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Mountain is calling – decrypting the vocal phenology of an alpine bird species using passive acoustic monitoring 山在呼唤--利用被动声学监测解密高山鸟类的发声物候学
IF 1.8 3区 生物学 Q1 ORNITHOLOGY Pub Date : 2024-02-22 DOI: 10.1111/ibi.13314
Amandine Serrurier, Przemyslaw Zdroik, Res Isler, Tatiana Kornienko, Elisenda Peris-Morente, Thomas Sattler, Jean-Nicolas Pradervand

Monitoring vulnerable species inhabiting mountain environments is crucial to track population trends and prioritize conservation efforts. However, the challenging nature of these remote areas poses difficulties in implementing effective and consistent monitoring programmes. To address these challenges, we examined the potential of passive acoustic monitoring of a cryptic high mountain bird species, the Rock Ptarmigan Lagopus muta. For 5 months in each of two consecutive years, we deployed 38 autonomous recording units in 10 areas of the Swiss Alps where the species is monitored by a national count monitoring programme. Once the recordings were collected, we built a machine-learning algorithm to automate call recognition. We focused on studying the species' daily and seasonal calling phenology and relating these to meteorological and climatic data. Rock Ptarmigans were vocally active from March to July, with a peak of activity occurring between mid-March and late April, 1 or 2 months earlier than the second half of May when the counts of the monitoring programme take place. The calling rate peaked at dawn before dropping rapidly until sunrise. Daily vocal activity demonstrated a consistent association with weather conditions and moon phase, whereas the timing of seasonal vocal activity varied with temperature and snow conditions. We found that the peak of vocal activity occurred when the snowpack was still thick and snow cover was close to 100% but with a local peak of high temperatures. Between our two study years, the peak of vocal activity occurred 30 days later in the colder year, suggesting phenological plasticity in relation to environmental conditions. Passive acoustic monitoring has the potential to complement conventional acoustic counts of cryptic birds by highlighting periods of higher detectability of individuals, and to survey small populations that often remain undetected during single visits. Moreover, our study supports the idea that passive acoustic monitoring can provide valuable data over large spatial and temporal scales, allowing decryption of hidden ecological patterns and assisting in conservation efforts.

监测栖息在山区环境中的脆弱物种对于跟踪种群趋势和确定保护工作的优先次序至关重要。然而,这些偏远地区具有挑战性的自然环境给实施有效、一致的监测计划带来了困难。为了应对这些挑战,我们研究了对一种隐蔽的高山鸟类--岩鸻(Lagopus muta)进行被动声学监测的潜力。在连续两年的每年 5 个月中,我们在瑞士阿尔卑斯山的 10 个地区部署了 38 个自主记录单元,这些地区的国家计数监测计划对该物种进行了监测。收集到记录后,我们建立了一种机器学习算法来自动识别叫声。我们重点研究了该物种的日常和季节性叫声表型,并将其与气象和气候数据联系起来。岩鸻的叫声活跃期为 3 月至 7 月,活动高峰出现在 3 月中旬至 4 月下旬,比监测计划进行计数的 5 月下半月早 1 或 2 个月。鸣叫频率在黎明达到高峰,然后迅速下降,直到日出。每天的鸣叫活动与天气状况和月相有一致的联系,而季节性鸣叫活动的时间则随气温和积雪情况而变化。我们发现,当积雪仍然很厚,积雪覆盖率接近 100%,但当地气温达到峰值时,是鸣叫活动的高峰期。在我们进行研究的两个年份之间,发声活动的高峰出现在较冷年份的 30 天之后,这表明了与环境条件有关的物候可塑性。被动声学监测可以对隐鸟的常规声学计数进行补充,突出个体可探测性较高的时期,并调查在单次访问中经常未被发现的小种群。此外,我们的研究还支持这样一种观点,即被动声学监测可以在大时空尺度上提供有价值的数据,从而解密隐藏的生态模式并协助开展保护工作。
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引用次数: 0
Migration mortality in birds 鸟类的迁徙死亡率
IF 1.8 3区 生物学 Q1 ORNITHOLOGY Pub Date : 2024-02-16 DOI: 10.1111/ibi.13316
Ian Newton

