Pub Date : 2026-03-20DOI: 10.1016/j.ijid.2026.108536
Francesca Saluzzo, Olof Lindahl, Leonid Chindelevitch, Till T Bachmann, Dominik M Meinel, Cihan Papan, Konstantinos Mitsakakis, Valentina Di Gregori, Khine Swe Swe-Han, Kevin M Krause, Betsy Wonderly Trainor, Nico T Mutters, Volkan Özenci, Daniela Maria Cirillo, Chantal M Morel
Background: Effective care for bacterial infections requires both new antibiotics (ABx) to address antimicrobial resistance (AMR) and appropriate diagnostics (Dx) to guide their use. Diagnostics are essential to identify pathogens, determine susceptibility, and support targeted prescribing, including ruling out unnecessary antibiotic use. However, diagnostics are undervalued in the current market, limiting their availability and integration with antibiotic development.
Aim: To examine the interplay between antibiotics and diagnostics and assess the potential value of coordinated development and partnerships.
Methods: This paper analyses the antibiotic and diagnostic development landscape, focusing on market dynamics, regulatory frameworks, and collaboration models involving ABx developers, Dx developers, clinicians, and public-sector stakeholders.
Results: Antibiotics and diagnostics are rarely developed or introduced in parallel, and available diagnostics often fail to deliver treatment-focused or point-of-care-relevant results. This misalignment hampers the effective deployment of new antibiotics and weakens stewardship. Cross-technology partnerships can improve trial efficiency, enhance market valuation, and support more targeted antibiotic use. Key barriers include fragmented incentives, regulatory misalignment, and financial constraints.
Conclusion: Better alignment between antibiotic and diagnostic development is critical to maximise clinical impact and support resistance monitoring. Public-sector support could help enable effective partnerships and improve patient outcomes.
{"title":"When the whole exceeds the sum of its parts: Squeezing greater cumulative benefit from cross-technology partnerships in bacterial infection.","authors":"Francesca Saluzzo, Olof Lindahl, Leonid Chindelevitch, Till T Bachmann, Dominik M Meinel, Cihan Papan, Konstantinos Mitsakakis, Valentina Di Gregori, Khine Swe Swe-Han, Kevin M Krause, Betsy Wonderly Trainor, Nico T Mutters, Volkan Özenci, Daniela Maria Cirillo, Chantal M Morel","doi":"10.1016/j.ijid.2026.108536","DOIUrl":"https://doi.org/10.1016/j.ijid.2026.108536","url":null,"abstract":"<p><strong>Background: </strong>Effective care for bacterial infections requires both new antibiotics (ABx) to address antimicrobial resistance (AMR) and appropriate diagnostics (Dx) to guide their use. Diagnostics are essential to identify pathogens, determine susceptibility, and support targeted prescribing, including ruling out unnecessary antibiotic use. However, diagnostics are undervalued in the current market, limiting their availability and integration with antibiotic development.</p><p><strong>Aim: </strong>To examine the interplay between antibiotics and diagnostics and assess the potential value of coordinated development and partnerships.</p><p><strong>Methods: </strong>This paper analyses the antibiotic and diagnostic development landscape, focusing on market dynamics, regulatory frameworks, and collaboration models involving ABx developers, Dx developers, clinicians, and public-sector stakeholders.</p><p><strong>Results: </strong>Antibiotics and diagnostics are rarely developed or introduced in parallel, and available diagnostics often fail to deliver treatment-focused or point-of-care-relevant results. This misalignment hampers the effective deployment of new antibiotics and weakens stewardship. Cross-technology partnerships can improve trial efficiency, enhance market valuation, and support more targeted antibiotic use. Key barriers include fragmented incentives, regulatory misalignment, and financial constraints.</p><p><strong>Conclusion: </strong>Better alignment between antibiotic and diagnostic development is critical to maximise clinical impact and support resistance monitoring. Public-sector support could help enable effective partnerships and improve patient outcomes.</p>","PeriodicalId":14006,"journal":{"name":"International Journal of Infectious Diseases","volume":" ","pages":"108536"},"PeriodicalIF":4.3,"publicationDate":"2026-03-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147498687","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-20DOI: 10.1016/j.ijid.2026.108538
Ya-Jen Yang, Meng-Rui Lee, Che-Liang Chung, Sung-Ching Pan, Chia-Ping Ku, Tien-Yu Tsai, Chi-Yu Liao, Jann-Yuan Wang, Chi-Tai Fang, Jann-Tay Wang
Objectives: Despite the availability of rapid tuberculosis (TB) nucleic acid amplification (NAA) testing, prevention of TB transmission within healthcare facilities remains a challenge due to ongoing difficulties in promptly isolating infectious TB cases upon hospitalization.
Methods: We reviewed all hospitalized sputum culture-positive TB patients who were not immediately placed in airborne isolation before anti-TB treatment at a high caseload medical center in Taiwan during 2016-2019, and applied root cause analysis to systematically identify structural barriers to prompt isolation.
Results: Among 235 cases, 95 (40.4%) had non-suggestive chest radiography (CXR) findings (Category 1), 62 (26.4%) had suggestive findings but sputum testing was delayed (≥3 days; Category 2), and 78 (33.2%) had timely sputum testing but delayed positive results (Category 3,). In Category 1, 52.6% later developed typical CXR findings. In Category 2, 72.6% had misread CXRs and 27.4% had delayed review. In Category 3 (65.4% had sputum result turnaround time >3 days), TB-NAA test was not done in 24 (30.8%) patients (1 smear-positive and 23 smear-negative). Of the 13 false-negative TB-NAA cases, only one had repeat NAA testing.
