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NemaCount: quantification of nematode chemotaxis behavior in a browser. NemaCount:在浏览器中量化线虫趋化行为。
Q4 Neuroscience Pub Date : 2016-06-01 Epub Date: 2016-05-21 DOI: 10.1007/s10158-016-0188-1
Damien M O'Halloran

Nematodes such as Caenorhabditis elegans offer a very effective and tractable system to probe the underlying mechanisms of diverse sensory behaviors. Numerous platforms exist for quantifying nematode behavior and often require separate dependencies or software. Here I describe a novel and simple tool called NemaCount that provides a versatile solution for the quantification of nematode chemotaxis behavior. The ease of installation and user-friendly interface makes NemaCount a practical tool for measuring diverse behaviors and image features of nematodes such as C. elegans. The main advantage of NemaCount is that it operates from within a modern browser such as Google Chrome or Apple Safari. Any features that change in total number, size, shape, or angular distance between control and experimental preparations are suited to NemaCount for image analysis, while commonly used chemotaxis assays can be quantified, and statistically analyzed using a suite of functions from within NemaCount. NemaCount also offers image filtering options that allow the user to improve object detection and measurements. NemaCount was validated by examining nematode chemotaxis behavior; angular distances of locomotory tracks in C. elegans; and body lengths of Heterorhabditis bacteriophora nematodes. Apart from a modern browser, no additional software is required to operate NemaCount, making NemaCount a cheap, simple option for the analysis of nematode images and chemotaxis behavior.

像秀丽隐杆线虫这样的线虫提供了一个非常有效和易于处理的系统来探索各种感觉行为的潜在机制。存在许多量化线虫行为的平台,通常需要单独的依赖项或软件。在这里,我描述了一个新颖而简单的工具,称为NemaCount,它为线虫趋化性行为的量化提供了一个通用的解决方案。易于安装和用户友好的界面使NemaCount成为测量线虫(如秀丽隐杆线虫)的各种行为和图像特征的实用工具。NemaCount的主要优势在于,它可以在谷歌Chrome或苹果Safari等现代浏览器中运行。任何在总数、大小、形状或对照和实验制剂之间的角距离变化的特征都适合NemaCount进行图像分析,而常用的趋化性分析可以量化,并使用NemaCount中的一套功能进行统计分析。NemaCount还提供图像过滤选项,允许用户改进对象检测和测量。NemaCount通过检测线虫趋化行为得到验证;秀丽隐杆线虫运动轨迹的角距离;嗜杆菌异habditis bacteriophora线虫体长。除了一个现代的浏览器,不需要额外的软件来操作NemaCount,使NemaCount成为一个便宜,简单的选择,用于分析线虫图像和趋化行为。
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引用次数: 2
Report on the 13th symposium on invertebrate neurobiology held 26-30 August 2015 at the Balaton Limnological Institute, MTA Centre for ecological research of the Hungarian Academy of Sciences, Tihany, Hungary. 2015年8月26日至30日在匈牙利科学院生态研究中心巴拉顿湖沼研究所举行的第13届无脊椎神经生物学研讨会报告。
Q4 Neuroscience Pub Date : 2016-06-01 DOI: 10.1007/s10158-016-0186-3
Anna Crisford, Lindy Holden-Dye, Robert J Walker

This report summarizes the lectures and posters presented at the International Society for Invertebrate Neurobiology's 13th symposium held 26-30 August 2015, at the Balaton Limnological Institute, MTA Centre for Ecological Research, Tihany, Hungary. The symposium provided an opportunity for scientists working on a range of topics in invertebrate neurobiology to meet and present their research and discuss ways to advance the discipline.

本报告总结了2015年8月26日至30日在匈牙利蒂哈尼MTA生态研究中心巴拉顿湖沼研究所举行的国际无脊椎神经生物学学会第13届研讨会上的演讲和海报。这次研讨会为从事无脊椎神经生物学研究的科学家们提供了一个机会,他们可以见面并展示他们的研究成果,并讨论如何推进这一学科。
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引用次数: 0
Context-dependent regulation of feeding behaviour by the insulin receptor, DAF-2, in Caenorhabditis elegans. 草履虫胰岛素受体 DAF-2 对摄食行为的情境依赖性调控
Q4 Neuroscience Pub Date : 2016-06-01 Epub Date: 2016-05-21 DOI: 10.1007/s10158-016-0187-2
James Dillon, Lindy Holden-Dye, Vincent O'Connor, Neil A Hopper

