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Constituents From Brazilian Propolis Against Edwardsiella ictaluri and Flavobacterium covae, Two Bacteria Affecting Channel Catfish (Ictalurus punctatus). 巴西蜂胶中抗Edwardsiella ictaluri和Flavobacterium covae这两种影响海峡鲶鱼(Ictalurus punctatus)的细菌的成分。
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2024-10-10 DOI: 10.1111/jfd.14030
Victor P Ribeiro, Jairo K Bastos, Marcuslene D Harries, Phaedra N Page, Natascha Techen, Kumudini M Meepagala

Edwardsiella ictaluri and Flavobacterium covae are two bacteria species that cause diseases in farm-raised channel catfish (Ictalurus punctatus) that cause heavy economic damage to the aquaculture industry, particularly to the channel catfish farming. In search for environmentally benign antibacterial compounds active against E. ictaluri and F. covae, we investigated the constituents isolated from Brazilian red, brown and green propolis. We have also synthetically modified active constituents to see if lipophilicity plays a role in enhancing antibacterial activities. Vestitol, neovestitol and methylvestitol were found to be the active constituents with minimum inhibitory concentration (MIC) relative to drug control florfenicol (RDCF) values (MIC-RDCF) of 7.6, 7.6 and 7.9 mg/L, respectively, against F. covae. The activity against E. ictaluri was not significant.

爱德华氏菌(Edwardsiella ictaluri)和黄杆菌(Flavobacterium covae)是导致养殖的斑点叉尾鮰(Ictalurus punctatus)发病的两种细菌,它们对水产养殖业,尤其是斑点叉尾鮰养殖业造成了严重的经济损失。为了寻找对 E. ictaluri 和 F. covae 有效的无害环境抗菌化合物,我们研究了从巴西红色、棕色和绿色蜂胶中分离出来的成分。我们还对活性成分进行了合成修饰,以确定亲脂性是否在增强抗菌活性方面发挥作用。研究发现,雌甾醇、新雌甾醇和甲基雌甾醇是蜂胶中的活性成分,它们对苍耳子的最小抑菌浓度(MIC)相对于药物对照氟苯尼考(RDCF)的值(MIC-RDCF)分别为 7.6、7.6 和 7.9 毫克/升。对 E. ictaluri 的活性不显著。
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引用次数: 0
The Impact of Exposure Dosage and Host Genetics on the Shedding Kinetics of Flavobacterium psychrophilum in Rainbow Trout. 暴露剂量和宿主遗传学对虹鳟鱼精神黄杆菌脱落动力学的影响
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2024-10-09 DOI: 10.1111/jfd.14026
Darbi R Jones, Jeremy Everson, Timothy D Leeds, Gregory D Wiens, Andrew R Wargo

Flavobacterium psychrophilum, the causative agent of bacterial cold water disease (BCWD), is one of the leading pathogens in rainbow trout (Oncorhynchus mykiss) aquaculture. To date, there is little knowledge of the transmission kinetics of F. psychrophilum over the course of infection. In particular, how transmission is affected by host genotype and pathogen exposure dosage are not well studied. In order to fill in these knowledge gaps, we exposed two divergently selected lines of rainbow trout (ARS-Fp-R and ARS-Fp-S) to a range of dosages of F. psychrophilum (strain CSF117-10). We then measured mortality and bacterial shedding to estimate transmission risk at multiple time points since initial infection. As dosage increased, the number of fish shedding and the amount of bacteria shed increased ranging from 0% to 100% and 103 to 108 cells fish-1 h-1, respectively. In addition, we found that disease resistance (survival) was not correlated with transmission risk blocking, in that 67% of fish which shed bacteria experienced no clinical disease. In general, fish mortality began on Day 3, peaked between Days 5-7 and was higher in the ARS-Fp-R line. Results from this study could be used to develop epidemiological models and improve disease management, particularly in the context of aquaculture and selective breeding.

