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Distinct HLA Haplotypes Are Associated With an Altered Strength of SARS-CoV-2-Specific T-Cell Responses and Unfavorable Disease Courses
IF 4.5 3区 医学 Q2 IMMUNOLOGY Pub Date : 2025-04-21 DOI: 10.1002/eji.202451497
C. Dörnte, A. Datsi, V. Traska, J. Kostyra, M. Wagner, O. Brauns, C. Lamsfuß, H. Winkels, V. Balz, J. Enczmann, O. Adams, L. Mueller, H. Baurmann, B. Eiz-Vesper, A. Bonifacius, R. V. Sorg, C. Dose, J. Schmitz, A. Richter, J. Fischer, M. Schuster

Infection with SARS-CoV-2 results in mild to severe COVID-19 disease courses. Several studies showed the association of impaired T-cell responses and certain HLA haplotypes with disease severity. However, it remained unclear if T-cell activation was compromised due to a general reduction of presented epitopes or other intrinsic factors within APCs or T cells. Furthermore, a potential reduction of presented epitopes would suggest if an upcoming SARS-CoV-2 variant could escape T-cell immunity. Hence, knowledge about the T-cell epitope landscape of SARS-CoV-2 would allow to better understand mechanisms leading to severe disease and to estimate the potential stability of the T-cell response in light of virus evolution, which might provide insights for future vaccine designs. Hence, in the present study, the T-cell epitope landscape of SARS-CoV-2 was determined via in vitro T-cell stimulation plus in silico prediction. HLAs associated with mild and severe disease courses showed almost the same potential in epitope presentation, suggesting intrinsic factors of APCs or T cells as contributors to the more severe disease courses. As T-cell epitopes did also not originate from regions of SARS-CoV-2 having shown high mutation rates in the past, a relatively stable T-cell response can be expected regarding new SARS-CoV-2 strains in the future. Analysis of the T-cell epitope landscape of SARS-CoV-2 suggests T-cell intrinsic factors as likely modulators of disease severity and that the capacity of MHC-peptide presentation remains stable among circulating SARS-CoV-2 viral strains.

感染 SARS-CoV-2 会导致轻度到严重的 COVID-19 病程。一些研究表明,T 细胞反应受损和某些 HLA 单倍型与疾病严重程度有关。然而,目前仍不清楚 T 细胞活化是否会因 APC 或 T 细胞内呈现的表位或其他内在因素的普遍减少而受到影响。此外,表位的潜在减少将表明即将出现的 SARS-CoV-2 变体是否能逃避 T 细胞免疫。因此,了解 SARS-CoV-2 的 T 细胞表位情况有助于更好地理解导致严重疾病的机制,并根据病毒进化情况估计 T 细胞反应的潜在稳定性,从而为未来的疫苗设计提供启示。因此,在本研究中,通过体外 T 细胞刺激和硅学预测确定了 SARS-CoV-2 的 T 细胞表位图。与轻症和重症病程相关的 HLAs 在表位呈现方面表现出几乎相同的潜力,这表明 APCs 或 T 细胞的内在因素是导致重症病程的因素。由于 T 细胞表位也并非来自 SARS-CoV-2 过去出现高突变率的区域,因此可以预计未来新的 SARS-CoV-2 株系会出现相对稳定的 T 细胞反应。对 SARS-CoV-2 的 T 细胞表位图的分析表明,T 细胞内在因素可能是疾病严重程度的调节因素,而且在循环的 SARS-CoV-2 病毒株中,MHC-肽的呈现能力保持稳定。
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引用次数: 0
Gluten-Free Diet Induces Small-Scale Changes Across Multiple T-Cell Subsets in NOD Mice
IF 4.5 3区 医学 Q2 IMMUNOLOGY Pub Date : 2025-04-21 DOI: 10.1002/eji.202451559
Veronika Niederlova, Juraj Michalik, Barbora Drabonova, Radka Cisarova, David Funda, Ondrej Stepanek

