Pub Date : 2025-12-01Epub Date: 2025-10-04DOI: 10.1016/j.jmr.2025.107972
Marco Schiavina , David Joseph , Christian Griesinger , Isabella C. Felli , Roberta Pierattelli
Carbon-13 detected Nuclear Magnetic Resonance (NMR) experiments have become a well-established and powerful tool for investigating a wide variety of biomolecular systems, offering unique insights into structure and dynamics. High field NMR spectrometers offer unprecedented resolution, particularly when working at 1.2 GHz, which is crucial in general and particularly important for samples with crowded NMR spectra. However, operating at such high fields introduces new challenges, including the need for efficient spin manipulations across broad frequency ranges while adhering to the power limitations of modern probes. Optimal control (OC) theory offers a powerful framework for designing Radio-Frequency (RF) pulses that achieve desired spin manipulations with high efficiency, even under strict experimental constraints. In this work, we focus on the implementation of OC-designed 15N pulses to enhance the performance of 13C-detected experiments at 1.2 GHz. Specifically, we demonstrate how these pulses improve both excitation bandwidth and signal sensitivity. The approach is validated using a small, well-folded protein and a more challenging intrinsically disordered protein (IDP) dissolved in a high-salt buffer as commonly required for IDPs' stability. Our results show that 15N OC pulses provide clear benefits across sample types and conditions, confirming their utility as a robust solution for bandwidth-limited NMR experiments at the highest available magnetic fields.
{"title":"15N optimal control pulses: an efficient approach to enhance heteronuclear-detected NMR experiments at high magnetic fields","authors":"Marco Schiavina , David Joseph , Christian Griesinger , Isabella C. Felli , Roberta Pierattelli","doi":"10.1016/j.jmr.2025.107972","DOIUrl":"10.1016/j.jmr.2025.107972","url":null,"abstract":"<div><div>Carbon-13 detected Nuclear Magnetic Resonance (NMR) experiments have become a well-established and powerful tool for investigating a wide variety of biomolecular systems, offering unique insights into structure and dynamics. High field NMR spectrometers offer unprecedented resolution, particularly when working at 1.2 GHz, which is crucial in general and particularly important for samples with crowded NMR spectra. However, operating at such high fields introduces new challenges, including the need for efficient spin manipulations across broad frequency ranges while adhering to the power limitations of modern probes. Optimal control (OC) theory offers a powerful framework for designing Radio-Frequency (RF) pulses that achieve desired spin manipulations with high efficiency, even under strict experimental constraints. In this work, we focus on the implementation of OC-designed <sup>15</sup>N pulses to enhance the performance of <sup>13</sup>C-detected experiments at 1.2 GHz. Specifically, we demonstrate how these pulses improve both excitation bandwidth and signal sensitivity. The approach is validated using a small, well-folded protein and a more challenging intrinsically disordered protein (IDP) dissolved in a high-salt buffer as commonly required for IDPs' stability. Our results show that <sup>15</sup>N OC pulses provide clear benefits across sample types and conditions, confirming their utility as a robust solution for bandwidth-limited NMR experiments at the highest available magnetic fields.</div></div>","PeriodicalId":16267,"journal":{"name":"Journal of magnetic resonance","volume":"381 ","pages":"Article 107972"},"PeriodicalIF":1.9,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145260354","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-10-06DOI: 10.1016/j.jmr.2025.107981
George Mitrikas , Rania Giourtsidou
Dynamical decoupling methods like the Carr-Purcell-Meiboom-Gill (CPMG) or XY4- and XY8-based sequences play a key role in the measurement of reliable electron spin coherence times as they help to disentangle different sources of decoherence. Although these methods are mainly evaluated for their robustness and ability to mitigate pulse imperfections, to date little attention has been paid to the selectivity of the microwave pulses (mw), which is a factor that affects the determination of in two ways: first, unwanted stimulated echoes, which decay with , overlap with desired refocused echoes, resulting in overestimated values of . Second, under selective mw excitation, the amplitude of the different refocused echoes shows an additional time decay even in the absence of relaxation processes. Here, we investigate the characteristics of CPMG, XY4 and XY8-based sequences by performing numerical simulations for a two-level spin system. Using the Liouville space representation of the spin state, we introduce relaxation effects in the simulations. We show that our numerical calculations reproduce well all the features of the experimental echoes and allow for the accurate determination of times without the need to perform tedious phase-cycle protocols to eliminate unwanted signals.