精神黄杆菌(Flavobacterium psychrophilum)是细菌性冷水病(BCWD)的病原体,也是虹鳟(Oncorhynchus mykiss)水产养殖中的主要病原体之一。迄今为止,人们对 F. psychrophilum 在感染过程中的传播动力学知之甚少。尤其是对宿主基因型和病原体暴露剂量如何影响传播还没有进行深入研究。为了填补这些知识空白,我们将两个不同选育品系的虹鳟鱼(ARS-Fp-R 和 ARS-Fp-S)暴露于不同剂量的嗜心理嗜血杆菌(菌株 CSF117-10)中。然后,我们测量了死亡率和细菌脱落情况,以估计自初次感染以来多个时间点的传播风险。随着剂量的增加,脱落鱼的数量和细菌脱落量分别从 0% 到 100% 和 103 到 108 cells fish-1 h-1 不等。此外,我们还发现,抗病性(存活率)与传播风险阻断无关,因为有 67% 的脱落细菌鱼没有出现临床疾病。一般来说,鱼的死亡率从第 3 天开始,在第 5-7 天达到高峰,ARS-Fp-R 品系的死亡率更高。这项研究的结果可用于开发流行病学模型和改善疾病管理,特别是在水产养殖和选择性繁殖方面。
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引用次数: 0
Classification of Kudoa thyrsites infected and uninfected fish using a handheld near-infrared spectrophotometer, SIMCA and PLS-DA. 使用手持式近红外分光光度计、SIMCA 和 PLS-DA 对受 Kudoa thyrsites 感染和未感染的鱼类进行分类。
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2024-10-06 DOI: 10.1111/jfd.14025
S Henning

Kudoa thyrsites infection of marine fish typically results in myoliquefaction, which is only apparent 24 to 56 h post-mortem. The traditional methods for the detection of K. thyrsites infected fish are time-consuming and destructive, reducing its marketability. This poses a challenge for the fish industry to remove infected fish before it reaches the market or further processing activities. This study investigated the use of near-infrared (NIR) spectroscopy, in combination with soft independent modelling of class analogy (SIMCA) and partial least square discriminant analysis (PLS-DA), for discriminating K. thyrsites infected fish from uninfected fish. Performance of the classification models was evaluated by calculating the sensitivity, specificity and precision. A total of 334 fish samples (200 sardine, 64 hake and 70 kingklip) were used for this study. Infection of K. thyrsites was determined with the use of qPCR assays. Ninety per cent (90%) of the sardine samples, 78% of the hake samples and 37% of the kingklip samples were infected. Class groups of infected and uninfected fish samples were created for the purpose of generating SIMCA and PLS-DA classification models for each species of fish, as well as for a species independent data set. Principal component analysis (PCA) of NIR spectra did not show any clustering for infected and uninfected samples. Calibration and test sample sets were generated for the purpose of building and testing the SIMCA and PLD-DA classification models. SIMCA and PLS-DA were unable to classify test samples correctly into the two classes. The number of misclassifications (NMC) was higher for the SIMCA models than for the PLS-DA models, with more than 60% incorrectly classified. SIMCA classified most of the test samples into both classes. The precision for PLS-DA were 89% for sardine, 81% for hake, 0% for kingklip and 87% for species independent models, however, most samples were classified at infected. The use of NIR spectroscopy and classification models such as SIMCA and PLS-DA showed limited use as a method to distinguish between K. thyrsites infected and uninfected fish samples. Textural and chemical changes during extended frozen storage of the fish samples may have masked the effects associated with K. thyrsites infection. Further studies are suggested where NIR spectroscopy is used in combination with texture analysis and image spectroscopy.

