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N6-methyladenosine demethyltransferase FTO alleviates sepsis by upregulating BNIP3 to induce mitophagy. N6-甲基腺苷脱甲基转移酶FTO通过上调BNIP3诱导有丝分裂来缓解败血症。
IF 4.5 2区 生物学 Q2 CELL BIOLOGY Pub Date : 2024-09-22 DOI: 10.1002/jcp.31448
Pingping Qi, Wei Zhang, Yang Gao, Shengkui Chen, Minghe Jiang, Rong He, Wenzhong Chen, Xiawei Wei, Bingquan Hu, Hao Xu, Minsheng Wu, Rong Tang

N6-methyladenosine (m6A) is known to be crucial in various biological processes, but its role in sepsis-induced circulatory and cardiac dysfunction is not well understood. Specifically, mitophagy, a specialized form of autophagy, is excessively activated during lipopolysaccharide (LPS)-induced myocardial injury. This study aimed to investigate the impact of LPS-induced endotoxemia on m6A-RNA methylation and its role in regulating mitophagy in sepsis-induced myocardial dysfunction. Our research demonstrated that FTO (fat mass and obesity-associated protein), an m6A demethylase, significantly affects abnormal m6A modification in the myocardium and cardiomyocytes following LPS treatment. In mice, cardiac dysfunction and cardiomyocyte apoptosis worsened after adeno-associated virus serotype 9 (AAV9)-mediated FTO knockdown. Further analyses to uncover the cellular mechanisms improving cardiac function showed that FTO reduced mitochondrial reactive oxygen species, restored both basal and maximal respiration, and preserved mitochondrial membrane potential. We revealed that FTO plays a critical role in activating mitophagy by targeting BNIP3. Additionally, the cardioprotective effects of AAV-FTO were significantly compromised by mdivi-1, a mitophagy inhibitor. Mechanistically, FTO interacted with BNIP3 transcripts and regulated their expression in an m6A-dependent manner. Following FTO silencing, BNIP3 transcripts with elevated m6A modification levels in their coding regions were bound by YTHDF2 (YT521-B homology m6A RNA-binding protein 2), leading to mRNA destabilization and decreased BNIP3 protein levels. These findings highlight the importance of FTO-dependent cardiac m6A methylation in regulating mitophagy and enhance our understanding of this critical interplay, which is essential for developing therapeutic strategies to protect cardiac mitochondrial function, alleviate cardiac dysfunction, and improve survival during sepsis.

众所周知,N6-甲基腺苷(m6A)在多种生物过程中起着至关重要的作用,但它在脓毒症诱发的循环和心脏功能障碍中的作用却不甚明了。具体来说,在脂多糖(LPS)诱导的心肌损伤过程中,自噬的一种特殊形式--有丝分裂被过度激活。本研究旨在探讨 LPS 诱导的内毒素血症对 m6A-RNA 甲基化的影响及其在脓毒症诱发的心肌功能障碍中调控有丝分裂的作用。我们的研究表明,m6A 去甲基化酶 FTO(脂肪量和肥胖相关蛋白)会显著影响 LPS 处理后心肌和心肌细胞中的异常 m6A 修饰。在小鼠中,腺相关病毒血清型 9(AAV9)介导的 FTO 敲除后,心功能障碍和心肌细胞凋亡会恶化。为揭示改善心脏功能的细胞机制而进行的进一步分析表明,FTO 可减少线粒体活性氧,恢复基础呼吸和最大呼吸,并保持线粒体膜电位。我们发现,FTO 通过靶向 BNIP3 在激活有丝分裂方面发挥了关键作用。此外,AAV-FTO 的心脏保护作用在有丝分裂抑制剂 mdivi-1 的作用下受到显著影响。从机理上讲,FTO与BNIP3转录物相互作用,并以依赖m6A的方式调节其表达。FTO沉默后,编码区m6A修饰水平升高的BNIP3转录本被YTHDF2(YT521-B同源m6A RNA结合蛋白2)结合,导致mRNA失稳和BNIP3蛋白水平下降。这些发现凸显了 FTO 依赖性心脏 m6A 甲基化在调节有丝分裂中的重要性,并加深了我们对这一关键相互作用的理解,这对开发治疗策略以保护心脏线粒体功能、缓解心脏功能障碍和提高脓毒症期间的存活率至关重要。
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引用次数: 0
KDF1 promotes ameloblast differentiation by inhibiting the IKK/IκB/NF-κB axis. KDF1 通过抑制 IKK/IκB/NF-κB 轴促进成骨细胞分化。
IF 4.5 2区 生物学 Q2 CELL BIOLOGY Pub Date : 2024-09-19 DOI: 10.1002/jcp.31437
Hangbo Liu, Miao Yu, Kai Sun, Jinglei Zheng, Jiayu Wang, Haochen Liu, Hailan Feng, Yang Liu, Dong Han

