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Reverse vaccinology: An approach to search vaccine leads of Shigella sonnei 反向疫苗学:寻找索内志贺氏菌疫苗线索的一种方法
Pub Date : 2013-07-01 DOI: 10.1016/j.jopr.2013.07.030
Yatharth Anand , Sunil Pande , Dilip Gore

Aim

To develop vaccine leads by reverse vaccinology approach for Shigella sonnei.

Materials and methods

Study screened the coding proteins of S. sonnei as vaccine targets collected from NCBI website and filtered as cell surface proteins using programs such as SignalP 4.1, TMHMM, LipoP 1.0, PsortB and BLASTP.

Observation and results

In recent years due to rapid development in genome sequencing technology vaccine development program has achieved defined specificity and success. In our study, in total 63 cell surface proteins as vaccine leads were searched which are highly conserved among genus Shigella.

Conclusion

Study successfully used reverse vaccinology in search of vaccine leads in S. sonnei.

目的利用反向疫苗学方法开发sonnei志贺氏菌疫苗先导物。材料与方法本研究从NCBI网站收集sonnei沙门氏菌作为疫苗靶点的编码蛋白进行筛选,并使用SignalP 4.1、TMHMM、LipoP 1.0、PsortB和BLASTP等程序筛选为细胞表面蛋白。观察与结果近年来,由于基因组测序技术的快速发展,疫苗开发计划取得了明确的特异性和成功。在我们的研究中,共搜索到63种作为疫苗引线的细胞表面蛋白,这些蛋白在志贺氏菌属中高度保守。结论本研究成功地应用了反向疫苗学方法寻找sonnei链球菌的疫苗线索。
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引用次数: 4
Novel validated stability-indicating UPLC method for the determination of Metoclopramide and its degradation impurities in API and pharmaceutical dosage form 稳定性指示UPLC测定原料药和制剂中甲氧氯普胺及其降解杂质的新方法
Pub Date : 2013-07-01 DOI: 10.1016/j.jopr.2013.07.004
Prathyusha Sowjanya , Palani Shanmugasundaram , Petla Naidu , Sanjeev Kumar Singamsetty

Aim

To develop a stability-indicating reversed phase ultra performance liquid chromatographic (RP-UPLC) method for the determination of related substances in Metoclopramide bulk drugs and pharmaceutical dosage form.

Method

The chromatographic separation was achieved using a Waters X-terra RP18 (150 × 4.6 mm), 3.5 μm particle size column using the gradient program with mobile phase consisting of solvent A: 30 mM monobasic sodium phosphate and 2.3 mM of pentane-1-sulphonic acid sodium salt (pH 3.0 buffer) and solvent-B (Acetonitrile). A flow rate of 1.2 mL/min and UV detector at 273 nm was used. The runtime was 18 min within which Metoclopramide and its four impurities, ACETYLMETO, ACMA, CLEE and ACME were well separated.

Results and discussion

The drug was subjected to stress conditions such as oxidative, acid & base hydrolysis, thermal and photolytic degradation. Metoclopramide was found to degrade significantly in photolytic, oxidative & thermal stress conditions and stable in acid, base, hydrolytic & humidity stress conditions. The major degradation impurities in oxidation and photolytic degradation were identified by LCMS. The degradation products were well resolved from the main peak and its impurities, thus proved the stability-indicating power of the method.

Conclusion

The developed method was validated as per ICH guidelines with respect to specificity, linearity, limit of detection, limit of quantification, accuracy, precision and robustness. The calibration curves obtained for the four impurities were linear over the range 0.062–3.040 μg/mL.