Bird migration is one of the greatest wildlife spectacles, producing massive global changes in the distributions of birds twice each year. To understand the evolution of this phenomenon, it is important to know the costs of these journeys in terms of the mortality they impose. The use of mark/re-sighting and tracking studies has now made it possible, for some bird species, to separate mortality during migration from mortality during stationary periods. This paper aims to assess this information, based mainly on 31 published studies, most of which concern long-distance migrations of passerines, large waterfowl and raptors. Most of these studies revealed that mortality rates were greater during migration than at other times – in some species more than 20 times greater. Overall, on the basis of median values, mortality per unit time during autumn journeys was about 3.0 times greater than mortality during stationary periods, during spring journeys about 6.3 times greater, and during autumn and spring journeys combined 4.4 times greater. The greater overall mortality on spring journeys was largely associated with more adverse wind conditions in spring than in autumn. High mortality rates were especially evident in birds crossing large ecological barriers, such as the Sahara Desert or the Gulf of Mexico, and were higher in that part of their journey than when crossing more benign terrain. There was no increase in mortality during migration in the adults of some long-lived species with high annual survival and predominantly overland journeys; for these birds, much larger samples of year-round tracked individuals will be needed to reveal any seasonal variations in mortality. Within certain species, birds that travelled long distances experienced greater mortality over the journey than those that travelled short distances, but in other species no such relationship was found. In species in which adults and juveniles were followed over the same journey, juveniles showed greater mortality. To judge from other studies, this difference could be attributed to the inexperience of juveniles, their lower feeding rates and flight efficiency, greater vulnerability to hazards such as weather and predation, or more frequent navigational errors. Broadly speaking, the risks of migration vary with features of the birds themselves, with the terrain to be crossed and with weather at the time. It may be assumed that migration persists in the long term because the costs (in terms of associated mortality) are more than offset by the benefits of breeding and wintering in different areas (in terms of improved overall survival and breeding success). To provide further understanding of migration mortality, suggestions are made on the types of studies required and on how they could best be conducted.

鸟类迁徙是最伟大的野生动物奇观之一,每年两次造成全球鸟类分布的巨大变化。要了解这一现象的演变,就必须知道这些旅程的代价,即它们造成的死亡。现在,对于某些鸟类来说,利用标记/重见和跟踪研究已经能够将迁徙期间的死亡率与静止期间的死亡率区分开来。本文旨在评估这些信息,主要基于 31 项已发表的研究,其中大部分研究涉及通鸟、大型水禽和猛禽的长途迁徙。这些研究大多表明,迁徙期间的死亡率比其他时间高,有些物种的死亡率比其他时间高 20 多倍。总体而言,根据中位值,秋季迁徙期间的单位时间死亡率是静止期间的 3.0 倍,春季迁徙期间的单位时间死亡率是 6.3 倍,秋季和春季迁徙期间的单位时间死亡率之和是 4.4 倍。春季旅途中总体死亡率较高主要与春季比秋季更恶劣的风况有关。在穿越撒哈拉沙漠或墨西哥湾等大型生态屏障时,鸟类的死亡率尤其明显,而且这部分旅程的死亡率要高于穿越较温和地形时的死亡率。一些年存活率高且主要为陆路迁徙的长寿鸟类的成鸟在迁徙过程中死亡率没有增加;对于这些鸟类,需要对全年追踪的个体进行更大规模的取样,才能揭示死亡率的季节性变化。在某些物种中,长途迁徙的鸟类在迁徙途中的死亡率高于短途迁徙的鸟类,但在其他物种中却没有发现这种关系。在对成鸟和幼鸟进行同程跟踪的物种中,幼鸟的死亡率更高。根据其他研究判断,造成这种差异的原因可能是幼鸟缺乏经验、觅食率和飞行效率较低、更容易受到天气和捕食等危险的影响,或者更频繁地出现导航错误。总的来说,迁徙的风险因鸟类本身的特点、要穿越的地形和当时的天气而异。可以认为,迁徙之所以会长期存在,是因为在不同地区繁殖和越冬所带来的好处(提高整体存活率和繁殖成功率)足以抵消迁徙的成本(相关死亡率)。为了进一步了解迁徙死亡率,本文就所需的研究类型和最佳研究方式提出了建议。
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引用次数: 0
When passive nest defence is active: support of the leave early and avoid detection hypothesis in a plover 当被动巢穴防御成为主动时:支持鸻的 "及早离开并避免被发现 "假说
IF 1.8 3区 生物学 Q1 ORNITHOLOGY Pub Date : 2024-02-16 DOI: 10.1111/ibi.13313
Sonia Sanchez-Gomez, Daniel Lees, Michael A. Weston, Grainne S. Maguire

