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Establishment of a Hybrid Snakehead Spleen Cell Line for Viral Studies. 用于病毒研究的杂交蛇头脾细胞系的建立。
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2025-12-06 DOI: 10.1111/jfd.70096
Xuanming Liu, Qing Wang, Xiudong Guo, Yingying Li, Xubing Mo, Jiyuan Yin, Shucheng Zheng, Jian Zhao, Xidong Mu, Yingying Wang

A spleen-derived cell line was established from the spleen of hybrid snakehead (♀Channa argus × ♂Channa maculata) (abbreviated as CAMsp), a species of considerable economic importance in China's freshwater aquaculture, which is severely impacted by the hybrid snakehead rhabdovirus (HSHRV), largemouth bass ranavirus (LMBV), and infectious spleen and kidney necrosis virus (ISKNV). The establishment of a stable in vitro culture system is imperative for the effective isolation, identification, and study of fish viruses. CAMsp, generated through trypsin digestion, had successfully undergone over 80 passages since its initial culture. This cell line exhibited rapid proliferation in Leibovitz's-15 medium (L-15) supplemented with 10% fetal bovine serum at 28°C, achieving monolayer formation within 24 h at a passage ratio of 1:3. Chromosomal analysis of CAMsp at the 60th passage identified a chromosome count of 42; the chromosome number in hybrid snakehead somatic cells is 44, 45, or 46, suggesting chromosomal alterations. Inoculation of CAMsp monolayers with HSHRV, LMBV, and ISKNV resulted in characteristic cytopathic effects (CPE), including cell rounding, aggregation, and eventual detachment. Transmission electron microscopy (TEM) confirmed viral replication and revealed extensive cytopathological changes within the infected cells, demonstrating the susceptibility of the CAMsp cell line to all three viruses. Viral titers, determined by TCID50 assay at 7 days post-infection (dpi), reached 109.25 ± 100.36 TCID50/mL for LMBV, 106·15 ± 100.25 TCID50/mL for ISKNV, and 108·33 ± 100.12 TCID50/mL for HSHRV, indicating efficient viral propagation in this cell line. The CAMsp cell line serves as a valuable model for studying certain fish viruses, virus-host interactions, and disease prevention strategies.

摘要以杂交蛇头(♀Channa argus ×♂Channa maculata)(简称CAMsp)的脾脏为材料,建立了脾脏源细胞系,该物种在中国淡水水产养殖中具有重要的经济价值,严重受到杂交蛇头横纹病病毒(HSHRV)、大口鱼拉纳病毒(LMBV)和传染性脾肾坏死病毒(ISKNV)的影响。建立稳定的体外培养体系是有效分离、鉴定和研究鱼类病毒的必要条件。通过胰蛋白酶消化产生的CAMsp自初始培养以来已成功经历了80多次传代。该细胞系在添加10%胎牛血清的Leibovitz's-15培养基(L-15)中增殖迅速,在28℃条件下以1:3的传代比在24 h内形成单层细胞。对第60代CAMsp进行染色体分析,染色体数为42;杂交蛇头体细胞的染色体数目为44、45或46,表明染色体发生了改变。用HSHRV、LMBV和ISKNV接种CAMsp单层导致特征性的细胞病变效应(CPE),包括细胞变圆、聚集和最终脱离。透射电子显微镜(TEM)证实了病毒复制,并在感染细胞内发现了广泛的细胞病理学变化,证明了CAMsp细胞系对所有三种病毒的易感性。感染后7天(dpi),通过TCID50测定病毒滴度,LMBV为109.25±100.36 TCID50/mL, ISKNV为106·15±100.25 TCID50/mL, HSHRV为108·33±100.12 TCID50/mL,表明病毒在该细胞系中增殖有效。CAMsp细胞系为研究某些鱼类病毒、病毒-宿主相互作用和疾病预防策略提供了有价值的模型。
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引用次数: 0
Persistence and Organ Tropism of Filoviruses in Farmed European Perch (Perca fluviatilis). 养殖欧洲鲈鱼丝状病毒的持久性和器官趋向性。
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2025-12-06 DOI: 10.1111/jfd.70105
Johanna Perschthaler, Nicole Wildi, Lena K Matthiss, Torsten Seuberlich, Heike Schmidt-Posthaus
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引用次数: 0
Development of an RPA-CRISPR-Cas12a Fluorescence Assay for Rapid and Sensitive Detection of Tilapia Parvovirus (TiPV). RPA-CRISPR-Cas12a荧光法快速灵敏检测罗非鱼细小病毒(TiPV)的建立
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2025-12-02 DOI: 10.1111/jfd.70095
Chu Ma, Yong Zhou, Nan Jiang, Xin Ren, Chen Xu, Na Su, Yuding Fan, Wenzhi Liu