目的建立稳定指示反相超高效液相色谱法(RP-UPLC)测定甲氧氯普胺原料药及制剂中有关物质的方法。方法采用Waters X-terra RP18 (150 × 4.6 mm), 3.5 μm粒径柱,梯度分离,流动相为溶剂a: 30 mm一碱磷酸钠,2.3 mm戊烷-1-磺酸钠盐(pH 3.0缓冲液)和溶剂b(乙腈)。流速为1.2 mL/min,紫外检测器波长为273 nm。运行时间为18 min,甲氧氯普胺及其4种杂质ACETYLMETO、ACMA、CLEE和ACME分离效果良好。结果与讨论该药物经受氧化、酸、酸等应激条件;碱水解,热和光解降解。发现甲氧氯普胺在光解、氧化和氧化中降解显著;在酸、碱、水解等热应力条件下稳定;湿度压力条件。利用LCMS对氧化和光解降解中的主要降解杂质进行了鉴定。降解产物较好地从主峰及其杂质中分离出来,证明了该方法的稳定性指示能力。结论该方法在特异性、线性度、检出限、定量限、准确度、精密度、鲁棒性等方面均符合ICH标准。4种杂质在0.062 ~ 3.040 μg/mL范围内均呈线性关系。
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引用次数: 3
Identification and characterization of foodborne pathogen Listeria monocytogenes strain Pyde1 and Pyde2 using 16S rRNA gene sequencing 食源性致病菌单核增生李斯特菌Pyde1和Pyde2的16S rRNA基因测序及鉴定
Pub Date : 2013-07-01 DOI: 10.1016/j.jopr.2013.07.009
Acharya Nagarjun Pyde , P. Nagaraja Rao , Aditya Jain , Divya Soni , Shailesh Saket , Sheaza Ahmed , Sugunakar Vuree , Anuraj Nayarisseri

Aim

Listeria monocytogenes acts as a pathogen for humans and animals, mainly causing, neonatal sepsis, abortions in pregnant females and severe infections such as septicemia and meningoencephalitis in susceptible hosts. Current study was aimed to identify novel strains of L. monocytogenes from retail chicken, beef meat and seafood samples.

Methods

In order to identify the strain, extraction and amplification of genomic DNA, 16S rRNA sequence analysis was carried out. Phylogenetic trees were constructed using dnapars and dnaml available in Phylip. The secondary structures of 16S rRNA gene sequence were predicted using UNAFOLD, a Linux based software.

Results

The results obtained were found to be a novel foodborne pathogens, which was further named L. monocytogenes strain Pyde1 and L. monocytogenes strain Pyde2, after characterization the sequence of isolate was deposited in GenBank with accession numbers ‘KC852899’ and ‘KC852900’ respectively. The Gibb's free energy of the secondary structures of L. monocytogenes strain Pyde1 and Pyde2 were −275.60 and −282.20 kcal/mol seems to be more stable in the present investigation.

Conclusion

The described results of phylogenetic distinctiveness and phenotypic disparities indicate that strain 2b represents a novel strain of foodborne pathogens within L. monocytogenes species, for which the name L. monocytogenes strain Pyde1 and L. monocytogenes strain Pyde2 is proposed.

单核增生李斯特菌是人类和动物的病原体,主要引起新生儿败血症、孕妇流产和易感宿主败血症、脑膜脑炎等严重感染。本研究旨在从零售鸡肉、牛肉和海鲜样品中鉴定新的单核细胞增生乳杆菌菌株。方法为鉴定菌株,提取基因组DNA并扩增,进行16S rRNA序列分析。利用philip中提供的dnapars和dnaml构建了系统发育树。采用基于Linux的UNAFOLD软件预测16S rRNA基因序列的二级结构。结果鉴定结果为一种新型食源性病原菌,并将其命名为单核增生乳杆菌Pyde1菌株和单核增生乳杆菌Pyde2菌株,经鉴定后,分离物序列已存入GenBank,登录号分别为KC852899和KC852900。单核增生乳杆菌Pyde1和Pyde2二级结构的吉布自由能分别为−275.60和−282.20 kcal/mol,在本研究中较为稳定。结论系统发育差异和表型差异表明菌株2b是单核增生乳杆菌种内的一种新型食源性致病菌,建议将其命名为单核增生乳杆菌Pyde1和Pyde2。
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引用次数: 8
In vitro and in vivo antiproliferative potential of Cuscuta reflexa Roxb. 山茱萸体外和体内抗增殖潜能的研究。
Pub Date : 2013-07-01 DOI: 10.1016/j.jopr.2013.06.005
Madhulika Bhagat , Jatinder Singh Arora , Ajit Kumar Saxena