Leaving the nest early to avoid detection by an approaching predator is an often-cited form of nest defence among ground-nesting birds, yet has rarely been quantitatively demonstrated. During the breeding season, we recorded Flight-initiation Distances (FIDs) of incubating, off-duty and non-breeding Hooded Plovers Thinornis cucuallatus cucuallatus in Victoria, Australia. Hooded Plovers exhibited longer FIDs when incubating compared with when off-duty or non-breeding birds (the latter two categories had similar FIDs). Our study supports the Leave Early to Avoid Detection (LEAD) hypothesis, and demonstrates that so-called ‘passive’ defence is in fact an active decision by the incubator to leave nests at distances which exceed those at which birds without nests or off-duty commence escape.

提早离开巢穴以避免被接近的捕食者发现是地栖鸟类经常提到的一种巢穴防御方式,但很少有定量的证据。在繁殖季节,我们在澳大利亚维多利亚州记录了孵化期、休产期和非繁殖期帽带鸻(Thinornis cucuallatus cucuallatus)的飞行起始距离(FID)。与休班或不繁殖的鸟类相比,正在孵化的帽滨鸻表现出更长的飞行距离(后两类鸟类的飞行距离相似)。我们的研究支持 "及早离开以避免被发现(LEAD)"的假说,并证明所谓的 "被动 "防御实际上是孵化者主动决定离开巢穴的距离,其距离超过了无巢穴鸟类或休班鸟类开始逃跑的距离。
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引用次数: 0
Survival rates of wild and released White-rumped Vultures (Gyps bengalensis), and their implications for conservation of vultures in Nepal 野生和放归的白腰秃鹫(Gyps bengalensis)的存活率及其对尼泊尔秃鹫保护的影响
IF 1.8 3区 生物学 Q1 ORNITHOLOGY Pub Date : 2024-02-13 DOI: 10.1111/ibi.13303
John W. Mallord, Krishna P. Bhusal, Ankit B. Joshi, Bikalpa Karki, Ishwari P. Chaudhary, Devendra Chapagain, Deelip C. Thakuri, Deu B. Rana, Toby H. Galligan, Susana Requena, Christopher G. R. Bowden, Rhys E. Green

Beginning in the mid-1990s, populations of three species of Gyps vultures declined by more than 97% in South Asia in little more than a decade, caused by unintentional poisoning by the non-steroidal anti-inflammatory drug (NSAID) diclofenac. This led to a ban on the veterinary use of the drug, and establishment of conservation breeding programmes, throughout the region. Once much of Nepal had been confirmed as being free from diclofenac, beginning in 2017 White-rumped Vultures Gyps bengalensis were released from the captive breeding population. A total of 99 birds (n = 50 wild and n = 49 released) were fitted with GPS transmitters between 2017 and 2022 and monitored daily. Tag fixes suggesting death or ill-health were followed up and dead vultures were retrieved for post-mortem analysis. The estimated annual survival of wild adult vultures was 0.974 (95% confidence interval [CI] 0.910–0.997), while that of wild subadults was 0.880 (95% CI 0.721–0.966). Survival rates of released birds were lower than those of wild birds, being 0.644 (95% CI 0.490–0.778) for adults and 0.758 (95% CI 0.579–0.887) for subadults. Post-mortem analysis of dead vultures indicated several possible causes of death, including predation, infection and electrocution. There was no evidence that any birds died of NSAID poisoning. The high survival rates of wild birds, especially adults, and the lack of evidence for NSAID-caused mortality, suggest that vulture habitat in the Nepal Vulture Safe Zone is free from diclofenac and that other hazards are sufficiently infrequent to allow the vulture population to recover. The lower survival of released birds compared with their wild counterparts suggests a need to improve the conservation breeding programme and release protocol.