海鱼感染 Kudoa thyrsites 通常会导致肌软化,只有在死后 24 至 56 小时才会显现。检测受 K. thyrsites 感染的鱼类的传统方法既费时又具有破坏性,降低了鱼类的销售能力。这就给渔业带来了挑战,如何在受感染的鱼进入市场或进一步加工活动之前将其移除。本研究调查了近红外光谱与类类比软独立建模(SIMCA)和偏最小二乘法判别分析(PLS-DA)的结合使用情况,以判别感染 K. thyrsites 的鱼和未感染的鱼。通过计算灵敏度、特异性和精确度来评估分类模型的性能。本研究共使用了 334 份鱼类样本(200 份沙丁鱼样本、64 份无须鳕样本和 70 份鳞鳕样本)。使用 qPCR 检测法确定是否感染了 K. thyrsites。90%的沙丁鱼样本、78%的无须鳕样本和 37% 的帝王鲷样本受到感染。为生成 SIMCA 和 PLS-DA 分类模型,我们创建了感染和未感染鱼类样本的类组,用于每种鱼类以及独立于物种的数据集。近红外光谱的主成分分析(PCA)未显示出受感染和未感染样本的任何聚类。为建立和测试 SIMCA 和 PLD-DA 分类模型,生成了校准和测试样本集。SIMCA 和 PLS-DA 无法将测试样本正确划分为两个类别。SIMCA 模型的误分类次数(NMC)高于 PLS-DA 模型,误分类次数超过 60%。SIMCA 将大多数测试样本归入了两个类别。PLS-DA 模型对沙丁鱼的精确度为 89%,对无须鳕的精确度为 81%,对帝王鲽的精确度为 0%,对物种独立模型的精确度为 87%,然而,大多数样本都是在感染时被分类的。使用近红外光谱和分类模型(如 SIMCA 和 PLS-DA)来区分感染和未感染的鱼类样本的效果有限。鱼类样本在长时间冷冻储存过程中的纹理和化学变化可能掩盖了与沙雷氏痢疾杆菌感染相关的影响。建议进一步开展研究,将近红外光谱与纹理分析和图像光谱结合使用。
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引用次数: 0
AI-Driven Realtime Monitoring of Early Indicators for Ichthyophthirius multifiliis Infection of Rainbow Trout. 人工智能驱动的虹鳟鱼多纤嗜鱼螺旋体感染早期指标实时监测。
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2024-09-30 DOI: 10.1111/jfd.14027
Rikke Bonnichsen, Glenn Gunner Brink Nielsen, Jeppe Seidelin Dam, Dorte Schrøder-Petersen, Kurt Buchmann

A novel video-based real-time system based on AI (artificial intelligence) was developed to detect clinical signs in fish exposed to pathogens. We selected a White Spot Disease model involving rainbow trout as the experimental animal and the parasitic ciliate Ichthyophthirius multifiliis as a pathogen. We compared two identical fish tank systems: one tank was infected by co-habitation, whereas the other tank was kept non-infected (sham infection). The two fish tanks were separately video monitored (full top and side view) during the course of infection, during which fish were removed whenever they developed clinical signs (direct visual inspection by the observer). Image analysis (object detection, classification and tracking) was used to track behavioural changes in fish (in every recorded video frame), focusing on movement patterns and spatial localisation. Initially, the two fish groups (infected and non-infected) exhibited similar behaviour and non-infected fish did not change behaviour during the 15 d observation period (from 5 d before infection until 10 dpi). At 4, 7, 8, 9 and 10 dpi some infected fish showed clinical signs (equilibrium disturbance, gasping and lethargy) and were removed from the experiment. Anorexia occurred from 5 dpi and a gradual progression of gasping behaviour was noted, whereas the frequency of fish flashing (rubbing/scratching against objects) was low. Equilibrium disturbances and the development of white spots in the skin appeared to be a much later (8-10 dpi at this temperature) indicator of infection. The video analysis showed a general distribution of non-infected fish in all parts of the fish tank during the entire experiment, whereas infected fish already at 4-5 dpi moved towards higher water currents in the top and bottom positions. This change of fish positioning within the tank appeared as a promising early indicator of infection. The study suggests that continuous monitoring of fish behaviour using AI can potentially optimise the timing of humane endpoints, indicate disease signs earlier and thereby improve animal welfare in both animal experimentation and in aquaculture settings.