Tilapia parvovirus (TiPV) is an emerging pathogen associated with high mortality rates in farmed tilapia, highlighting the urgent need for rapid and accurate diagnostic tools. In this study, we established an RPA-CRISPR/Cas12a detection system targeting the TiPV NS1 gene. The assay conditions were systematically optimised, including 15-min RPA amplification at 39°C, with reagent concentrations of 200 nM Cas12a, 250 nM crRNA and 200 nM ssDNA reporter. Specificity tests showed no cross-reactivity with other tilapia pathogens (TiLV, S. agalactiae) and other aquatic pathogens (LMBRaV, YcCV, GCRV II, WSSV, CyHV-2, SVCV). Sensitivity evaluation revealed a limit of detection (LoD) of 1.97 × 101copies/μL, which was 100-fold more sensitive than PCR (1.97 × 103copies/μL). Clinical validation with 20 tilapia samples demonstrated a 50% positive detection rate for RPA-CRISPR/Cas12a, 15% higher than PCR (35%). This integrated method combines the advantages of RPA and CRISPR-based signal transduction, offering a field-applicable solution for TiPV monitoring in resource-limited aquaculture environments.

罗非鱼细小病毒(TiPV)是一种新出现的病原体,与养殖罗非鱼的高死亡率有关,突出表明迫切需要快速和准确的诊断工具。本研究建立了针对TiPV NS1基因的RPA-CRISPR/Cas12a检测系统。系统优化检测条件,在39℃条件下,Cas12a试剂浓度为200 nM, crRNA试剂浓度为250 nM, ssDNA报告基因试剂浓度为200 nM, RPA扩增15 min。特异性试验显示,与其他罗非鱼病原体(TiLV、S. agalactiae)和其他水生病原体(LMBRaV、YcCV、GCRV II、WSSV、CyHV-2、SVCV)无交叉反应。检测限为1.97 × 101copies/μL,灵敏度为PCR (1.97 × 103copies/μL)的100倍。20份罗非鱼样本的临床验证表明,RPA-CRISPR/Cas12a的阳性检出率为50%,比PCR(35%)高15%。该综合方法结合了RPA和基于crispr的信号转导的优势,为资源有限的水产养殖环境中TiPV的监测提供了一种适用于现场的解决方案。
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引用次数: 0
Freeze-Dried Lactiplantibacillus plantarum Regulates Formation of Extracellular Traps in Penaeus vannamei Ex Vivo. 冻干植物乳杆菌体外调控凡纳滨对虾胞外陷阱的形成。
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2025-11-28 DOI: 10.1111/jfd.70092
John Paul Matthew Domingo Guzman, Claudio Gargano, Mikio Aoki, Hiroshi Kuwahara, Keiichiro Koiwai, Hidehiro Kondo, Ikuo Hirono

The formation of extracellular traps (ETosis) is an innate immune mechanism in shrimp against pathogens. Microorganisms are entrapped in extruded DNA fibres co-localised with antimicrobial peptides and eventually killed. However, as a cell death mechanism, its strict regulation is essential as excessive formation of ETs may cause detrimental effects to the host by contributing to disease pathophysiology. Here, we investigated the ability of freeze-dried Lactiplantibacillus plantarum (FD-LAB), previously reported to enhance shrimp immunity against pathogenic infections, to regulate ETosis. In an ex vivo setup, gill cells and circulating hemocytes were pre-exposed to FD-LAB and were then stimulated with Vibrio parahaemolyticus. Results showed that V. parahaemolyticus alone induced ETosis in both gill cells and circulating hemocytes, while FD-LAB alone did not. However, when cells were pre-exposed to FD-LAB prior to stimulation with V. parahaemolyticus, no ETosis occurred. Similarly, changes in reactive oxygen species (ROS) production coincided with the formation of ETs, thus signifying that FD-LAB may regulate ETosis in shrimp gill cells and circulating hemocytes possibly by dampening ROS production. These results present a novel means to regulate ETosis and indicate that FD-LAB may enhance shrimp immunity while also acting on immune regulation.

