两种探针进行了DNA指纹图谱研究。本研究以日本46个县的68株紫杉为研究对象。所有被调查的紫杉树个体显示出完全相同的条带模式,表明它们来自于同一株植物。另一方面,两种植物的遗传变异均表现出独特的条带模式,表明两种植物存在较大的遗传变异。约90%的yedoensis DNA指纹图谱在pnas和pnas中都能检测到。这一结果支持了yedoensis是P. lanesiana和P. pendula之间种间杂交的假设。根据这些结果,我们可以得出结论,紫杉是由紫杉和紫杉杂交产生的,并且这种特殊的杂交植物在日本各地都有植被分布。
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引用次数: 31
Theoretical analyses of chiasmata using a novel chiasma graph method applied to Chinese hamsters, mice, and dog. 用一种新的交叉图方法对中国仓鼠、小鼠和狗的交叉进行理论分析。
Pub Date : 1995-04-01 DOI: 10.1266/jjg.70.233
M Y Wada, H T Imai

Some basic concepts of chiasma (including chiasma distribution, chiasma frequency, interstitial and terminal chiasmata, and chiasma interference) are reexamined theoretically in the light of gene shuffling, and a new method for chiasma analysis termed the chiasma graph is proposed. Chiasma graphs are developed for three mammals with greatly different chromosome numbers: Chinese hamster (with n = 11), mice (n = 20), and a dog (n = 39). The results demonstrate that interstitial chiasmata can contribute both to gene shuffling and to the binding of bivalents, but that so-called terminal chiasmata are in fact mostly achiasmatic terminal associations, the main function of which is to bind bivalents. For this reason, terminal chiasmata should be excluded when chiasma frequency is estimated. It is also demonstrated that interstitial chiasmata distribute on bivalents randomly and uniformly, except at the centromere and telomere. Interference distance fluctuates almost randomly above a minimum value equivalent to about 1.8% of total bivalent length at diakinesis. These results indicate that chiasma formation in mammals is principally a random event. The demonstrated minimum interference distance seems consistent with the polymerization model for chiasma formation. Some cytological aspects of crossing-over are discussed with reference to the minimum interaction theory for eukaryotic chromosome evolution.

从基因变换的角度对交叉分布、交叉频率、间隙和末端交叉、交叉干扰等交叉的基本概念进行了理论分析,并提出了一种新的交叉分析方法——交叉图。对染色体数目差别很大的三种哺乳动物:中国仓鼠(n = 11)、小鼠(n = 20)和狗(n = 39),绘制了交叉图。结果表明,间质交叉在基因重组和二价结合中都有作用,但所谓的末端交叉实际上大多是非交叉的末端结合,其主要功能是结合二价。因此,在估计交叉频率时,应排除末端交叉。除了着丝粒和端粒外,间质交叉在二价体上的分布是随机而均匀的。干涉距离在最小值上几乎随机波动,该最小值约等于初始时总二价长度的1.8%。这些结果表明,在哺乳动物中交叉的形成主要是一个随机事件。所证明的最小干涉距离似乎与交叉形成的聚合模型一致。参考真核生物染色体进化的最小相互作用理论,讨论了交叉的细胞学方面的一些问题。
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引用次数: 6
Phenotypic and molecular characterization of croaker, a new mating behavior mutant of Drosophila melanogaster. 黑腹果蝇交配行为新突变体croaker的表型和分子特征。
Pub Date : 1995-02-01 DOI: 10.1266/jjg.70.103
T Yokokura, R Ueda, D Yamamoto