Enamel protects teeth from external irritation and its formation involves sequential differentiation of ameloblasts, a dental epithelial cell. Keratinocyte differentiation factor 1 (KDF1) is important in the development of epithelial tissues and organs. However, the specific role of KDF1 in enamel formation and corresponding regulatory mechanisms are unclear. This study demonstrated that KDF1 was persistently expressed in all stages of ameloblast differentiation, through RNAscope in situ hybridization. KDF1 expression in the mouse ameloblast cell line LS8 was demonstrated via immunofluorescence assay. KDF1 was knocked out in LS8 cells using the CRISPR/Cas-9 system or overexpressed in LS8 cells through lentiviral infection. In vitro ameloblast differentiation induction, quantitative reverse transcription PCR, western blot analysis, and alkaline phosphatase (ALP) assay indicated that knockout or overexpression of KDF1 in LS8 cells decreased or increased the mRNA and protein levels of several key amelogenesis markers, as well as ALP activity. Furthermore, liquid chromatography-mass spectrometry and co-immunoprecipitation analyses revealed that KDF1 can interact with the IKK complex, thereby inhibiting the NF-κB pathway. Suppressing NF-κB activity partially recovered the decreased ameloblast differentiation in LS8 cells induced by KDF1-knockout. This study demonstrated that KDF1 can promote ameloblast differentiation of LS8 cells by inhibiting the IKK/IκB/NF-κB axis, and is a potential target for functional enamel regeneration.

珐琅质保护牙齿免受外界刺激,它的形成涉及牙釉质上皮细胞(ameloblasts)的连续分化。角质细胞分化因子 1(KDF1)在上皮组织和器官的发育过程中非常重要。然而,KDF1在釉质形成中的具体作用及相应的调控机制尚不清楚。本研究通过 RNAscope 原位杂交证实,KDF1 在釉母细胞分化的各个阶段都有持续表达。通过免疫荧光检测证明了KDF1在小鼠成釉细胞系LS8中的表达。利用 CRISPR/Cas-9 系统在 LS8 细胞中敲除 KDF1,或通过慢病毒感染在 LS8 细胞中过表达 KDF1。体外成髓细胞分化诱导、定量反转录 PCR、Western 印迹分析和碱性磷酸酶(ALP)检测表明,在 LS8 细胞中敲除或过表达 KDF1 会降低或提高几个关键成髓标志物的 mRNA 和蛋白水平以及 ALP 活性。此外,液相色谱-质谱法和共免疫沉淀分析表明,KDF1能与IKK复合物相互作用,从而抑制NF-κB通路。抑制NF-κB活性可部分恢复KDF1基因敲除诱导的LS8细胞成髓细胞分化的下降。这项研究表明,KDF1可通过抑制IKK/IκB/NF-κB轴促进LS8细胞的成釉细胞分化,是功能性釉质再生的潜在靶点。
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引用次数: 0
Vgll2 as an integrative regulator of mitochondrial function and contractility specific to skeletal muscle Vgll2 是骨骼肌线粒体功能和收缩力的综合调节器
IF 5.6 2区 生物学 Q2 CELL BIOLOGY Pub Date : 2024-09-17 DOI: 10.1002/jcp.31436
Masahiko Honda, Ryota Inoue, Kuniyuki Nishiyama, Takeshi Ueda, Akiyoshi Komuro, Hisayuki Amano, Ryoichi Sugisawa, Suman Dash, Jun Shirakawa, Hitoshi Okada
During skeletal muscle adaptation to physiological or pathophysiological signals, contractile apparatus and mitochondrial function are coordinated to alter muscle fiber type. Although recent studies have identified various factors involved in modifying contractile proteins and mitochondrial function, the molecular mechanisms coordinating contractile and metabolic functions during muscle fiber transition are not fully understood. Using a gene‐deficient mouse approach, our previous studies uncovered that vestigial‐like family member 2 (Vgll2), a skeletal muscle‐specific transcription cofactor activated by exercise, is essential for fast‐to‐slow adaptation of skeletal muscle. The current study provides evidence that Vgll2 plays a role in increasing muscle mitochondrial mass and oxidative capacity. Transgenic Vgll2 overexpression in mice altered muscle fiber composition toward the slow type and enhanced exercise endurance, which contradicted the outcomes observed with Vgll2 deficiency. Vgll2 expression was positively correlated with the expression of genes related to mitochondrial function in skeletal muscle, mitochondrial DNA content, and protein abundance of oxidative phosphorylation complexes. Additionally, Vgll2 overexpression significantly increased the maximal respiration of isolated muscle fibers and enhanced the suppressive effects of endurance training on weight gain. Notably, no additional