Nonobese diabetic (NOD) mice are a widely used animal model to study mechanisms leading to autoimmune diabetes. A gluten-free diet reduces and delays the incidence of diabetes in NOD mice, but the underlying mechanisms remain largely unknown. In this study, we performed single-cell transcriptomic and flow cytometry analysis of T cells and innate lymphocytes in the spleen and pancreatic lymph nodes of NOD mice fed a gluten-free or standard diet. We observed that the gluten-free diet did not induce a substantial alteration in the abundance or phenotype of any lymphocyte subset that would directly explain its protective effect against diabetes. However, the gluten-free diet induced subtle changes in the differentiation of subsets with previously proposed protective roles in diabetes development, such as Tregs, activated γδT cells, and NKT cells. Globally, the gluten-free diet paradoxically promoted activation and effector differentiation across multiple subpopulations and induced genes regulated by IL-2, IL-7, and IL-15. In contrast, the standard diet induced type I interferon-responsive genes. Overall, the gluten-free diet might prevent diabetes in NOD mice by inducing small-scale changes in multiple cell types rather than acting on a specific lymphocyte subset.

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引用次数: 0
Pamidronate-Induced Clinical Remission in Chronic Non-bacterial Osteomyelitis Is Associated with Reduced Vγ9Vδ2 T-Cell Receptor Expression
IF 4.5 3区 医学 Q2 IMMUNOLOGY Pub Date : 2025-04-21 DOI: 10.1002/eji.202451609
Lily Watson, Athimalaipet V Ramanan, Elizabeth Oliver, Francisca Segers, Gareth W. Jones, Christine Chew, Anu Goenka

In children with chronic non-bacterial osteomyelitis, clinical and transcriptional changes in peripheral blood were examined after pamidronate treatment. Clinically effective treatment with pamidronate was associated with reduced expression of two genes (TRDV2 and TRGV9) that encode the subunits of the Vγ9Vδ2 T-cell receptor.

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引用次数: 0
Maternal Administration of Probiotics Augments IL17-Committed γδ T Cells in the Newborn Lung
IF 4.5 3区 医学 Q2 IMMUNOLOGY Pub Date : 2025-04-21 DOI: 10.1002/eji.202451051
Yohannes Tafesse, Arnaud Köhler, Guillem Sanchez Sanchez, Patricia Brito Rodrigues, Marko Verce, Panagiotis Vitsos, Isoline Verdebout, Moosa Rezwani, Maria Papadopoulou, Amandine Everard, Véronique Flamand, David Vermijlen

The early life period is increasingly being recognized as a window of opportunity to shape immunity, where microbiota and related probiotics have an important impact. Innate γδ T cells are the first T cells generated in utero, populating epithelial tissues such as the lung and contributing to tissue protection through, for example, IL17 production. Here, we studied the influence of maternal microbiota and probiotic supplementation during pregnancy on innate γδ T cells in the lung and thymus of newborn mice. Detailed time-kinetic experiments showed that at birth, the murine lung T cell population was specifically dominated by IL17-committed γδ T cells expressing an invariant Vγ6Vδ1 TCR. Single-cell RNA-sequencing showed that the biased IL17-commitment of perinatal lung γδT cells is highly conserved between mice and humans. While maternal microbiota depletion with antibiotics tended to decrease the frequency of the lung Vγ6 T cells of the offspring at birth, the maternal administration of Lacticaseibacillus rhamnosus (L.rhm.), but not of Bifidobacterium animalis subsp. lactis (B.lac.), increased significantly their frequency, resulting in the augmentation of the IL17-commitment of the mouse lung T cell compartment. Altogether, our data indicate that the maternal microbiota contributes to the shaping of IL17-committed γδT cells in the lungs of newborns and that maternal administration of specific probiotic strains can enhance this process.

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引用次数: 0
Updating the Discontinuity Theory to the Extended Immunity: The Symmunobiome Concept
IF 4.5 3区 医学 Q2 IMMUNOLOGY Pub Date : 2025-04-19 DOI: 10.1002/eji.202451528
Federico Boem, Ingrid Lamminpää, Amedeo Amedei