Background

Cuscuta reflexa Roxb., (Convolvulaceae), is well known medicinal plant in Indian System of Medicine for various ailments. We have explored antiproliferative properties of Cuscuta reflexa (whole plant).

Methods

Three extracts (95% alcoholic, 50% hydro-alcoholic and aqueous) and four fractions (n-hexane, chloroform, n-butanol and aqueous) were prepared. In vitro cytotoxicity was observed by using SRB assay and in vivo antitumor activity was also performed using murine models.

Results

The alcoholic extract and its chloroform fraction were found to be most potent among three extracts and four fractions of alcoholic extract. It showed maximum cytotoxicity against human breast (MCF-7) cancer cell lines. The alcoholic extract showed significant (p < 0.05) tumor growth inhibition at 40 mg/kg which were 42.62% and 25.96% for Ehrlich tumor and Sarcoma −180 solid tumor model respectively. Similarly, chloroform fraction of alcoholic extract showed significant tumor growth inhibition of 48.98% and 44.11% for Ehrlich tumor and Sarcoma-180 solid tumor model at 10 mg/kg respectively.

Conclusion

This study indicates that the cytotoxic potential of Cuscuta reflexa lies in its alcoholic extract and chloroform fraction of alcoholic extract of the whole plant due to interference in cell proliferation.

背景cuscuta反射Roxb。(旋花科),是印度医学系统中众所周知的药用植物,用于治疗各种疾病。我们对全株菟丝子的抗增殖特性进行了研究。方法制备三种提取物(95%乙醇、50%水乙醇和水)和四种馏分(正己烷、氯仿、正丁醇和水)。用SRB法观察其体外细胞毒性,用小鼠模型观察其体内抗肿瘤活性。结果在三种提取物和四种提取物中,酒精提取物及其氯仿部分的药效最强。对人乳腺(MCF-7)癌细胞具有最大的细胞毒性。酒精提取物显示显著(p <0.05), 40 mg/kg对Ehrlich瘤和Sarcoma−180实体瘤模型的抑制率分别为42.62%和25.96%。同样,酒精提取物氯仿部分对Ehrlich瘤和saroma -180实体瘤模型的生长抑制作用分别为48.98%和44.11%。结论菟丝子的细胞毒作用主要表现在其醇提物和全株醇提物的氯仿部分对细胞增殖的干扰作用。
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引用次数: 5
Antinociceptive activity of the ethanolic extract of Persicaria acuminata Sach. 荆芥醇提物的抗伤活性研究。
Pub Date : 2013-07-01 DOI: 10.1016/j.jopr.2013.07.005
Md. Saifuzzaman , Md. Sarowar Jahan Shamim , Kamanashis Mahaldar , Eunus Sheemul Ali , Md. Amirul Islam

Background

Persicaria acuminata Sach. (Family – Polygonaceae) commonly known as Bishkathali is a Bangladeshi native plant which is traditionally used in painful conditions.

Objective

The aim of the present study was to evaluate antinociceptive effect of the plant and to prove the scientific basis of traditional use.

Methods

The ethanolic extracts of leaf and stem of the plant were investigated using acetic acid induced writhing method on animal model.

Results

Oral administration of both leaf and stem extracts at the doses of 250 and 500 mg/kg body weight showed significant and dose-dependent inhibition of writhing response.

Conclusion

The study signifies the antinociceptive activity of the plant and supports its popular folkloric use in the management of pain.