从 20 世纪 90 年代中期开始,由于非甾体抗炎药(NSAID)双氯芬酸的意外中毒,南亚三种秃鹫的数量在短短十多年内减少了 97% 以上。这导致整个地区禁止兽医使用该药物,并制定了保护性繁殖计划。尼泊尔大部分地区被确认不含双氯芬酸后,从 2017 年开始,白腰秃鹫 Gyps bengalensis 从圈养繁殖种群中被释放。在 2017 年至 2022 年期间,共为 99 只鸟类(n = 50 只野生鸟类和 n = 49 只放归鸟类)安装了 GPS 发射器,并对其进行日常监测。对提示死亡或健康状况不佳的标签固定情况进行跟踪,并收回死亡秃鹫进行尸检分析。野生成年秃鹫的估计年存活率为 0.974(95% 置信区间 [CI] 0.910-0.997),野生亚成年秃鹫的估计年存活率为 0.880(95% 置信区间 [CI] 0.721-0.966)。放归鸟类的存活率低于野生鸟类,成鸟为 0.644(95% CI 0.490-0.778),亚成鸟为 0.758(95% CI 0.579-0.887)。对死亡秃鹫的尸检分析表明了几种可能的死亡原因,包括捕食、感染和触电。没有证据表明任何鸟类死于非甾体抗炎药中毒。野生鸟类,尤其是成年鸟类的高存活率以及缺乏非甾体类抗炎药致死的证据表明,尼泊尔秃鹫安全区内的秃鹫栖息地没有双氯芬酸,而且其他危害也很少发生,足以使秃鹫种群得以恢复。与野生鸟类相比,放归鸟类的存活率较低,这表明有必要改进保护繁殖计划和放归规程。
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引用次数: 0
Evaluation of tag attachment techniques for plunge-diving terns 评估跳水燕鸥的标签固定技术
IF 1.8 3区 生物学 Q1 ORNITHOLOGY Pub Date : 2024-02-04 DOI: 10.1111/ibi.13306
Ruben C. Fijn, Rob S. A. van Bemmelen, Mark P. Collier, Wouter Courtens, E. Emiel van Loon, Martin J. M. Poot, Judy Shamoun-Baranes

A wide variety of attachment techniques have been used to track birds with electronic tags, with glue, tape, leg rings, neck collars and harnesses being the most common methods. In general, the choice of attachment method should strive to minimize tagging effects, but ensure that sufficient data are collected to address the research question at hand. The aim of our study was to develop and evaluate tag attachment methods to track Sandwich Terns Thalasseus sandvicensis during the last part of the incubation and the chick-rearing period of one breeding season. Tag attachments had to stay on for the duration of the chick-rearing period (5–6 weeks) and be non-restraining and flexible, but strong enough to withstand the forces and submersion associated with their plunge-diving foraging technique. We first experimentally tested the durability of flexible material under various environmental conditions with the aim of developing a self-releasing harness. Then, in field studies, we compared three different attachment methods on terns during the breeding seasons, attaching tags to dorsal feathers using (1) tape, (2) glue or (3) a newly developed harness made specifically for short-term deployments of one chick-rearing period and constructed from degradable material. Assessment of the performance of attachment methods was based on retention time of the loggers and on annual survival rates of tagged individuals in comparison with non-tagged individuals. The use of tape and glue led to premature loss of tags (median minimum retention time (range) of 3 (1–4) days and 15 (5–26) days, respectively), whereas the self-releasing harness had a median minimum retention time of 42 (18–91) days, which is sufficient to track Sandwich Terns during the entire chick-rearing period. The apparent annual survival of birds tagged using glue or tape did not differ from that observed in non-tagged control birds. In contrast, birds fitted with the self-releasing harnesses might have experienced a lower survival rate than control birds. Entanglement of birds in the harness material was incidentally observed in three cases, which may have contributed to the lower survival rates observed in this group. The risk of entanglement can potentially be mitigated with a leg-loop harness instead of a full-body harness. Our results highlight the necessity of careful consideration when selecting appropriate attachment methods. Specifically, there is a need to address whether the research questions and desired tracking duration justify the use of a harness and the higher impact that it entails, or whether a tape or glue-mount is sufficient. More broadly, sharing field expertise in tag attachments across studies is essential to successful deployments while minimizing the impact on animals.

