首页 > 最新文献

Journal of Data Mining in Genomics & Proteomics最新文献

英文 中文
Translocation (2; 5) (q37.3, q14q35.3) in a Case of Male Infertility in Cotonou 易位(2;5)科托努男性不育症1例(q37.3, q14q35.3)
Pub Date : 2021-01-01 DOI: 10.35248/2153-0602.21.12.241
Azonbakin Simon, A. Bruno, Adovoekpe Diane, M. Gbedo, Goussanou Yannick, A. Agbanlinsou, A. Philippe, Gangbo Flore, Lalèyè Anatole
Couple infertility is one of the major public health problems nowadays. Genetic etiologies are rarely discussed in our country, because of the predominance of infectious causes. Here we report a case of translocation t (2; 5) (q37.3;14 q35.3) explaining infertility in a 50-year-old man with a spermogram showing astheno teratozoospermia and normal phenotypic examination.
夫妻不孕症是当今主要的公共卫生问题之一。遗传病因在我国很少讨论,因为感染性病因占主导地位。这里我们报告一个易位t (2;5) (q37.3;14 q35.3)解释了一例50岁男性的不孕症,精子图显示弱畸形精子症,表型检查正常。
{"title":"Translocation (2; 5) (q37.3, q14q35.3) in a Case of Male Infertility in Cotonou","authors":"Azonbakin Simon, A. Bruno, Adovoekpe Diane, M. Gbedo, Goussanou Yannick, A. Agbanlinsou, A. Philippe, Gangbo Flore, Lalèyè Anatole","doi":"10.35248/2153-0602.21.12.241","DOIUrl":"https://doi.org/10.35248/2153-0602.21.12.241","url":null,"abstract":"Couple infertility is one of the major public health problems nowadays. Genetic etiologies are rarely discussed in our country, because of the predominance of infectious causes. Here we report a case of translocation t (2; 5) (q37.3;14 q35.3) explaining infertility in a 50-year-old man with a spermogram showing astheno teratozoospermia and normal phenotypic examination.","PeriodicalId":15630,"journal":{"name":"Journal of Data Mining in Genomics & Proteomics","volume":"130 1","pages":"1-2"},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"73878132","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Overview of DNA Sequencing methods DNA测序方法概述
Pub Date : 2021-01-01 DOI: 10.35248/2153-0602.21.12.E132
S. Martin
DNA sequencing is the way toward deciding the grouping of nucleotides inside a DNA particle. Each organic entity's DNA comprises of a remarkable grouping of nucleotides. Deciding the grouping can help researchers analyze DNA between organic entities, which can help show how the creatures are connected. This implies that by sequencing a stretch of DNA, it will be feasible to know the request in which the four nucleotide bases – adenine, guanine, cytosine, and thymine – happen inside that nucleic corrosive particle. The need of DNA sequencing was first made clear by Francis Crick's hypothesis that the succession of nucleotides inside a DNA atom straightforwardly affected the amino corrosive groupings of proteins. At that point, the conviction was that a totally sequenced genome would prompt a quantum jump in understanding the natural chemistry of cells and organic entities. Present day DNA sequencing comprises of high-throughput strategies which permit whole DNA arrangements to be found very quickly. This innovation has permitted numerous organizations to begin offering at-home DNA testing. Large numbers of the "results" found by these tests are just connections found between a hereditary variation and a specific condition. Notwithstanding, innovation has additionally permitted researchers to test the DNA of numerous organic entities to more readily comprehend developmental connections..