{"title":"Measuring reliable electron spin coherence times with dynamical decoupling sequences that use selective mw pulses","authors":"George Mitrikas , Rania Giourtsidou","doi":"10.1016/j.jmr.2025.107981","DOIUrl":"10.1016/j.jmr.2025.107981","url":null,"abstract":"<div><div>Dynamical decoupling methods like the Carr-Purcell-Meiboom-Gill (CPMG) or XY4- and XY8-based sequences play a key role in the measurement of reliable electron spin coherence times as they help to disentangle different sources of decoherence. Although these methods are mainly evaluated for their robustness and ability to mitigate pulse imperfections, to date little attention has been paid to the selectivity of the microwave pulses (mw), which is a factor that affects the determination of <span><math><msub><mrow><mi>T</mi></mrow><mrow><mn>2</mn></mrow></msub></math></span> in two ways: first, unwanted stimulated echoes, which decay with <span><math><msub><mrow><mi>T</mi></mrow><mrow><mn>1</mn></mrow></msub></math></span>, overlap with desired refocused echoes, resulting in overestimated values of <span><math><msub><mrow><mi>T</mi></mrow><mrow><mn>2</mn></mrow></msub></math></span>. Second, under selective mw excitation, the amplitude of the different refocused echoes shows an additional time decay even in the absence of relaxation processes. Here, we investigate the characteristics of CPMG, XY4 and XY8-based sequences by performing numerical simulations for a two-level spin system. Using the Liouville space representation of the spin state, we introduce relaxation effects in the simulations. We show that our numerical calculations reproduce well all the features of the experimental echoes and allow for the accurate determination of <span><math><msub><mrow><mi>T</mi></mrow><mrow><mn>2</mn></mrow></msub></math></span> times without the need to perform tedious phase-cycle protocols to eliminate unwanted signals.</div></div>","PeriodicalId":16267,"journal":{"name":"Journal of magnetic resonance","volume":"381 ","pages":"Article 107981"},"PeriodicalIF":1.9,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145260335","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-10-14DOI: 10.1016/j.jmr.2025.107970
Danil A. Markelov, Alexey S. Kiryutin, Alexandra V. Yurkovskaya
Signal Amplification By Reversible Exchange (SABRE) increases NMR sensitivity using parahydrogen as a source of nuclear spin polarization. In SABRE, the to-be-polarized substrate and dihydrogen in bulk form a transient polarization transfer complex (PTC). This study reports high-field 1H polarization transfer via SABRE induced by selective polychromatic excitation of 1H nuclear spins, avoiding a magnetic field-cycling setup and high-power RF pulses. This enables routine SABRE implementation on standard NMR equipment, including MRI scanners. The proposed polychromatic excitation is efficient for the 1H polarization transfer in the PTCs comprising two weakly coupled hydride 1H nuclei, i.e. with a large chemical shift difference . We show that in a single type of the PTC, coherent high-field 1H polarization transfer is driven by double-RF excitation, i.e. applied at two different frequencies simultaneously. In the general case of several PTCs formed by the substrate molecule, the double-RF excitation allows to selectively induce the 1H polarization transfer in the PTC of interest. To maximize the polarization levels achieved when the substrate forms several types of the PTCs, we propose multi-RF excitation, i.e. applied at more than two 1H frequencies simultaneously, as a generalization of the double-RF approach. The maximum 1H signal enhancements at 9.4 T achieved are as follows: −27 for free nicotinamide (−85 for complex-bound), −21 for free 3-methylpyridine (−105 for complex-bound), −23 for pyridine. Remarkably, for all substrates the 1H signal enhancement exceeds that obtained spontaneously in the high-field: ∼3–9 -fold for the free substrates and ∼10–20-fold for the complex-bound substrates.