背景:桃金体会。(科-蓼科)通常被称为比什卡塔利是一种孟加拉国本土植物,传统上用于痛苦的条件。目的评价该植物的抗伤性作用,为其传统应用提供科学依据。方法采用醋酸扭体法对植物叶和茎的乙醇提取物进行动物模型研究。结果叶提取物和茎提取物分别以250和500 mg/kg体重给药,均能显著抑制扭体反应,且呈剂量依赖性。结论该研究表明了该植物的抗伤害活性,并支持了其在治疗疼痛方面的流行民间应用。
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引用次数: 2
Synthesis and pharmacological evaluation of some new dibenzo [b, f] [1, 4]thiazepines 几种新型二苯并[b, f][1,4]噻唑类药物的合成及药理评价
Pub Date : 2013-07-01 DOI: 10.1016/j.jopr.2013.07.011
Sarita Pawar , Akhilesh Roy , Sanjay Wagh

Aim

In the present study ten dibenzothiazepines with a methylene bridge between tricyclic nucleus and the substituent at C-11 were synthesized in order to investigate their antipsychotic activity. Some of the derivatives showed significant activity.

Methods

The title compounds were synthesized by condensation of 11-piperazinyl-dibenzothiazepine with the substituted benzyl halides in presence of triethylamine and 1,4-dioxane. The structures of the derivatives were elucidated by spectral analysis. The antipsychotic activity of the synthesized derivatives was evaluated using haloperidol induced catalepsy and lithium induced head twitches.

Results

In SSP-9 treated group, maximum catalepsy was noted 30 min after haloperidol. Lithium induced 40.2 ± 1.655 head twitches in 1 h. Clozapine (5 mg per kg) and SSP-9 (5 mg per kg) reduced the number of head twitches to 10 ± 0.7071 and 14.8 ± 0.8602, respectively.

Conclusion

The results demonstrated that the derivative SSP-9 possesses significant in vitro antipsychotic activity when compared with standard clozapine. Therefore, compound SSP-9 prototype could be considered as novel antipsychotic agent for further developing new atypical antipsychotics.

目的合成了10种在三环核和C-11取代基之间有亚甲基桥的二苯并噻唑类药物,研究其抗精神病活性。其中一些衍生品表现出显著的活性。方法在三乙胺和1,4-二恶烷的存在下,将11-哌嗪基二苯并噻唑与取代的苄基卤化物缩合合成上述化合物。通过光谱分析对衍生物的结构进行了表征。合成衍生物的抗精神病活性通过氟哌啶醇诱导的猝厥和锂诱导的头抽搐来评估。结果SSP-9治疗组在氟哌啶醇治疗30 min后出现最大程度的麻痹。锂在1 h内诱发40.2±1.655次头抽搐,氯氮平(5 mg / kg)和SSP-9 (5 mg / kg)分别使头抽搐次数减少至10±0.7071次和14.8±0.8602次。结论与标准氯氮平相比,SSP-9衍生物具有明显的体外抗精神病活性。因此,复方SSP-9原型可作为进一步开发新型非典型抗精神病药物的新型抗精神病药物。
{"title":"Synthesis and pharmacological evaluation of some new dibenzo [b, f] [1, 4]thiazepines","authors":"Sarita Pawar ,&nbsp;Akhilesh Roy ,&nbsp;Sanjay Wagh","doi":"10.1016/j.jopr.2013.07.011","DOIUrl":"10.1016/j.jopr.2013.07.011","url":null,"abstract":"<div><h3>Aim</h3><p>In the present study ten dibenzothiazepines with a methylene bridge between tricyclic nucleus and the substituent at C-11 were synthesized in order to investigate their antipsychotic activity. Some of the derivatives showed significant activity.</p></div><div><h3>Methods</h3><p>The title compounds were synthesized by condensation of 11-piperazinyl-dibenzothiazepine with the substituted benzyl halides in presence of triethylamine and 1,4-dioxane. The structures of the derivatives were elucidated by spectral analysis. The antipsychotic activity of the synthesized derivatives was evaluated using haloperidol induced catalepsy and lithium induced head twitches.</p></div><div><h3>Results</h3><p>In SSP-9 treated group, maximum catalepsy was noted 30 min after haloperidol. Lithium induced 40.2 ± 1.655 head twitches in 1 h. Clozapine (5 mg per kg) and SSP-9 (5 mg per kg) reduced the number of head twitches to 10 ± 0.7071 and 14.8 ± 0.8602, respectively.</p></div><div><h3>Conclusion</h3><p>The results demonstrated that the derivative SSP-9 possesses significant in vitro antipsychotic activity when compared with standard clozapine. Therefore, compound SSP-9 prototype could be considered as novel antipsychotic agent for further developing new atypical antipsychotics.</p></div>","PeriodicalId":16787,"journal":{"name":"Journal of Pharmacy Research","volume":"6 7","pages":"Pages 756-760"},"PeriodicalIF":0.0,"publicationDate":"2013-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.jopr.2013.07.011","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"87720282","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Acute oral toxicity studies of the standardized methanolic extract of Phyllanthus amarus Schum & Thonn 毛茛标准化甲醇提取物的急性口服毒性研究
Pub Date : 2013-07-01 DOI: 10.1016/j.jopr.2013.04.020
S.K. Kushwaha , A. Dashora , N. Dashora , J.R. Patel , M.L. Kori