Insulin signalling plays a significant role in both developmental programmes and pathways modulating the neuronal signalling that controls adult behaviour. Here, we have investigated insulin signalling in food-associated behaviour in adult C. elegans by scoring locomotion and feeding on and off bacteria, the worm's food. This analysis used mutants (daf-2, daf-18) of the insulin signalling pathway, and we provide evidence for an acute role for insulin signalling in the adult nervous system distinct from its impact on developmental programmes. Insulin receptor daf-2 mutants move slower than wild type both on and off food and showed impaired locomotory responses to food deprivation. This latter behaviour is manifest as a failure to instigate dispersal following prolonged food deprivation and suggests a role for insulin signalling in this adaptive response. Insulin receptor daf-2 mutants are also deficient in pharyngeal pumping on food and off food. Pharmacological analysis showed the pharynx of daf-2 is selectively compromised in its response to 5-HT compared to the excitatory neuropeptide FLP-17. By comparing the adaptive pharyngeal behaviour in intact worms and isolated pharyngeal preparations, we determined that an insulin-dependent signal extrinsic to the pharyngeal system is involved in feeding adaptation. Hence, we suggest that reactive insulin signalling modulates both locomotory foraging and pharyngeal pumping as the animal adapts to the absence of food. We discuss this in the context of insulin signalling directing a shift in the sensitivity of neurotransmitter systems to regulate the worm's response to changes in food availability in the environment.

胰岛素信号在发育程序和控制成虫行为的神经元信号调节途径中都发挥着重要作用。在这里,我们通过对蠕虫的运动和在细菌(蠕虫的食物)上的进食和离体进食进行评分,研究了胰岛素信号在成虫与食物相关行为中的作用。这项分析使用了胰岛素信号通路的突变体(daf-2、daf-18),我们为胰岛素信号在成虫神经系统中的急性作用提供了证据,这种作用不同于其对发育程序的影响。胰岛素受体daf-2突变体在进食和不进食时都比野生型行动迟缓,并对食物剥夺表现出运动反应受损。后一种行为表现为长期缺乏食物后无法驱散,这表明胰岛素信号在这种适应性反应中的作用。胰岛素受体daf-2突变体在进食和不进食时也缺乏咽泵功能。药理分析表明,与兴奋性神经肽FLP-17相比,daf-2的咽部对5-羟色胺的反应受到了选择性损害。通过比较完整蠕虫和离体咽部制备物的咽部适应行为,我们确定咽部系统外的胰岛素依赖信号参与了摄食适应。因此,我们认为反应性胰岛素信号在动物适应缺乏食物时会调节运动性觅食和咽部泵动。我们将从胰岛素信号引导神经递质系统敏感性的转变来调节蠕虫对环境中食物供应变化的反应这一角度来讨论这一问题。
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引用次数: 0
Cloning and molecular characterization of a putative voltage-gated sodium channel gene in the crayfish 小龙虾电压门控钠通道基因的克隆与分子特性研究
Q4 Neuroscience Pub Date : 2016-03-31 DOI: 10.1007/s10158-016-0185-4
C. Coskun, N. Puralı
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引用次数: 4
The impact of Directive 2010/63/EU on cephalopod research 指令2010/63/EU对头足类动物研究的影响
Q4 Neuroscience Pub Date : 2015-12-08 DOI: 10.1007/s10158-015-0183-y
G. Cristina, P. Andrews, G. Ponte, V. Galligioni, G. Fiorito
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引用次数: 16
Single-cell analysis of peptide expression and electrophysiology of right parietal neurons involved in male copulation behavior of a simultaneous hermaphrodite 雌雄同体雄性交配行为中右顶叶神经元肽表达和电生理的单细胞分析
Q4 Neuroscience Pub Date : 2015-12-06 DOI: 10.1007/s10158-015-0184-x
Z. Filali, P. D. de Boer, bullet A W Pieneman, bullet R P J De Lange, bullet R F Jansen, bullet A Ter Maat, bullet R C Van Der Schors, bullet K W Li, bullet N M Van Straalen, J. Koene
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引用次数: 4
Invertebrate neuroscience and CephsInAction at the Mediterranean Society for Neuroscience Meeting Cagliari 2015. 2015年地中海神经科学学会会议上的无脊椎神经科学和CephsInAction。
Q4 Neuroscience Pub Date : 2015-12-01 DOI: 10.1007/s10158-015-0182-z
Lindy Holden-Dye, Graziano Fiorito, Giovanna Ponte

