Azusa Kuroda, Yota Suzuki, Yoshihisa Shintani, Tomoaki Sugaya, Koji Ishihara
Quasi-tetrahedral o-azophenylboronic acid (azoB-ROH), which contains the protic solvent ROH, is a key species in the colorimetric sensing of saccharides by o-azophenylboronic acid (azoB). In this study, we compared the reactivity of azoB-ROH with that of trigonal azoB and tetrahedral o-azophenylboronate (azoB-OH−), and clarified the reaction mechanism of azoB-ROH with cis-1,2-cyclopentanediol and D-glucose. Analysis of the kinetics of the reactions of azoB with cis-1,2-cyclopentanediol and D-glucose in DMSO:water = 1:9 and azoB with cis-1,2-cyclopentanediol in tetrahydrofuran containing a small amount of methanol revealed that there was not much difference in the reactivity of azoB-H2O and azoB-OH−, although the reactivity of azoB was higher than that of azoB-MeOH, that is, the reaction mechanism of azoB-H2O was essentially the same as that of azoB-OH−.
{"title":"Reactivity and detailed reaction mechanism of quasi-tetrahedral o-azophenylboronic acid","authors":"Azusa Kuroda, Yota Suzuki, Yoshihisa Shintani, Tomoaki Sugaya, Koji Ishihara","doi":"10.1002/kin.21726","DOIUrl":"10.1002/kin.21726","url":null,"abstract":"<p>Quasi-tetrahedral <i>o</i>-azophenylboronic acid (azoB-ROH), which contains the protic solvent ROH, is a key species in the colorimetric sensing of saccharides by <i>o</i>-azophenylboronic acid (azoB). In this study, we compared the reactivity of azoB-ROH with that of trigonal azoB and tetrahedral <i>o</i>-azophenylboronate (azoB-OH<sup>−</sup>), and clarified the reaction mechanism of azoB-ROH with <i>cis</i>-1,2-cyclopentanediol and D-glucose. Analysis of the kinetics of the reactions of azoB with <i>cis</i>-1,2-cyclopentanediol and D-glucose in DMSO:water = 1:9 and azoB with <i>cis</i>-1,2-cyclopentanediol in tetrahydrofuran containing a small amount of methanol revealed that there was not much difference in the reactivity of azoB-H<sub>2</sub>O and azoB-OH<sup>−</sup>, although the reactivity of azoB was higher than that of azoB-MeOH, that is, the reaction mechanism of azoB-H<sub>2</sub>O was essentially the same as that of azoB-OH<sup>−</sup>.</p>","PeriodicalId":13894,"journal":{"name":"International Journal of Chemical Kinetics","volume":null,"pages":null},"PeriodicalIF":1.5,"publicationDate":"2024-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140838861","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Seyed B. Nourani Najafi, Sander Gersen, Hamid Hashemi, Peter Glarborg, Anatoli V. Mokhov, Howard B. Levinsky
The effect of small fractions of acetaldehyde (CH3CHO) on the ignition delay time of methane (CH4) was examined at high pressure. Measurements are reported for the ignition delay time obtained in a rapid compression machine (RCM) at a compression pressure (Pc) of ∼60 bar and temperatures after compression (Tc) in the range 750–900 K for fuel-air equivalence ratios ϕ in the range 1–4. The results show that mixtures of 2%–5% CH3CHO in CH4 ignite under conditions at which pure methane does not ignite experimentally. The efficiency of acetaldehyde as a promoter seems to be comparable to that of other oxygenated fuels like alcohols and ethers. For comparison with the experimental results, ignition delay times are computed using an updated reaction mechanism and two mechanisms from the literature for CH3CHO oxidation. For most conditions, the simulations using the current mechanism agree with the measurements to within a factor of two. The ignition profile shows a pre-ignition temperature rise and two-stage ignition similar to that previously observed in low fractions of dimethyl ether in ammonia; both phenomena are captured by the simulations. Analysis of simulations at constant volume indicates that CH3CHO is oxidized much more rapidly than CH4, producing reactive species that initiate the oxidation of CH4 and generates heat that accelerates oxidation toward ignition. The low-temperature chain-branching reactions of CH3CHO are important in the early oxidation of the fuel mixture. Additional simulations were performed for equivalence ratios of ϕ = 1 and 4, at a compression pressure (Pc) of 100 bar and Tc = 750–1000 K. The simulations indicate that CH3CHO has a strong ignition-enhancing effect on CH4, with small fractions reducing the ignition delay time by up to a factor of 100, depending on the temperature, as compared to pure CH4.