The immune system (IS) is commonly understood as a system composed of specific cells and tissues that have evolved to contrast pathogens and defend the host. By virtue of this capacity, it has come to be considered capable of making an essential distinction, that between self versus non-self, which would contribute to a clear identity of the organism. However, in the wake of evolution and ecology, growing evidence suggests that the so-called immune system, which also evolved from symbiotic interactions with external agents, is not just a defensive system that merely protects the organism but, on the contrary, is involved in many global regulatory and homeostatic functions. Moreover, in performing these many functions, IS is not only an ensemble of host cells and tissues but functionally is constitutively determined by the interaction with a set of associated microorganisms, that is, the human microbiome. In this scenario, it is open-and-shut that the microbiome itself is a functional part of this extended immune system. Organisms and microbiomes together, therefore, form a functional whole, which constitutes a privileged form of biological organization. In light of this evidence showing the inadequacy of traditional accounts, we propose to extend and supplement the current IS conceptualization by introducing the notion of the symmunobiome. With this term, we intend to characterize the microbiome's own and unavoidable component to overall immune functionality. Therefore, we suggest a new immune system determination, articulated in three linked pillars—adaptive immunity, innate immunity, and symmunobiome—to better grasp the diverse functionality of extended immunity.

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引用次数: 0
Dimethyl Fumarate Negatively Regulates MYC Signaling and Promotes Cell-Cycle Arrest in T-Cells through a GSH-Dependent Mechanism
IF 4.5 3区 医学 Q2 IMMUNOLOGY Pub Date : 2025-04-19 DOI: 10.1002/eji.202451399
Kazuya Sato, Shin-ichiro Kawaguchi, Junko Izawa, Takashi Ikeda, Kiyomi Mashima, Norihito Takayama, Hiroko Hayakawa, Kaoru Tominaga, Hitoshi Endo, Yoshinobu Kanda

Recent evidence indicates that the TCA cycle metabolite fumarate plays a specific role in modulating signaling pathways in immune cells. We have previously shown that dimethyl fumarate (DMF) reduces glutathione (GSH) activity and causes the accumulation of cellular reactive oxygen species (ROS), thereby compromising effector immune responses and metabolic activities in activated T-cells. However, the precise mechanism by which DMF modulates T-cell signaling pathways remains to be elucidated. This study demonstrates that DMF inhibits T-cell proliferation, independent of T-cell receptor (TCR) engagement, and this response is fully reversible by replenishing GSH. Immunoblot analysis showed that DMF had different impacts on TCR downstream signaling by decreasing MYC expression while promoting the phosphorylation of Akt and Erk1/2. Cell cycle analysis demonstrated that exposure to DMF led to negative regulation of cell cycle-related proteins and induced T-cells into G0/G1 arrest, which was also rescued by antioxidants. Several genes related to GSH synthesis were upregulated at the same time, suggesting that a potential compensatory response may occur to reduce oxidative burst following DMF treatment. Our results suggest that DMF-mediated oxidative stress alters a range of cell signaling pathways, including MYC, leading to cell cycle arrest and a defective proliferative response of T-cells during activation.

最近的证据表明,TCA 循环代谢产物富马酸盐在调节免疫细胞信号通路方面发挥着特殊作用。我们之前已经证明,富马酸二甲酯(DMF)会降低谷胱甘肽(GSH)活性,导致细胞活性氧(ROS)积累,从而损害活化 T 细胞的效应免疫反应和代谢活动。然而,DMF 调节 T 细胞信号通路的确切机制仍有待阐明。本研究表明,DMF能抑制T细胞增殖,与T细胞受体(TCR)的参与无关,而且这种反应通过补充GSH是完全可逆的。免疫印迹分析表明,DMF对TCR下游信号有不同的影响,它能降低MYC的表达,同时促进Akt和Erk1/2的磷酸化。细胞周期分析表明,暴露于DMF会导致细胞周期相关蛋白的负调控,并诱导T细胞进入G0/G1停滞期,抗氧化剂也能挽救这种情况。与 GSH 合成相关的几个基因同时上调,这表明在 DMF 处理后可能会出现一种潜在的补偿反应,以减少氧化猝灭。我们的研究结果表明,DMF 介导的氧化应激改变了包括 MYC 在内的一系列细胞信号通路,导致细胞周期停滞和活化过程中 T 细胞增殖反应缺陷。
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引用次数: 0
Human IL-6-Producing B Cells Promote the Differentiation of Monocytes Toward an Anti-Inflammatory CD16⁺CD163⁺CD206⁺PD-L1⁺ Phenotype in Tuberculosis
IF 4.5 3区 医学 Q2 IMMUNOLOGY Pub Date : 2025-04-19 DOI: 10.1002/eji.202451509
Alan Bénard, Luciana Balboa, Maxime Caouaille, Lea Ravon-Katossky, Etienne Meunier, Simon Fillatreau, Maria Del Carmen Sasiain, Olivier Neyrolles, Denis Hudrisier