使用电子标签跟踪鸟类的附着技术种类繁多,其中胶水、胶带、腿环、颈圈和背带是最常用的方法。一般来说,选择附着方法时应尽量减少标签的影响,同时确保收集到足够的数据来解决手头的研究问题。我们的研究目的是开发和评估标签固定方法,以便在一个繁殖季节的孵化和雏鸟饲养的最后阶段跟踪夹心燕鸥(Thalasseus sandvicensis)。标签附着物必须在雏鸟育雏期(5-6 周)内持续附着,且不具束缚性和柔韧性,但要足够坚固,以承受与雏鸟俯冲觅食技术相关的外力和浸没。我们首先对柔性材料在各种环境条件下的耐久性进行了实验测试,目的是开发一种自动释放的背带。然后,在野外研究中,我们比较了燕鸥在繁殖季节的三种不同附着方法,即使用(1)胶带、(2)胶水或(3)新开发的、专门用于育雏期短期部署的、由可降解材料制成的背带将标签附着在背羽上。根据记录器的保留时间以及被标记个体与未被标记个体的年存活率,对各种固定方法的性能进行评估。使用胶带和胶水会导致标签过早丢失(中位数最短保留时间(范围)分别为3(1-4)天和15(5-26)天),而自释放背带的中位数最短保留时间为42(18-91)天,这足以在整个雏燕孵化期跟踪三明治燕鸥。使用胶水或胶带标记的鸟类每年的存活率与未标记的对照鸟类没有明显差异。相比之下,安装了自动释放绳套的鸟类的存活率可能低于对照组鸟类。偶然观察到三只鸟类被绳套材料缠住,这可能是导致该组鸟类存活率较低的原因。使用腿环式背带而非全身式背带有可能降低缠绕风险。我们的研究结果突出表明,在选择适当的固定方法时必须慎重考虑。具体来说,需要解决的问题是,研究问题和所需的追踪时间是否证明使用背带及其带来的更大影响是合理的,还是使用胶带或胶水固定就足够了。从更广泛的意义上讲,在不同的研究中分享标签固定的现场专业知识对于成功部署标签和最大限度地减少对动物的影响至关重要。
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引用次数: 0
When slow explorers are fast: Personality-related differences in timing of migration in Red Knots (Calidris canutus) 当慢探索者变得快时红节鸟迁徙时间的个性差异
IF 1.8 3区 生物学 Q1 ORNITHOLOGY Pub Date : 2024-02-01 DOI: 10.1111/ibi.13308
Selin Ersoy, Ton G. G. Groothuis, Theunis Piersma, Allert I. Bijleveld

The timing of migration varies significantly among individuals, even within populations sharing breeding sites. Consistent individual behavioural differences, known as personality traits, have been linked to variation in movement behaviour. However, little attention has been given to investigating whether personality traits can explain such variation in the timing of migration. We studied post-breeding migration of Red Knots Calidris canutus islandica breeding in the High Arctic and wintering in European coastal areas. We captured Red Knots in the Dutch Wadden Sea, a main non-breeding and moulting site, and assessed their exploration behaviour, a personality trait, before releasing them with colour-rings. We first investigated whether arrival timing in marine areas was associated with exploration speed. Secondly, we asked whether slow explorers were more likely to fly non-stop to the Wadden Sea compared with fast explorers, as faster explorers were expected to move more and visit more staging sites. To determine arrival timing in marine non-breeding areas and non-stop flights to the Wadden Sea, we analysed isotope signatures in blood samples collected after capture, as these differ between the terrestrial breeding grounds (arthropod diet) and marine non-breeding and moulting sites (benthic invertebrate diet). Thirdly, we estimated arrival time in the Wadden Sea based on primary moult progress, allowing us to examine the relationship between arrival timing estimated from isotope values and the onset of moult. Our findings revealed that slower exploring Red Knots departed earlier from the breeding site and were more likely to fly non-stop to the Wadden Sea than were faster exploring individuals. Arrival timing to marine areas as estimated from isotope analyses predicted arrival timing in the Wadden Sea (via moult progress) but this relationship exhibited significant variation, possibly due to individual differences in the use of staging sites en route. By migrating early, slower explorers can better outpace the aerial predators also arriving at the Wadden Sea moulting site and thereby reduce mortality risk due to predation.