{"title":"Polychromatic excitation for 1H SABRE polarization transfer in weakly coupled systems at high field","authors":"Danil A. Markelov, Alexey S. Kiryutin, Alexandra V. Yurkovskaya","doi":"10.1016/j.jmr.2025.107970","DOIUrl":"10.1016/j.jmr.2025.107970","url":null,"abstract":"<div><div>Signal Amplification By Reversible Exchange (SABRE) increases NMR sensitivity using parahydrogen as a source of nuclear spin polarization. In SABRE, the to-be-polarized substrate and dihydrogen in bulk form a transient polarization transfer complex (PTC). This study reports high-field <sup>1</sup>H polarization transfer via SABRE induced by selective polychromatic excitation of <sup>1</sup>H nuclear spins, avoiding a magnetic field-cycling setup and high-power RF pulses. This enables routine SABRE implementation on standard NMR equipment, including MRI scanners. The proposed polychromatic excitation is efficient for the <sup>1</sup>H polarization transfer in the PTCs comprising two weakly coupled hydride <sup>1</sup>H nuclei, i.e. with a large chemical shift difference <span><math><mfrac><mi>γ</mi><mrow><mn>2</mn><mi>π</mi></mrow></mfrac><msub><mi>B</mi><mn>0</mn></msub><mi>Δδ</mi><mo>≫</mo><mfenced><mi>J</mi></mfenced></math></span>. We show that in a single type of the PTC, coherent high-field <sup>1</sup>H polarization transfer is driven by double-RF excitation, i.e. applied at two different frequencies simultaneously. In the general case of several PTCs formed by the substrate molecule, the double-RF excitation allows to selectively induce the <sup>1</sup>H polarization transfer in the PTC of interest. To maximize the polarization levels achieved when the substrate forms several types of the PTCs, we propose multi-RF excitation, i.e. applied at more than two <sup>1</sup>H frequencies simultaneously, as a generalization of the double-RF approach. The maximum <sup>1</sup>H signal enhancements at 9.4 T achieved are as follows: −27 for free nicotinamide (−85 for complex-bound), −21 for free 3-methylpyridine (−105 for complex-bound), −23 for pyridine. Remarkably, for all substrates the <sup>1</sup>H signal enhancement exceeds that obtained spontaneously in the high-field: ∼3–9 -fold for the free substrates and ∼10–20-fold for the complex-bound substrates.</div></div>","PeriodicalId":16267,"journal":{"name":"Journal of magnetic resonance","volume":"381 ","pages":"Article 107970"},"PeriodicalIF":1.9,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145305069","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-10-11DOI: 10.1016/j.jmr.2025.107986
Gennady Khirich , Guilherme Dal Poggetto , Matthew P. Augustine
Spin echoes (SE) refocus chemical shift evolution in weakly coupled homonuclear AX spin systems but leave scalar coupling evolution intact, leading to contamination of the in-phase (IP) echo with anti-phase (AP) coherence. In contrast, the so-called perfect echo (PE), which consists of two SEs flanking a central 90° pulse, can minimize the contribution of AP coherence at the echo, with complete refocusing of homonuclear scalar coupling evolution expected in AX systems based on product operator analysis. However, this precludes the consideration of the effects of differential scalar relaxation (DSR) from the interconversion of IP and AP coherences during a PE or a train of PE echoes (PE-CPMG). In this work, the effects of DSR on an AX spin system subject to a PE or PE-CPMG are considered, and the resulting theoretical spin dynamics are discussed. Exact analytical expressions characterizing the IP and AP coherences of each spin as a function of PE time τPE are derived for a single PE and show relaxation-induced oscillations (RIOs) superimposed onto the decay envelopes of IP coherences along with the concomitant generation of AP coherence, even when pulses are assumed to be ideal, instantaneous, and on-resonance for both spins. Numerical simulations reveal that oscillations in the decay envelop may persist under a PE-CPMG, and that the relaxation of the IP coherences is sensitive to pulse sequence timing in terms of both the repetition rate and total relaxation period. In general, rapid pulsing quenches the AP components and slows down relaxation, though RIOs persist. Notably, specific values of termed dispersion resonances – result in effectively decoupled and non-oscillatory IP decay profiles. We extend our analysis to an AX system undergoing a global two-state exchange process. In direct analogy to DSR, differences between Rex,I and Rex,S – each spin's exchange-induced relaxation enhancements – may induce oscillations in the IP decay profiles and concomitantly generate AP coherence. Moreover, each spin's effective relaxation enhancement is shown to depend on both Rex,I and Rex,S. The analysis of the spin dynamics reported here may be of interest in the further understanding, development, and optimization of PE and PE-CPMG-based pulse sequences, particularly those intended to be used for the accurate measurement and quantification of the underlying dynamics of a homonuclear AX systems undergoing chemical exchange.
