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Conditions for nitrification and denitrification by an immobilized heterotrophic nitrifying bacterium Alcaligenes faecalis OKK17 固定化异养硝化细菌粪Alcaligenes faecalis OKK17的硝化和反硝化条件
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(99)89003-5
T. Nishio, T. Yoshikura, H. Mishima, Z. Inouye, H. Itoh
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引用次数: 36
Methane fermentation of pot ale from a whisky distillery after enzymatic or microbial treatment 由威士忌酒厂生产的啤酒经酶或微生物处理后的甲烷发酵
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(98)80068-8
Masatsugu Tokuda , Naotake Ohta , Shigeru Morimura , Kenji Kida

The pot ales of malt whisky (MW) and grain spirit (GS) were subjected to batchwise methane fermentation. The pot ale of GS could be more easily treated than the pot ale of MW. The substantial difference in performance seemed to be due to the amount of dextrin. Therefore, the pot ale of MW was first hydrolyzed enzymatically and treated using the same method. As a result, the treatment time necessary for methane fermentation was shortened from 15 d to 11–12 d. Koji mould was cultivated aerobically in the pot ale of MW as a substitute for enzymatic hydrolysis. The dextrin content of the MW pot ale subjected to enzymatic hydrolysis was only 40% of that achieved by cultivation of koji mould. The supernatant of the culture broth was then treated continuously by methane fermentation using a novel upflow anaerobic filter process (UAFP) reactor. A maximum loading rate of 10.8 g/l/d was achieved, corresponding to a treatment time of only 18 h. The residual dextrin in the supernatant of the culture broth was completely decomposed by methane fermentation, as deduced from the elution curve after gel-permeation chromatography.

对麦芽威士忌(MW)和谷物酒(GS)的桶装啤酒进行了分批次甲烷发酵。GS啤酒比MW啤酒更易处理。表现上的巨大差异似乎是由于糊精的数量。因此,首先对啤酒进行酶解,并采用相同的方法进行处理。结果表明,甲烷发酵所需的处理时间由15 d缩短至11-12 d。曲霉在MW罐内进行好氧培养,替代酶解。经酶解得到的麦芽啤酒糊精含量仅为发酵法的40%。然后利用新型上流式厌氧过滤反应器(UAFP)对发酵液上清液进行甲烷发酵处理。最大加载速率为10.8 g/l/d,处理时间仅为18 h。从凝胶渗透色谱洗脱曲线可以看出,发酵液上清中残留的糊精被甲烷发酵完全分解。
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引用次数: 16
Rational Design for Stabilization and Optimum pH Shift of Serine Protease AprN 丝氨酸蛋白酶AprN稳定性及最佳pH位移的合理设计
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(97)80349-2
A. Masui, Nobuaki Fujiwara, Kazuhiko Yamamoto, M. Takagi, T. Imanaka
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引用次数: 13
An ingenious device for better prediction of bio-processes using a multiple regression model: A case study on glucose isomerase production 使用多元回归模型更好地预测生物过程的巧妙装置:葡萄糖异构酶生产的案例研究
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(98)80049-4
Siriluk Teeradakorn , Michimasa Kishimoto , Pairoh Pinphanichakarn , Toshiomi Yoshida

An ingenious device in the use of a multiple regression analysis model for better prediction of state variable changes in bio-processes is proposed. A correction factor was introduced in the regression equations for the estimation of specific rate parameters taking into account the data distribution resulting in the improvement of the prediction of glucose isomerase production by a Streptomyces fusant during a batch cultivation with periodical monitoring.