胞外陷阱(ETosis)的形成是虾对病原体的先天免疫机制。微生物被包裹在与抗菌肽共定位的挤压DNA纤维中,并最终被杀死。然而,作为一种细胞死亡机制,它的严格调控是必不可少的,因为过多的ETs形成可能通过促进疾病病理生理对宿主造成有害影响。在这里,我们研究了冷冻干燥的植物乳杆菌(FD-LAB)调节ETosis的能力,之前报道过它可以增强对虾对致病性感染的免疫力。在离体实验中,将鳃细胞和循环血细胞预先暴露于FD-LAB中,然后用副溶血性弧菌刺激。结果表明,副溶血性弧菌对鳃细胞和循环血细胞均有诱导作用,而FD-LAB对鳃细胞和循环血细胞无诱导作用。然而,当细胞在副溶血性弧菌刺激之前预先暴露于FD-LAB时,没有发生ETosis。同样,活性氧(ROS)产生的变化与ETs的形成一致,这表明FD-LAB可能通过抑制ROS的产生来调节虾鳃细胞和循环血细胞的ettosis。这些结果为调节ETosis提供了一种新的途径,表明FD-LAB可能在增强对虾免疫的同时还具有免疫调节作用。
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引用次数: 0
One-Pot RT-LAMP CRISPR/Cas12b Platform for Rapid Detection of Tilapia Lake Virus. 罗非鱼湖病毒单锅RT-LAMP CRISPR/Cas12b快速检测平台
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2025-11-28 DOI: 10.1111/jfd.70087
Dorothea V Megarani, Lilia Yang, Hannah J Siler, Eva M Quijano Cardé, Christopher J Martyniuk, Paul M Hick, Joy A Becker, Esteban Soto, Win Surachetpong, Roy P E Yanong, Kuttichantran Subramaniam

Tilapia Lake Virus (TiLV) is a significant threat to global tilapia aquaculture, highlighting the need for rapid and accurate diagnostic methods to manage outbreaks and minimise economic losses. This study presents the development and partial validation of a one-pot assay integrating RT-LAMP with the CRISPR/Cas12b system for sensitive and specific TiLV detection. This assay amplifies viral RNA using RT-LAMP, while CRISPR/Cas12b enables a real-time detectable signal. Targeting a conserved region in TiLV segment four, the assay achieves results within 75 min at 62°C, with easy visualisation using a portable fluorescence viewer. It demonstrated high sensitivity, with a 95% limit of detection of 79.6 copies (95% CI: 48-132 copies), and high specificity, with no cross-reaction to other fish RNA or DNA viruses. Based on a validation panel of 261 samples from 9 source populations, the assay exhibited 92% diagnostic sensitivity (95% CI: 87%-96%) and 100% diagnostic specificity (95% CI: 97%-100%). When assessed as a non-lethal sample, gills provided a reliable and less invasive alternative despite lower viral loads compared to internal organs. Therefore, this partially validated one-pot assay is potentially practical for enhancing TiLV detection and disease management in aquaculture systems, especially in field settings and resource-limited laboratories.

罗非鱼湖病毒(TiLV)是对全球罗非鱼水产养殖的重大威胁,强调需要快速和准确的诊断方法来管理疫情并尽量减少经济损失。本研究提出了一种结合RT-LAMP和CRISPR/Cas12b系统的单锅检测方法的开发和部分验证,用于敏感和特异性的TiLV检测。该检测使用RT-LAMP扩增病毒RNA,而CRISPR/Cas12b则可以实时检测信号。针对TiLV第四段的一个保守区域,该分析在62°C下75分钟内获得结果,使用便携式荧光观察器易于可视化。该方法灵敏度高,95%的检测限为79.6个拷贝(95% CI: 48-132个拷贝),特异性高,与其他鱼类RNA或DNA病毒无交叉反应。基于来自9个源群体的261个样本的验证小组,该检测显示出92%的诊断敏感性(95% CI: 87%-96%)和100%的诊断特异性(95% CI: 97%-100%)。当被评估为非致死样本时,尽管与内部器官相比病毒载量较低,但鳃提供了可靠且侵入性较小的替代方法。因此,这种经过部分验证的单锅试验对于加强水产养殖系统中TiLV的检测和疾病管理具有潜在的实用性,特别是在现场环境和资源有限的实验室中。
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引用次数: 0
Freeze Tolerance of Amyloodinium ocellatum (Myzozoa: Blastodiniales). 细胞淀粉的抗冻性(Myzozoa:囊胚目)。
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2025-11-27 DOI: 10.1111/jfd.70088
Robert D Gonzales, Haley R Dutton, Reginald B Blaylock, Stephen A Bullard, Eric A Saillant