即使在共享繁殖地的种群中,不同个体的迁徙时间也有很大差异。一致的个体行为差异(即个性特征)与迁徙行为的变化有关。然而,人们很少关注个性特征能否解释迁徙时间的这种差异。我们研究了在北极高纬度地区繁殖、在欧洲沿海地区越冬的红海鸮(Calidris canutus islandica)的繁殖后迁徙。我们在荷兰瓦登海(主要的非繁殖地和蜕皮地)捕获了红海鸮,并评估了它们的探索行为(一种个性特征),然后将它们带着色环放归。我们首先研究了到达海域的时间是否与探索速度有关。其次,我们询问与快速探索者相比,慢速探索者是否更有可能马不停蹄地飞往瓦登海,因为预计快速探索者会移动得更多并访问更多的停歇地。为了确定到达海洋非繁殖区和直飞瓦登海的时间,我们分析了捕获后收集的血液样本中的同位素特征,因为陆地繁殖地(节肢动物食物)和海洋非繁殖地及蜕皮地(底栖无脊椎动物食物)的血液样本中的同位素特征不同。第三,我们根据初级蜕皮的进展情况估算了到达瓦登海的时间,从而可以研究根据同位素值估算的到达时间与蜕皮开始时间之间的关系。我们的研究结果表明,与探索速度较快的个体相比,探索速度较慢的红腹滨鹬更早离开繁殖地,更有可能马不停蹄地飞往瓦登海。通过同位素分析估计的到达海洋区域的时间可以预测到达瓦登海的时间(通过蜕皮进度),但这种关系表现出显著的差异,这可能是由于个体在途中使用中转站的差异造成的。通过提前迁徙,速度较慢的探索者可以更好地超越同样到达瓦登海蜕皮地点的空中捕食者,从而降低捕食导致的死亡风险。
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引用次数: 0
A novel deep learning-based bioacoustic approach for identification of look-alike white-eye (Zosterops) species traded in wildlife markets 基于深度学习的新型生物声学方法,用于识别野生动物市场上交易的相似白眼(Zosterops)物种
IF 1.8 3区 生物学 Q1 ORNITHOLOGY Pub Date : 2024-02-01 DOI: 10.1111/ibi.13309
Shan Su, Dahe Gu, Jun-Yu Lai, Nico Arcilla, Tai-Yuan Su

The songbird trade crisis in East and South East Asia has been fuelled by high demand, driving many species to the brink of extinction. This demand, driven by the desire for songbirds as pets, for singing competitions and for prayer animal release has led to the overexploitation of numerous species and the introduction and spread of invasive alien species and diseases to novel environments. The ability to identify traded species efficiently and accurately is crucial for monitoring bird trade markets, protecting threatened species and enforcing wildlife laws. Citizen scientists can make major contributions to these conservation efforts but may be constrained by difficulties in distinguishing ‘look-alike’ bird species traded in markets. To address this challenge, we developed a novel deep learning-based Artificial Intelligence (AI) bioacoustic tool to enable citizen scientists to identify bird species traded in markets. To this end, we used three major avian vocalization databases to access bioacoustic data for 15 morphologically similar White-eye (Zosterops) species that are commonly traded in Asian wildlife markets. Specifically, we employed the Inception v3 pre-trained model to classify the 15 White-eye species and ambient sound (i.e. non-bird sound) using 448 bird recordings we obtained. We converted recordings into spectrogram (i.e. image form) and used eight image augmentation methods to enhance the performance of the AI neural network through training and validation. We found that recall, precision and F1 score increased as the amount of data augmentation increased, resulting in up to 91.6% overall accuracy and an F1 score of 88.8% for identifying focal species. Through the application of bioacoustics and deep learning, this approach would enable citizen scientists and law enforcement officials efficiently and accurately to identify prohibited trade in threatened species, making important contributions to conservation.

