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Cloning, nucleotide sequence, and transcriptional analysis of Aspergillus aculeatus no. F-50 cellobiohydrolase I (cbhI) gene 刺曲霉的克隆、核苷酸序列及转录分析。F-50纤维生物水解酶I (cbhI)基因
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(97)80345-5
Goro Takada, Takashi Kawaguchi, Jun-Ichi Sumitani, Motoo Arai

The cbhI gene, coding for a major cellobiohydrolase (CBHI) of Aspergillus aculeatus, was cloned and sequenced. The gene consists of 1620-bp and encodes a protein containing 540 amino acids with a calculated molecular mass of 56,723 Da. CBHI, composed of an N-terminal catalytic domain belonging to family 7 of the glycosyl hydrolases, and a C-terminal cellulose-binding domain (CBD) belonging to family I of the CBDs, showed high similarity with other fungal CBHIs, especially with that of Penicillium janthinellum. The cbhI gene transcription start points in A. aculeatus were defined by primer extension, and the putative promoter sequence was analyzed. This sequence was found to be closely related to the consensus sequences of various fungal genes. Transcription analysis by ribonuclease protection assay revealed that the cbhI gene is induced by low-molecular-weight cellooligosaccharide and repressed by glucose. The results emphasize the possibility that in the A. aculeatus cellulase system, cellobiose is the true inducer and the role of the cbhI gene lies within the cascade regulating cellulase induction.

克隆并测序了针状曲霉(Aspergillus aculeatus)一种主要纤维生物水解酶(cbhI)的基因。该基因由1620 bp组成,编码一种含有540个氨基酸的蛋白质,计算出的分子质量为56,723 Da。cbi由糖基水解酶家族7的n端催化结构域和家族I的c端纤维素结合结构域(CBD)组成,与其他真菌的CBHIs具有高度的相似性,尤其是与青霉菌(Penicillium janthinellum)。通过引物延伸确定了针叶鱼cbi基因的转录起始点,并对可能的启动子序列进行了分析。该序列与多种真菌基因的共识序列密切相关。核糖核酸酶保护实验转录分析表明,cbi基因受低分子低聚糖诱导,受葡萄糖抑制。这些结果强调了在刺草纤维素酶系统中,纤维素二糖是真正的诱导剂的可能性,而cbhI基因的作用在于级联调节纤维素酶的诱导。
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引用次数: 22
Procedure for biomass estimation considering the change in biomass volume during high density culture of hairy roots 考虑毛状根高密度培养过程中生物量变化的生物量估算程序
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(98)80095-0
Kyung-Hee Jung, Sang-Soo Kwak, Jang R. Liu

The biomass concentration in a bubble column reactor was estimated by analyzing the conductivity change during high-density culture of Catharanthus roseus hairy roots. The accumulated biomass in the reactor was estimated from the amount of nutrients consumed, which were present in the liquid medium. Liquid medium, consisting of water and nutrients, was incorporated into the biomass, in proportion to the growth of hairy roots, consequently the ratio of the volume of liquid medium to the volume of the biomass decreased continuously. To evaluate nutrient consumption, the change in biomass volume in the reactor was introduced as a new parameter for biomass estimation. After 45 d of culture, the final concentration of hairy roots was 46.5 g dry wt./l, of which the biomass volume is about 40% of the total culture volume of the reactor. A conventional conductivity method, in which the volume change of the liquid medium was not considered, resulted in a deviation (55.76 g dry wt./l) of about 20% from the actual biomass. This procedure yielded a value of 47.1 g dry wt./l of hairy roots, which is a nearly accurate estimation of the biomass concentration. This result suggests that the volume reduction of liquid medium should be considered for biomass estimation and process control for high-density plant cell cultures.

通过分析花楸毛状根高密度培养过程中电导率的变化,估算了泡塔反应器中生物量的浓度。反应器中积累的生物量是根据存在于液体介质中的营养物质的消耗量来估计的。在生物量中加入由水和营养物质组成的液体培养基,与毛状根的生长成比例,因此液体培养基的体积与生物量的体积之比不断减小。为了评估养分消耗,将反应器内生物量的变化作为估算生物量的新参数。培养45 d后,毛状根终浓度为46.5 g干wt./l,其生物量约占反应器总培养体积的40%。传统的电导率法,在不考虑液体介质体积变化的情况下,与实际生物量的偏差(55.76 g干wt./l)约为20%。这个过程产生了47.1 g干重/升毛状根的值,这是一个几乎准确的生物量浓度估计。这一结果表明,在高密度植物细胞培养过程中,应考虑减少液体培养基的体积来估算生物量和控制过程。
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引用次数: 7
Purification and characterization of component B of a soluble methane monooxygenase from Methylocystis sp. M 甲基藻可溶性甲烷单加氧酶B组分的纯化及特性研究
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(97)80350-9
Y. Shinohara, H. Uchiyama, O. Yagi, I. Kusakabe
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引用次数: 14
Ethanol-induced water stress and fungal growth 乙醇诱导水分胁迫和真菌生长
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(98)80150-5
John E. Hallsworth, Yoshiyuki Nomura, Masayoshi Iwahara

