{"title":"sparse-lm: Sparse linear regression models in\u0000Python","authors":"Luis Barroso-Luque, Fengyu Xie","doi":"10.21105/joss.05867","DOIUrl":"https://doi.org/10.21105/joss.05867","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-12-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138950575","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"otoole: OSeMOSYS Tools for Energy Work","authors":"Trevor Barnes, W. Usher","doi":"10.21105/joss.05511","DOIUrl":"https://doi.org/10.21105/joss.05511","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-12-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138994324","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"MiscMetabar: an R package to facilitate visualization\u0000and reproducibility in metabarcoding analysis","authors":"Adrien Taudière","doi":"10.21105/joss.06038","DOIUrl":"https://doi.org/10.21105/joss.06038","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138960220","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Seaduck: A python package for Eulerian and Lagrangian\u0000interpolation on ocean datasets","authors":"Wenrui Jiang, Thomas W. N. Haine, Mattia Almansi","doi":"10.21105/joss.05967","DOIUrl":"https://doi.org/10.21105/joss.05967","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138963193","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Stephen Hudson, Jeffrey Larson, John-Luke Navarro, Stefan M. Wild
{"title":"libEnsemble: A complete Python toolkit for dynamic\u0000ensembles of calculations","authors":"Stephen Hudson, Jeffrey Larson, John-Luke Navarro, Stefan M. Wild","doi":"10.21105/joss.06031","DOIUrl":"https://doi.org/10.21105/joss.06031","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-12-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138965184","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
D. Kempf, Ole Klein, Robert Kutri, Robert Scheichl, Peter Bastian
{"title":"parafields: A generator for distributed, stationary\u0000Gaussian processes","authors":"D. Kempf, Ole Klein, Robert Kutri, Robert Scheichl, Peter Bastian","doi":"10.21105/joss.05735","DOIUrl":"https://doi.org/10.21105/joss.05735","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-12-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138995311","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Marjan Albooyeh, Chris Jones, Rainier Barrett, Eric Jankowski
flowerMD is a package for reproducibly performing multi-stage HOOMD-blue (Anderson et al., 2020) simulation workflows. It enables the programmatic specification of tasks including definition of molecular structures, forcefield definition and application and chaining together simulation stages (e
{"title":"FlowerMD: Flexible Library of Organic Workflows and\u0000Extensible Recipes for Molecular Dynamics","authors":"Marjan Albooyeh, Chris Jones, Rainier Barrett, Eric Jankowski","doi":"10.21105/joss.05989","DOIUrl":"https://doi.org/10.21105/joss.05989","url":null,"abstract":"flowerMD is a package for reproducibly performing multi-stage HOOMD-blue (Anderson et al., 2020) simulation workflows. It enables the programmatic specification of tasks including definition of molecular structures, forcefield definition and application and chaining together simulation stages (e","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139000929","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Riccardo Cadei, N. Khoshnevis, Kwonsang Lee, Daniela Maria Garcia, Falco J. Bargagli-Stoffi
{"title":"CRE: An R package for interpretable discovery and\u0000inference of heterogeneous treatment effects","authors":"Riccardo Cadei, N. Khoshnevis, Kwonsang Lee, Daniela Maria Garcia, Falco J. Bargagli-Stoffi","doi":"10.21105/joss.05587","DOIUrl":"https://doi.org/10.21105/joss.05587","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138996662","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
M. Jas, Ryan Thorpe, Nicholas M. Tolley, Christopher Bailey, Steven Brandt, Blake Caldwell, Huzi Cheng, Dylan Daniels, Carolina Fernandez Pujol, Mostafa Khalil, Samika Kanekar, Carmen Kohl, Orsolya Kolozsvári, Kaisu Lankinen, Kenneth Loi, Sam Neymotin, Rajat Partani, Mattan Pelah, A. Rockhill, Mohamed Sherif, Matti Hamalainen, Stephanie Jones
{"title":"HNN-core: A Python software for cellular and\u0000circuit-level interpretation of human MEG/EEG","authors":"M. Jas, Ryan Thorpe, Nicholas M. Tolley, Christopher Bailey, Steven Brandt, Blake Caldwell, Huzi Cheng, Dylan Daniels, Carolina Fernandez Pujol, Mostafa Khalil, Samika Kanekar, Carmen Kohl, Orsolya Kolozsvári, Kaisu Lankinen, Kenneth Loi, Sam Neymotin, Rajat Partani, Mattan Pelah, A. Rockhill, Mohamed Sherif, Matti Hamalainen, Stephanie Jones","doi":"10.21105/joss.05848","DOIUrl":"https://doi.org/10.21105/joss.05848","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138999832","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"PYDAQ: Data Acquisition and Experimental Analysis with\u0000Python","authors":"Samir Angelo Milani Martins","doi":"10.21105/joss.05662","DOIUrl":"https://doi.org/10.21105/joss.05662","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-12-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138974009","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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