Conclusions: Prompt isolation requires clinical alertness, accurate CXR interpretations, frontline TB-NAA, and repeat testing when suspicion persists despite negative results.
{"title":"Nosocomial Tuberculosis Exposure Events in the Era of Nucleic Acid Amplification Testing: A Root Cause Analysis.","authors":"Ya-Jen Yang, Meng-Rui Lee, Che-Liang Chung, Sung-Ching Pan, Chia-Ping Ku, Tien-Yu Tsai, Chi-Yu Liao, Jann-Yuan Wang, Chi-Tai Fang, Jann-Tay Wang","doi":"10.1016/j.ijid.2026.108538","DOIUrl":"https://doi.org/10.1016/j.ijid.2026.108538","url":null,"abstract":"<p><strong>Objectives: </strong>Despite the availability of rapid tuberculosis (TB) nucleic acid amplification (NAA) testing, prevention of TB transmission within healthcare facilities remains a challenge due to ongoing difficulties in promptly isolating infectious TB cases upon hospitalization.</p><p><strong>Methods: </strong>We reviewed all hospitalized sputum culture-positive TB patients who were not immediately placed in airborne isolation before anti-TB treatment at a high caseload medical center in Taiwan during 2016-2019, and applied root cause analysis to systematically identify structural barriers to prompt isolation.</p><p><strong>Results: </strong>Among 235 cases, 95 (40.4%) had non-suggestive chest radiography (CXR) findings (Category 1), 62 (26.4%) had suggestive findings but sputum testing was delayed (≥3 days; Category 2), and 78 (33.2%) had timely sputum testing but delayed positive results (Category 3,). In Category 1, 52.6% later developed typical CXR findings. In Category 2, 72.6% had misread CXRs and 27.4% had delayed review. In Category 3 (65.4% had sputum result turnaround time >3 days), TB-NAA test was not done in 24 (30.8%) patients (1 smear-positive and 23 smear-negative). Of the 13 false-negative TB-NAA cases, only one had repeat NAA testing.</p><p><strong>Conclusions: </strong>Prompt isolation requires clinical alertness, accurate CXR interpretations, frontline TB-NAA, and repeat testing when suspicion persists despite negative results.</p>","PeriodicalId":14006,"journal":{"name":"International Journal of Infectious Diseases","volume":" ","pages":"108538"},"PeriodicalIF":4.3,"publicationDate":"2026-03-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147498656","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-19DOI: 10.1016/j.ijid.2026.108554
Pablo Ciudad-Gutiérrez, Paloma Suárez-Casillas, Laura Herrera-Hidalgo, Marta Mejías-Trueba, María José Muñoz-Vilches, Olaf Neth, Marta Moleón-Ruiz, Flora López-González, María Victoria Gil-Navarro, Ana Belén Guisado-Gil
Objective: The aim of this study is to guide other investigators in designing and implementing an appropriate pediatric outpatient parenteral antimicrobial therapy program in healthcare settings.
Methods: A systematic review of studies that included a description of outpatient parenteral antimicrobial therapy in children was conducted. A register of the review protocol was carried out in PROSPERO (registration number: CRD420251054490), which followed PRISMA guidelines. The literature search was performed in four healthcare databases (PubMed, EMBASE, Cochrane Library and CINAHL) with no publication date or language restrictions.
Results: A total of 1,764 articles were identified, of which only 37 met the inclusion criteria. Most outpatient parenteral antimicrobial therapy programs were home-based and mainly involved pediatricians and nurses. In terms of clinical results, most programs demonstrated a hospital readmission rate of 0-10% and full antimicrobial therapy completion. In regard to safety, catheter-related infections and neutropenia were the most common complications identified.
Conclusion: Home-based therapy treatment appears to be the most frequently implemented model, associated with reduced healthcare costs and high patient and caregiver satisfaction. This systematic review advances current knowledge by synthesising available evidence on paediatric OPAT program organisation, clinical outcomes, and safety, and by identifying key gaps to inform future program development and standardisation.
{"title":"Outpatient parenteral antimicrobial therapy (OPAT) programs for pediatric patients: a systematic review.","authors":"Pablo Ciudad-Gutiérrez, Paloma Suárez-Casillas, Laura Herrera-Hidalgo, Marta Mejías-Trueba, María José Muñoz-Vilches, Olaf Neth, Marta Moleón-Ruiz, Flora López-González, María Victoria Gil-Navarro, Ana Belén Guisado-Gil","doi":"10.1016/j.ijid.2026.108554","DOIUrl":"https://doi.org/10.1016/j.ijid.2026.108554","url":null,"abstract":"<p><strong>Objective: </strong>The aim of this study is to guide other investigators in designing and implementing an appropriate pediatric outpatient parenteral antimicrobial therapy program in healthcare settings.</p><p><strong>Methods: </strong>A systematic review of studies that included a description of outpatient parenteral antimicrobial therapy in children was conducted. A register of the review protocol was carried out in PROSPERO (registration number: CRD420251054490), which followed PRISMA guidelines. The literature search was performed in four healthcare databases (PubMed, EMBASE, Cochrane Library and CINAHL) with no publication date or language restrictions.</p><p><strong>Results: </strong>A total of 1,764 articles were identified, of which only 37 met the inclusion criteria. Most outpatient parenteral antimicrobial therapy programs were home-based and mainly involved pediatricians and nurses. In terms of clinical results, most programs demonstrated a hospital readmission rate of 0-10% and full antimicrobial therapy completion. In regard to safety, catheter-related infections and neutropenia were the most common complications identified.</p><p><strong>Conclusion: </strong>Home-based therapy treatment appears to be the most frequently implemented model, associated with reduced healthcare costs and high patient and caregiver satisfaction. This systematic review advances current knowledge by synthesising available evidence on paediatric OPAT program organisation, clinical outcomes, and safety, and by identifying key gaps to inform future program development and standardisation.</p>","PeriodicalId":14006,"journal":{"name":"International Journal of Infectious Diseases","volume":" ","pages":"108554"},"PeriodicalIF":4.3,"publicationDate":"2026-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147493957","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-19DOI: 10.1016/j.ijid.2026.108557
Nguyen Trong The, Nguyen Xuan Lam, Nguyen Dinh Luan, Salome Steinke, Do Van Dong, Vu Viet Sang, Le Huu Song, Thirumalaisamy P Velavan
Background: Bacterial meningitis remains a major cause of neurological morbidity and mortality, particularly in low- and middle-income countries. To better characterise the aetiology, clinical features, and prognostic determinants, we conducted a seven-year investigation of adult bacterial meningitis cases admitted to a large tertiary hospital in northern Vietnam.