Amyloodinium ocellatum causes epizootics in marine fish hatcheries. Frozen, wild fish, often used as food in aquaculture, could introduce the disease. We investigated the parasite's ability to survive, reproduce and infect a host after freezing. Infected gills were frozen at -20°C for either 0, 24, 36, 48, or 72 h. Parasite viability was assessed first by placing thawed infected gills into tanks with naïve fish. Gills of the exposed fish were examined on day 0 and on days 4 and 7 post-exposure. Tomonts from infected gills in all freeze durations produced infections. However, dinospore production decreased and infections took longer to establish in fish exposed to tomonts from the 72 h treatment. Second, eight tomonts from each freeze duration were placed in 5 mL of 25 ppt artificial seawater at 22°C in individual wells of a 12-well plate and monitored for hatching. Ninety seven percent of tomonts from all treatments hatched. Tomonts frozen for up to 72 h survived, reproduced and infected fish, but dinospore production decreased as freeze duration increased. Extrapolation from the rate of reduction in dinospore production over the freeze durations tested suggests that a freeze duration of 237 h could inactivate all tomonts.

在海鱼孵化场中,细胞淀粉虫引起动物流行病。冷冻的野生鱼类,经常被用作水产养殖的食物,可能会引入这种疾病。我们研究了这种寄生虫在冷冻后的生存、繁殖和感染宿主的能力。感染的鳃在-20°C冷冻0、24、36、48或72小时。首先通过将解冻的受感染的鳃放入naïve鱼的水箱中来评估寄生虫的生存能力。暴露后第0天、第4天和第7天检查鱼鳃。在所有冻结时间内,来自受感染鳃的包囊均产生感染。然而,从72小时的处理中,暴露于包囊的鱼的恐龙孢子产量下降,感染需要更长的时间才能建立。其次,在12孔板的单个孔中,将每个冻结期的8个月放入5 mL 25 ppt的22°C人工海水中,并监测孵化情况。所有处理中97%的包囊孵化。包囊冷冻72小时后存活、繁殖并感染鱼类,但随着冷冻时间的延长,恐龙孢子的产量下降。根据冷冻时间对恐龙孢子产量减少率的推断,237小时的冷冻时间可以使所有包囊灭活。
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引用次数: 0
First Description and Characterisation of Lactococcus garvieae Strains Causing Septicaemic Disease in Farmed Sea Bass (Dicentrarchus labrax; Linnaeus) in Spain. 西班牙养殖鲈鱼(Dicentrarchus labrax; Linnaeus)中引起败血症的garvieae乳球菌菌株的首次描述和特征。
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2025-11-27 DOI: 10.1111/jfd.70089
Belén Fouz, Evelyn Carballeda-Carrasco, Javier Barriga-Cuartero, Yolanda Torres-Corral, Álvaro Robles, Carlos Zarza, Ysabel Santos

This study presents the first description and characterisation of Lactococcus garvieae isolated from diseased European sea bass (Dicentrarchus labrax) farmed in Spain. During autumn 2023, two fish farms were affected by infectious outbreaks causing moderate cumulative fish mortality (5%-10%). Diseased fish showed clinical signs of haemorrhagic septicaemia, compatible with lactococcosis. Standardised screening tests revealed the presence of Gram-positive cocci in the kidney, spleen and brain of the diseased fish, and negative results for parasites and viruses. Bacterial cultures recovered from the internal organs of all diseased fish were identified as Lactococcus garvieae by phenotypic, genetic, immunological and proteomic analyses. Strains were sensitive to oxytetracycline, florfenicol and erythromycin and resistant to trimethoprim sulfamethoxazole. In addition, representative isolates were virulent to juvenile sea bass and Senegalese sole (Solea senegalensis) after intracoelomic challenge with doses ranging from 106 to 107 CFU/fish. SDS-PAGE and immunoblotting analyses, using rabbit serum anti L. garvieae CECT 5274 and serum from trout immunised with a bivalent oil-based vaccine against L. garvieae-Yersinia ruckeri, showed that the current strains of sea bass shared some antigenic proteins with strains of L. garvieae from other hosts and with the reference strain of L. petauri DSM104842. Our overall results confirm the presence of this emerging pathogen in Spanish marine aquaculture and suggest that commercially available lactococcosis vaccines could confer some protection to sea bass, helping to prevent this new threat.