Invertebrate neuroscience, and in particular cephalopod research, is well represented in the Mediterranean region. Therefore, the recent meeting of the Mediterranean Society for Neuroscience in Santa Margherita di Pula, Sardinia (12-15 June 2015) provided an excellent opportunity for invertebrate contributions. Furthermore, the Chair of an EU COST Action for cephalopod research (FA1301; www.cephsinaction.org ), Giovanna Ponte, together with Graziano Fiorito from the Stazione Zoologica, Naples, aligned a meeting of research groups working in the field of cephalopod neurophysiology from across Europe to coincide with the neuroscience meeting. This provided an exciting forum for exchange of ideas. Here we provide brief highlights of both events and an explanation of the activities of the COST Action for the broader invertebrate neuroscience community.

无脊椎动物神经科学,特别是头足类动物的研究,在地中海地区有很好的代表性。因此,最近在撒丁岛Santa Margherita di Pula举行的地中海神经科学学会会议(2015年6月12日至15日)为无脊椎动物的贡献提供了绝佳的机会。此外,欧盟头足类动物研究成本行动(FA1301;www.cephsinaction.org), Giovanna Ponte和来自那不勒斯国家动物学研究所的Graziano Fiorito组织了一次来自欧洲的头足类动物神经生理学领域的研究小组会议,以配合神经科学会议。这为思想交流提供了一个令人兴奋的论坛。在这里,我们简要介绍了这两个事件的亮点,并为更广泛的无脊椎神经科学界提供了成本行动活动的解释。
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引用次数: 0
Decrease in levels of the evolutionarily conserved microRNA miR-124 affects oligodendrocyte numbers in Zebrafish, Danio rerio. 进化上保守的microRNA miR-124水平的降低影响斑马鱼少突胶质细胞数量。
Q4 Neuroscience Pub Date : 2015-09-01 Epub Date: 2015-07-10 DOI: 10.1007/s10158-015-0180-1
Jacqueline K Morris, Anthony Chomyk, Ping Song, Nate Parker, Sadie Deckard, Bruce D Trapp, Sanjay W Pimplikar, Ranjan Dutta

Oligodendrocytes produce multi-lamellar myelin membranes that surround axons in the central nervous system (CNS). Preservation and generation of myelin are potential therapeutic targets for dysmyelinating and demyelinating diseases. MicroRNAs (miRNAs) play a vital role in oligodendrocyte differentiation and overall CNS development. miR-124 is a well-conserved neuronal miRNA with important roles in neuronal differentiation and function. miR-124 levels increase following loss of myelin in both human and rodent brains. While the role of neuronal miR-124 in neurogenesis has been established, its effects on axonal outgrowth and oligodendrocytes are not currently known. We therefore explored the possible effect of selective knockdown of miR-124 in Danio rerio using a morpholino-based knockdown approach. No morphological abnormalities or loss of motor neurons were detected despite loss of axonal outgrowth. Morpholino-based knockdown of miR-124 led to reciprocal increases in mRNA levels of target genes that inhibit axonal and dendritic projections. Importantly, loss of miR-124 led to decreased oligodendrocyte cell numbers and myelination of axonal projections in the ventral hindbrain. Taken together, our results add a new dimension to the existing complexity of neuron-glial relationships and highlight the utility of Danio rerio as a model system to investigate such interactions.

在中枢神经系统(CNS)中,少突胶质细胞产生围绕轴突的多层髓鞘膜。髓磷脂的保存和生成是髓鞘异常和脱髓鞘疾病的潜在治疗靶点。MicroRNAs (miRNAs)在少突胶质细胞分化和中枢神经系统的整体发育中起着至关重要的作用。miR-124是一种保守的神经元miRNA,在神经元分化和功能中起重要作用。在人和啮齿动物的大脑中,髓磷脂丢失后miR-124水平升高。虽然神经元miR-124在神经发生中的作用已经确定,但其对轴突生长和少突胶质细胞的影响目前尚不清楚。因此,我们使用基于morpholino的敲除方法探索了在小鼠中选择性敲除miR-124的可能影响。尽管轴突外突缺失,但未发现形态学异常或运动神经元缺失。基于morpholinos的miR-124敲低导致抑制轴突和树突投射的靶基因mRNA水平的相互增加。重要的是,miR-124的缺失导致少突胶质细胞数量减少和后脑腹侧轴突突起的髓鞘形成。综上所述,我们的研究结果为现有的神经元-胶质关系的复杂性增加了一个新的维度,并突出了Danio rerio作为研究这种相互作用的模型系统的实用性。
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引用次数: 13
Transient effects of levamisole on Brugia malayi microfilariae. 左旋咪唑对马来布鲁氏微丝虫的瞬时效应。
Q4 Neuroscience Pub Date : 2015-09-01 Epub Date: 2015-07-18 DOI: 10.1007/s10158-015-0181-0
Eman Mostafa, Bob Storey, Adel Mohammed Farghaly, Hany Abd El-Hai Afify, Afaf Abd El-Raouf Taha, Adrian J Wolstenholme