Methods: A retrospective-prospective observational cohort study was conducted between 2018 and 2024, including adults diagnosed with bacterial meningitis. Clinical characteristics, cerebrospinal fluid (CSF) parameters, culture results, and targeted in-house PCR findings were analysed. Outcomes were assessed using Glasgow Outcome Scale (GOS), with unfavourable outcomes defined as GOS 1-4. Multivariate logistic regression identified independent predictors of mortality and unfavourable outcomes.
Results: Of 232 screened patients, 150 met inclusion criteria. Pathogens were identified in 62 (41%) cases. Streptococcus suis was the predominant pathogen (n=26), followed by Streptococcus pneumoniae (n=10). CSF culture yielded growth in 35% of cases, while PCR detected six additional culture-negative infections. Overall mortality was 5%, and 10% of patients experienced unfavourable outcomes. Independent predictors included alcoholism (unfavourable outcome OR 13.8, 95% CI 2.1-100; mortality OR 16.5, 95% CI 1.9-165), focal neurological deficits (unfavourable outcome OR 41.4, 95% CI 9.2-250; mortality OR 12.8, 95% CI 1.7-123), and altered mental status (OR 8.6, 95% CI 1.5-86).
Conclusions: S. suis remains the leading cause of adult bacterial meningitis in northern Vietnam. Targeted interventions addressing high-risk groups, particularly individuals with alcoholism or neurological deficits at presentation, could improve clinical outcomes.
背景:细菌性脑膜炎仍然是神经系统发病和死亡的主要原因,特别是在低收入和中等收入国家。为了更好地描述病因、临床特征和预后决定因素,我们对越南北部一家大型三级医院收治的成人细菌性脑膜炎病例进行了为期7年的调查。方法:在2018年至2024年间进行了一项回顾性-前瞻性观察队列研究,其中包括诊断为细菌性脑膜炎的成年人。分析临床特征、脑脊液(CSF)参数、培养结果和针对性的内部PCR结果。使用格拉斯哥结果量表(GOS)评估结果,不良结果定义为GOS 1-4。多变量逻辑回归确定了死亡率和不良结局的独立预测因素。结果:在232例筛查患者中,150例符合纳入标准。62例(41%)病例检出致病菌。主要病原菌为猪链球菌(26例),其次为肺炎链球菌(10例)。脑脊液培养在35%的病例中产生生长,而PCR检测到另外6例培养阴性感染。总死亡率为5%,10%的患者出现不良结局。独立预测因素包括酒精中毒(不利结果OR 13.8, 95% CI 2.1-100;死亡率OR 16.5, 95% CI 1.9-165)、局灶性神经功能缺损(不利结果OR 41.4, 95% CI 9.2-250;死亡率OR 12.8, 95% CI 1.7-123)和精神状态改变(OR 8.6, 95% CI 1.5-86)。结论:猪链球菌仍然是越南北部成人细菌性脑膜炎的主要原因。针对高危人群的针对性干预措施,特别是有酗酒或出现神经缺陷的个体,可以改善临床结果。
{"title":"Predictors of Mortality and Clinical Outcomes in Adult Bacterial Meningitis in Northern Vietnam: A Seven-Year Cohort Analysis.","authors":"Nguyen Trong The, Nguyen Xuan Lam, Nguyen Dinh Luan, Salome Steinke, Do Van Dong, Vu Viet Sang, Le Huu Song, Thirumalaisamy P Velavan","doi":"10.1016/j.ijid.2026.108557","DOIUrl":"https://doi.org/10.1016/j.ijid.2026.108557","url":null,"abstract":"<p><strong>Background: </strong>Bacterial meningitis remains a major cause of neurological morbidity and mortality, particularly in low- and middle-income countries. To better characterise the aetiology, clinical features, and prognostic determinants, we conducted a seven-year investigation of adult bacterial meningitis cases admitted to a large tertiary hospital in northern Vietnam.</p><p><strong>Methods: </strong>A retrospective-prospective observational cohort study was conducted between 2018 and 2024, including adults diagnosed with bacterial meningitis. Clinical characteristics, cerebrospinal fluid (CSF) parameters, culture results, and targeted in-house PCR findings were analysed. Outcomes were assessed using Glasgow Outcome Scale (GOS), with unfavourable outcomes defined as GOS 1-4. Multivariate logistic regression identified independent predictors of mortality and unfavourable outcomes.</p><p><strong>Results: </strong>Of 232 screened patients, 150 met inclusion criteria. Pathogens were identified in 62 (41%) cases. Streptococcus suis was the predominant pathogen (n=26), followed by Streptococcus pneumoniae (n=10). CSF culture yielded growth in 35% of cases, while PCR detected six additional culture-negative infections. Overall mortality was 5%, and 10% of patients experienced unfavourable outcomes. Independent predictors included alcoholism (unfavourable outcome OR 13.8, 95% CI 2.1-100; mortality OR 16.5, 95% CI 1.9-165), focal neurological deficits (unfavourable outcome OR 41.4, 95% CI 9.2-250; mortality OR 12.8, 95% CI 1.7-123), and altered mental status (OR 8.6, 95% CI 1.5-86).</p><p><strong>Conclusions: </strong>S. suis remains the leading cause of adult bacterial meningitis in northern Vietnam. Targeted interventions addressing high-risk groups, particularly individuals with alcoholism or neurological deficits at presentation, could improve clinical outcomes.</p>","PeriodicalId":14006,"journal":{"name":"International Journal of Infectious Diseases","volume":" ","pages":"108557"},"PeriodicalIF":4.3,"publicationDate":"2026-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147494033","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-19DOI: 10.1016/j.ijid.2026.108556