{"title":"On the effects of differential scalar relaxation and chemical exchange in perfect echo NMR spectroscopy of AX spin systems","authors":"Gennady Khirich , Guilherme Dal Poggetto , Matthew P. Augustine","doi":"10.1016/j.jmr.2025.107986","DOIUrl":"10.1016/j.jmr.2025.107986","url":null,"abstract":"<div><div>Spin echoes (SE) refocus chemical shift evolution in weakly coupled homonuclear AX spin systems but leave scalar coupling evolution intact, leading to contamination of the in-phase (IP) echo with anti-phase (AP) coherence. In contrast, the so-called perfect echo (PE), which consists of two SEs flanking a central 90° pulse, can minimize the contribution of AP coherence at the echo, with complete refocusing of homonuclear scalar coupling evolution expected in AX systems based on product operator analysis. However, this precludes the consideration of the effects of differential scalar relaxation (DSR) from the interconversion of IP and AP coherences during a PE or a train of PE echoes (PE-CPMG). In this work, the effects of DSR on an AX spin system subject to a PE or PE-CPMG are considered, and the resulting theoretical spin dynamics are discussed. Exact analytical expressions characterizing the IP and AP coherences of each spin as a function of PE time <em>τ</em><sub><em>PE</em></sub> are derived for a single PE and show relaxation-induced oscillations (RIOs) superimposed onto the decay envelopes of IP coherences along with the concomitant generation of AP coherence, even when pulses are assumed to be ideal, instantaneous, and on-resonance for both spins. Numerical simulations reveal that oscillations in the decay envelop may persist under a PE-CPMG, and that the relaxation of the IP coherences is sensitive to pulse sequence timing in terms of both the repetition rate <span><math><mn>1</mn><mo>/</mo><msub><mi>τ</mi><mi>PE</mi></msub></math></span> and total relaxation period. In general, rapid pulsing quenches the AP components and slows down relaxation, though RIOs persist. Notably, specific values of <span><math><mn>1</mn><mo>/</mo><msub><mi>τ</mi><mi>PE</mi></msub></math></span> termed dispersion resonances – result in effectively decoupled and non-oscillatory IP decay profiles. We extend our analysis to an AX system undergoing a global two-state exchange process. In direct analogy to DSR, differences between <em>R</em><sub><em>ex,I</em></sub> and <em>R</em><sub><em>ex,S</em></sub> – each spin's exchange-induced relaxation enhancements – may induce oscillations in the IP decay profiles and concomitantly generate AP coherence. Moreover, each spin's effective relaxation enhancement is shown to depend on both <em>R</em><sub><em>ex,I</em></sub> and <em>R</em><sub><em>ex,S</em></sub>. The analysis of the spin dynamics reported here may be of interest in the further understanding, development, and optimization of PE and PE-CPMG-based pulse sequences, particularly those intended to be used for the accurate measurement and quantification of the underlying dynamics of a homonuclear AX systems undergoing chemical exchange.</div></div>","PeriodicalId":16267,"journal":{"name":"Journal of magnetic resonance","volume":"381 ","pages":"Article 107986"},"PeriodicalIF":1.9,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145314432","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-10-08DOI: 10.1016/j.jmr.2025.107985
Eugeny Kryukov , Alexander Karabanov , Denis Langlais , Dinu Iuga , Shashwata Moitra , Jeremy Good
We show that the magnetic field in cryogen-free magnets is stable enough for high-resolution solid-state and liquid-state NMR. The same magnet can be used at different magnetic fields, which can be changed every day without compromising the spectral resolution. The magnet performance was demonstrated on a series of solid-state and liquid-state NMR experiments. Hardware and software correction can additionally be applied to improve the quality of 1D and 2D NMR spectra.