The polarization of the monocyte/macrophage compartment toward an anti-inflammatory profile is considered detrimental in tuberculosis (TB), but the factors controlling M2 polarization in this context are still poorly understood. Here, we found that B cells promote the differentiation of human monocytes toward an M2-like activation program through a process primarily dependent on IL-6 and the activation of STAT3 signaling in monocytes. This confers monocytes with immunomodulatory properties characterized by a reduced ability to produce proinflammatory cytokines and to stimulate IFNγ secretion by allogeneic T cells. Our findings were validated using B cells from TB patients, which constitutively produce high levels of IL-6, underscoring the clinical relevance of our experimental observations. Collectively, our results indicate that human B-cell-derived IL-6 might impair TB immunity by driving monocyte polarization toward an anti-inflammatory phenotype.

在结核病(TB)中,单核细胞/巨噬细胞向抗炎特征的极化被认为是有害的,但在这种情况下控制 M2 极化的因素仍然鲜为人知。在这里,我们发现 B 细胞通过一个主要依赖于 IL-6 和单核细胞中 STAT3 信号激活的过程,促进人类单核细胞向类似 M2 的活化程序分化。这使单核细胞具有免疫调节特性,其特点是产生促炎细胞因子和刺激异体T细胞分泌IFNγ的能力降低。我们的研究结果通过结核病患者的 B 细胞得到了验证,这些 B 细胞能产生高水平的 IL-6,从而强调了我们实验观察结果的临床意义。总之,我们的研究结果表明,人B细胞衍生的IL-6可能会促使单核细胞极化为抗炎表型,从而损害结核病的免疫力。
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引用次数: 0
Combined Deletion of ZFP36L1 and ZFP36L2 Drives Superior Cytokine Production in T Cells at the Cost of Cell Fitness
IF 4.5 3区 医学 Q2 IMMUNOLOGY Pub Date : 2025-04-18 DOI: 10.1002/eji.202451641
Nordin D. Zandhuis, Antonia Bradarić, Carmen van der Zwaan, Arie J. Hoogendijk, Branka Popović, Monika C. Wolkers

A key feature of cytotoxic CD8+ T cells for eliminating pathogens and malignant cells is their capacity to produce proinflammatory cytokines, which include TNF and IFNγ. Provided that these cytokines are highly toxic, a tight control of their production is imperative. RNA-binding proteins (RBPs) are essential for the fine-tuning of cytokine production. The role of the RBP ZFP36L1 and its sister protein ZFP36L2 herein has been established, but their relative contribution to cytokine production is not well understood. We here compared the effect of ZFP36L1 and ZFP36L2 single and double deficiency in murine effector CD8+ T cells. Whereas single deficient T cells significantly increased cytokine production, double deficiency completely unleashed the cytokine production. Not only the TNF production was substantially prolonged in double-deficient T cells. Also, the production of IFNγ reached unprecedented levels with >90% IFNγ-producing T cells compared with 3% in WT T cells after 3 days of continuous activation. This continuous cytokine production by double-deficient T cells was also observed in tumor-infiltrating lymphocytes in vivo, however, with no effect on tumor growth. ZFP36L1 and ZFP36L2 double deficiency resulted in decreased cell viability, impaired STAT5 signaling, and dysregulated cell cycle progression. In conclusion, while combined deletion in ZFP36L1 and ZFP36L2 can drive continuous cytokine production even upon chronic activation, safeguards are in place to counteract such super-cytokine producers.