DNA测序是决定DNA颗粒内核苷酸分组的方法。每个有机实体的DNA都由一组显著的核苷酸组成。确定分组可以帮助研究人员分析有机实体之间的DNA,这可以帮助展示生物是如何联系在一起的。这意味着,通过对一段DNA进行测序,就可以知道四种核苷酸碱基——腺嘌呤、鸟嘌呤、胞嘧啶和胸腺嘧啶——是如何在核酸腐蚀颗粒中发生的。弗朗西斯·克里克(Francis Crick)的假设首先明确了DNA测序的必要性,即DNA原子内核苷酸的序列直接影响蛋白质的氨基腐蚀组。当时的信念是,完全测序的基因组将在理解细胞和有机实体的自然化学方面带来巨大飞跃。目前的DNA测序包括高通量策略,允许整个DNA排列被发现非常快。这一创新使得许多组织开始提供家庭DNA检测。这些测试发现的大量“结果”只是在遗传变异和特定疾病之间发现的联系。尽管如此,创新也使研究人员能够测试许多有机实体的DNA,以更容易地理解发育联系。
{"title":"Overview of DNA Sequencing methods","authors":"S. Martin","doi":"10.35248/2153-0602.21.12.E132","DOIUrl":"https://doi.org/10.35248/2153-0602.21.12.E132","url":null,"abstract":"DNA sequencing is the way toward deciding the grouping of nucleotides inside a DNA particle. Each organic entity's DNA comprises of a remarkable grouping of nucleotides. Deciding the grouping can help researchers analyze DNA between organic entities, which can help show how the creatures are connected. This implies that by sequencing a stretch of DNA, it will be feasible to know the request in which the four nucleotide bases – adenine, guanine, cytosine, and thymine – happen inside that nucleic corrosive particle. The need of DNA sequencing was first made clear by Francis Crick's hypothesis that the succession of nucleotides inside a DNA atom straightforwardly affected the amino corrosive groupings of proteins. At that point, the conviction was that a totally sequenced genome would prompt a quantum jump in understanding the natural chemistry of cells and organic entities. Present day DNA sequencing comprises of high-throughput strategies which permit whole DNA arrangements to be found very quickly. This innovation has permitted numerous organizations to begin offering at-home DNA testing. Large numbers of the \"results\" found by these tests are just connections found between a hereditary variation and a specific condition. Notwithstanding, innovation has additionally permitted researchers to test the DNA of numerous organic entities to more readily comprehend developmental connections..","PeriodicalId":15630,"journal":{"name":"Journal of Data Mining in Genomics & Proteomics","volume":"21 1","pages":"1-1"},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"86284458","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Application of Machine Learning Techniques in Predicting of Breast Cancer Metastases Using Decision Tree Algorithm, in Sokoto Northwestern Nigeria 机器学习技术在使用决策树算法预测乳腺癌转移中的应用,尼日利亚西北部Sokoto
Pub Date : 2020-01-01 DOI: 10.35248/2153-0602.20.11.220
A. Musa, U. Aliyu
According to international agency for research on cancer, female breast cancer was the leading type of cancer worldwide in terms of the number of new cases (approximately 2.1 million) diagnosed in 2018. Predicting outcome of a disease is a challenging task. Data mining techniques tends to simplify the prediction segment. Automated tools have made it possible to collect large volumes of medical data, which are made available to the medical research groups. This study aimed to apply machine learning algorithms using decision three classifier and descriptive statistics to evaluate the performance of the model in predicting the probability of cancer metastasis in patients that present late. Materials and method: The breast cancer disease dataset has been taken from the department of Radiotherapy and Oncology of Usmanu Danfodiyo University Teaching Hospital, Sokoto state, Nigerian. Dataset has 259 instances and 10 attributes. The experimental results of this study used, decision three classifier in IMB SPSS (version 23) software environment. In the experiment, two classes were used and therefore a 2 × 2 confusion matrix was applied. Class 0=Not Metastasized, Class 1=Metastasized. We applied supervised machine learning approach in which dataset were divided into two classes that is training and testing using 10 fold cross validation. Results: Shows that 259 instance of breast cancer, 218(84.2%) cases were not metastasized while 41(15.8%) cases were metastasized to the other region of the body. The overall accuracy of the model was found to be 87%, with the sensitivity of 88%, specificity 75% and the precision of 98% Conclusion: Based on these findings, the machine learning algorism using decision three classifiers predicted that 87% of the tumor presented at stage IV, indicating that the tumour can spread to the other region of the body.