alteration in expression of myosin heavy chain genes was observed after exercise, suggesting that Vgll2 plays a direct role in regulating mitochondrial function, independent of its effect on contractile components. The observed increase in exercise endurance and metabolic efficiency may be attributed to the acute upregulation of genes promoting fatty acid utilization as a direct consequence of Vgll2 activation facilitated by endurance exercise. Thus, the current study establishes that Vgll2 is an integrative regulator of mitochondrial function and contractility in skeletal muscle.
在骨骼肌适应生理或病理生理信号的过程中,收缩装置和线粒体功能会相互协调,从而改变肌肉纤维类型。尽管最近的研究发现了参与改变收缩蛋白和线粒体功能的各种因素,但在肌肉纤维转变过程中协调收缩和代谢功能的分子机制还不完全清楚。利用基因缺陷小鼠方法,我们之前的研究发现,类躯干家族成员 2(Vgll2)是运动激活的骨骼肌特异性转录辅助因子,对骨骼肌的快慢适应至关重要。目前的研究提供了 Vgll2 在增加肌肉线粒体质量和氧化能力方面发挥作用的证据。在小鼠体内过量表达转基因 Vgll2 可改变肌肉纤维组成,使其向慢速型发展,并增强运动耐力,这与 Vgll2 缺乏时观察到的结果相反。Vgll2 的表达与骨骼肌线粒体功能相关基因的表达、线粒体 DNA 含量和氧化磷酸化复合物的蛋白质丰度呈正相关。此外,Vgll2 的过表达能显著提高离体肌纤维的最大呼吸量,并增强耐力训练对体重增加的抑制作用。值得注意的是,运动后没有观察到肌球蛋白重链基因表达的额外改变,这表明 Vgll2 在调节线粒体功能方面发挥着直接作用,而与它对收缩成分的影响无关。所观察到的运动耐力和新陈代谢效率的提高可能是由于促进脂肪酸利用的基因急性上调,这是耐力运动促进 Vgll2 激活的直接结果。因此,本研究证实 Vgll2 是骨骼肌线粒体功能和收缩力的综合调节因子。
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引用次数: 0
Interplay between bone marrow adiposity and bone resorption in RANKL-mediated modelled osteoporosis. 在 RANKL 介导的骨质疏松症模型中,骨髓脂肪和骨吸收之间存在相互作用。
IF 4.5 2区 生物学 Q2 CELL BIOLOGY Pub Date : 2024-09-15 DOI: 10.1002/jcp.31434
Vagelis Rinotas, Evi Gkikopoulou, Efthymiοs Tzortzis, Konstantinos Kritikos, Panagiota Siatra, Apostolos Papadopoulos, Vasiliki-Iris Perivolidi, Eleni Douni

Bone marrow adipose tissue (BMAT) accrues in osteoporosis, whereas its contribution to the progression of bone resorption remains insufficiently understood. To understand the mechanisms that promote BMAT expansion in osteoporosis, in the present study, we performed extensive analysis of the spatiotemporal pattern of BMAT expansion during the progression of bone resorption in TgRANKL transgenic mouse models of osteoporosis expressing human RANKL (receptor activator of nuclear factor-κB ligand). Our results showed that TgRANKL mice of both sexes developed dramatically increased BMAT expansion compared to wild-type (WT) littermates, that was analogous to the levels of RANKL expression and the severity of the bone loss phenotype. BMAT was formed at close proximity to areas undergoing active bone remodelling and bone resorption, whereas bone resorption preceded BMAT development. Expression analysis in bone fractions demonstrated that BMAT constitutes a major source for RANKL production. Ex vivo analysis of isolated bone marrow stromal cells from TgRANKL mice showed an increased adipogenic differentiation capacity compared to WT, while osteoclast supernatants further exaggerated adipogenesis, supporting a critical role of the osteoclast-derived secretome in the differentiation of bone marrow adipocytes. Furthermore, the effectiveness of an antiosteoporosis treatment in BMAT development was investigated upon treatment of TgRANKL models with the bisphosphonate alendronate. Notably, alendronate effectively improved bone mass and attenuated BMAT expansion, indicating a possible involvement of osteoclasts and bone resorption in BMAT development. On the contrary, inhibition of BMAT with PPARγ antagonists (GW9662 or BADGE) effectively ameliorated BMAT expansion but failed to reverse the osteoporotic phenotype of TgRANKL mice. Overall, our data demonstrate that TgRANKL mice constitute unique genetic mouse models for investigating the pathogenic mechanisms that regulate the development and expansion of BMAT in osteolytic diseases.