{"title":"An experimental demonstration of the use of a cryogen-free system for high-resolution 1D and 2D solid and liquid state NMR","authors":"Eugeny Kryukov , Alexander Karabanov , Denis Langlais , Dinu Iuga , Shashwata Moitra , Jeremy Good","doi":"10.1016/j.jmr.2025.107985","DOIUrl":"10.1016/j.jmr.2025.107985","url":null,"abstract":"<div><div>We show that the magnetic field in cryogen-free magnets is stable enough for high-resolution solid-state and liquid-state NMR. The same magnet can be used at different magnetic fields, which can be changed every day without compromising the spectral resolution. The magnet performance was demonstrated on a series of solid-state and liquid-state NMR experiments. Hardware and software correction can additionally be applied to improve the quality of 1D and 2D NMR spectra.</div></div>","PeriodicalId":16267,"journal":{"name":"Journal of magnetic resonance","volume":"381 ","pages":"Article 107985"},"PeriodicalIF":1.9,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145268537","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-10-31DOI: 10.1016/j.jmr.2025.107991
Kathy Sharon Isaac , Phuong Mai Le , Theodore Street , Akila Wijerathna-Yapa , Stanislav Sokolenko
Quantitative NMR is widely utilized in isotopic ratio measurement for determining the origins and authenticity of chemical compounds. Achieving high precision required for such analyses depends on accurately separating signal from noise, which is essential for reliable quantification of resonance peak areas. In this study, we present rnmrfit 2.0, an NMR peak-fitting tool tailored for high precision isotopic analysis. This new version incorporates semi-global peak fitting with automated peak region selection, achieving greater robustness and computational efficiency than previously reported. The newly developed software was used to explore the impact of two common spectral processing techniques, line broadening and zero filling, as well as the choice of baseline span on peak fitting precision. All three were found to have a significant impact on fit precision, with optimal settings for line broadening and zero filling deviating from what is commonly recommended for 13C spectra, at 1–3 Hz and 0.5–1.0, respectively. Compared to commercial tools including TopSpin and MestReNova, rnmrfit demonstrated superior precision and trueness, achieving precision as low as 0.26% for 2H and 0.16% for 13C. The new version of rnmrfit is available as an open-source executable, offering a scalable solution for isotopic analysis with minimal user input, paving the way for more reliable isotopic quantification.