我们开发了一种基于 AI(人工智能)的新型视频实时系统,用于检测鱼类接触病原体后的临床症状。我们选择了一个白斑病模型,以虹鳟鱼为实验动物,以寄生纤毛虫Ichthyophthirius multifiliis为病原体。我们对两个相同的鱼缸系统进行了比较:一个鱼缸通过共栖感染了病原体,而另一个鱼缸则未感染病原体(假感染)。在感染过程中,分别对两个鱼缸进行视频监控(全俯视图和侧视图),在此期间,只要鱼出现临床症状(观察者直接目测),就将其移走。使用图像分析(物体检测、分类和跟踪)来跟踪鱼的行为变化(在每一帧录制的视频中),重点是运动模式和空间定位。最初,两组鱼(感染和未感染)表现出相似的行为,未感染的鱼在 15 天的观察期间(从感染前 5 天到 10 dpi)没有行为变化。在 4、7、8、9 和 10 dpi,一些受感染的鱼出现了临床症状(平衡失调、喘气和嗜睡),并被移出实验。厌食症从 5 dpi 开始出现,喘气行为逐渐加重,而鱼体闪光(摩擦/抓挠物体)的频率很低。平衡失调和皮肤出现白斑似乎是更晚些时候(在此温度下为 8-10 dpi)才出现的感染指标。视频分析表明,在整个实验过程中,未感染的鱼一般分布在鱼缸的各个部分,而在 4-5 dpi 时就已感染的鱼则向水流较高的顶部和底部位置移动。鱼在鱼缸中位置的这种变化似乎是一个很有希望的早期感染指标。这项研究表明,利用人工智能对鱼的行为进行连续监测,有可能优化人道终点的时间选择,提早显示疾病征兆,从而改善动物实验和水产养殖环境中的动物福利。
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引用次数: 0
Use of cardiac cell cultures from salmonids to measure the cardiotoxic effect of environmental pollutants. 利用鲑鱼心脏细胞培养物测量环境污染物的心脏毒性效应。
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2024-09-29 DOI: 10.1111/jfd.14018
Torben Krebs, Julia Bauer, Sarah Graff, Lukas Teich, Markus Sterneberg, Marina Gebert, Henrike Seibel, Bettina Seeger, Dieter Steinhagen, Verena Jung-Schroers, Mikolaj Adamek

Environmental stressors such as micro- and nanosized plastic particles (MNPs) or crude oil have a detrimental effect on aquatic animals; however, the impact upon the cardiovascular system of fish remains relatively under-researched. This study presents a novel approach for investigating the effect of crude oil and MNPs on the cardiac system of fish. We used salmonid larvae and cardiac cell cultures derived from hearts of salmonid fish and exposed them to environmental stressors. Following exposure to plastic particles or crude oil, the larvae exhibited some variation in contraction rate. In contrast, significant alterations in the contraction rate were observed in all cardiac cell cultures. The greatest differences between the control and treatment groups were observed in cardiac cell cultures derived from older brown trout. Following 7 days of exposure to MNPs or crude oil in Atlantic salmon larval hearts or cardiac cell cultures, there were only minor responses noted in mRNA expression of the selected marker genes. These findings show the use of a novel in vitro technique contributing to the existing body of knowledge on the impact of MNPs and crude oil on the cardiovascular system of salmonids and the associated risk.

微小和纳米塑料颗粒(MNPs)或原油等环境应激源会对水生动物产生有害影响,但对鱼类心血管系统影响的研究相对较少。本研究提出了一种研究原油和 MNPs 对鱼类心脏系统影响的新方法。我们使用鲑鱼幼体和来自鲑鱼心脏的心脏细胞培养物,并将它们暴露于环境应激源。暴露于塑料微粒或原油后,幼鱼的收缩率出现了一些变化。相反,在所有心脏细胞培养物中都观察到了收缩率的显著变化。对照组和处理组之间的最大差异出现在来自年长褐鳟鱼的心脏细胞培养物中。大西洋鲑幼鱼心脏或心脏细胞培养物接触 MNPs 或原油 7 天后,所选标记基因的 mRNA 表达仅出现轻微反应。这些研究结果表明,新型体外技术的使用有助于丰富关于 MNPs 和原油对鲑鱼心血管系统的影响及相关风险的现有知识。
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引用次数: 0
Mucosal epithelial homeostasis: Reference intervals for skin, gill lamellae and filament for Atlantic salmon and other fish species. 粘膜上皮细胞稳态:大西洋鲑鱼和其他鱼类的皮肤、鳃片和鱼丝的参考区间。
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2024-09-24 DOI: 10.1111/jfd.14023
Grigory V Merkin, Albert Girons, Mearge A Okubamichael, Karin Pittman