提出了一种利用多元回归分析模型更好地预测生物过程中状态变量变化的巧妙装置。考虑到数据分布,在回归方程中引入了一个校正因子,用于估计比速率参数,从而改进了链霉菌融合体在周期性监测的批量培养过程中对葡萄糖异构酶产量的预测。
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引用次数: 0
Trehalose metabolism and leavening ability of bakers' yeast grown in the presence of sodium chloride 在氯化钠存在下生长的面包酵母海藻糖代谢和发酵能力
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(98)80151-7
Nazneen Bagum, Kumio Yokoigawa, Yuka Isobe, Hiroyasu Kawai

We examined the relationship between trehalose metabolism and the leavening ability of bakers' yeast grown in the presence of NaCl. The yeast cells were cultured at 30°C in media (5% glucose, 1% peptone, 0.5% yeast extract, 0.1% KH2PO4, and 0.1% MgSO4) containing 0–3% NaCl. The cells were grown to the stationary phase for 24 h irrespective of the NaCl concentration in the medium, but the cell yield was decreased by addition of NaCl. The presence of 1% NaCl in the medium transiently enhanced the accumulation of intracellular trehalose after 24 h, however, the accumulated trehalose was hydrolyzed during further growth, and 2 or 3% NaCl decreased the intracellular trehalose content. The neutral trehalase activity in yeast cells grown for 24 h increased with increasing NaCl concentration, while the acid trehalase activity decreased. Trehalose-6-phosphate synthase (TPS) activity in cells grown for 24 h increased significantly in the presence of 1 and 2% NaCl, but decreased in the presence of 3% NaCl. When we determined the leavening ability of bakers' yeast cells grown for 24 h in the presence of 0–3% NaCl using dough without addition of NaCl, the leavening ability increased with increasing NaCl concentration in the culture medium. The cells having the highest leavening ability were those that had the lowest amounts of trehalose and the lowest TPS activity among the conditions tested. The leavening ability of bakers' yeast grown in the presence of NaCl appears not to correlate with intracellular trehalose content.

我们研究了在NaCl存在下生长的面包酵母海藻糖代谢与发酵能力之间的关系。酵母细胞在含0-3% NaCl的培养基(5%葡萄糖、1%蛋白胨、0.5%酵母膏、0.1% KH2PO4和0.1% MgSO4)中30℃培养。无论培养基中NaCl浓度如何,细胞均生长至固定期24 h,但NaCl的加入使细胞产量降低。培养基中添加1% NaCl可在24 h后短暂增加细胞内海藻糖的积累,但积累的海藻糖在进一步生长过程中被水解,2或3% NaCl降低了细胞内海藻糖的含量。培养24 h后,酵母细胞中性海藻糖酶活性随NaCl浓度的增加而升高,而酸性海藻糖酶活性则降低。1、2% NaCl处理下,海藻糖-6-磷酸合成酶(TPS)活性显著升高,3% NaCl处理下,TPS活性降低。在0 ~ 3% NaCl条件下,用不添加NaCl的面团对发酵24 h的面包酵母细胞的膨松能力进行测定,膨松能力随培养基中NaCl浓度的增加而增加。在测试的条件下,具有最高发酵能力的细胞是海藻糖含量最低和TPS活性最低的细胞。在NaCl存在下生长的面包酵母的发酵能力似乎与细胞内海藻糖含量无关。
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引用次数: 9
Accumulation of yttrium by Variovorax paradoxus 异黄颡鱼对钇的积累
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(99)80007-5
Manjiroh Kamijo , Tohru Suzuki , Keiichi Kawai , Hironobu Murase

We screened oligotrophic microorganisms for those which were capable of reducing the concentration of yttrium (Y), a representative of the rate-earth elements, in culture medium. From 465 strains of oligotrophic microorganisms (grown on 1100 diluted nutrient agar) isolated from soil and river water samples, 7 strains capable of reducing the concentration of Y in the diluted nutrient broth containing 5 ppm Y were selected. Three strains capable of reducing the concentration of Y to a great extent were identified as Variovorax paradoxus (strain Y-1) and Comamonas acidovorans (strains Y-2 and Y-3). Energy dispersive X-ray analyses revealed that V. paradoxus Y-1 incorporated Y into both the cell and excreted materials. The three strains tended to reduce the concentrations of mostly light rare-earth elements such as La, Ce, Pr and Nd, and intermediate elements such as Tb, Dy, Ho and Er to some extent, but did not reduce the concentrations of heavy elements such as Tm, Yb and Lu. Although V. paradoxus Y-1 could not reduce the concentration of trivalent metal ions such as Fe3+ and Cr3+ (5 ppm) which were added individually to the 1100 diluted nutrient broth, when both Y and Fe3+ or Cr3+ were added to the broth, the concentration of Fe3+ or Cr3+ was reduced concomitantly with that of Y. In the case of divalent metal ions such as Mn2+, Cu2+ and Fe2+, such a phenomenon was not observed. Y induced the production of the extracellular materials by V. paradoxus Y-1, suggesting that Y might affect the physiological activity of this strain.