高需求助长了东亚和东南亚的鸣禽贸易危机,使许多物种濒临灭绝。人们希望将鸣禽作为宠物、参加歌唱比赛和放生祈福动物,这种需求导致许多物种被过度开发,外来入侵物种和疾病被引入新环境并蔓延开来。有效、准确地识别交易物种的能力对于监控鸟类交易市场、保护濒危物种和执行野生动物法律至关重要。公民科学家可以为这些保护工作做出重大贡献,但可能会受到难以区分市场上交易的 "相似 "鸟类物种的限制。为了应对这一挑战,我们开发了一种基于深度学习的新型人工智能(AI)生物声学工具,使公民科学家能够识别市场上交易的鸟类物种。为此,我们利用三大鸟类发声数据库,获取了亚洲野生动物市场上常见的 15 种形态相似的白眼鸟(Zosterops)的生物声学数据。具体来说,我们使用 Inception v3 预先训练的模型,利用获得的 448 份鸟类录音对 15 种白眼鸟和环境声音(即非鸟类声音)进行分类。我们将录音转换成频谱图(即图像形式),并使用八种图像增强方法,通过训练和验证提高人工智能神经网络的性能。我们发现,随着数据增强量的增加,召回率、精确度和 F1 分数也随之增加,从而使识别重点物种的总体准确率高达 91.6%,F1 分数为 88.8%。通过应用生物声学和深度学习,这种方法将使公民科学家和执法人员能够高效、准确地识别濒危物种的违禁贸易,为保护做出重要贡献。
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引用次数: 0
A review of niche segregation across sympatric breeding seabird assemblages 同域繁殖海鸟群的生态位隔离综述
IF 1.8 3区 生物学 Q1 ORNITHOLOGY Pub Date : 2024-02-01 DOI: 10.1111/ibi.13310
Christina Petalas, Francis van Oordt, Raphaël A. Lavoie, Kyle H. Elliott

Breeding seabirds challenge the concept of niche segregation among competing species because similar competitors with comparable life histories can coexist in large multi-species colonies. This makes them an ideal model organism for studying the Hutchisonian niche model, which proposes interspecific niche segregation, across n-dimensions. Recent advances in assessment of ecological niches have improved our understanding of the mechanisms leading to at-sea segregation. We examine 152 published studies investigating one or more of three niche spaces in breeding seabirds: dietary items, stable isotopes (isotopic niche) and spatial distribution (horizontal and vertical). Most studies focused on one rather then multiple niche spaces in combination. When multiple niche spaces were combined, higher segregation than overlap was reported, compared with when niche spaces were assessed individually, as is predicted by the n-dimensional hypervolume concept. Studies investigating vertical (diving) foraging dimensions in addition to the more traditional horizontal (spatial) assessment reported more spatial segregation than overlap, compared with studies focusing only on horizontal or vertical dimensions. Segregation increased with colony size, suggesting an effect of competition. Segregation also increased during chick-rearing, when taxa were more phylogenetically distant, and when foraging ecology was more similar. To gain a comprehensive understanding of sympatric competitors' interactions and their ecological niche space, it is important to combine approaches and standardize methodologies. Embracing multidimensional approaches to assess niche segregation in seabird species can inform effective conservation and management practices in marine ecosystems.