{"title":"Autoignition enhancement of methane by admixture of low fraction of acetaldehyde: Simulations and RCM experiments in stoichiometric and rich mixtures","authors":"Seyed B. Nourani Najafi, Sander Gersen, Hamid Hashemi, Peter Glarborg, Anatoli V. Mokhov, Howard B. Levinsky","doi":"10.1002/kin.21727","DOIUrl":"10.1002/kin.21727","url":null,"abstract":"<p>The effect of small fractions of acetaldehyde (CH<sub>3</sub>CHO) on the ignition delay time of methane (CH<sub>4</sub>) was examined at high pressure. Measurements are reported for the ignition delay time obtained in a rapid compression machine (RCM) at a compression pressure (<i>P</i><sub>c</sub>) of ∼60 bar and temperatures after compression (<i>T</i><sub>c</sub>) in the range 750–900 K for fuel-air equivalence ratios <i>ϕ</i> in the range 1–4. The results show that mixtures of 2%–5% CH<sub>3</sub>CHO in CH<sub>4</sub> ignite under conditions at which pure methane does not ignite experimentally. The efficiency of acetaldehyde as a promoter seems to be comparable to that of other oxygenated fuels like alcohols and ethers. For comparison with the experimental results, ignition delay times are computed using an updated reaction mechanism and two mechanisms from the literature for CH<sub>3</sub>CHO oxidation. For most conditions, the simulations using the current mechanism agree with the measurements to within a factor of two. The ignition profile shows a pre-ignition temperature rise and two-stage ignition similar to that previously observed in low fractions of dimethyl ether in ammonia; both phenomena are captured by the simulations. Analysis of simulations at constant volume indicates that CH<sub>3</sub>CHO is oxidized much more rapidly than CH<sub>4</sub>, producing reactive species that initiate the oxidation of CH<sub>4</sub> and generates heat that accelerates oxidation toward ignition. The low-temperature chain-branching reactions of CH<sub>3</sub>CHO are important in the early oxidation of the fuel mixture. Additional simulations were performed for equivalence ratios of <i>ϕ</i> = 1 and 4, at a compression pressure (<i>P</i><sub>c</sub>) of 100 bar and <i>T</i><sub>c</sub> = 750–1000 K. The simulations indicate that CH<sub>3</sub>CHO has a strong ignition-enhancing effect on CH<sub>4</sub>, with small fractions reducing the ignition delay time by up to a factor of 100, depending on the temperature, as compared to pure CH<sub>4</sub>.</p>","PeriodicalId":13894,"journal":{"name":"International Journal of Chemical Kinetics","volume":null,"pages":null},"PeriodicalIF":1.5,"publicationDate":"2024-04-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/kin.21727","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140671246","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Dan Yang, Hua Zhang, Fengyi Cao, Sijia Chang, Guihao Tan, Lin Ji
The inherent autocatalytic kinetics of the urea–urease–H+ system positions it as a promising candidate for the design of dynamic materials with time-domain programmable functions. Nevertheless, the stability of the enzyme can markedly influence the temporal evolution dynamics of the system and curtail its widespread applicability. This work employs several kinds of enzyme stabilization methods, including chemical cross-linking, physical coating, solvent stabilization, and solvent-physical coating co-modification, to systematically explore the impact of enzyme stabilization on clock reaction dynamics. Extensive experimental tests and analysis indicate that solvent and chemical cross-linking stabilization methods can better preserve clock dynamics with sensitive switching ability. Nevertheless, due to significant pH changes in the reacting system, the reusability of the enzyme is better retained in the physical coating and solvent-physical coating co-modification methods.