我们筛选了那些能够降低培养基中钇(Y)浓度的低营养微生物,钇是稀土元素的代表。从土壤和河流水样中分离得到465株寡营养微生物(生长在1100株稀释的营养琼脂上),在含有5 ppm Y的稀释营养肉汤中选择了7株能降低Y浓度的菌株。鉴定出了3株能大幅度降低Y浓度的菌株,分别是异变单胞菌(Variovorax paradoxus, Y-1)和嗜酸单胞菌(Comamonas acidovorans, Y-2和Y-3)。能量色散x射线分析显示,V. paradoxus Y-1将Y结合到细胞和排泄物质中。3株菌株均有一定程度降低La、Ce、Pr、Nd等轻稀土元素和Tb、Dy、Ho、Er等中间元素浓度的趋势,但对Tm、Yb、Lu等重元素浓度没有降低作用。虽然V. paradoxus Y-1不能降低单独添加到1100稀释的营养液中的三价金属离子Fe3+和Cr3+ (5 ppm)的浓度,但当同时添加Y和Fe3+或Cr3+时,Fe3+或Cr3+的浓度与Y同时降低,而添加Mn2+、Cu2+和Fe2+等二价金属离子时,则未观察到这种现象。Y诱导V. paradoxus Y-1产生胞外物质,提示Y可能影响该菌株的生理活性。
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引用次数: 21
Molecular cloning of xylanase gene xynG1 from Aspergillus oryzae KBN 616, a Shoyu Koji Mold, and analysis of its expression 米曲霉KBN 616木聚糖酶基因xynG1的克隆及表达分析
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(97)80346-7
Tetsuya Kimura, N. Kitamoto, Y. Kito, S. Karita, K. Sakka, K. Ohmiya
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引用次数: 26
Intructions to authors 对作者的说明
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(98)80051-2
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引用次数: 0
Controlled expression of lysis genes encoded in T4 phage for the gentle disruption of Escherichia coli cells 控制T4噬菌体裂解基因的表达对大肠杆菌细胞的温和破坏
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(97)80357-1
Yasunori Tanji, Kazuhiro Asami, Xin-Hui Xing, Hajime Unno

Two lysis genes, gene-t and gene-e, encoded in bacteriophage T4 were cloned in vectors pUC118 and pET26b(+), respectively. Immediately after the induction of gene-t expression, growth of Escherichia coli JM 109 cells was halted. Since the expression of gene-t was toxic to the cells, the expressed gene-t product (gp-t) could not be detected by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). On the other hand, expression of gene-e cloned in vector plasmid pUC118 did not give rise to any detectable change in E. coli JM 109 cells; normal cell growth was observed, and the gene-e product (gp-e) was identified by SDS-PAGE. Lysis genes cloned in vector pET26b(+) were expressed in BL21 (DE3) host cells carrying plasmid pLysS, which encodes T7 lysozyme. It is thought that the expressed protein is translocated into the periplasmic space driven by the signal peptide of the peIB outermembrane protein of E. coli fused in the frame at the N-terminal end of the lysis protein. Immediate cell disruption was observed when the gene-t cloned in pET26b(+) was expressed in the logarithmic growth phase. β-Galactosidase activity was observed in the centrifuged supernatant of the cell culture producing gp-t. Almost 100% of the activity of the β-galactosidase produced in the BL21(DE3)pLysS cells was identified in the supernatant 30 min after the start of the induction period of gene-t, indicating that complete cell disruption had occurred at that time. The production of gp-e with the N-terminal fusion of the signal peptide of pelB did not cause immediate cell lysis, but it did result in a morphological change in the BL21(DE3)pLysS cells, from rod-shaped to elliptical. Resuspension of the gp-e-producing BL21(DE3)pLysS cell nellet with pure water caused cell lysis followed by the release of β-galactosidase into the medium. Almost 100% of the β-galactosidase activity was identified in the resuspended supernatant.