骨髓脂肪组织(BMAT)在骨质疏松症中不断增加,但其对骨吸收进展的贡献仍未得到充分了解。为了了解骨质疏松症中促进骨髓脂肪组织增生的机制,在本研究中,我们对表达人 RANKL(核因子κB 受体激活剂配体)的 TgRANKL 转基因骨质疏松症小鼠模型在骨吸收进展过程中骨髓脂肪组织增生的时空模式进行了广泛分析。我们的研究结果表明,与野生型(WT)小鼠相比,TgRANKL 小鼠(雌雄均有)的 BMAT 扩增显著增加,这与 RANKL 的表达水平和骨质流失表型的严重程度类似。BMAT的形成靠近骨重塑和骨吸收活跃的区域,而骨吸收先于BMAT的形成。骨碎片中的表达分析表明,BMAT 是 RANKL 生成的主要来源。对 TgRANKL 小鼠分离的骨髓基质细胞进行的体内外分析表明,与 WT 小鼠相比,TgRANKL 小鼠的成脂分化能力增强,而破骨细胞上清液则进一步加剧了成脂过程,这证明破骨细胞衍生的分泌物在骨髓脂肪细胞的分化过程中起着关键作用。此外,在用双膦酸盐阿仑膦酸盐处理 TgRANKL 模型时,还研究了抗骨质疏松症治疗对骨髓脂肪细胞发育的有效性。值得注意的是,阿仑膦酸盐能有效改善骨量并减轻 BMAT 的扩张,这表明破骨细胞和骨吸收可能参与了 BMAT 的形成。相反,用 PPARγ 拮抗剂(GW9662 或 BADGE)抑制 BMAT 能有效改善 BMAT 的扩张,但却不能逆转 TgRANKL 小鼠的骨质疏松表型。总之,我们的数据表明,TgRANKL 小鼠是研究溶骨性疾病中调控 BMAT 发育和扩张的致病机制的独特遗传小鼠模型。
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引用次数: 0
Cytokine and chemokine receptor profiles in adipose tissue vasculature unravel endothelial cell responses in HIV 脂肪组织血管中的细胞因子和趋化因子受体图谱揭示了内皮细胞对艾滋病毒的反应
IF 5.6 2区 生物学 Q2 CELL BIOLOGY Pub Date : 2024-09-12 DOI: 10.1002/jcp.31415
Laventa M. Obare, Stephen Priest, Anas Ismail, Mona Mashayekhi, Xiuqi Zhang, Lindsey K. Stolze, Quanhu Sheng, Kisyua Nthenge, Zer Vue, Kit Neikirk, Heather K. Beasley, Curtis Gabriel, Tecla Temu, Sara Gianella, Simon A. Mallal, John R. Koethe, Antentor Hinton, Samuel S. Bailin, Celestine N. Wanjalla
Chronic systemic inflammation significantly increases myocardial infarction risk in people living with HIV (PLWH). Endothelial cell dysfunction disrupts vascular homeostasis regulation, increasing the risk of vasoconstriction, inflammation, and thrombosis, contributing to cardiovascular disease. We aimed to characterize endothelial cell (EC) chemokines, cytokine, and chemokine receptors of PLWH, hypothesizing that in our cohort, glucose intolerance contributes to their differential expression implicated in endothelial dysfunction. Using single‐cell transcriptomic analysis, we phenotyped chemokine and cytokine receptor expression on arterial ECs, capillary ECs, venous ECs, and vascular smooth muscle cells (VSMCs) in subcutaneous adipose tissue of 59 PLWH with and without glucose intolerance. Our results show that arterial and capillary ECs express significantly higher interferon and tumor necrosis factor (TNF) receptors than venous ECs and VSMCs. Venous ECs exhibited more interleukin (IL)1R1 and ACKR1 receptors, and VSMCs showed significant IL6R