根据国际癌症研究机构的数据,就2018年确诊的新病例数量(约210万)而言,女性乳腺癌是全球领先的癌症类型。预测疾病的结果是一项具有挑战性的任务。数据挖掘技术倾向于简化预测部分。自动化工具使收集大量医学数据成为可能,这些数据可供医学研究小组使用。本研究旨在应用机器学习算法,使用决策三分类器和描述性统计来评估模型在预测晚期患者癌症转移概率方面的性能。材料和方法:乳腺癌疾病数据集取自尼日利亚索科托州Usmanu Danfodiyo大学教学医院放射治疗和肿瘤科。数据集有259个实例和10个属性。本研究使用的实验结果,在IMB SPSS (version 23)软件环境下决定三个分类器。在实验中,使用了两个类,因此使用了一个2 × 2的混淆矩阵。0级=未转移,1级=转移。我们应用了有监督的机器学习方法,其中数据集分为两类,使用10倍交叉验证进行训练和测试。结果:259例乳腺癌中,218例(84.2%)未发生转移,41例(15.8%)发生转移。发现该模型的总体准确率为87%,灵敏度为88%,特异性为75%,精度为98%。结论:基于这些发现,使用决策三分类器的机器学习算法预测87%的肿瘤出现在IV期,表明肿瘤可以扩散到身体的其他部位。
{"title":"Application of Machine Learning Techniques in Predicting of Breast Cancer Metastases Using Decision Tree Algorithm, in Sokoto Northwestern Nigeria","authors":"A. Musa, U. Aliyu","doi":"10.35248/2153-0602.20.11.220","DOIUrl":"https://doi.org/10.35248/2153-0602.20.11.220","url":null,"abstract":"According to international agency for research on cancer, female breast cancer was the leading type of cancer worldwide in terms of the number of new cases (approximately 2.1 million) diagnosed in 2018. Predicting outcome of a disease is a challenging task. Data mining techniques tends to simplify the prediction segment. Automated tools have made it possible to collect large volumes of medical data, which are made available to the medical research groups. This study aimed to apply machine learning algorithms using decision three classifier and descriptive statistics to evaluate the performance of the model in predicting the probability of cancer metastasis in patients that present late. Materials and method: The breast cancer disease dataset has been taken from the department of Radiotherapy and Oncology of Usmanu Danfodiyo University Teaching Hospital, Sokoto state, Nigerian. Dataset has 259 instances and 10 attributes. The experimental results of this study used, decision three classifier in IMB SPSS (version 23) software environment. In the experiment, two classes were used and therefore a 2 × 2 confusion matrix was applied. Class 0=Not Metastasized, Class 1=Metastasized. We applied supervised machine learning approach in which dataset were divided into two classes that is training and testing using 10 fold cross validation. Results: Shows that 259 instance of breast cancer, 218(84.2%) cases were not metastasized while 41(15.8%) cases were metastasized to the other region of the body. The overall accuracy of the model was found to be 87%, with the sensitivity of 88%, specificity 75% and the precision of 98% Conclusion: Based on these findings, the machine learning algorism using decision three classifiers predicted that 87% of the tumor presented at stage IV, indicating that the tumour can spread to the other region of the body.","PeriodicalId":15630,"journal":{"name":"Journal of Data Mining in Genomics & Proteomics","volume":"28 1","pages":"1-5"},"PeriodicalIF":0.0,"publicationDate":"2020-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79481763","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Comparative Studies of Vertebrate Mitochondrial Carbonic Anhydrase (CA5) Genes and Proteins: Evidence for Gene Duplication in Mammals with CA5A Being Liver Specific and CA5B Broadly Expressed and Located on the X-Chromosome 脊椎动物线粒体碳酸酐酶(CA5)基因和蛋白质的比较研究:CA5A是肝脏特异性的,CA5B广泛表达并位于x染色体上的哺乳动物基因重复的证据
Pub Date : 2020-01-01 DOI: 10.35248/2165-7556.20.11.223
R. Holmes
At least fifteen families of mammalian carbonic anhydrases (CA) (E.C. 4.2.1.2) catalyse the hydration of carbon dioxide and related functions. CA5A and CA5B genes encode distinct mitochondrial enzymes and perform essential biochemical roles, including ammonia detoxification and glucose metabolism. Bioinformatic methods were used to predict the amino acid sequences, secondary structures and gene locations for CA5A and CA5B genes and proteins using data from vertebrate genome projects. CA5A and CA5B genes usually contained 7 coding exons for each of the vertebrate genomes examined. Human CA5A and CA5B subunits contained 305 and 317 amino acids, respectively, with key amino acid residues including mitochondrial transit peptides; three Zinc binding sites (His130, His132, His155); and a Tyr164 active site. Phylogenetic analyses of vertebrate CA5 gene families suggested that it is an ancient gene in vertebrate evolution which had undergone a gene duplication event in a mammalian ancestral genome forming the CA5A and CA5B gene families in monotreme, marsupial and eutherian mammals. CA5A was predominantly expressed in liver whereas CA5B had a wide tissue distribution profile, was localized on the X-chromosome and was more highly conserved during mammalian evolution.