将噬菌体T4中编码的裂解基因-t和基因-e分别克隆到pUC118和pET26b(+)载体上。诱导基因-t表达后,大肠杆菌jm109细胞立即停止生长。由于基因-t的表达对细胞有毒性,因此通过十二烷基硫酸钠-聚丙烯酰胺凝胶电泳(SDS-PAGE)无法检测到表达的基因-t产物(gp-t)。另一方面,在载体质粒pUC118中克隆的基因-e在大肠杆菌jm109细胞中的表达没有引起任何可检测到的变化;观察正常细胞生长情况,SDS-PAGE鉴定基因-e产物(gp-e)。在载体pET26b(+)中克隆的裂解基因在携带编码T7溶菌酶的质粒pLysS的BL21 (DE3)宿主细胞中表达。据推测,表达的蛋白是在大肠杆菌peIB外膜蛋白的信号肽的驱动下,在裂解蛋白的n端融合在框架内,从而易位到质周间隙。当在pET26b(+)中克隆的基因-t在对数生长期表达时,观察到细胞立即破坏。在产生gp-t细胞培养的离心上清中观察β-半乳糖苷酶活性。BL21(DE3)pLysS细胞产生的β-半乳糖苷酶活性在基因-t诱导期开始30 min后的上清中几乎100%被鉴定出来,这表明此时细胞已经完全破坏。pelB的信号肽n端融合产生gp-e不会立即引起细胞裂解,但它确实导致BL21(DE3)pLysS细胞的形态变化,从杆状变为椭圆形。用纯水重悬产生gp-e的BL21(DE3)pLysS细胞,引起细胞裂解,随后β-半乳糖苷酶释放到培养基中。重悬上清中几乎100%的β-半乳糖苷酶活性被确定。
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引用次数: 19
Molecular cloning of xylanase gene xynG1 from Aspergillus oryzae KBN 616, a shoyu koji mold, and analysis of its expression 米曲霉KBN 616木聚糖酶基因xynG1的克隆及表达分析
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(97)80346-7
Tetsuya Kimura , Noriyuki Kitamoto , Yukio Kito , Shuichi Karita , Kazuo Sakka , Kunio Ohmiya

A xylanase gene xynG1 was isolated and sequenced from Aspergillus oryzae KBN616 used for making shoyu koji. The structural part of the xynG1 gene was found to be 725 bp and was predicted to be interrupted by a single intron which was 62 bp in size. The mature XynG1 was predicted to be 189 amino acids in size and had high amino acid homology to other fungal xylanases classified in family 11 glycosidase. The XynG1 was detected in the culture supernatant of A. oryzae KBN616 grown in xylan medium but was not detected when A. oryzae KBN616 was grown in glucose medium. The xynG1 gene was introduced into A. nidulans and was found to be expressed even in the glucose media. This expression pattern was confirmed using a luciferase gene as a reporter in A. nidulans.

从米曲霉KBN616中分离到木聚糖酶基因xynG1并进行了序列测定。xynG1基因的结构部分长度为725bp,预计会被一个大小为62bp的内含子打断。成熟菌株xing1的氨基酸大小为189个氨基酸,与11家族的其他真菌木聚糖酶具有较高的氨基酸同源性。在木聚糖培养基中培养的A. oryzae KBN616的培养上清中检测到XynG1,而在葡萄糖培养基中未检测到XynG1。将xynG1基因导入到假木兰花中,发现其在葡萄糖培养基中也能表达。用荧光素酶基因作为报告基因,证实了这种表达模式。
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引用次数: 26
期刊
Journal of Fermentation and Bioengineering
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