本研究首次描述和鉴定了从西班牙养殖的患病欧洲鲈鱼(Dicentrarchus labrax)中分离的garvieae乳球菌。2023年秋季,两个养鱼场受到传染病暴发的影响,造成中度累计鱼类死亡率(5%-10%)。患病鱼表现出出血性败血症的临床症状,与乳球菌病相符。标准化筛选试验显示,病鱼的肾脏、脾脏和大脑中存在革兰氏阳性球菌,而寄生虫和病毒的检测结果为阴性。经表型、遗传、免疫学和蛋白质组学分析,所有病鱼内脏细菌培养物均鉴定为garvieae乳球菌。菌株对土霉素、氟苯尼考和红霉素敏感,对甲氧苄啶、磺胺甲恶唑耐药。此外,有代表性的分离菌株对幼鲈鱼和塞内加尔鳎(Solea senegalensis)在腹腔内以106 ~ 107 CFU/鱼的剂量攻毒后具有毒性。利用兔血清抗猫乳杆菌CECT 5274和经二价油基疫苗免疫的鳟鱼血清进行SDS-PAGE和免疫印迹分析,结果表明,目前的海鲈鱼菌株与来自其他宿主的猫乳杆菌菌株和参考菌株ptauri L. DSM104842共有一些抗原蛋白。我们的总体结果证实了这种新兴病原体在西班牙海洋水产养殖中的存在,并表明市售乳球菌病疫苗可以给黑鲈提供一些保护,帮助预防这种新的威胁。
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引用次数: 0
Risk of Spread of Megalocytivirus pagrus1 (Infectious Spleen and Kidney Necrosis Virus) From Frozen Fillets. 冷冻鱼片传播大细胞病毒pagrus1(传染性脾肾坏死病毒)的风险
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2025-11-21 DOI: 10.1111/jfd.70086
Joy A Becker, Paul M Hick, Dorothea Megarani, Hannah Siler, Felipe Pierezan, Shannon N Gray, Kuttichantran Subramaniam

Infectious spleen and kidney necrosis virus (ISKNV) is a significant threat to global aquatic food security by causing large-scale mortality in the aquaculture of tilapia (Oreochromis niloticus) and mandarin fish (Siniperca chuatsi). ISKNV is a genogroup of Megalocytivirus pagrus1, along with RSIV and TRBIV, and their recent listing as WOAH-notifiable diseases highlights the need to assess spread pathways to prevent exotic pathogen incursions. An albino rainbow shark (Epalzeorhynchos frenatum) challenge model was used to evaluate the risk of ISKNV introduction from the trade in frozen seafood products by determining viability after freezing and the median infectious dose (ID50). Six donor fish were injected with ISKNV with tissues collected after clinical signs appeared and used immediately or stored at -20°C for 7 days. Challenge inocula were prepared consisting of snout, eyes, and brain (Pool A; representative of head-on eviscerated fish products), caudal skin and muscle (Pool B; representative of skin-on fillet only products) or peritoneal viscera (Pool C; positive control group). Fish were challenged by bath immersion or intraperitoneal injection and sampled for ISKNV detection by qPCR at morbidity/death, or on Day 14. Negative control fish all survived without detection of ISKNV. All tissue pools including 'skin-on fillet only' caused infection and disease via IP injection or immersion, whether used fresh or frozen, showing ISKNV remains infectious after 7 days at -20°C. The model estimated an ID50 of 42 ISKNV genome equivalents (95% CI: 19-98). This study is the first to investigate the potential for ISKNV spread via frozen fish products, a commodity frequently traded in international markets. The findings provide evidence to inform import risk assessments and highlight the need for further investigation into spread pathways involving uncooked, frozen fish products.