{"title":"Advancing quantitative NMR for high-precision isotopic analysis with rnmrfit 2.0","authors":"Kathy Sharon Isaac , Phuong Mai Le , Theodore Street , Akila Wijerathna-Yapa , Stanislav Sokolenko","doi":"10.1016/j.jmr.2025.107991","DOIUrl":"10.1016/j.jmr.2025.107991","url":null,"abstract":"<div><div>Quantitative NMR is widely utilized in isotopic ratio measurement for determining the origins and authenticity of chemical compounds. Achieving high precision required for such analyses depends on accurately separating signal from noise, which is essential for reliable quantification of resonance peak areas. In this study, we present rnmrfit 2.0, an NMR peak-fitting tool tailored for high precision isotopic analysis. This new version incorporates semi-global peak fitting with automated peak region selection, achieving greater robustness and computational efficiency than previously reported. The newly developed software was used to explore the impact of two common spectral processing techniques, line broadening and zero filling, as well as the choice of baseline span on peak fitting precision. All three were found to have a significant impact on fit precision, with optimal settings for line broadening and zero filling deviating from what is commonly recommended for 13C spectra, at 1–3 Hz and 0.5–1.0, respectively. Compared to commercial tools including TopSpin and MestReNova, rnmrfit demonstrated superior precision and trueness, achieving precision as low as 0.26% for 2H and 0.16% for 13C. The new version of rnmrfit is available as an open-source executable, offering a scalable solution for isotopic analysis with minimal user input, paving the way for more reliable isotopic quantification.</div></div>","PeriodicalId":16267,"journal":{"name":"Journal of magnetic resonance","volume":"381 ","pages":"Article 107991"},"PeriodicalIF":1.9,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145524922","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-10-30DOI: 10.1016/j.jmr.2025.107990
Kaja Tušar , Igor Serša
Spatial encoding in MRI is usually performed using gradient coils that produce a linearly increasing magnetic field Bz in a desired spatial direction such that its gradient is constant. However, it has been shown that spatial encoding in MRI can also be performed with coils that produce nonlinear magnetic fields. In this study, the performance of different types of nonlinear encoding coils, which have a simple design based on the use of a straight wire segment as a building block and a source of a highly nonlinear magnetic field, was experimentally tested in 2D and by simulation in 3D on coils with a nonsymmetric and a symmetric arrangement of these wire segments. All images were reconstructed using our newly presented method, in which the signals are first transformed from the time- to the frequency-domain, yielding a distorted image (spectrum), which is then geometrically and intensity corrected. The quality of the reconstructed images was quantified by comparing them with corresponding reference images obtained with conventional gradient coils. The reconstruction method was accurate for all tested encoding coils and showed that the symmetric coil type produced results that required significantly less corrections compared to the nonsymmetric coil type. Quantitative image quality measurements showed that all encoding coils, despite large differences in the magnetic field of the encoding coils, produce images of similar quality. The results of the study may help advance the design of “gradient” coils towards freer geometries, higher magnetic field gradients or lower inductance and thus faster switching times.
{"title":"Magnetic resonance imaging using a straight wire magnetic field for spatial signal encoding: Imaging verification with 2D experiments and 3D modeling","authors":"Kaja Tušar , Igor Serša","doi":"10.1016/j.jmr.2025.107990","DOIUrl":"10.1016/j.jmr.2025.107990","url":null,"abstract":"<div><div>Spatial encoding in MRI is usually performed using gradient coils that produce a linearly increasing magnetic field <em>B</em><sub><em>z</em></sub> in a desired spatial direction such that its gradient is constant. However, it has been shown that spatial encoding in MRI can also be performed with coils that produce nonlinear magnetic fields. In this study, the performance of different types of nonlinear encoding coils, which have a simple design based on the use of a straight wire segment as a building block and a source of a highly nonlinear magnetic field, was experimentally tested in 2D and by simulation in 3D on coils with a nonsymmetric and a symmetric arrangement of these wire segments. All images were reconstructed using our newly presented method, in which the signals are first transformed from the time- to the frequency-domain, yielding a distorted image (spectrum), which is then geometrically and intensity corrected. The quality of the reconstructed images was quantified by comparing them with corresponding reference images obtained with conventional gradient coils. The reconstruction method was accurate for all tested encoding coils and showed that the symmetric coil type produced results that required significantly less corrections compared to the nonsymmetric coil type. Quantitative image quality measurements showed that all encoding coils, despite large differences in the magnetic field of the encoding coils, produce images of similar quality. The results of the study may help advance the design of “gradient” coils towards freer geometries, higher magnetic field gradients or lower inductance and thus faster switching times.</div></div>","PeriodicalId":16267,"journal":{"name":"Journal of magnetic resonance","volume":"381 ","pages":"Article 107990"},"PeriodicalIF":1.9,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145446981","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-09-27DOI: 10.1016/j.jmr.2025.107969