至少有15个哺乳动物碳酸酐酶(CA)家族(E.C. 4.2.1.2)催化二氧化碳的水合作用和相关功能。CA5A和CA5B基因编码不同的线粒体酶,并发挥重要的生化作用,包括氨解毒和葡萄糖代谢。利用脊椎动物基因组计划数据,采用生物信息学方法预测CA5A和CA5B基因和蛋白质的氨基酸序列、二级结构和基因位置。CA5A和CA5B基因通常包含7个编码外显子。人CA5A和CA5B亚基分别含有305和317个氨基酸,关键氨基酸残基包括线粒体转运肽;三个锌结合位点(His130、His132、His155);和Tyr164活性位点。脊椎动物CA5基因家族的系统发育分析表明,它是脊椎动物进化中的一个古老基因,在哺乳动物祖先基因组中经历了基因复制事件,形成了单孔动物、有袋动物和真动物的CA5A和CA5B基因家族。CA5A主要在肝脏中表达,而CA5B具有广泛的组织分布,定位于x染色体上,在哺乳动物进化过程中更为保守。
{"title":"Comparative Studies of Vertebrate Mitochondrial Carbonic Anhydrase (CA5) Genes and Proteins: Evidence for Gene Duplication in Mammals with CA5A Being Liver Specific and CA5B Broadly Expressed and Located on the X-Chromosome","authors":"R. Holmes","doi":"10.35248/2165-7556.20.11.223","DOIUrl":"https://doi.org/10.35248/2165-7556.20.11.223","url":null,"abstract":"At least fifteen families of mammalian carbonic anhydrases (CA) (E.C. 4.2.1.2) catalyse the hydration of carbon dioxide and related functions. CA5A and CA5B genes encode distinct mitochondrial enzymes and perform essential biochemical roles, including ammonia detoxification and glucose metabolism. Bioinformatic methods were used to predict the amino acid sequences, secondary structures and gene locations for CA5A and CA5B genes and proteins using data from vertebrate genome projects. CA5A and CA5B genes usually contained 7 coding exons for each of the vertebrate genomes examined. Human CA5A and CA5B subunits contained 305 and 317 amino acids, respectively, with key amino acid residues including mitochondrial transit peptides; three Zinc binding sites (His130, His132, His155); and a Tyr164 active site. Phylogenetic analyses of vertebrate CA5 gene families suggested that it is an ancient gene in vertebrate evolution which had undergone a gene duplication event in a mammalian ancestral genome forming the CA5A and CA5B gene families in monotreme, marsupial and eutherian mammals. CA5A was predominantly expressed in liver whereas CA5B had a wide tissue distribution profile, was localized on the X-chromosome and was more highly conserved during mammalian evolution.","PeriodicalId":15630,"journal":{"name":"Journal of Data Mining in Genomics & Proteomics","volume":"16 1","pages":"1-9"},"PeriodicalIF":0.0,"publicationDate":"2020-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"73109229","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Gene Expression Level and Gene Set Enrichment Analysis of Host Genes 宿主基因表达水平及基因集富集分析
Pub Date : 2020-01-01 DOI: 10.35248/2153-0602.20.11.221
Yosuke Kondo, S. Miyazaki
Genome-wide analysis has shown that there are non-protein-coding RNAs (ncRNAs) that are localized on intronic regions of protein-coding genes. The intronic ncRNAs are hosted in introns of protein-coding genes that are referred to as host genes. Our previous study reported genomic features of intronic ncRNA genes and host genes. However, transcriptomic features of host genes have not been investigated. Here we report gene expression level analysis of host genes and investigate biological functions of host genes. Our results showed that gene expression levels of host genes tend to be higher than those of non-host genes. Host genes orthologous between human and mouse have more conserved expression levels than non-host orthologous genes. And host genes with high expression levels involve nervous system, gene expression, protein modification and cytoskeleton whereas there were mostly no enriched biological functions in host genes with low expression levels. These results suggest that host genes have characteristic transcript quantification and biological functions. The characteristics may be useful for further analysis of regulatory ways of host gene expression.