Jingwen Li, Jiaying Shi, Yi Chen, Ruichuan Xie, Wenbin Wan, Kan Wang, Hongda Shao, Jianjun Liu, Gang Wang, Li Gao
Background: Varicella-zoster virus (VZV) encephalitis typically presents with lymphocytic pleocytosis and mild-to-moderate elevation of cerebrospinal fluid (CSF) protein. Markedly elevated CSF protein concentrations and high viral loads are uncommon, particularly in immunocompetent individuals, and their clinical implications remain poorly defined.
Case presentation: We reported a 67-year-old immunocompetent woman with VZV encephalitis who exhibited an extremely elevated CSF protein level (12.31 g/L) and a high CSF VZV viral load detected in CSF by next-generation sequencing. Neuroimaging revealed multifocal encephalitic lesions complicated by cerebral infarction and hemorrhage. The patient received standard antiviral and supportive management, with gradual clinical stabilization and marked improvement in CSF parameters. However, she developed delayed-onset hydrocephalus during the follow-up and underwent ventriculoperitoneal shunting, after which sustained neurological recovery was achieved.
Conclusions: This case broadens the spectrum of recognized CSF abnormalities in VZV encephalitis and underscores delayed hydrocephalus as a clinically important complication, even following apparent clinical and biochemical improvement. Prolonged surveillance may therefore be warranted in patients with severe VZV-related central nervous system infection.
{"title":"Severe Varicella-Zoster Virus Encephalitis with Extreme Cerebrospinal Fluid Protein Elevation and Delayed Hydrocephalus in an Immunocompetent Patient in Shanghai.","authors":"Jingwen Li, Jiaying Shi, Yi Chen, Ruichuan Xie, Wenbin Wan, Kan Wang, Hongda Shao, Jianjun Liu, Gang Wang, Li Gao","doi":"10.1016/j.ijid.2026.108556","DOIUrl":"https://doi.org/10.1016/j.ijid.2026.108556","url":null,"abstract":"<p><strong>Background: </strong>Varicella-zoster virus (VZV) encephalitis typically presents with lymphocytic pleocytosis and mild-to-moderate elevation of cerebrospinal fluid (CSF) protein. Markedly elevated CSF protein concentrations and high viral loads are uncommon, particularly in immunocompetent individuals, and their clinical implications remain poorly defined.</p><p><strong>Case presentation: </strong>We reported a 67-year-old immunocompetent woman with VZV encephalitis who exhibited an extremely elevated CSF protein level (12.31 g/L) and a high CSF VZV viral load detected in CSF by next-generation sequencing. Neuroimaging revealed multifocal encephalitic lesions complicated by cerebral infarction and hemorrhage. The patient received standard antiviral and supportive management, with gradual clinical stabilization and marked improvement in CSF parameters. However, she developed delayed-onset hydrocephalus during the follow-up and underwent ventriculoperitoneal shunting, after which sustained neurological recovery was achieved.</p><p><strong>Conclusions: </strong>This case broadens the spectrum of recognized CSF abnormalities in VZV encephalitis and underscores delayed hydrocephalus as a clinically important complication, even following apparent clinical and biochemical improvement. Prolonged surveillance may therefore be warranted in patients with severe VZV-related central nervous system infection.</p>","PeriodicalId":14006,"journal":{"name":"International Journal of Infectious Diseases","volume":" ","pages":"108556"},"PeriodicalIF":4.3,"publicationDate":"2026-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147494022","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Objective: This study aimed to determine the accuracy of metagenomic next-generation sequencing (mNGS) in diagnosing non-tuberculous mycobacteria (NTM) osteoarticular infection (OAI) and compare it with mycobacteria growth indicator tube (MGIT) culture.
Methods: This study was conducted on 193 patients with suspected NTM OAI treated from January 2019 to July 2022 at the Beijing Chest Hospital, Capital Medical University, Yantai Qishan Hospital or The Fourth People's Hospital of Nanning who had mNGS assay and MGIT culture results. Clinical comprehensive diagnosis was taken as the "gold standard". We investigated the diagnostic sensitivity, specificity, predictive value, and likelihood ratio of these tests.