Objectives

To determine the acute toxicity of standardized methanolic extract of Phyllanthus amarus in vivo in female albino rats.

Methods

Treated group of animals were administrated 300, 600, 2000 and 5000 mg/kg body weight of extract orally and the control group received standard laboratory diet and water ad libitum following OECD guideline 423 with some modifications. All animals were sacrificed after 14 days of treatment.

Results

The extract was standardized by HPLC to contain phyllanthin and hypophyllanthin. No mortality was noted and the study exhibited no significant changes in general behavior, body weight, gross appearance of internal organs, hematological and biochemical parameters and the histological profile of liver also indicated the nontoxic nature of this drug. Biochemical studies showed no significant change in the levels of ALT, AST, albumin, triglycerides, cholesterol and albumin. There were no evidence found about congestion of sinusoids, hemorrhage, hepatocytes, fatty changes, centrilobular necrosis and the changes in number of Kupffer cells in the liver. There was no increase of blood pressure and does not induce any nephrotoxicity and acute severe hepatotoxicity.

Conclusion

The present study provides pivotal evidences for ascertaining the safety of the standardized MEPA (LD50 > 5000 mg/kg) that could be used as tonic or food supplement in folklore medicine.

目的研究白化病雌性大鼠的急性体内毒性。方法治疗组分别口服300、600、2000和5000 mg/kg体重的提取物,对照组按照OECD指南423进行修改,给予标准实验室饲料和水。治疗14天后,所有动物均被处死。结果经高效液相色谱法鉴定,提取物中含有叶黄素和茶黄素。没有死亡记录,研究显示一般行为、体重、内脏器官大体外观、血液学和生化参数以及肝脏组织学特征没有显著变化,也表明该药物无毒。生化研究显示ALT、AST、白蛋白、甘油三酯、胆固醇和白蛋白水平无明显变化。未见肝窦充血、出血、肝细胞、脂肪改变、小叶中心坏死及肝内库普弗细胞数目改变。血压未升高,未引起肾毒性和急性严重肝毒性。结论本研究为确定标准化MEPA (LD50 >5000 mg/kg),可作为民间医学的滋补品或食品补充剂。
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引用次数: 12
Cytotoxic and antioxidant activities of marine sponge diversity at Pecaron Bay Pasir Putih Situbondo East Java, Indonesia 东爪哇Pecaron湾Pasir Putih sitbondo海域海绵多样性的细胞毒性和抗氧化活性
Pub Date : 2013-07-01 DOI: 10.1016/j.jopr.2013.07.001
Syamsudin Abdillah , Awik Puji Dyah Nurhayati , Sri Nurhatika , Edwin Setiawan , Wan Lelly Heffen