Mating of Drosophila melanogaster is a stereotypically patterned behavior consisting of a fixed sequence of actions that is primarily under genetic control. Although courtship can be easily monitored and quantified, little is known about its neural basis. To obtain a better understanding of cellular and molecular mechanisms underlying courtship, we have isolated mutants that disrupt specific aspects of mating behavior. The croaker mutant was isolated from approximately 1,000 lines harboring single P-element insertions by screening for aberrant courtship song: croaker males often generate polycyclic pulse song while most of the song pulses are monocyclic in the wild-type. The mutant is also defective in flight. Intracellular recordings of excitatory junction potentials from larval body wall muscles and Ca++ action potentials from adult indirect flight muscles demonstrated that neuromuscular transmission and Ca++ electrogenesis in the muscle fibers are not impaired by the croaker mutation. To define the croaker gene molecularly, genomic DNA surrounding the P-element insertion site was cloned by plasmid rescue and subsequent screening of a cosmid library. Northern blotting with the genomic DNA probes detected three transcripts in the wild-type, which were not expressed in the croaker mutant.

黑腹果蝇的交配是一种典型的模式行为,由一系列固定的行为组成,主要受基因控制。尽管求偶行为很容易被监测和量化,但人们对其神经基础知之甚少。为了更好地了解求爱的细胞和分子机制,我们分离出了破坏交配行为特定方面的突变体。通过筛选异常的求偶鸣声,从大约1000个含有单p元素插入的黄花鱼突变体中分离出黄花鱼突变体:雄性黄花鱼通常产生多环脉冲鸣声,而野生型黄花鱼的大多数鸣声脉冲是单环的。突变体在飞行方面也有缺陷。幼虫体壁肌的兴奋性连接电位和成虫间接飞行肌的Ca++动作电位的细胞内记录表明,神经肌肉传递和肌肉纤维中的Ca++电生成并未受到croaker突变的损害。为了从分子上确定黄花鱼基因,通过质粒抢救和随后的cosmid文库筛选克隆了p元素插入位点周围的基因组DNA。基因组DNA探针的Northern blotting检测到野生型中的三个转录本,而这些转录本在斑马鱼突变体中没有表达。
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引用次数: 25
New DNA data collected and processed at DNA Data Bank of Japan. 日本DNA数据库收集和处理的新DNA数据。
Pub Date : 1995-02-01
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引用次数: 0
A practical method for fission yeast transformation by electroporation. 一种实用的裂变酵母电穿孔转化方法。
Pub Date : 1995-02-01 DOI: 10.1266/jjg.70.1
J Ishiguro, W Kobayashi

High-voltage shock within a very short duration under the proper conditions causes cells to incorporate exogenous macromolecules. This technique, electroporation, has been widely used in recent years to transform many organisms. We determined optimum conditions for fission yeast transformation using this method. Of nineteen combinations of electric field strength and pulse time examined, 1.75 kV/0.2 cm, 4 msec pulse was found to provide approximately 4.0 x 10(5) transformants per micrograms of DNA. Other factors responsible for the transformation efficiency in fission yeast are also discussed.

在适当条件下,极短时间内的高压冲击可使细胞吸收外源性大分子。近年来,电穿孔技术已被广泛应用于许多生物的转化。我们用这种方法确定了裂变酵母转化的最佳条件。在19种电场强度和脉冲时间的组合中,发现1.75 kV/0.2 cm, 4 msec脉冲每微克DNA提供大约4.0 x 10(5)个变子。对影响裂变酵母转化效率的其他因素也进行了讨论。
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引用次数: 15
Deletion of the Wilson's disease gene in hereditary hepatitis LEC rats. 遗传性LEC型肝炎大鼠威尔逊氏病基因的缺失。
Pub Date : 1995-02-01 DOI: 10.1266/jjg.70.25
T Ono, R Fukumoto, Y Kondoh, M C Yoshida

LEC rats develop disorder of cooper metabolism and hepatitis similar to those of human Wilson's disease. We recently demonstrated that the gene responsible for hepatitis (hts) of LEC rats is homologous to Wilson's disease gene (WD). The present study showed a deletion of at least 90 base pair of WD cDNA in LEC rats, which corresponds to nucleotides 3981 to 4071 in human WD cDNA sequence. This deletion was linked with hepatic copper accumulation and hepatitis, and considered to be a primary mutation for hepatic disorder in the LEC rat. The WD gene was assigned to rat chromosome 16 at band q12.2-q12.4 by fluorescence in situ hybridization (FISH).