Results: Of the 193 patients, 26 (13.47%) were diagnosed with NTM OAI, and 167 (86.53%) had non-NTM OAI. Compared to the MGIT culture results, mNGS showed higher sensitivity (100.0% vs. 7.7%), specificity (99.4% vs. 80.2%), positive predictive value (96.3% vs. 5.7%), negative predictive value (100.0% vs. 84.8%), positive likelihood ratio (167.000 vs. 0.389) and negative likelihood ratio (0.000 vs. 1.150). The area under the curve of the mNGS assay was 0.997 (95% confidence interval, 0.990-1.000).
Conclusions: The mNGS assay had greater diagnostic accuracy than the MGIT culture in patients with suspected NTM OAI.
目的:探讨新一代宏基因组测序(mNGS)诊断非结核分枝杆菌(NTM)骨关节感染(OAI)的准确性,并与分枝杆菌生长指示管(MGIT)培养进行比较。方法:对2019年1月至2022年7月在北京胸科医院、首都医科大学、烟台岐山医院或南宁市第四人民医院就诊的193例疑似NTM OAI患者进行mNGS检测和MGIT培养。以临床综合诊断为“金标准”。我们研究了这些检测的诊断敏感性、特异性、预测值和似然比。结果:193例患者中,NTM OAI 26例(13.47%),非NTM OAI 167例(86.53%)。与MGIT培养结果相比,mNGS的敏感性(100.0% vs. 7.7%)、特异性(99.4% vs. 80.2%)、阳性预测值(96.3% vs. 5.7%)、阴性预测值(100.0% vs. 84.8%)、阳性似然比(167.000 vs. 0.389)和阴性似然比(0.000 vs. 1.150)更高。mNGS法的曲线下面积为0.997(95%可信区间0.990 ~ 1.000)。结论:在疑似NTM OAI患者中,mNGS检测比MGIT培养具有更高的诊断准确性。
{"title":"The Clinical Diagnostic Value of Metagenomic Next-Generation Sequencing for Patients with Suspected Nontuberculous Mycobacterial Osteoarticular Infection: A National Multicenter Clinical Cohort.","authors":"Xueyu Wang, Yujin Wang, Guangxuan Yan, Naihui Chu, Hairong Huang, Wenjuan Nie","doi":"10.1016/j.ijid.2026.108578","DOIUrl":"https://doi.org/10.1016/j.ijid.2026.108578","url":null,"abstract":"<p><strong>Objective: </strong>This study aimed to determine the accuracy of metagenomic next-generation sequencing (mNGS) in diagnosing non-tuberculous mycobacteria (NTM) osteoarticular infection (OAI) and compare it with mycobacteria growth indicator tube (MGIT) culture.</p><p><strong>Methods: </strong>This study was conducted on 193 patients with suspected NTM OAI treated from January 2019 to July 2022 at the Beijing Chest Hospital, Capital Medical University, Yantai Qishan Hospital or The Fourth People's Hospital of Nanning who had mNGS assay and MGIT culture results. Clinical comprehensive diagnosis was taken as the \"gold standard\". We investigated the diagnostic sensitivity, specificity, predictive value, and likelihood ratio of these tests.</p><p><strong>Results: </strong>Of the 193 patients, 26 (13.47%) were diagnosed with NTM OAI, and 167 (86.53%) had non-NTM OAI. Compared to the MGIT culture results, mNGS showed higher sensitivity (100.0% vs. 7.7%), specificity (99.4% vs. 80.2%), positive predictive value (96.3% vs. 5.7%), negative predictive value (100.0% vs. 84.8%), positive likelihood ratio (167.000 vs. 0.389) and negative likelihood ratio (0.000 vs. 1.150). The area under the curve of the mNGS assay was 0.997 (95% confidence interval, 0.990-1.000).</p><p><strong>Conclusions: </strong>The mNGS assay had greater diagnostic accuracy than the MGIT culture in patients with suspected NTM OAI.</p>","PeriodicalId":14006,"journal":{"name":"International Journal of Infectious Diseases","volume":" ","pages":"108578"},"PeriodicalIF":4.3,"publicationDate":"2026-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147494045","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Objectives: Fecal microbiota transplantation (FMT) is an established treatment for recurrent Clostridioides difficile infection (rCDI). However, the detection of Blastocystis spp. in potential donors remains controversial and often leads to donor exclusion, despite uncertain pathogenicity. This review aims to critically evaluate the available evidence on Blastocystis spp. transmission through FMT, its clinical impact, and the implications of current donor screening strategies.
Methods: A narrative review of the literature was performed using PubMed, Embase, and Web of Science. Studies reporting Blastocystis spp. detection in FMT donors or recipients, transmission events, clinical outcomes, diagnostic methods, and microbiome associations were included and analyzed.
Results: Across published reports, 34 FMT recipients were exposed to Blastocystis spp.-positive donor material. Transmission was limited to common subtypes (ST1-ST3), was transient, and was not associated with adverse clinical outcomes or reduced efficacy of FMT for rCDI. No cases of symptomatic infection were reported. Frozen stool preparations appeared to abolish parasite viability. Molecular screening methods markedly increased detection rates compared with microscopy, frequently identifying low-burden colonization of uncertain clinical relevance. Available data suggest that Blastocystis spp. carriage may coexist with a healthy microbiome and does not negatively impact FMT outcomes.