繁殖海鸟挑战了竞争物种间生态位隔离的概念,因为具有相似生活史的相似竞争者可以在大型多物种群落中共存。这使它们成为研究哈奇森生态位模型的理想模式生物,该模型提出了跨 n 维的种间生态位隔离。生态位评估方面的最新进展提高了我们对海区隔离机制的理解。我们考察了已发表的 152 项研究,这些研究调查了繁殖海鸟的三个生态位空间中的一个或多个:食物项目、稳定同位素(同位素生态位)和空间分布(水平和垂直)。大多数研究只关注一个生态位空间,而不是多个生态位空间的组合。与单独评估生态位时相比,将多个生态位结合在一起时,报告的隔离度要高于重叠度,这也是 n 维超体积概念所预测的。与只关注水平或垂直维度的研究相比,除了更传统的水平(空间)评估外,调查垂直(潜水)觅食维度的研究也报告了更多的空间隔离而非重叠。分离现象随着蚁群规模的扩大而增加,这表明竞争会产生影响。在雏鸟哺育期间、分类群系统发育距离较远以及觅食生态较为相似时,分离现象也会增加。为了全面了解同域竞争者的相互作用及其生态位空间,必须将各种方法结合起来,并使方法标准化。采用多维方法评估海鸟物种的生态位隔离,可为海洋生态系统的有效保护和管理实践提供信息。
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引用次数: 0
Distinct bird communities in forests and fruit farms of Caatinga landscapes 卡廷加地貌森林和果园中的独特鸟类群落
IF 1.8 3区 生物学 Q1 ORNITHOLOGY Pub Date : 2024-01-31 DOI: 10.1111/ibi.13311
Natalia B. Zielonka, Eduardo Arellano, Liam P. Crowther, Vinina Ferreira, Andrés Muñoz-Sáez, Patricia Oliveira-Rebouças, Fabiana Oliveira da Silva, Simon J. Butler, Lynn V. Dicks

Agricultural expansion and intensification drive changes in bird assemblages and contribute to the homogenization of communities. By working across the semi-arid biome of the Caatinga in northeastern Brazil, this study is the first to compare the bird communities found in intensively managed fruit farms with those in remnant Caatinga forest patches. We show that fruit farm patches host 56% lower bird abundance and 61% lower species richness compared with the remnant Caatinga forest fragments. Bird communities within the fruit farms were distinct from those within the forest patches, and they were characterized by species with broader niches, including two non-native species.

农业扩张和集约化促使鸟类群落发生变化,并导致群落同质化。通过对巴西东北部卡廷加半干旱区生物群落的研究,本研究首次对密集管理的水果农场与卡廷加残存森林斑块中的鸟类群落进行了比较。我们发现,与残存的卡廷加林片区相比,水果农场片区的鸟类丰度低 56%,物种丰富度低 61%。水果农场内的鸟类群落与森林斑块内的鸟类群落截然不同,其特点是物种的栖息地更广,其中包括两种非本地物种。
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引用次数: 0
Species status and phylogenetic relationships of the enigmatic Negros Fruit Dove (Ptilinopus arcanus) 神秘的内格罗斯果鸽(Ptilinopus arcanus)的物种地位和系统发育关系
IF 1.8 3区 生物学 Q1 ORNITHOLOGY Pub Date : 2024-01-29 DOI: 10.1111/ibi.13305
John A. Nash, Richard C. Harrington, Kristof Zyskowski, Thomas J. Near, Richard O. Prum

The Negros Fruit Dove Ptilinopus arcanus is an enigmatic bird known only from a single specimen collected on Negros Island, Philippines, in 1953. We extracted and sequenced ultra-conserved elements from historical toe-pad samples of the type specimen of P. arcanus and 27 other species of ptilinopine doves to investigate the species status and phylogenetic relationships of this taxon. We establish that P. arcanus represents a valid species, resolve its phylogenetic position at the base of the radiation of ‘core’ Ptilinopus fruit doves, and estimate that P. arcanus diverged from its most recent common ancestor several million years before Negros Island emerged from the seafloor. We also perform an ancestral range reconstruction to evaluate the effect of different altitudinal preferences on the putative historical range of this species, and we discuss how these findings can inform future efforts to relocate and potentially conserve this species.

内格罗斯果鸽(Ptilinopus arcanus)是一种神秘的鸟类,仅从 1953 年在菲律宾内格罗斯岛采集的一个标本中获知。我们从 P. arcanus 的模式标本和其他 27 种鹦形目鸽子的历史趾垫样本中提取了超保守元素并对其进行了测序,以研究该类群的物种地位和系统发育关系。我们确定 P. arcanus 是一个有效的物种,确定了它在 "核心 "鹦哥果鸽辐射基础上的系统发育位置,并估计 P. arcanus 在内格罗斯岛从海底出现之前几百万年就已经从其最近的共同祖先分化出来。我们还进行了祖先分布区重建,以评估不同海拔偏好对该物种推定历史分布区的影响,并讨论了这些发现如何为未来该物种的迁移和潜在保护工作提供信息。
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引用次数: 0
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