Mucosal barriers are gatekeepers of health and exhibit homeostatic variation in relation to habitat and disease. Mucosal Mapping technology provides an in-depth examination of the dynamic mucous cells (MCs) in fish mucosal barriers on tangential sections, about 90° from the view of traditional histology. The method was originally developed and standardized in academia prior to the establishment of QuantiDoc AS to apply mucosal mapping, now trademarked as Veribarr™ for the analysis of skin, gills and gastrointestinal tracts. Veribarr™ uses design-based stereology for the selection and measurement of cell area (size) (μm2), the volumetric density of MCs in the epithelium (MCD, amount of the epithelia occupied by MCs, in %) and the calculated abundance of the MCs (barrier status or defence activity). MC production was mapped across the skin and gill epithelia in 12 species, discovering that gills consistently have two distinct groups of MCs, one on the lamellae where MCs are few and small and one on the filament where MCs are larger and more abundant. MCs were usually much larger in the skin than in the gills, with the latter requiring fewer and smaller cells for adequate respiration. The difference observed between MCs in gill lamella and gill filament is likely a result of functional demands. In addition, our findings also highlight a variation in the mucosal parameters between the species skin, which cannot be explained by the weight differences, and a potential link between MC distribution and species-specific lifestyles in the gill lamella. This diversity necessitates the development of species and tissue site-specific reference intervals for mucosal health evaluation. Mucosal bivariate reference intervals were developed for MC production, including size (trophy) and calculated defence activity (plasia) in the skin and gills of Atlantic salmon, to contrast new measurements against historical data patterns. The application of mucosal reference intervals demonstrates that stress from parasites and treatments can manifest as changes in mucosal architecture, as evidenced by MC hypertrophy and hyperplasia within the gill lamellae. These reference intervals also facilitate comparisons with wild Atlantic salmon, revealing a somewhat higher MC level in farmed salmon gill lamellae. These findings suggest that MC hyperplasia and hypertrophy in the gills are stress/environmental responses in aquaculture. They also advocate for developing specific mucosal bivariate homeostatic reference intervals in aquaculture to improve fish health and welfare across all farmed species.

粘膜屏障是鱼类健康的守护者,会因栖息地和疾病的不同而发生同态变化。粘膜映射技术可在切线切片上深入检查鱼类粘膜屏障中的动态粘液细胞(MC),与传统组织学的视角约成 90°。在 QuantiDoc AS 成立之前,该方法最初是在学术界开发并标准化的,用于皮肤、鳃和胃肠道分析的粘膜映射技术现已注册为 Veribarr™。Veribarr™ 采用基于设计的立体学方法来选择和测量细胞面积(大小)(μm2)、上皮细胞中 MC 的体积密度(MCD,MC 占上皮细胞的百分比)以及计算出的 MC 丰度(屏障状态或防御活动)。我们对 12 个物种的皮肤和鳃上皮细胞的 MC 产量进行了绘制,发现鳃上始终有两组不同的 MC,一组位于薄片上,MC 数量少且小,另一组位于丝状上,MC 数量多且大。皮肤上的 MC 通常比鳃上的大得多,后者需要更少、更小的细胞来进行充分的呼吸。在鳃片和鳃丝中观察到的 MCs 之间的差异可能是功能需求的结果。此外,我们的研究结果还突显了不同物种皮肤粘膜参数的差异(这不能用体重差异来解释),以及 MC 的分布与鳃盖中物种特有的生活方式之间的潜在联系。这种多样性要求为粘膜健康评估制定特定物种和组织部位的参考区间。为大西洋鲑鱼皮肤和鳃中的 MC 产量(包括体型(trophy)和计算出的防御活动(plasia))制定了粘膜双变量参考区间,以便将新的测量结果与历史数据模式进行对比。粘膜参考区间的应用表明,寄生虫和治疗造成的压力可表现为粘膜结构的变化,鳃层内的MC肥大和增生就是证明。这些参考区间还有助于与野生大西洋鲑进行比较,显示养殖鲑鱼鳃片的 MC 水平略高。这些发现表明,鳃中 MC 的增生和肥大是水产养殖中的应激/环境反应。他们还主张在水产养殖中开发特定的粘膜双变量同态参考区间,以改善所有养殖物种的鱼类健康和福利。
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引用次数: 0
Temperature-dependent alterations in the proteome of the emergent fish pathogen Edwardsiella piscicida. 新出现的鱼类病原体 Edwardsiella piscicida 蛋白质体随温度的变化。
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2024-09-20 DOI: 10.1111/jfd.14017
Kim L Jacobsen, Matt Griffin, Brett S Phinney, Michelle Salemi, Zeinab Yazdi, Sujita Balami, Caitlin E Older, Esteban Soto