Conclusions: Current evidence indicates that Blastocystis spp. transmission through FMT in immunocompetent adults is clinically benign. Routine donor exclusion based solely on Blastocystis spp. detection may therefore be overly restrictive. A risk-based approach incorporating parasite burden, subtype, host factors, and processing methods may better balance patient safety with donor availability, supporting more sustainable FMT programs.
目的:粪便微生物群移植(FMT)是治疗复发性艰难梭菌感染(rCDI)的一种有效方法。然而,在潜在供体中检测囊虫仍然存在争议,尽管致病性不确定,但往往导致供体排斥。本综述旨在批判性地评估囊虫通过FMT传播的现有证据,其临床影响以及当前供体筛选策略的意义。方法:使用PubMed、Embase和Web of Science对文献进行叙述性回顾。研究报告了在FMT供体或受体中检测囊虫,传播事件,临床结果,诊断方法和微生物组相关性。结果:在已发表的报告中,34名FMT受体暴露于囊虫spp阳性的供体材料。传播仅限于常见亚型(ST1-ST3),是短暂的,与不良临床结果或FMT治疗rCDI的疗效降低无关。无症状感染病例报告。冷冻粪便制剂似乎可以消除寄生虫的生存能力。与显微镜相比,分子筛选方法显著提高了检出率,经常发现临床相关性不确定的低负担定植。现有数据表明,囊虫携带可能与健康的微生物群共存,不会对FMT结果产生负面影响。结论:目前的证据表明,囊虫在免疫功能正常的成年人中通过FMT传播在临床上是良性的。因此,仅仅根据囊胚孢子虫的检测,常规的供体排除可能过于严格。结合寄生虫负担、亚型、宿主因素和处理方法的基于风险的方法可能更好地平衡患者安全和供体可用性,支持更可持续的FMT项目。
{"title":"Blastocystis spp. in Fecal Microbiota Transplantation: Evidence, Policy, and the Screening Paradox.","authors":"Simone Melchiorri, Valeria Michela Besutti, Ignazio Castagliuolo","doi":"10.1016/j.ijid.2026.108548","DOIUrl":"https://doi.org/10.1016/j.ijid.2026.108548","url":null,"abstract":"<p><strong>Objectives: </strong>Fecal microbiota transplantation (FMT) is an established treatment for recurrent Clostridioides difficile infection (rCDI). However, the detection of Blastocystis spp. in potential donors remains controversial and often leads to donor exclusion, despite uncertain pathogenicity. This review aims to critically evaluate the available evidence on Blastocystis spp. transmission through FMT, its clinical impact, and the implications of current donor screening strategies.</p><p><strong>Methods: </strong>A narrative review of the literature was performed using PubMed, Embase, and Web of Science. Studies reporting Blastocystis spp. detection in FMT donors or recipients, transmission events, clinical outcomes, diagnostic methods, and microbiome associations were included and analyzed.</p><p><strong>Results: </strong>Across published reports, 34 FMT recipients were exposed to Blastocystis spp.-positive donor material. Transmission was limited to common subtypes (ST1-ST3), was transient, and was not associated with adverse clinical outcomes or reduced efficacy of FMT for rCDI. No cases of symptomatic infection were reported. Frozen stool preparations appeared to abolish parasite viability. Molecular screening methods markedly increased detection rates compared with microscopy, frequently identifying low-burden colonization of uncertain clinical relevance. Available data suggest that Blastocystis spp. carriage may coexist with a healthy microbiome and does not negatively impact FMT outcomes.</p><p><strong>Conclusions: </strong>Current evidence indicates that Blastocystis spp. transmission through FMT in immunocompetent adults is clinically benign. Routine donor exclusion based solely on Blastocystis spp. detection may therefore be overly restrictive. A risk-based approach incorporating parasite burden, subtype, host factors, and processing methods may better balance patient safety with donor availability, supporting more sustainable FMT programs.</p>","PeriodicalId":14006,"journal":{"name":"International Journal of Infectious Diseases","volume":" ","pages":"108548"},"PeriodicalIF":4.3,"publicationDate":"2026-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147493871","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-19DOI: 10.1016/j.ijid.2026.108559
Yingqi Xu, Ee Chern Kwek, Keith Teo Ee Gene, Edwin Philip Conceicao, Jean Xiang Ying Sim, Shalvi Arora, Indumathi Venkatachalam, Sze Ling Chan
Objectives: This study aimed to determine the proportion of patients admitted "for" and "with" COVID-19 and to compare their characteristics.
Methods: This was a retrospective cohort study using data from the cluster-wide COVID-19 registry from January 2020 to December 2022. Characteristics of admissions 'for' and 'with' COVID-19 were compared using the Wilcoxon rank-sum test or the Chi-square test, as appropriate.
Results: Of 28,538 COVID-19-related admissions, 9,539 (33.4%) were classified as 'for' COVID-19 and 18,999 (66.6%) as 'with' COVID-19. Compared to patients admitted 'with' COVID-19, those admitted 'for' COVID-19 were significantly older (median (IQR): 71 (54 - 82) vs. 34 (4 - 60) years, p < 2.2 × 10⁻¹⁶), tended to be male (59.0% vs. 51.7%, p < 2.2 × 10⁻¹⁶) and had more comorbidities (proportion with ≥3 comorbidities: 41.7% vs. 15.1%, p < 2.2 × 10⁻¹⁶). Admissions 'for' COVID-19 were also associated with poorer outcomes compared to admissions 'with COVID-19, with higher Intensive Care Unit (ICU) admission (5.1% vs. 0.9%, p < 2.2 × 10⁻¹⁶) and mortality rates (6.1% vs. 0.7%, p < 2.2 × 10⁻¹⁶).