expression than arterial and capillary ECs. When stratified by group, arterial ECs from PLWH with glucose intolerance expressed significantly higher IL1R1, IL6R, CXCL12, CCL14, and ICAM2 transcripts than arterial ECs from PLWH without diabetes. Of the different vascular cell types studied, arterial ECs as a proportion of all ECs in adipose tissue were positively correlated with plasma fasting blood glucose. In contrast, venous ECs and VSMCs were positively correlated with plasma IL6. To directly assess the effect of plasma from PLWH on endothelial function, we cultured human arterial ECs (HAECs) in plasma‐conditioned media from PLWH and performed bulk RNA sequencing. Plasma from PLWH stimulated ECs with the upregulation of genes that enrich for the oxidative phosphorylation and the TNF‐α via NFK‐β pathways. In conclusion, ECs in PLWH show heterogeneous cytokine and chemokine receptor expression, and arterial ECs were the most influenced by glucose intolerance. Further research must explicate cytokine and chemokine roles in EC dysfunction and identify biomarkers for disease progression and therapeutic response.
慢性全身性炎症会大大增加艾滋病病毒感染者(PLWH)发生心肌梗死的风险。内皮细胞功能障碍会破坏血管稳态调节,增加血管收缩、炎症和血栓形成的风险,从而导致心血管疾病。我们的目的是描述白血病患者内皮细胞趋化因子、细胞因子和趋化因子受体的特征,假设在我们的队列中,葡萄糖不耐受导致了它们的不同表达,并与内皮功能障碍有牵连。通过单细胞转录组分析,我们对 59 名患有和未患有葡萄糖不耐受症的 PLWH 皮下脂肪组织中的动脉 EC、毛细血管 EC、静脉 EC 和血管平滑肌细胞(VSMC)的趋化因子和细胞因子受体表达进行了表型分析。我们的研究结果表明,动脉和毛细血管选委表达的干扰素和肿瘤坏死因子(TNF)受体明显高于静脉选委和血管平滑肌细胞。与动脉和毛细血管 ECs 相比,静脉 ECs 表现出更多的白细胞介素(IL)1R1 和 ACKR1 受体,VSMCs 表现出明显的 IL6R 表达。如果按组别分层,患有糖耐量异常的 PLWH 患者的动脉心肌表达的 IL1R1、IL6R、CXCL12、CCL14 和 ICAM2 转录物明显高于未患糖尿病的 PLWH 患者的动脉心肌表达的 IL1R1、IL6R、CXCL12、CCL14 和 ICAM2 转录物。在所研究的不同血管细胞类型中,动脉心肌细胞占脂肪组织中所有心肌细胞的比例与血浆空腹血糖呈正相关。相反,静脉 EC 和 VSMC 与血浆 IL6 呈正相关。为了直接评估 PLWH 血浆对内皮功能的影响,我们在 PLWH 血浆调节培养基中培养了人动脉 EC(HAEC),并进行了大量 RNA 测序。来自 PLWH 的血浆刺激了 ECs,上调了富含氧化磷酸化和 TNF-α 通过 NFK-β 通路的基因。总之,白血病患者的心血管细胞表现出不同的细胞因子和趋化因子受体表达,动脉心血管细胞受葡萄糖不耐受的影响最大。进一步的研究必须阐明细胞因子和趋化因子在心血管细胞功能障碍中的作用,并确定疾病进展和治疗反应的生物标志物。
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引用次数: 0
Antioxidant enzyme Prdx1 inhibits osteoclastogenesis via suppressing ROS and NFATc1 signaling pathways 抗氧化酶 Prdx1 通过抑制 ROS 和 NFATc1 信号通路抑制破骨细胞生成
IF 5.6 2区 生物学 Q2 CELL BIOLOGY Pub Date : 2024-09-12 DOI: 10.1002/jcp.31431
Chao Wang, Gang Wang, Fangming Song, Jinmin Zhao, Qian Liu, Jiake Xu