全基因组分析表明,存在定位于蛋白质编码基因内含子区域的非蛋白质编码rna (ncRNAs)。内含子ncrna被寄主在蛋白质编码基因的内含子中,这些基因被称为宿主基因。我们之前的研究报道了内含子ncRNA基因和宿主基因的基因组特征。然而,宿主基因的转录组学特征尚未被研究。本文报道了寄主基因的基因表达水平分析,探讨寄主基因的生物学功能。我们的研究结果表明,宿主基因的基因表达水平倾向于高于非宿主基因。人和小鼠之间的宿主同源基因比非宿主同源基因表达水平更为保守。高表达的宿主基因涉及神经系统、基因表达、蛋白修饰和细胞骨架,而低表达的宿主基因大多没有丰富的生物学功能。这些结果表明,宿主基因具有特有的转录量化和生物学功能。这些特征可为进一步分析宿主基因表达调控途径提供参考。
{"title":"Gene Expression Level and Gene Set Enrichment Analysis of Host Genes","authors":"Yosuke Kondo, S. Miyazaki","doi":"10.35248/2153-0602.20.11.221","DOIUrl":"https://doi.org/10.35248/2153-0602.20.11.221","url":null,"abstract":"Genome-wide analysis has shown that there are non-protein-coding RNAs (ncRNAs) that are localized on intronic regions of protein-coding genes. The intronic ncRNAs are hosted in introns of protein-coding genes that are referred to as host genes. Our previous study reported genomic features of intronic ncRNA genes and host genes. However, transcriptomic features of host genes have not been investigated. Here we report gene expression level analysis of host genes and investigate biological functions of host genes. Our results showed that gene expression levels of host genes tend to be higher than those of non-host genes. Host genes orthologous between human and mouse have more conserved expression levels than non-host orthologous genes. And host genes with high expression levels involve nervous system, gene expression, protein modification and cytoskeleton whereas there were mostly no enriched biological functions in host genes with low expression levels. These results suggest that host genes have characteristic transcript quantification and biological functions. The characteristics may be useful for further analysis of regulatory ways of host gene expression.","PeriodicalId":15630,"journal":{"name":"Journal of Data Mining in Genomics & Proteomics","volume":"53 1","pages":"1-4"},"PeriodicalIF":0.0,"publicationDate":"2020-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"86499454","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Short Commentary on: Absence of Genetic Variation in the Coding Sequence of Myostatin Gene (MSTN) in New Zealand Cattle Breeds 新西兰牛种肌生长抑制素基因(MSTN)编码序列无遗传变异
Pub Date : 2020-01-01 DOI: 10.35248/2153-0602.20.11.222
Ishaku L. Haruna, Huitong Zhou, J. Hickford
The objective of this short commentary is to elaborate on some of the main themes identified in the previously published article entitled “Genetic variation and haplotypic diversity in the myostatin gene of New Zealand cattle breeds”. The absence of genetic variation in the coding sequences of myostatin gene in the New Zealand cattle breeds likely suggests one or more of the effects of selection pressure, cross-breeding and inbreeding and genetic drift.