Fungal growth inhibition by ethanol was compared with that caused by five other agents of water stress (at 25, 40 and 42.5°C), using Aspergillus oryzae. Ethanol, KCl, glycerol, glucose, sorbitol, and polyethylene glycol 400 were incorporated into media at concentrations corresponding to water activity (aw) values in the range 1 to 0.75. Generally, as temperature increased there was a decrease in the aw value at which optimum growth occurred. The aw limit for growth on KCl, glycerol, glucose, sorbitol, or polyethylene glycol 400 media was about 0.85, regardless of temperature. However, the aw limit for growth on ethanol media varied between 0.97 and 0.99 aw and was temperature-dependent. Water stress accounted for up to 31, 18 and 6% of growth inhibition by ethanol at 25, 40, and 42.5°C, respectively. For media containing ethanol, the decrease in growth rate per unit of aw reduction was greater as temperature increased. However, ethanol-induced water stress remained constant regardless of temperature, suggesting that other inhibitory effects of ethanol are closely temperature-dependent. Water stress may account for considerably more than 30% of growth inhibition by ethanol in cells that remain metabolically active at higher ethanol concentrations.

以米曲霉(Aspergillus oryzae)为实验对象,比较了乙醇与其他5种水分胁迫剂(25、40和42.5℃)对真菌生长的抑制作用。将乙醇、氯化钾、甘油、葡萄糖、山梨醇和聚乙二醇400以相应的水活度(aw)值(范围为1至0.75)加入培养基中。一般来说,随着温度的升高,发生最佳生长的aw值减小。无论温度如何,KCl、甘油、葡萄糖、山梨醇或聚乙二醇400培养基上的生长极限约为0.85。然而,在乙醇培养基上生长的aw极限在0.97和0.99 aw之间变化,并且与温度有关。在25、40和42.5°C条件下,水分胁迫对乙醇生长抑制的贡献率分别高达31.8%、18%和6%。对于含有乙醇的培养基,随着温度的升高,单位aw还原速率的下降幅度更大。然而,无论温度如何,乙醇诱导的水分胁迫保持不变,这表明乙醇的其他抑制作用与温度密切相关。在较高乙醇浓度下保持代谢活性的细胞中,水分胁迫可能占乙醇对生长抑制的30%以上。
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引用次数: 68
The importance of ionic strength as a parameter in screening peptide ligands from a phage display library 离子强度作为筛选噬菌体展示文库中肽配体的参数的重要性
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(98)80093-7
Yoshio Katakura, Eun Tae Lim, Setsuo Tsujii, Takeshi Omasa, Ken-Ichi Suga

Peptide ligands which bound to a model monomeric protein, bovine pancreatic ribonuclease A, could be isolated from a constrained random hexapeptide phage library. Selection was successful in a low ionic strength buffer (10 mM sodium phosphate, pH 6.0), whereas it failed in TBS (50 mM Tris-Cl, 150 mM NaCl, pH 7.5). Two of the displayed amino acid sequences from among the clones isolated were AEGACEQLDYNC and AEGACLWHDQLC. Electrostatic interaction appeared to play an important role in the binding because these phages could not bind to RNase A at a high ionic strength. The results suggest that selection in low ionic strength buffers could make possible the isolation of peptide ligands against proteins of interest which do not originally interact with another peptide or protein.