Bone is a dynamic organ which continuously undergoes remodeling throughout one's lifetime. Cellular production of reactive oxygen species (ROS) is essential for regulating bone homeostasis. Osteoclasts, multinucleated giant cells differentiated from macrophage lineage, are responsible for osteolytic bone conditions which are closely linked to ROS signaling pathways. In this study, an anti‐ROS enzyme, peroxiredoxin 1 (Prdx1) was found to be expressed both in bone marrow macrophages and osteoclasts. Recombinant Prdx1 protein was found to dose‐dependently inhibit ROS production and osteoclast differentiation. Mechanistically, Prdx1 protein also attenuated NFATc1 activation as well as the expression of C‐Fos, V‐ATPase‐d2, Cathepsin K, and Integrin αV. Collectively, Prdx1 is a negative regulator on osteoclast formation via inhibiting RANKL‐mediated ROS activity, thus suggesting its potential application for treating osteoclast related disorders.
骨骼是一个动态器官,在人的一生中会不断发生重塑。细胞产生的活性氧(ROS)对调节骨平衡至关重要。破骨细胞是由巨噬细胞分化而来的多核巨细胞,是溶骨性骨病的罪魁祸首,而溶骨性骨病与 ROS 信号通路密切相关。本研究发现,骨髓巨噬细胞和破骨细胞中都表达一种抗 ROS 的酶--过氧化还原酶 1(Prdx1)。研究发现,重组 Prdx1 蛋白可剂量依赖性地抑制 ROS 的产生和破骨细胞的分化。从机制上讲,Prdx1 蛋白还能抑制 NFATc1 的激活以及 C-Fos、V-ATPase-d2、Cathepsin K 和 Integrin αV 的表达。总之,Prdx1 通过抑制 RANKL 介导的 ROS 活性对破骨细胞的形成具有负向调节作用,因此它有可能应用于治疗破骨细胞相关疾病。
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引用次数: 0
Cover Image, Volume 239, Number 9, September 2024 封面图片,第 239 卷第 9 号,2024 年 9 月
IF 4.5 2区 生物学 Q2 CELL BIOLOGY Pub Date : 2024-09-11 DOI: 10.1002/jcp.31438
Amber Crabtree, Kit Neikirk, Julia A. Pinette, Aaron Whiteside, Bryanna Shao, Jessica Bedenbaugh, Zer Vue, Larry Vang, Han Le, Mert Demirci, Taseer Ahmad, Trinity Celeste Owens, Ashton Oliver, Faben Zeleke, Heather K. Beasley, Edgar Garza Lopez, Estevão Scudese, Taylor Rodman, Kinuthia Kabugi, Alice Koh, Suzanne Navarro, Jacob Lam, Ben Kirk, Margaret Mungai, Mariya Sweetwyne, Ho-Jin Koh, Elma Zaganjor, Steven M. Damo, Jennifer A. Gaddy, Annet Kirabo, Sandra A. Murray, Anthonya Cooper, Clintoria Williams, Melanie R. McReynolds, Andrea G. Marshall, Antentor Hinton Jr.

Front Cover Caption: The cover image is based on the article Quantitative assessment of morphological changes in lipid droplets and lipid-mito interactions with aging in brown adipose by Amber Crabtree et al., https://doi.org/10.1002/jcp.31340.