这篇简短评论的目的是详细阐述先前发表的题为“新西兰牛品种肌肉生长抑制素基因的遗传变异和单倍型多样性”的文章中确定的一些主题。在新西兰牛品种中,肌肉生长抑制素基因编码序列中没有遗传变异,这可能表明选择压力、杂交和近交以及遗传漂变的一种或多种影响。
{"title":"Short Commentary on: Absence of Genetic Variation in the Coding Sequence of Myostatin Gene (MSTN) in New Zealand Cattle Breeds","authors":"Ishaku L. Haruna, Huitong Zhou, J. Hickford","doi":"10.35248/2153-0602.20.11.222","DOIUrl":"https://doi.org/10.35248/2153-0602.20.11.222","url":null,"abstract":"The objective of this short commentary is to elaborate on some of the main themes identified in the previously published article entitled “Genetic variation and haplotypic diversity in the myostatin gene of New Zealand cattle breeds”. The absence of genetic variation in the coding sequences of myostatin gene in the New Zealand cattle breeds likely suggests one or more of the effects of selection pressure, cross-breeding and inbreeding and genetic drift.","PeriodicalId":15630,"journal":{"name":"Journal of Data Mining in Genomics & Proteomics","volume":"11 1","pages":"1-2"},"PeriodicalIF":0.0,"publicationDate":"2020-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81642511","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Data Mining in Genomics and Proteomics for a New Era of Computational Biology 计算生物学新时代的基因组学和蛋白质组学数据挖掘
Pub Date : 2020-01-01 DOI: 10.35248/2153-0602.20.11.E221
S. Daefler
Data mining refers to the processes of discovering large data sets which involves the methods of intersection of statistics, Data base systems and machine learning. Genomics refers to the study of structure, function, evolution, and mapping of genomes. Proteomics refers to study of proteins as proteins are the essential things for the growth of function and growth of living organisms. Data Mining in Genomics and proteomics correlates the interface of computer science along with the biological aspects which paves an easy and essential way for future biological researchers throughout the world.
数据挖掘是指发现大型数据集的过程,涉及统计学、数据库系统和机器学习的交叉方法。基因组学是指对基因组的结构、功能、进化和定位的研究。蛋白质组学是指对蛋白质的研究,因为蛋白质是生物体功能生长和生长所必需的物质。基因组学和蛋白质组学中的数据挖掘将计算机科学与生物学方面的接口联系起来,为未来世界各地的生物学研究人员铺平了一条简单而重要的道路。
{"title":"Data Mining in Genomics and Proteomics for a New Era of Computational Biology","authors":"S. Daefler","doi":"10.35248/2153-0602.20.11.E221","DOIUrl":"https://doi.org/10.35248/2153-0602.20.11.E221","url":null,"abstract":"Data mining refers to the processes of discovering large data sets which involves the methods of intersection of statistics, Data base systems and machine learning. Genomics refers to the study of structure, function, evolution, and mapping of genomes. Proteomics refers to study of proteins as proteins are the essential things for the growth of function and growth of living organisms. Data Mining in Genomics and proteomics correlates the interface of computer science along with the biological aspects which paves an easy and essential way for future biological researchers throughout the world.","PeriodicalId":15630,"journal":{"name":"Journal of Data Mining in Genomics & Proteomics","volume":"3 1","pages":"1-1"},"PeriodicalIF":0.0,"publicationDate":"2020-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"74665495","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Autoantibodies and Apoptosis in Lupus Nephritis by Genetic Association 狼疮性肾炎自身抗体与细胞凋亡的遗传关联
Pub Date : 2020-01-01 DOI: 10.35248/2153-0602.20.S6.004
Tianfu Wu
{"title":"Autoantibodies and Apoptosis in Lupus Nephritis by Genetic Association","authors":"Tianfu Wu","doi":"10.35248/2153-0602.20.S6.004","DOIUrl":"https://doi.org/10.35248/2153-0602.20.S6.004","url":null,"abstract":"","PeriodicalId":15630,"journal":{"name":"Journal of Data Mining in Genomics & Proteomics","volume":"150 1","pages":"1-2"},"PeriodicalIF":0.0,"publicationDate":"2020-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"77384248","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Lupus Nephritis Caused by an Auto Invulnerable Infection from Genomics 狼疮肾炎由基因组学的自免疫感染引起
Pub Date : 2020-01-01 DOI: 10.35248/2153-0602.20.S6.002
Tianfu Wu
{"title":"Lupus Nephritis Caused by an Auto Invulnerable Infection from Genomics","authors":"Tianfu Wu","doi":"10.35248/2153-0602.20.S6.002","DOIUrl":"https://doi.org/10.35248/2153-0602.20.S6.002","url":null,"abstract":"","PeriodicalId":15630,"journal":{"name":"Journal of Data Mining in Genomics & Proteomics","volume":"75 1","pages":"1-2"},"PeriodicalIF":0.0,"publicationDate":"2020-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"76524712","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Action Plans for Medical Professionals to Fight COVID-19 医疗专业人员抗击COVID-19行动计划