LEC大鼠出现铜代谢紊乱和肝炎,与人肝豆状核变性相似。我们最近证明,负责LEC大鼠肝炎(hts)的基因与威尔逊病基因(WD)同源。本研究发现LEC大鼠的WD cDNA缺失至少90个碱基对,与人类WD cDNA序列的核苷酸3981 ~ 4071相对应。这种缺失与肝铜积累和肝炎有关,被认为是LEC大鼠肝脏疾病的主要突变。通过荧光原位杂交(FISH)将WD基因定位到大鼠16号染色体q12.2-q12.4带。
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引用次数: 7
DNA fingerprinting of animal genomes by CA-repeat primed polymerase chain reaction. CA-repeat引物聚合酶链反应在动物基因组DNA指纹图谱中的应用。
Pub Date : 1995-02-01 DOI: 10.1266/jjg.70.75
Y Ishibashi, S Abe, M C Yoshida

CA-repeat primed polymerase chain reaction (CAP-PCR), using degenerate primers which anneal at the ends of (CA)n sequences in eukaryotic genomes, was attempted to assess its potential to monitor the genomic polymorphisms in various animals. Three mammalian, three avian, one fish and one insect species were examined and all showed primer-specific DNA fingerprints by CAP-PCR. Polymorphic bands observed in a laboratory-bred vole family were segregated in Mendelian manner. The present CAP-PCR DNA fingerprinting therefore is a simple and useful method for examining genomic variations in most animals without prerequisite knowledge of DNA sequences.

利用退化引物对真核生物基因组(CA)n序列末端进行退火,试图评估CA-repeat引物聚合酶链反应(CAP-PCR)在多种动物基因组多态性监测中的潜力。3种哺乳动物、3种鸟类、1种鱼类和1种昆虫均通过CAP-PCR显示了引物特异性DNA指纹图谱。在一个实验室饲养的田鼠家族中观察到的多态性条带以孟德尔方式分离。因此,目前的CAP-PCR DNA指纹是一种简单而有用的方法,可以在大多数动物中检测基因组变异,而不需要先决条件的DNA序列知识。
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引用次数: 7
Geographical distribution of the Hbb haplotypes in the Mus musculus subspecies in eastern Asia. 东亚小家鼠亚种Hbb单倍型的地理分布。
Pub Date : 1995-02-01 DOI: 10.1266/jjg.70.17
T Kawashima, N Miyashita, K Tsuchiya, H Li, F Wang, C H Wang, X L Wu, C Wang, M L Jin, X Q He

We surveyed the geographical distribution of Hbb haplotypes of the house mouse, Mus musculus, in the former USSR and the northern part of China. Mice with the w1 haplotype were distributed from the coastal area of the Black Sea to the Maritime Province of Siberia in the former USSR and in the area north of the Yangtze River in China. Mice with the p haplotype were found in the areas surrounding those populated with the w1 haplotype mice. In the Maritime Province and the southern part of Siberia, the d haplotype was predominant. The correlation between the geographical variation of the Hbb haplotypes and the distribution of the Mus musculus subspecies in the eastern part of the Eurasian Continent, is discussed.

我们调查了家鼠Hbb单倍型在前苏联和中国北部地区的地理分布。w1单倍型小鼠分布于黑海沿岸至前苏联西伯利亚沿海地区和中国长江以北地区。在w1单倍型小鼠周围的区域发现了p单倍型小鼠。在滨海省和西伯利亚南部以d单倍型为主。讨论了Hbb单倍型的地理变异与小家鼠亚种在欧亚大陆东部分布的相关性。
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引用次数: 9
Cytogenetical studies on the genus Oryza. XIV. Intergeneric hybridizations between tetraploid Oryza species and diploid Leersia species. 标题稻属植物的细胞遗传学研究。十四。四倍体水稻种与二倍体Leersia种的属间杂交。
Pub Date : 1995-02-01 DOI: 10.1266/jjg.70.47
T Katayama