传染性脾肾坏死病毒(ISKNV)引起罗非鱼(Oreochromis niloticus)和鳜鱼(sininiperca chuatsi)的大规模死亡,是对全球水产粮食安全的重大威胁。ISKNV是大细胞病毒pagrus1的一个基因群,与RSIV和TRBIV一起,它们最近被列为世界卫生组织(woah)应通报的疾病,这突显了评估传播途径以防止外来病原体入侵的必要性。采用白化彩虹鲨(ealzeorhynchos frenatum)攻击模型,通过确定冷冻后的生存能力和中位感染剂量(ID50),评估冷冻海产品贸易中引入ISKNV的风险。6条供鱼在出现临床症状后采集组织注射ISKNV,立即使用或-20°C保存7天。制备挑战疫苗,包括口部、眼睛和大脑(A组,代表正面去骨的鱼制品)、尾鳍皮肤和肌肉(B组,代表带皮的鱼片制品)或腹膜脏器(C组,阳性对照组)。在发病/死亡时或第14天,通过浴液浸泡或腹腔注射刺激鱼,并取样进行qPCR检测ISKNV。阴性对照鱼全部存活,未检出ISKNV。所有组织池,包括“仅带皮鱼片”,无论是新鲜的还是冷冻的,都通过IP注射或浸泡引起感染和疾病,表明在-20°C下7天后ISKNV仍具有传染性。该模型估计了42个ISKNV基因组当量的ID50 (95% CI: 19-98)。这项研究首次调查了ISKNV通过冷冻鱼产品传播的可能性,冷冻鱼产品是国际市场上经常交易的商品。这些发现为进口风险评估提供了证据,并强调需要进一步调查涉及未煮熟的冷冻鱼产品的传播途径。
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引用次数: 0
Genomic and Phenotypic Characterisation of Streptococcus parauberis Isolated From Starry Flounder (Platichthys stellatus): First Whole-Genome Analysis, Pathogenicity Assessment, and Antimicrobial Resistance Profiling. 从星牙鲆(Platichthys stellatus)中分离的副金黄色链球菌的基因组和表型特征:首次全基因组分析、致病性评估和抗菌素耐药性分析。
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2025-11-19 DOI: 10.1111/jfd.70083
Ji-Hwan Park, Jeong-Won Byun, Si-Ah Kim, Seong-Won Jang, Si-Woo Kim, Jong-Oh Kim

Streptococcus parauberis is recognised as a major pathogen in marine aquaculture species. This pathogen has been reported in Platichthys stellatus aquaculture farms in South Korea. To investigate the causative agent responsible for mass mortality, monthly disease monitoring was conducted at three aquaculture farms in Pohang. A total of 31 S. parauberis isolates were identified using Spa primers. Additionally, to confirm the pathogenicity of S. parauberis , starry flounder were intraperitoneally injected with strain AD112410, which resulted in a dose-dependent mortality pattern. Whole genome sequencing was conducted on strain AD112410 isolated from starry flounder and compared with that of other S. parauberis strains isolated from olive flounder. All S. parauberis isolates were classified as serotype Ia and exhibited γ-hemolysis. PCR detection revealed the presence of the tet(S) resistance gene in all farms, while erm(B) was absent only in farm C. Virulence genes (gapC and hasC) were found in all farms. All isolates showed resistance to tetracycline and oxytetracycline, while susceptibility to erythromycin and clindamycin depending on the presence of erm(B). These findings not only demonstrate an association between S. parauberis and mass mortality in starry flounder, but also indicate a correlation among serotype, antibiotic resistance genes, and antibiotic susceptibility.

副金黄色链球菌被认为是海洋水产养殖物种中的主要病原体。该病原体已在韩国的星鲽养殖场报道。为了调查造成大规模死亡的病原体,在浦项的三个水产养殖场进行了每月疾病监测。利用Spa引物共鉴定出31株副auberis菌株。此外,为了证实副auberis的致病性,我们腹腔注射了菌株AD112410,结果显示了剂量依赖性的死亡模式。对星形比目鱼分离株AD112410进行全基因组测序,并与橄榄比目鱼分离株进行比较。所有副金黄色葡萄球菌分离株均为血清型Ia,表现为γ-溶血。PCR检测结果显示,所有养殖场均检测到tet(S)抗性基因,而只有c养殖场未检测到erm(B)毒力基因(gapC和hasC)。所有分离株均对四环素和土霉素耐药,而对红霉素和克林霉素的敏感性取决于erm(B)的存在。这些发现不仅证明了副葡萄球菌与星形比目鱼大量死亡之间的相关性,而且还表明了血清型、抗生素耐药基因和抗生素敏感性之间的相关性。
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引用次数: 0
Development of a TaqMan Probe-Based Quantitative PCR Assay Targeting the N Gene for Detection of Carpione rhabdovirus 2023. Carpione横纹肌病毒2023 N基因TaqMan探针定量PCR检测方法的建立
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2025-11-19 DOI: 10.1111/jfd.70072
Zhiyuan Huang, Heng Sun, Dandan Wu, Haoyu Wang, Bingxin Liao, Xiaofeng Chen, Shuanghu Cai, Yucong Huang