Levamisole is an anthelmintic drug that acts by activating nicotinic acetylcholine receptors at the nematode neuromuscular junction and causing paralysis. We measured the in vitro effects of levamisole on the motility of Brugia malayi microfilariae; after 2 h incubation the apparent IC50 was 2.68 mM. Lower drug concentrations, such as 1 mM, caused an immediate total paralysis that lasted for up to 1 h, but was completely reversed by 2 h of incubation. The 'recovered' parasites were still completely susceptible to application of a second nicotinic agonist, pyrantel.

左旋咪唑是一种驱虫药,其作用是激活线虫神经肌肉连接处的烟碱乙酰胆碱受体,引起麻痹。本实验测定了左旋咪唑对马来布鲁氏微丝的体外运动能力的影响;孵育2小时后,表观IC50为2.68 mM。较低的药物浓度(如1 mM)可立即引起持续长达1小时的完全麻痹,但在孵育2小时后完全逆转。“恢复”的寄生虫仍然对第二种尼古丁激动剂吡喃醚完全敏感。
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引用次数: 5
Habituation of LG-mediated tailflip in the crayfish. 小龙虾脑电介导的尾巴翻转的习惯化。
Q4 Neuroscience Pub Date : 2015-06-01 Epub Date: 2015-03-22 DOI: 10.1007/s10158-015-0178-8
Toshiki Nagayama, Makoto Araki

Crayfish escape from threatening stimuli by tailflipping. If a stimulus is applied to the rear, crayfish escape up and forwards in a summersault maneuver that is mediated by the activation of lateral giant (LG) interneurons. The occurrence probability of LG-mediated tailflip, however, diminishes and habituates if a stimulus is repeatedly applied. Since crayfish have a relatively simple CNS with many identifiable neurons, crayfish represent a good animal to analyze the cellular basis of habituation. A reduction in the amplitude of the EPSP in the LGs, caused by direct chemical synaptic connection from sensory afferents by repetitive stimulations, is essential to bring about an inactivation of the LGs. The spike response of the LGs recovers within several minutes of habituation, but the LGs subsequently fail to spike when an additional stimulus is applied after specific periods following habituation. These results indicate that a decline in synaptic efficacy from the mechanosensory afferents recovers readily after a short delay, but then the excitability of the LGs themselves decreases. Furthermore, the processes underlying habituation are modulated depending on a social status. When two crayfish encounter each other, a winner-loser relationship is established. With a short interstimulus interval of 5 s, the rate of habituation of the LG in both socially dominant and subordinate crayfish becomes lower than in socially isolated animals. Serotonin and octopamine affect this social status-dependent modulation of habituation by means of activation of downstream second messenger system of cAMP and IP3 cascades, respectively.

小龙虾通过翻转尾巴来躲避危险的刺激。如果刺激施加到后部,小龙虾就会在激活外侧巨(LG)中间神经元的介导下,以夏季翻腾的动作向上和向前逃跑。然而,如果重复施加刺激,则lg介导的翻尾发生概率会减少并习惯性。由于小龙虾具有相对简单的中枢神经系统和许多可识别的神经元,因此小龙虾是分析习惯化细胞基础的良好动物。由重复刺激引起的感觉传入的直接化学突触连接引起的LGs中EPSP振幅的降低是导致LGs失活的必要条件。在适应后的几分钟内,LGs的峰值反应恢复,但在适应后的特定时期施加额外刺激时,LGs随后无法达到峰值。这些结果表明,机械感觉传入的突触效能下降在短暂延迟后很容易恢复,但随后LGs本身的兴奋性下降。此外,习惯化的过程是根据社会地位而调节的。当两只小龙虾相遇时,一种输赢的关系就建立了。在短暂的5 s的刺激间隔中,社会优势和从属小龙虾的LG适应率都低于社会孤立动物。血清素和章鱼胺分别通过激活下游cAMP和IP3级联的第二信使系统来影响这种社会地位依赖性的习惯化调节。
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引用次数: 9
期刊
Invertebrate Neuroscience
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