Jinhao Liu , Miutian Wang , Wenchen Wang , Yaohui Wang , Wenhui Yang , Weimin Wang , Feng Liu
This study proposes a simple and computationally efficient method to optimize the structural design parameters of passive shimming slots, aiming to improve magnetic field homogeneity in cryogen-free 3 T/200 mm superconducting magnets used across diverse application environments. The proposed method combines Latin Hypercube Sampling (LHS), utilizing over 300 sampled configurations, with a linear programming (LP)-based optimization framework to explore high-dimensional design spaces while adhering to structural constraints. The method was applied to four distinct magnets, each characterized by unique field inhomogeneity patterns resulting from manufacturing and assembly variations. Through harmonic decomposition, system-specific sensitivities were identified and effectively mitigated using customized passive shimming strategies tailored to each magnet. The optimization process achieved substantial improvements in magnetic field homogeneity, with peak-to-peak (PP) values enhanced to 12.16, 10.04, 27.28, and 54.59 parts per million (ppm) for Magnets 1 to 4, respectively. Correspondingly, the root-mean-square error (RMSE) homogeneity improved to 2.28, 1.98, 5.07, and 9.68 ppm. Furthermore, the magnitudes of all harmonic terms were reduced by 1-2 orders of magnitude, with suppression levels exceeding 90%, while minimizing the use of ferromagnetic materials. The practical feasibility of the proposed strategy was validated on-site: Magnet 1 successfully delivered high-quality animal MRI imaging with excellent signal-to-noise ratios (SNRs), and the remaining magnets are currently undergoing final calibration and delivery. This work presents a robust and scalable optimization framework for precise and resource-efficient passive shimming, offering valuable guidance for future magnet design, customization, and deployment in biomedical and industrial applications.
{"title":"Passive shimming performance in 3 T MRI systems: Influence of shim parameters under varying magnet field distributions","authors":"Jinhao Liu , Miutian Wang , Wenchen Wang , Yaohui Wang , Wenhui Yang , Weimin Wang , Feng Liu","doi":"10.1016/j.jmr.2025.107969","DOIUrl":"10.1016/j.jmr.2025.107969","url":null,"abstract":"<div><div>This study proposes a simple and computationally efficient method to optimize the structural design parameters of passive shimming slots, aiming to improve magnetic field homogeneity in cryogen-free 3 T/200 mm superconducting magnets used across diverse application environments. The proposed method combines Latin Hypercube Sampling (LHS), utilizing over 300 sampled configurations, with a linear programming (LP)-based optimization framework to explore high-dimensional design spaces while adhering to structural constraints. The method was applied to four distinct magnets, each characterized by unique field inhomogeneity patterns resulting from manufacturing and assembly variations. Through harmonic decomposition, system-specific sensitivities were identified and effectively mitigated using customized passive shimming strategies tailored to each magnet. The optimization process achieved substantial improvements in magnetic field homogeneity, with peak-to-peak (PP) values enhanced to 12.16, 10.04, 27.28, and 54.59 parts per million (ppm) for Magnets 1 to 4, respectively. Correspondingly, the root-mean-square error (RMSE) homogeneity improved to 2.28, 1.98, 5.07, and 9.68 ppm. Furthermore, the magnitudes of all harmonic terms were reduced by 1-2 orders of magnitude, with suppression levels exceeding 90%, while minimizing the use of ferromagnetic materials. The practical feasibility of the proposed strategy was validated on-site: Magnet 1 successfully delivered high-quality animal MRI imaging with excellent signal-to-noise ratios (SNRs), and the remaining magnets are currently undergoing final calibration and delivery. This work presents a robust and scalable optimization framework for precise and resource-efficient passive shimming, offering valuable guidance for future magnet design, customization, and deployment in biomedical and industrial applications.</div></div>","PeriodicalId":16267,"journal":{"name":"Journal of magnetic resonance","volume":"381 ","pages":"Article 107969"},"PeriodicalIF":1.9,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145202542","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-10-13DOI: 10.1016/j.jmr.2025.107987
Dominic O. Couillard, Peiyuan Yan, Mohammad Sadegh Zamiri, Bruce J. Balcom, Benedict Newling
Relaxation and relaxation–diffusion correlation measurements have emerged as essential tools for magnetic resonance of materials. Examples of correlation measurements include the –, the –, and the – variants. In this paper, we describe the implementation and validation of a – relaxation correlation measurement. It is shown that this technique effectively distinguishes microscopic environments dominated by local field inhomogeneity from those dominated by nuclear spin–spin interactions. The method is demonstrated in simulation and in glass bead packs.