Pub Date : 2020-01-01 DOI: 10.35248/2153-0602.20.S6.003
Sasidharan Pk
The medical professionals became more hysterical than the public in behavior. Yes, the real problem was not the virus, but the issues behind the virus, the people who by encroaching into the nature and natural habitats of the animals to produce a new virus, and those who took the wrong decisions due to lack of genuine insight into social health or public health. Public health for most of the decision makers is just about availability of treatment facilities including vaccines and ventilators, which is in fact not. Public health in reality is an issue of empowering the people to live in environment that would enable them to practice good diet and lifestyle and avail all the social determinants of health, including safe drinking water, decent shelter, balanced diet, proper primary education and so on. The reality all over the world, even in Covid-19, is that the marginalized sections had suffered from all diseases and their consequences. Even lack of awareness about healthy living, leave alone the issue of empowerment, is a manifestation of marginalization. I am certain that this is true regarding all the countries, only difference being magnitude of marginalization, and the combination of items left out in the list of necessities would vary from place to place. In this scenario, the medical professionals are facing an unforeseen challenge to look after their patients, their own health, and their family, due to the pandemic. The suggestions and guidelines which are given below are for them and their patients
医务人员在行为上比公众更加歇斯底里。是的,真正的问题不是病毒,而是病毒背后的问题,那些通过侵入自然和动物的自然栖息地来制造新病毒的人,以及那些由于缺乏对社会卫生或公共卫生的真正洞察力而做出错误决定的人。对大多数决策者来说,公共卫生只是关于疫苗和呼吸机等治疗设施的可用性,而事实上并非如此。公共卫生实际上是一个赋予人民权力的问题,使他们能够生活在一个环境中,使他们能够实行良好的饮食和生活方式,并利用健康的所有社会决定因素,包括安全饮用水、体面的住房、均衡的饮食、适当的初等教育等等。世界各地的现实是,即使在2019冠状病毒病期间,边缘化群体也遭受了所有疾病及其后果的折磨。即使缺乏对健康生活的认识,更不用说赋权问题,也是边缘化的一种表现。我确信所有国家都是如此,唯一的区别是边缘化的程度,而必需品清单中遗漏的项目组合因地而异。在这种情况下,由于大流行,医疗专业人员面临着照顾病人、自己的健康和家人的不可预见的挑战。下面给出的建议和指导方针是给他们和他们的病人的
{"title":"Action Plans for Medical Professionals to Fight COVID-19","authors":"Sasidharan Pk","doi":"10.35248/2153-0602.20.S6.003","DOIUrl":"https://doi.org/10.35248/2153-0602.20.S6.003","url":null,"abstract":"The medical professionals became more hysterical than the public in behavior. Yes, the real problem was not the virus, but the issues behind the virus, the people who by encroaching into the nature and natural habitats of the animals to produce a new virus, and those who took the wrong decisions due to lack of genuine insight into social health or public health. Public health for most of the decision makers is just about availability of treatment facilities including vaccines and ventilators, which is in fact not. Public health in reality is an issue of empowering the people to live in environment that would enable them to practice good diet and lifestyle and avail all the social determinants of health, including safe drinking water, decent shelter, balanced diet, proper primary education and so on. The reality all over the world, even in Covid-19, is that the marginalized sections had suffered from all diseases and their consequences. Even lack of awareness about healthy living, leave alone the issue of empowerment, is a manifestation of marginalization. I am certain that this is true regarding all the countries, only difference being magnitude of marginalization, and the combination of items left out in the list of necessities would vary from place to place. In this scenario, the medical professionals are facing an unforeseen challenge to look after their patients, their own health, and their family, due to the pandemic. The suggestions and guidelines which are given below are for them and their patients","PeriodicalId":15630,"journal":{"name":"Journal of Data Mining in Genomics & Proteomics","volume":"15 1","pages":"1-4"},"PeriodicalIF":0.0,"publicationDate":"2020-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"87135338","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of Data Mining in Genomics & Proteomics
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1