The Carpione rhabdovirus strain 2023 (CAPRV2023) is an emerging viral pathogen that has caused significant morbidity and mortality in cultured golden pompano (Trachinotus ovatus) in China over recent years. There is an urgent need for a rapid and accurate method for the quantitative detection of CAPRV2023. In this study, we developed a TaqMan probe-based quantitative PCR assay targeting the N gene of CAPRV2023 and systematically evaluated its specificity, sensitivity, repeatability, and reproducibility of the assay. Both plasmid DNA, in vitro-transcribed RNA standards, and in vitro-transcribed RNA mixed with RNA extracted from CAPRV2023-negative golden pompano tissues were used as templates to evaluate assay performance under both optimal and biologically relevant conditions. Using plasmid DNA standards, the assay exhibited excellent linearity over a broad range of 2 × 101 to 5 × 109 copies/μL, with a standard curve of Y = -3.3132X + 39.142, a correlation coefficient of R2 = 0.9993, an amplification efficiency of 100.37%, and a detection limit of 20 copies per reaction. In vitro-transcribed RNA standards demonstrated robust linearity over the range of 2 × 102 to 2 × 109 copies/μL, with a standard curve of Y = -3.2327X + 45.502, a correlation coefficient of R2 = 0.9968, and a detection limit of 200 copies per reaction. Notably, when the in vitro-transcribed RNA standards were combined with RNA extracted from CAPRV2023-negative golden pompano tissues, the assay maintained similar performance, yielding a standard curve of Y = -3.2182X + 45.445, a correlation coefficient of R2 = 0.9967, and the same detection limit of 200 copies per reaction. These results indicate that the presence of background tissue RNA does not significantly interfere with assay accuracy or sensitivity. Specificity test revealed that the assay exhibits no cross-reactivity with common bacterial or viral agents present in various aquatic organisms. The assay demonstrated high reproducibility and repeatability, with intra-assay and inter-assay coefficients of variation (CVs) below 2.5%. Field sample detection yielded a significantly higher detection rate compared to the conventional PCR assay. The newly developed TaqMan qPCR assay provides a robust diagnostic tool for the efficient and accurate quantitative detection of CAPRV2023 in field samples and surveillance programs.

Carpione rhabdovirus株2023 (capv2023)是近年来在中国养殖的金鲳鱼(Trachinotus ovatus)中引起显著发病率和死亡率的一种新兴病毒病原体。目前迫切需要一种快速、准确的capv2023定量检测方法。在本研究中,我们建立了一种基于TaqMan探针的针对CAPRV2023 N基因的定量PCR检测方法,并对其特异性、敏感性、重复性和再现性进行了系统评价。质粒DNA、体外转录RNA标准品、体外转录RNA与capv2023阴性金鲳鱼组织提取的RNA混合作为模板,在最佳条件和生物学相关条件下评估检测性能。以质粒DNA为标准,在2 × 101 ~ 5 × 109 copies/μL范围内具有良好的线性关系,标准曲线为Y = -3.3132 2x + 39.142,相关系数R2 = 0.9993,扩增效率为100.37%,每次反应检出限为20 copies。体外转录RNA标准品在2 × 102 ~ 2 × 109 copies/μL范围内呈良好的线性关系,标准曲线为Y = -3.2327X + 45.502,相关系数R2 = 0.9968,检测限为200 copies/μL。值得注意的是,当体外转录的RNA标准物与capv2023阴性金鲳组织中提取的RNA结合使用时,检测结果保持相似,标准曲线为Y = -3.2182 2x + 45.445,相关系数R2 = 0.9967,检测限为200拷贝/反应。这些结果表明,背景组织RNA的存在不会显著干扰测定的准确性或敏感性。特异性试验表明,该方法与各种水生生物中常见的细菌或病毒制剂无交叉反应性。该方法重现性和重复性高,测定内和测定间变异系数(CVs)均小于2.5%。与传统的PCR相比,现场样品检测产生了显着更高的检出率。新开发的TaqMan qPCR检测方法为现场样品和监测项目中有效、准确地定量检测capv2023提供了一种强大的诊断工具。
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Journal of fish diseases
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