Intergeneric hybrids involving Oryza punctata (2n = 48, BBCC) with Leersia tisseranti (2n = 24), O. punctata with L. perrieri (2n = 24), O. latifolia (2n = 48, CCDD) with L. tisseranti and O. latifolia with L. perrieri were produced at frequencies varying from 0.11% to 0.23% of the pollinated spikelets. Plant morphologies of the hybrids strongly resembled the tetraploid Oryza species. Five hybrids obtained from the four cross-combinations had the expected chromosome number of 2n = 36 (trihaploid) in the somatic cells. The average meiotic chromosome pairings per cell were 0.23II + 35.58I + 0.14(1)/2I (dividing univalent) for O. punctata x L. tisseranti; 0.11II + 35.51I + 0.22(1)/2I for O. punctata x L. perrieri; 0.17II + 35.63I + 0.11(1)/2I for O. latifolia x L. tisseranti; and 0.25II + 35.49I + 0.15(1)/2I for O. latifolia x L. perrieri. From these results, it seems that most of the bivalents observed at MI with a low frequency had originated from the autosyndetic association of the chromosomes of O. punctata or O. latifolia. The results described above suggest that there is no genomic relationship between the parental species in each cross combination.

斑点稻(2n = 48, BBCC)与长叶稻(2n = 24)、斑点稻与短叶稻(2n = 24)、长叶稻(2n = 48, CCDD)与长叶稻、长叶稻与短叶稻的属间杂交频率为0.11% ~ 0.23%。杂交种的植株形态与四倍体水稻非常相似。4个杂交组合得到的5个杂种体细胞染色体数为2n = 36(三单倍体)。每细胞的平均减数分裂染色体对数为0.23 i + 35.58I + 0.14(1)/2I(分裂单价);0.11 i + 35.51I + 0.22(1)/2I;0.17 i + 35.63I + 0.11(1)/2I;为0.25 i + 35.49I + 0.15(1)/2I。从这些结果来看,在MI上观察到的低频率二价体似乎大多来自于点状花或大叶花染色体的自合结合。上述结果表明,各杂交组合中亲本种之间不存在基因组关系。
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引用次数: 8
Repetitive DNA sequence families in Hemitaxonus minomensis and H. athyrii (Hymenoptera; Tenthredinidae). 膜翅目半轴蜂和青花蜂的重复DNA序列家族研究叶蜂科)。
Pub Date : 1995-02-01 DOI: 10.1266/jjg.70.7
S Sonoda, T Yamada, T Naito, F Nakasuji
Families of the repetitive DNA sequences from Hemitaxonus minomensis and H. athyrii were characterized. pHMS family and pHME family in H. minomensis consist of tandemly arranged arrays whose basic repeat units are 260 bp and 330 bp, respectively. pHAE family in H. athyrii consists of a tandemly arranged array whose basic repeat unit is 330 bp. pHMS family and pHME family occupy approximately 4.8% and 0.07% of the genome of H. minomensis, respectively. By contrast, in H. athyrii, pHAE family comprise 0.04% of the genome. Nucleotide sequence comparison of these three repetitive families showed very little homology. Southern blot hybridization using six species of Hemitaxonus showed that these repetitive families are species specific.
对双头半轴棘鱼和athyrii双头棘鱼的重复DNA序列进行了家族鉴定。小鲵pHMS家族和pHME家族由串联排列的序列组成,其基本重复单位分别为260 bp和330 bp。athyrii的pHAE家族是一个串联排列的序列,其基本重复单位为330bp。pHMS家族和pHME家族分别约占minomensis基因组的4.8%和0.07%。相比之下,在H. athyrii中,pHAE家族占基因组的0.04%。三个重复家族的核苷酸序列比较显示同源性很小。对6种半轴蝽的Southern blot杂交结果表明,这些重复科具有种特异性。
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引用次数: 9
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Idengaku zasshi
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