{"title":"Urease stabilization in urea–urease–H+ system and its influence on the clock reaction dynamics","authors":"Dan Yang, Hua Zhang, Fengyi Cao, Sijia Chang, Guihao Tan, Lin Ji","doi":"10.1002/kin.21725","DOIUrl":"10.1002/kin.21725","url":null,"abstract":"<p>The inherent autocatalytic kinetics of the urea–urease–H<sup>+</sup> system positions it as a promising candidate for the design of dynamic materials with time-domain programmable functions. Nevertheless, the stability of the enzyme can markedly influence the temporal evolution dynamics of the system and curtail its widespread applicability. This work employs several kinds of enzyme stabilization methods, including chemical cross-linking, physical coating, solvent stabilization, and solvent-physical coating co-modification, to systematically explore the impact of enzyme stabilization on clock reaction dynamics. Extensive experimental tests and analysis indicate that solvent and chemical cross-linking stabilization methods can better preserve clock dynamics with sensitive switching ability. Nevertheless, due to significant pH changes in the reacting system, the reusability of the enzyme is better retained in the physical coating and solvent-physical coating co-modification methods.</p>","PeriodicalId":13894,"journal":{"name":"International Journal of Chemical Kinetics","volume":null,"pages":null},"PeriodicalIF":1.5,"publicationDate":"2024-04-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140591283","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The periodic sinc function interpolation offers a compelling solution to address the issue of noise in the analysis of thermogravimetric analysis (TGA) data, thereby enhancing the outcomes of differential techniques such as the Friedman isoconversional method. In this study, we introduce a novel approach that leverages the periodic sinc function interpolation to directly obtain smooth reaction rates from TGA data, eliminating the reliance on numerical differentiation methods. The efficacy of this method has been confirmed through its application to noisy experimental data derived from the thermal decomposition of various polymers, showcasing its robustness. Readers are provided with the corresponding code for Gnu Octave, serving as a free alternative to MATLAB. Additionally, the activation energies calculated from the experimental data using both the Friedman method and periodic sinc function interpolation closely align with those determined by the integral Vyazovkin method, emphasizing the validity and reliability of this new approach.
{"title":"Evaluation of reaction rate of thermogravimetric analysis data using periodic sinc function interpolation","authors":"Alireza Aghili, Amir Hossein Shabani","doi":"10.1002/kin.21724","DOIUrl":"10.1002/kin.21724","url":null,"abstract":"<p>The periodic sinc function interpolation offers a compelling solution to address the issue of noise in the analysis of thermogravimetric analysis (TGA) data, thereby enhancing the outcomes of differential techniques such as the Friedman isoconversional method. In this study, we introduce a novel approach that leverages the periodic sinc function interpolation to directly obtain smooth reaction rates from TGA data, eliminating the reliance on numerical differentiation methods. The efficacy of this method has been confirmed through its application to noisy experimental data derived from the thermal decomposition of various polymers, showcasing its robustness. Readers are provided with the corresponding code for Gnu Octave, serving as a free alternative to MATLAB. Additionally, the activation energies calculated from the experimental data using both the Friedman method and periodic sinc function interpolation closely align with those determined by the integral Vyazovkin method, emphasizing the validity and reliability of this new approach.</p>","PeriodicalId":13894,"journal":{"name":"International Journal of Chemical Kinetics","volume":null,"pages":null},"PeriodicalIF":1.5,"publicationDate":"2024-04-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140591281","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Felix Schmalz, Wassja A. Kopp, Eirini Goudeli, Kai Leonhard
Creation of complex chemical mechanisms for hydrocarbon pyrolysis and combustion is challenging due to the large number of species and reactions involved. Reactive molecular dynamics (RMD) enables the simulation of thousands of reactions and the discovery of previously unknown components of the reaction network. However, due to the inherent imprecision of reactive force fields, it is necessary to verify RMD-obtained reaction paths using more accurate methods such as Density Functional Theory (DFT). We demonstrate a method for identification and confirmation of reaction pathways from RMD that supplement an established mechanism, using the example of benzene formation from n-heptane and iso-octane pyrolysis. We establish a validation workflow to extract reaction geometries from RMD and optimize transition states using the Nudged-Elastic-Band method on semi-empirical and quantum mechanical levels of theory. Our findings demonstrate that the widely recognized ReaxFF parameterization, CHO2016, can identify known pathways from a established soot formation mechanism while also indicating new ones. We also show that CHO2016 underestimates hydrogen migration barriers by up to