从约束的随机六肽噬菌体文库中分离出与模型单分子蛋白牛胰腺核糖核酸酶a结合的肽配体。选择在低离子强度缓冲液(10 mM磷酸钠,pH 6.0)中成功,而在TBS (50 mM Tris-Cl, 150 mM NaCl, pH 7.5)中失败。其中显示的氨基酸序列为AEGACEQLDYNC和AEGACLWHDQLC。静电相互作用似乎在结合中起重要作用,因为这些噬菌体不能在高离子强度下与RNase A结合。结果表明,在低离子强度缓冲液中选择可能使肽配体分离针对感兴趣的蛋白质,这些蛋白质最初不与另一肽或蛋白质相互作用。
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引用次数: 2
Purification and characterization of β-N-acetylhexosaminidase from Streptomyces sp. no. 499 链霉菌β- n -乙酰己糖氨酸酶的纯化及特性研究。499
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(98)80110-4
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引用次数: 0
Key work index 关键工作指标
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(99)89021-7
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引用次数: 0
Improved ε-poly-l-lysine production of an S-(2-aminoethyl)-l-cysteine resistant mutant of Streptomyces albulus 白链霉菌S-(2-氨基乙基)-l-半胱氨酸抗性突变体ε-聚赖氨酸产量的提高
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(99)80023-3
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引用次数: 0
Removal of mercury ion by the moss Pohlia flexuosa 苔藓对汞离子的去除作用
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(98)80061-5
Mitsuyo Kondoh , Masanori Fukuda , Masayuki Azuma , Hiroshi Ooshima , Jyoji Kato

The moss Pohlia flexuosa was obtained as the protonema from its matured capsules. It was grown by shaking in modified Murashige-Skoog's medium, and the dry weight obtained was 40 mg per 20 ml medium after 15 d. The mature protonema removed Hg2+ from aqueous solutions. The higher the initial Hg2+ concentration, the higher the amount of Hg2+ removed, and the concentration factor, which is an indicator of the ability to remove heavy metals, was 2000 ml/g of dry moss at 50 μg/ml of HgCl2. The optimal pH and temperature for Hg2+ removal were 7.0 and 25°C, respectively. Sodium azide and dinitrophenol at 0.1 mM inhibited Hg2+ removal up to a relative removal of 81 and 77%, respectively. The importance of two processes, bioaccumulation and adsorption, in the removal of Hg2+ by this moss is discussed.

从苔藓的成熟蒴果中获得了原丝体。在改良的Murashige-Skoog培养基中摇培养,15 d后得到的干重为每20 ml培养基40 mg。成熟的原丝体从水溶液中去除Hg2+。初始Hg2+浓度越高,Hg2+去除率越高,在50 μg/ml的Hg2+浓度下,干苔藓的浓度因子为2000 ml/g,是衡量其对重金属去除率的指标。去除Hg2+的最佳pH和温度分别为7.0℃和25℃。叠氮化钠和二硝基苯酚在0.1 mM下对Hg2+的相对去除率分别达到81%和77%。讨论了生物积累和吸附两个过程在该苔藓去除Hg2+中的重要性。
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引用次数: 11
Nitrogen removal and N2O emission in a full-scale domestic wastewater treatment plant with intermittent aeration 间歇式曝气生活污水处理厂氮去除及N2O排放研究
Pub Date : 1998-01-01 DOI: 10.1016/S0922-338X(98)80114-1
Yuzuru Kimochi , Yuhei Inamori , Motoyuki Mizuochi , Kai-Qin Xu , Masatoshi Matsumura

Nitrous oxide (N2O) is emitted from wastewater treatment processes. It is known as a greenhouse gas that contributes to global warming (over 200 times more per molecule than carbon dioxide) and to the destruction of the ozone layer. It is therefore of great importance to develop technology that can suppress N2O emission. The effects of an anoxic period on N2O emission and nitrogen removal were investigated in an actual domestic wastewater treatment plant. When operated with intermittent aeration, most of the N2O was emitted into the atmosphere during the aerobic period. N2O emission from the intermittent process was estimated to be 0.43–1.89 g N2O person−1 year−1. Maintaining a dissolved oxygen (DO) concentration of over 0.5 mg l−1 during the aerobic period resulted in the complete conversion of the influent NH4-N to NO3-N and a 60-min anoxic period was sufficient for denitrification to be completed. The findings show that an optimum combination of aerobic and anoxic conditions and their suitable control are very important for improving nitrogen removal efficiency and controlling N2O emission.

一氧化二氮(N2O)是从废水处理过程中排放出来的。众所周知,它是一种温室气体,会导致全球变暖(每分子比二氧化碳多200多倍),并破坏臭氧层。因此,开发抑制N2O排放的技术具有重要意义。在实际生活污水处理厂中,研究了缺氧周期对N2O排放和氮去除的影响。间歇曝气时,大部分N2O在好氧期排放到大气中。间歇过程的N2O排放量估计为0.43-1.89 g N2O人−1年−1。在好氧期间,将溶解氧(DO)浓度维持在0.5 mg l - 1以上,可使进水NH4-N完全转化为NO3-N, 60分钟的缺氧期足以完成反硝化。结果表明,好氧和缺氧条件的最佳组合及其控制对提高脱氮效率和控制N2O排放具有重要意义。
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引用次数: 185
期刊
Journal of Fermentation and Bioengineering
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