封面标题:封面图片根据 Amber Crabtree 等人的文章《棕色脂肪中脂滴形态变化和脂质-线粒体相互作用随衰老的定量评估》制作,https://doi.org/10.1002/jcp.31340。
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引用次数: 0
Identification and functional characterization of the nuclear and nucleolar localization signals in the intrinsically disordered region of nucleomethylin. 核苷酸甲基林内在无序区核和核极定位信号的鉴定和功能表征。
IF 4.5 2区 生物学 Q2 CELL BIOLOGY Pub Date : 2024-09-08 DOI: 10.1002/jcp.31433
Akshaykumar Nanaji Shrikondawar, Kiranmai Chennoju, Debasish Kumar Ghosh, Akash Ranjan

The nucleolar localization of proteins is regulated by specific signals directing their trafficking to nucleus and nucleolus. Here, we elucidate the mechanism underlying the nuclear and nucleolar localization of the nucleomethylin (NML) protein, focusing on its nuclear localization signals (NLSs) and nucleolar localization signal (NoLS). Using a combination of bioinformatic analysis and experimental validation, we identified two monopartite and one bipartite NLS motifs within NML. The combined presence of both monopartite NLSs significantly enhances nuclear localization of the protein, while specific basic amino acid clusters within the bipartite NLS are crucial for their functionality. We also reveal the functional role of the NLS-coupled NoLS motif in driving nucleolar localization of NML, which contains an arginine-rich motif essential for its function. The basic residues of the arginine-rich motif of NoLS of NML interacts with nucleophosmin 1 (NPM1), allowing the possible liquid-liquid phase separation and retention of NML in the nucleolus. Remarkably, the strong NoLS of NML can direct the nucleolar localization of a cytosolic protein, aldolase, emphasizing its potency. Overall, our findings provide insights into the combinatorial functioning of NLSs and NoLS in regulating the subcellular localization of NML, highlighting the intricate regulatory mechanisms governing its localization within the nucleus and nucleolus.

蛋白质的核极定位受特定信号的调控,这些信号引导蛋白质向细胞核和核仁的迁移。在这里,我们以核定位信号(NLS)和核极定位信号(NoLS)为重点,阐明了核膜蛋白(NML)核定位和核极定位的机制。通过生物信息分析和实验验证相结合的方法,我们确定了 NML 中的两个单方和一个双方 NLS 主题。两个单方 NLS 的共同存在显著增强了蛋白质的核定位,而双方 NLS 中的特定碱性氨基酸簇对其功能至关重要。我们还揭示了NLS偶联NoLS基团在驱动NML核定位中的功能作用,该基团包含一个对其功能至关重要的富精氨酸基团。NML的富含精氨酸的NoLS基序的基本残基与nucleophosmin 1(NPM1)相互作用,使NML可能发生液-液相分离并保留在核仁中。值得注意的是,NML 的强 NoLS 能引导细胞膜蛋白醛缩酶的核仁定位,从而强调了它的效力。总之,我们的研究结果深入揭示了 NLS 和 NoLS 在调控 NML 亚细胞定位过程中的组合功能,凸显了 NML 在细胞核和核仁内定位的复杂调控机制。
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引用次数: 0
Cancer knocks you out by fasting: Cachexia as a consequence of metabolic alterations in cancer. 癌症通过禁食将你击倒:癌症新陈代谢改变导致的恶病质。
IF 4.5 2区 生物学 Q2 CELL BIOLOGY Pub Date : 2024-09-08 DOI: 10.1002/jcp.31417
Salvatore Cortellino, Margherita D'Angelo, Massimiliano Quintiliani, Antonio Giordano

Neoplastic transformation reprograms tumor and surrounding host cell metabolism, increasing nutrient consumption and depletion in the tumor microenvironment. Tumors uptake nutrients from neighboring normal tissues or the bloodstream to meet energy and anabolic demands. Tumor-induced chronic inflammation, a high-energy process, also consumes nutrients to sustain its dysfunctional activities. These tumor-related metabolic and physiological changes, including chronic inflammation, negatively impact systemic metabolism and physiology. Furthermore, the adverse effects of antitumor therapy and tumor obstruction impair the endocrine, neural, and gastrointestinal systems, thereby confounding the systemic status of patients. These alterations result in decreased appetite, impaired nutrient absorption, inflammation, and shift from anabolic to catabolic metabolism. Consequently, cancer patients often suffer from malnutrition, which worsens prognosis and increases susceptibility to secondary adverse events. This review explores how neoplastic transformation affects tumor and microenvironment metabolism and inflammation, leading to poor prognosis, and discusses potential strategies and clinical interventions to improve patient outcomes.