Conclusion: Our findings also highlighted the demographic and clinical differences between the two groups, emphasizing the importance of distinguishing between admission types when evaluating disease burden and allocating healthcare resources.
{"title":"Trends and Outcomes of COVID-19 Hospital Admissions 'For' vs. 'With' COVID-19 in Singapore: A Retrospective Cohort Study using the SingHealth COVID-19 Registry.","authors":"Yingqi Xu, Ee Chern Kwek, Keith Teo Ee Gene, Edwin Philip Conceicao, Jean Xiang Ying Sim, Shalvi Arora, Indumathi Venkatachalam, Sze Ling Chan","doi":"10.1016/j.ijid.2026.108559","DOIUrl":"https://doi.org/10.1016/j.ijid.2026.108559","url":null,"abstract":"<p><strong>Objectives: </strong>This study aimed to determine the proportion of patients admitted \"for\" and \"with\" COVID-19 and to compare their characteristics.</p><p><strong>Methods: </strong>This was a retrospective cohort study using data from the cluster-wide COVID-19 registry from January 2020 to December 2022. Characteristics of admissions 'for' and 'with' COVID-19 were compared using the Wilcoxon rank-sum test or the Chi-square test, as appropriate.</p><p><strong>Results: </strong>Of 28,538 COVID-19-related admissions, 9,539 (33.4%) were classified as 'for' COVID-19 and 18,999 (66.6%) as 'with' COVID-19. Compared to patients admitted 'with' COVID-19, those admitted 'for' COVID-19 were significantly older (median (IQR): 71 (54 - 82) vs. 34 (4 - 60) years, p < 2.2 × 10⁻¹⁶), tended to be male (59.0% vs. 51.7%, p < 2.2 × 10⁻¹⁶) and had more comorbidities (proportion with ≥3 comorbidities: 41.7% vs. 15.1%, p < 2.2 × 10⁻¹⁶). Admissions 'for' COVID-19 were also associated with poorer outcomes compared to admissions 'with COVID-19, with higher Intensive Care Unit (ICU) admission (5.1% vs. 0.9%, p < 2.2 × 10⁻¹⁶) and mortality rates (6.1% vs. 0.7%, p < 2.2 × 10⁻¹⁶).</p><p><strong>Conclusion: </strong>Our findings also highlighted the demographic and clinical differences between the two groups, emphasizing the importance of distinguishing between admission types when evaluating disease burden and allocating healthcare resources.</p>","PeriodicalId":14006,"journal":{"name":"International Journal of Infectious Diseases","volume":" ","pages":"108559"},"PeriodicalIF":4.3,"publicationDate":"2026-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147493962","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-19DOI: 10.1016/j.ijid.2026.108542
Rajendra A, Fletcher Gj, Demosthenes Jp, Thangavelu P, Ghale Bc, Kannangai R, Ramesh Ms, Rupali P
Background & aim: Paradoxical reactions (PR) in HIV-negative tuberculosis is not well understood. This study aimed to determine incidence, clinical and immunological predictors of paradoxical reactions.
Methods: Patients with tuberculous lymphadenitis (TBLN) on anti-tuberculous therapy (ATT) were monitored for PR. Clinical, histopathological, microbiological, and immunological parameters of PR (n=10) and no PR (n=66) groups were analysed at baseline, 2 months and 6 months. Peripheral blood mononuclear cells from paradoxical reaction (n=9) and no paradoxical reaction (n=13) patients were stimulated with TB-ESAT peptide, and mRNA expressions of cytokines (IL-4, IL-10, IL-12, TNF-α, IFN-γ) and transcription factors (T-bet, GATA-3) were quantified.
Results: PR incidence was 5.7% (4/70); six patients presented with PR at baseline. The mean paradoxical reaction onset was 3.25 months. Absence of necrosis at baseline was protective (OR: 0.069; p=0.039). IL-10 mRNA at 2 months and IL-12 mRNA at 6 months increased in the PR compared to no PR group (p=0.05). In PR group, only baseline T-bet mRNA correlated with IFN-γ (r=0.79, p<0.01) but TNF-α correlated at baseline and 2 months (r=0.97, p<0.000; r=0.86, p<0.002). In no PR, T-bet mRNA correlated with IFN-γ and TNF-α at all time points (p<0.05), while GATA-3 mRNA correlated with IL-4 and IL-10 at 2 and 6 months (p<0.05).
Conclusion: Differential Th1/Th2 regulation driven by transcriptional factors alters cytokine expression, influencing paradoxical reaction. Further transcriptomic/proteomic studies are needed to elucidate immune mechanisms.