Edwardsiella piscicida is an emerging bacterial pathogen and the aetiological agent of edwardsiellosis among cultured and wild fish species globally. The increased frequency of outbreaks of this Gram-negative, facultative intracellular pathogen pose not only a threat to the aquaculture industry but also a possible foodborne/waterborne public health risk due to the ill-defined zoonotic potential. Thus, understanding the role of temperature on the virulence of this emerging pathogen is essential for comprehending the pathogenesis of piscine edwardsiellosis in the context of current warming trends associated with climate change, as well as providing insight into its zoonotic potential. In this study, significant temperature-dependent alterations in bacterial growth patterns were observed, with bacterial isolates grown at 17°C displaying higher peak growth sizes, extended lag times, and slower maximal growth rates than isolates grown at 27or 37°C. When E. piscicida isolates were grown at 37°C compared to 27 and 17°C, mass spectrometry analysis of the E. piscicida proteome revealed significant downregulation of crucial virulence proteins, such as Type VI secretion system proteins and flagellar proteins. Although in vivo models of infection are warranted, this in vitro data suggests possible temperature-associated alterations in the virulence and pathogenic potential of E. piscicida in poikilotherms and homeotherms.

鱼类爱德华氏菌(Edwardsiella piscicida)是一种新出现的细菌病原体,也是全球养殖鱼类和野生鱼类爱德华氏菌病的病原体。这种革兰氏阴性、兼性细胞内病原体的爆发频率越来越高,不仅对水产养殖业构成威胁,而且由于其人畜共患病的可能性尚不明确,还可能带来食源性/水传播的公共卫生风险。因此,了解温度对这一新兴病原体毒力的作用,对于在当前与气候变化相关的气候变暖趋势下理解鱼类爱德华氏菌病的致病机理以及深入了解其人畜共患病的可能性至关重要。在这项研究中,观察到细菌的生长模式发生了明显的温度依赖性变化,与在 27 或 37 摄氏度条件下生长的细菌相比,在 17 摄氏度条件下生长的细菌分离物显示出更高的生长峰值、更长的滞后时间和更慢的最大生长速率。与 27 和 17 摄氏度相比,在 37 摄氏度下生长的鱼腥鸥分离物的鱼腥鸥蛋白质组的质谱分析表明,关键的毒力蛋白(如 VI 型分泌系统蛋白和鞭毛蛋白)显著下调。虽然还需要建立体内感染模型,但这些体外数据表明,鱼腥藻的毒力和致病潜力可能会随着温度的变化而改变。
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引用次数: 0
Utilization of publicly available data to summarize spatio‐temporal patterns of fish health events of Atlantic salmon (Salmo salar) reported by marine finfish industries in British Columbia (BC), Canada 利用公开数据总结加拿大不列颠哥伦比亚省(BC)海洋鱼类产业报告的大西洋鲑鱼(Salmo salar)鱼类健康事件的时空模式
IF 2.5 3区 农林科学 Q2 FISHERIES Pub Date : 2024-09-18 DOI: 10.1111/jfd.14022
Sumit Jyoti, Beibei Jia, Sonja Saksida, Henrik Stryhn, Derek Price, Krishna Kumar Thakur
Atlantic salmon aquaculture companies in British Columbia (BC) must report fish health events to Fisheries and Oceans Canada (DFO) as part of their licensing conditions. Our study aimed to summarize these fish health events reported by Atlantic salmon sites in BC to identify spatial and spatio‐temporal clusters. We conducted descriptive, retrospective global, and local cluster analyses using Moran's I and scan statistics. Between 2016 and 2022, 265 fish health events were reported. The annual incidence ranged from 5.60 (95% CI: 3.90–7.80) to 6.86 (95% CI: 4.70–9.60) health events per 100 active site‐months. The most common events were yellow mouth (60.75%; 161/265) and salmonid rickettsial septicaemia (SRS) (15.47%; 41/265). The Moran's I index was positive and significant for yellow mouth, SRS, and overall fish health events at different distance bands. Most of the spatial and spatio‐temporal clusters were identified in the west‐central and southwestern parts of Vancouver Island. Our study hypothesizes that management practices, environmental conditions, and water quality parameters may have influenced the increased reporting of fish health events in these regions. Overall, the study highlights the potential of publicly available data for practical risk mapping in understanding the patterns of farmed Atlantic salmon diseases in BC.
作为许可条件的一部分,不列颠哥伦比亚省(BC)的大西洋鲑水产养殖公司必须向加拿大渔业及海洋部(DFO)报告鱼类健康事件。我们的研究旨在总结不列颠哥伦比亚省大西洋鲑养殖场报告的这些鱼类健康事件,以确定空间和时空集群。我们使用莫兰 I 统计法和扫描统计法进行了描述性、回顾性全球和局部聚类分析。2016 年至 2022 年期间,共报告了 265 起鱼类健康事件。每年每 100 个活动地点月发生 5.60(95% CI:3.90-7.80)至 6.86(95% CI:4.70-9.60)起健康事件。最常见的事件是黄口病(60.75%;161/265)和鲑鱼立克次体败血症(SRS)(15.47%;41/265)。不同距离带的黄口病、SRS 和总体鱼类健康事件的 Moran's I 指数为正且显著。在温哥华岛的中西部和西南部发现了大多数空间和时空集群。我们的研究假设,管理方法、环境条件和水质参数可能影响了这些地区鱼类健康事件报告的增加。总之,这项研究强调了公开数据在绘制实用风险图以了解不列颠哥伦比亚省养殖大西洋鲑疾病模式方面的潜力。
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引用次数: 0
A droplet digital PCR assay to detect Chinese rice-field eels rhabdovirus. 检测中国稻田黄鳝横纹肌病毒的液滴数字 PCR 法。
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2024-09-16 DOI: 10.1111/jfd.14020
Wenzhi Liu, Yong Zhou, Nan Jiang, Chen Xu, Qiwang Zhong, Yuding Fan