肿瘤转化会重塑肿瘤和周围宿主细胞的新陈代谢,增加肿瘤微环境中的营养消耗和耗竭。肿瘤从邻近的正常组织或血液中吸收营养物质,以满足能量和合成代谢的需求。肿瘤诱发的慢性炎症是一个高能量过程,也会消耗营养物质以维持其功能紊乱的活动。这些与肿瘤相关的代谢和生理变化,包括慢性炎症,对全身代谢和生理产生了负面影响。此外,抗肿瘤治疗的不良反应和肿瘤阻塞损害了内分泌、神经和胃肠系统,从而混淆了患者的全身状况。这些改变导致食欲下降、营养吸收障碍、炎症以及从合成代谢到分解代谢的转变。因此,癌症患者常常营养不良,从而使预后恶化,并增加了继发性不良事件的易感性。本综述探讨了肿瘤转化如何影响肿瘤和微环境代谢及炎症,从而导致不良预后,并讨论了改善患者预后的潜在策略和临床干预措施。
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引用次数: 0
RETRACTION: Impact of Histone Deacetylase Inhibitors SAHA and MS-275 on DNA Repair Pathways in Human Mesenchymal Stem Cells. 回归:组蛋白去乙酰化酶抑制剂 SAHA 和 MS-275 对人类间充质干细胞 DNA 修复途径的影响。
IF 4.5 2区 生物学 Q2 CELL BIOLOGY Pub Date : 2024-09-06 DOI: 10.1002/jcp.31410

Retraction: G. Di Bernardo, N. Alessio, C. Dell'Aversana, F. Casale, D. Teti, M. Cipollaro, L. Altucci, and U. Galderisi, "Impact of Histone Deacetylase Inhibitors SAHA and MS-275 on DNA Repair Pathways in Human Mesenchymal Stem Cells," Journal of Cellular Physiology 225, no. 2 (2010): 537-544, https://doi.org/10.1002/jcp.22236. The above article, published online on 17 March 2024 in Wiley Online Library (wileyonlinelibrary.com), has been retracted by agreement between the journal Editor-in-Chief, Robert Heath; and Wiley Periodicals LLC. The retraction has been agreed upon following an investigation into concerns raised by a third party, which revealed unambiguous image manipulation in Figure 3, SAHA - H2O2 Treatment and SAHA - Untreated panels. The authors admitted to these image alterations, cooperated with the investigation, and were able to provide partial raw data of the article including some of the original, unmodified images. Nonetheless, the modification of the images to change the appearance is clearly against the ethical policy of the journal and Wiley's Best Practice Guidelines on Research Integrity and Publishing Ethics. In addition, based on the received partial raw data, regarding the positive cell counts for the 8oxodG assay, the journal team could not exclude that the visual modification of these images affects the number of counted 8oxodG-positive cells, and consequently the related conclusions of the article. Therefore, the editors have lost confidence in the data presented and have decided to retract the article. The authors were informed of the decision to retract but did not agree to the retraction.

撤回:G. Di Bernardo, N. Alessio, C. Dell'Aversana, F. Casale, D. Teti, M. Cipollaro, L. Altucci, and U. Galderisi, "Impact of Histone Deacetylase Inhibitors SAHA and MS-275 on DNA Repair Pathways in Human Mesenchymal Stem Cells," Journal of Cellular Physiology 225, no:537-544, https://doi.org/10.1002/jcp.22236.上述文章于 2024 年 3 月 17 日在线发表于 Wiley Online Library (wileyonlinelibrary.com),经期刊主编罗伯特-希思(Robert Heath)和 Wiley Periodicals LLC 协议,已被撤回。在对第三方提出的疑虑进行调查后,作者同意撤稿。调查显示,图 3(SAHA - H2O2 处理和 SAHA - 未处理面板)中的图像存在明显的篡改。作者承认对图像进行了修改,并配合了调查,还提供了文章的部分原始数据,包括一些未经修改的原始图像。尽管如此,修改图片以改变外观的行为显然违反了期刊的伦理政策和 Wiley 的《研究诚信与出版伦理最佳实践指南》(Best Practice Guidelines on Research Integrity and Publishing Ethics)。此外,根据收到的有关 8oxodG 检测阳性细胞计数的部分原始数据,期刊团队不能排除对这些图像进行视觉修改会影响 8oxodG 阳性细胞的计数数量,进而影响文章的相关结论。因此,编辑们对所提供的数据失去了信心,决定撤回这篇文章。作者已获悉撤稿决定,但不同意撤稿。
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Journal of Cellular Physiology
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