{"title":"T2–T2∗ relaxation correlation measurement","authors":"Dominic O. Couillard, Peiyuan Yan, Mohammad Sadegh Zamiri, Bruce J. Balcom, Benedict Newling","doi":"10.1016/j.jmr.2025.107987","DOIUrl":"10.1016/j.jmr.2025.107987","url":null,"abstract":"<div><div>Relaxation and relaxation–diffusion correlation measurements have emerged as essential tools for magnetic resonance of materials. Examples of correlation measurements include the <span><math><msub><mrow><mi>T</mi></mrow><mrow><mn>1</mn></mrow></msub></math></span>–<span><math><msub><mrow><mi>T</mi></mrow><mrow><mn>2</mn></mrow></msub></math></span>, the <span><math><msub><mrow><mi>T</mi></mrow><mrow><mn>2</mn></mrow></msub></math></span>–<span><math><mi>D</mi></math></span>, and the <span><math><msub><mrow><mi>T</mi></mrow><mrow><mn>1</mn></mrow></msub></math></span>–<span><math><msubsup><mrow><mi>T</mi></mrow><mrow><mn>2</mn></mrow><mrow><mo>∗</mo></mrow></msubsup></math></span> variants. In this paper, we describe the implementation and validation of a <span><math><msub><mrow><mi>T</mi></mrow><mrow><mn>2</mn></mrow></msub></math></span>–<span><math><msubsup><mrow><mi>T</mi></mrow><mrow><mn>2</mn></mrow><mrow><mo>∗</mo></mrow></msubsup></math></span> relaxation correlation measurement. It is shown that this technique effectively distinguishes microscopic environments dominated by local field inhomogeneity from those dominated by nuclear spin–spin interactions. The method is demonstrated in simulation and in glass bead packs.</div></div>","PeriodicalId":16267,"journal":{"name":"Journal of magnetic resonance","volume":"381 ","pages":"Article 107987"},"PeriodicalIF":1.9,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145331486","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-09-24DOI: 10.1016/j.jmr.2025.107968
Janez Stepišnik , Aleš Mohorič
Nuclear magnetic resonance is a powerful technique for examining chemical exchange in liquids by observing how molecular structures evolve. The Carr-Purcell-Meiboom-Gill technique, one of key NMR methods, enables the detection of molecular conformation fluctuations and their influence on observed chemical shifts. This study proposes how NMR measurements of chemical exchange processes can be interpreted using a molecular conformation fluctuation spectrum framework together with chemical Langevin equations. Experimental results obtained for sucrose solutions support the proposed approach, revealing insights into chemical exchange dynamics and spectral line behavior.
{"title":"NMR of chemical exchange: Revisited","authors":"Janez Stepišnik , Aleš Mohorič","doi":"10.1016/j.jmr.2025.107968","DOIUrl":"10.1016/j.jmr.2025.107968","url":null,"abstract":"<div><div>Nuclear magnetic resonance is a powerful technique for examining chemical exchange in liquids by observing how molecular structures evolve. The Carr-Purcell-Meiboom-Gill technique, one of key NMR methods, enables the detection of molecular conformation fluctuations and their influence on observed chemical shifts. This study proposes how NMR measurements of chemical exchange processes can be interpreted using a molecular conformation fluctuation spectrum framework together with chemical Langevin equations. Experimental results obtained for sucrose solutions support the proposed approach, revealing insights into chemical exchange dynamics and spectral line behavior.</div></div>","PeriodicalId":16267,"journal":{"name":"Journal of magnetic resonance","volume":"381 ","pages":"Article 107968"},"PeriodicalIF":1.9,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145156202","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}