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引用次数: 0
Rapid Detection of Anti-IFN-α2 Autoantibodies Using a New Automated VIDAS Assay Prototype
IF 4.5 3区 医学 Q2 IMMUNOLOGY Pub Date : 2025-04-14 DOI: 10.1002/eji.202451516
Sylvie Pons, Laurence Generenaz, Adrian Gervais, Anne Puel, Paul Bastard, Nathalie Renard, Valerie Guyot, Cecile Vinit, Fei Zheng, Karen Brengel-Pesce, Kahina Saker, Jean-Christophe Richard, Alexis Mathian, Zahir Amoura, Karim Dorgham, Guy Gorochov, Jean-Laurent Casanova, Aurore Fleurie, Sophie Trouillet-Assant

Autoantibodies neutralizing Type I interferons increase the risk of severe viral diseases and are linked to autoimmune conditions. The automated VIDAS assay is suitable for anti-IFN-α2 IgGs quantification, offering a swift, reliable, user-friendly, single test for clinical management.

{"title":"Rapid Detection of Anti-IFN-α2 Autoantibodies Using a New Automated VIDAS Assay Prototype","authors":"Sylvie Pons,&nbsp;Laurence Generenaz,&nbsp;Adrian Gervais,&nbsp;Anne Puel,&nbsp;Paul Bastard,&nbsp;Nathalie Renard,&nbsp;Valerie Guyot,&nbsp;Cecile Vinit,&nbsp;Fei Zheng,&nbsp;Karen Brengel-Pesce,&nbsp;Kahina Saker,&nbsp;Jean-Christophe Richard,&nbsp;Alexis Mathian,&nbsp;Zahir Amoura,&nbsp;Karim Dorgham,&nbsp;Guy Gorochov,&nbsp;Jean-Laurent Casanova,&nbsp;Aurore Fleurie,&nbsp;Sophie Trouillet-Assant","doi":"10.1002/eji.202451516","DOIUrl":"https://doi.org/10.1002/eji.202451516","url":null,"abstract":"<p>Autoantibodies neutralizing Type I interferons increase the risk of severe viral diseases and are linked to autoimmune conditions. The automated VIDAS assay is suitable for anti-IFN-α2 IgGs quantification, offering a swift, reliable, user-friendly, single test for clinical management.\u0000\u0000 <figure>\u0000 <div><picture>\u0000 <source></source></picture><p></p>\u0000 </div>\u0000 </figure></p>","PeriodicalId":165,"journal":{"name":"European Journal of Immunology","volume":"55 4","pages":""},"PeriodicalIF":4.5,"publicationDate":"2025-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/eji.202451516","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143826863","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metabolic Dialogue Shapes Immune Response in the Tumor Microenvironment
IF 4.5 3区 医学 Q2 IMMUNOLOGY Pub Date : 2025-04-14 DOI: 10.1002/eji.202451102
Fengxia Gao, Rushil Shah, Gang Xin, Ruoning Wang

The fate of immune cells is fundamentally linked to their metabolic program, which is also influenced by the metabolic landscape of their environment. The tumor microenvironment represents a unique system for intercellular metabolic interactions, where tumor-derived metabolites suppress effector CD8+ T cells and promote tumor-promoting macrophages, reinforcing an immune-suppressive niche. This review will discuss recent advancements in metabolism research, exploring the interplay between various metabolites and their effects on immune cells within the tumor microenvironment.

{"title":"Metabolic Dialogue Shapes Immune Response in the Tumor Microenvironment","authors":"Fengxia Gao,&nbsp;Rushil Shah,&nbsp;Gang Xin,&nbsp;Ruoning Wang","doi":"10.1002/eji.202451102","DOIUrl":"https://doi.org/10.1002/eji.202451102","url":null,"abstract":"<p>The fate of immune cells is fundamentally linked to their metabolic program, which is also influenced by the metabolic landscape of their environment. The tumor microenvironment represents a unique system for intercellular metabolic interactions, where tumor-derived metabolites suppress effector CD8<sup>+</sup> T cells and promote tumor-promoting macrophages, reinforcing an immune-suppressive niche. This review will discuss recent advancements in metabolism research, exploring the interplay between various metabolites and their effects on immune cells within the tumor microenvironment.</p>","PeriodicalId":165,"journal":{"name":"European Journal of Immunology","volume":"55 4","pages":""},"PeriodicalIF":4.5,"publicationDate":"2025-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/eji.202451102","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143827086","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
European Journal of Immunology
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