{"title":"Paradoxical reactions in patients with tuberculous lymphadenitis - a pilot immunopathogenic study.","authors":"Rajendra A, Fletcher Gj, Demosthenes Jp, Thangavelu P, Ghale Bc, Kannangai R, Ramesh Ms, Rupali P","doi":"10.1016/j.ijid.2026.108542","DOIUrl":"https://doi.org/10.1016/j.ijid.2026.108542","url":null,"abstract":"<p><strong>Background & aim: </strong>Paradoxical reactions (PR) in HIV-negative tuberculosis is not well understood. This study aimed to determine incidence, clinical and immunological predictors of paradoxical reactions.</p><p><strong>Methods: </strong>Patients with tuberculous lymphadenitis (TBLN) on anti-tuberculous therapy (ATT) were monitored for PR. Clinical, histopathological, microbiological, and immunological parameters of PR (n=10) and no PR (n=66) groups were analysed at baseline, 2 months and 6 months. Peripheral blood mononuclear cells from paradoxical reaction (n=9) and no paradoxical reaction (n=13) patients were stimulated with TB-ESAT peptide, and mRNA expressions of cytokines (IL-4, IL-10, IL-12, TNF-α, IFN-γ) and transcription factors (T-bet, GATA-3) were quantified.</p><p><strong>Results: </strong>PR incidence was 5.7% (4/70); six patients presented with PR at baseline. The mean paradoxical reaction onset was 3.25 months. Absence of necrosis at baseline was protective (OR: 0.069; p=0.039). IL-10 mRNA at 2 months and IL-12 mRNA at 6 months increased in the PR compared to no PR group (p=0.05). In PR group, only baseline T-bet mRNA correlated with IFN-γ (r=0.79, p<0.01) but TNF-α correlated at baseline and 2 months (r=0.97, p<0.000; r=0.86, p<0.002). In no PR, T-bet mRNA correlated with IFN-γ and TNF-α at all time points (p<0.05), while GATA-3 mRNA correlated with IL-4 and IL-10 at 2 and 6 months (p<0.05).</p><p><strong>Conclusion: </strong>Differential Th1/Th2 regulation driven by transcriptional factors alters cytokine expression, influencing paradoxical reaction. Further transcriptomic/proteomic studies are needed to elucidate immune mechanisms.</p>","PeriodicalId":14006,"journal":{"name":"International Journal of Infectious Diseases","volume":" ","pages":"108542"},"PeriodicalIF":4.3,"publicationDate":"2026-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147494030","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-19DOI: 10.1016/j.ijid.2026.108574
Blair Merrick, Benjamin H Mullish, Simon D Goldenberg, Sahil Khanna, Vineet Ahuja, Christian Lodberg Hvas, Govind K Makharia, Horace R T Williams
Background: Faecal microbiota transplant (FMT) is an effective therapy for recurrent Clostridioides difficile infection (CDI); its use is increasingly being investigated for other indications. Although regional surveys and national registries have provided insight into local practices, a comprehensive global overview of FMT access, implementation and governance is lacking.
Methods: A survey regarding key aspects related to FMT use was disseminated electronically to members of the World Gastroenterology Organisation, European FMT Network, and International Society of Infectious Diseases. Responses were analysed both descriptively and using appropriate statistical methods.
Findings: 80 responses were obtained from 55 countries. FMT was available in significantly more Tier 1/2, than Tier 3/4, nations (24/28 vs 8/27; p<0.001). In countries lacking access to FMT reasons included: lack of expertise/infrastructure; financial constraints; regulatory uncertainty; and perceived lack of clinical need. Most countries using FMT employed both upper and lower gastrointestinal administration routes; 18/32 (56%) used capsulised FMT. Almost all countries with access to FMT used it to treat CDI, albeit with different thresholds for the number of CDI episodes prior to use. There were many non-CDI indications for FMT in current use. Payment for stool donation was reported by 10 countries.
Interpretation: This is the first global overview of FMT availability and governance, highlighting substantial international inequities and considerable heterogeneity in regulation, clinical use, donor screening, and cost. Standardisation of practice and targeted support for lower income countries is needed to ensure equitable access and to promote safe, high-quality delivery as FMT and microbiome-based therapeutics continue to evolve.
{"title":"A global evaluation of the use of faecal microbiota transplant (FMT).","authors":"Blair Merrick, Benjamin H Mullish, Simon D Goldenberg, Sahil Khanna, Vineet Ahuja, Christian Lodberg Hvas, Govind K Makharia, Horace R T Williams","doi":"10.1016/j.ijid.2026.108574","DOIUrl":"https://doi.org/10.1016/j.ijid.2026.108574","url":null,"abstract":"<p><strong>Background: </strong>Faecal microbiota transplant (FMT) is an effective therapy for recurrent Clostridioides difficile infection (CDI); its use is increasingly being investigated for other indications. Although regional surveys and national registries have provided insight into local practices, a comprehensive global overview of FMT access, implementation and governance is lacking.</p><p><strong>Methods: </strong>A survey regarding key aspects related to FMT use was disseminated electronically to members of the World Gastroenterology Organisation, European FMT Network, and International Society of Infectious Diseases. Responses were analysed both descriptively and using appropriate statistical methods.</p><p><strong>Findings: </strong>80 responses were obtained from 55 countries. FMT was available in significantly more Tier 1/2, than Tier 3/4, nations (24/28 vs 8/27; p<0.001). In countries lacking access to FMT reasons included: lack of expertise/infrastructure; financial constraints; regulatory uncertainty; and perceived lack of clinical need. Most countries using FMT employed both upper and lower gastrointestinal administration routes; 18/32 (56%) used capsulised FMT. Almost all countries with access to FMT used it to treat CDI, albeit with different thresholds for the number of CDI episodes prior to use. There were many non-CDI indications for FMT in current use. Payment for stool donation was reported by 10 countries.</p><p><strong>Interpretation: </strong>This is the first global overview of FMT availability and governance, highlighting substantial international inequities and considerable heterogeneity in regulation, clinical use, donor screening, and cost. Standardisation of practice and targeted support for lower income countries is needed to ensure equitable access and to promote safe, high-quality delivery as FMT and microbiome-based therapeutics continue to evolve.</p>","PeriodicalId":14006,"journal":{"name":"International Journal of Infectious Diseases","volume":" ","pages":"108574"},"PeriodicalIF":4.3,"publicationDate":"2026-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147493918","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}