Chinese rice-field eels rhabdovirus (CrERV) causes haemorrhagic disease in Chinese rice-field eels (Monopterus albus), leading to significant mortality and economic losses. Sensitive detection of CrERV nucleic acids is essential to control the spread of this pathogen and to treat infected individuals. Herein, we developed an efficient and sensitive droplet digital PCR (ddPCR) method to rapidly detect and quantify CrERV. The ddPCR assay optimal conditions were an annealing temperature of 53°C, and primer and probe concentrations of 0.5 and 0.25 μM, respectively. The assay had a diagnostic sensitivity of 0.23 copies/μL, and was highly specific, showing no cross reactivity with other viruses (infectious haematopoietic necrosis virus, grass carp reovirus, spring viremia of carp virus, largemouth bass ranavirus, carp edema virus, Chinese giant salamander iridovirus, and white spot syndrome virus). Real-time quantitative PCR testing of 30 Chinese rice-field eels samples detected CrERV in 7 samples (23.3%), whereas ddPCR detected CrERV in 12 samples (40%), demonstrating its higher sensitivity. Thus, ddPCR represents an advanced method to absolutely quantify CrERV in infected fish with low virus concentrations, providing a valuable tool to manage the spread and impact of CrERV.

中国稻田黄鳝横纹肌病毒(CrERV)会导致中国稻田黄鳝(Monopterus albus)出血性疾病,造成大量死亡和经济损失。对 CrERV 核酸的灵敏检测对于控制该病原体的传播和治疗感染者至关重要。在此,我们开发了一种高效、灵敏的液滴数字 PCR(ddPCR)方法来快速检测和量化 CrERV。ddPCR 检测的最佳条件是退火温度为 53°C,引物和探针的浓度分别为 0.5 和 0.25 μM。该检测方法的诊断灵敏度为 0.23 拷贝/μL,特异性高,与其他病毒(传染性造血坏死病毒、草鱼再病毒、鲤鱼春季病毒血症、大口鲈鱼匐行病毒、鲤鱼水肿病毒、中国大鲵虹彩病毒和白斑综合征病毒)无交叉反应。在对 30 份中国稻田黄鳝样本进行实时定量 PCR 检测时,有 7 份样本(23.3%)检测出 CrERV,而 ddPCR 检测有 12 份样本(40%)检测出 CrERV,这表明 ddPCR 的灵敏度更高。因此,ddPCR 是一种先进的方法,可在病毒浓度较低的感染鱼体内绝对量化 CrERV,为控制 CrERV 的传播和影响提供了宝贵的工具。
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引用次数: 0
Spontaneous exophytic tumour in Nothobranchius furzeri, an aging research model. 老化研究模型 Nothobranchius furzeri 的自发性外生肿瘤。
IF 2.2 3区 农林科学 Q2 FISHERIES Pub Date : 2024-09-16 DOI: 10.1111/jfd.14021
Jakub Žák, Ľubomír Pojezdal, Iva Dyková
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引用次数: 0
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Journal of fish diseases
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