Objective

A study on the cytotoxic and antioxidant activities of Sponges collected from Pecaron Bay Pasir Putih Situbondo was conducted. This study aimed at screening the hydro-ethanolic extracts of 7 sponge species: Callyspongia sp, Acanthella sp and Xestospongia sp colleted at the Pecaron Situbondo, East Java, Indonesia for antiproliferative and antioxidant activities.

Methods

After collection, the species were immediately immersed in ethanol and stored at low temperatures (−20 °C) until use. Cytotoxic assay was conducted using MTT methods for some cancerous cells, including T47D, Casky and HT-29 meanwhile antioxidant assay was conducted using DPPH method.

Results

the extracts from species A. suberitoides has the highest toxicity compare to another species which valued level on tumor cell lines (HT-29, T47D and Casky). Antioxidant assay using DPPH method found that only Aaptos suberitoides that had been identified to show strong activity due to IC50 value of <30 μg/mL; meanwhile Fascaplysinopsis reticulata, Acanthella sp, Petrosia contignata and Xestospongia exigua showed moderate antioxidant activity with a IC50 < 100 μg/mL. Xestospongia sp, Callyspongia sp showed a value of IC50 > 100 μg/mL.

Conclusion

The study showed that Xestospongia sp, Fascaplysinopsis reticulata, Callyspongia sp, Petrosia contignata, Aaptos suberitoides were highly potential to develop for isolation of bioactive compounds as anticancer and antioxidant agents.

目的研究Pecaron Bay Pasir Putih sitbondo海绵体的细胞毒和抗氧化活性。本研究旨在对采自印度尼西亚东爪哇Pecaron sitbondo的7种海绵(Callyspongia sp、Acanthella sp和Xestospongia sp)的水乙醇提取物进行抗增殖和抗氧化活性筛选。方法采集后立即用乙醇浸泡,低温保存(- 20℃)备用。采用MTT法对部分癌细胞T47D、Casky、HT-29进行细胞毒试验,同时采用DPPH法进行抗氧化试验。结果对肿瘤细胞株(HT-29、T47D和Casky)的毒性最高。采用DPPH法进行抗氧化实验,发现只有经鉴定的亚种Aaptos具有较强的抗氧化活性,IC50值为30 μg/mL;网状Fascaplysinopsis reticulata、棘皮藻(Acanthella sp .)、木犀草(Petrosia congnata)和木犀草(Xestospongia exigua)的抗氧化活性中等,IC50 +;100μg / mL。Xestospongia sp, Callyspongia sp的IC50 >值;100μg / mL。结论研究表明,海绒菌属(Xestospongia sp)、网状筋膜鞘菌属(Fascaplysinopsis reticulata)、粘海绵菌属(Callyspongia sp)、褐藻属(Petrosia congnata)、亚亚绒螯虾属(Aaptos sub亚亚绒螯虾属)具有很强的抗癌和抗氧化活性化合物开发潜力。
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引用次数: 24
Interpretation of consumer's perception on readability of Consumer Medical Information Leaflets on obesity and lipid lowering drugs with standard methods 用标准方法解读消费者对减肥药降脂药《消费者医疗信息手册》可读性的认知
Pub Date : 2013-07-01 DOI: 10.1016/j.jopr.2013.07.024
Elizabeth M. Mathew , Kingston Rajiah , Krishana Kumar Sharma

Aim

Printed education materials are often used to augment healthcare professional's verbal information to consumers so it serves as an important component of symptom management. They also enhance the teaching process and can be used by consumers as a home reference. This study was aimed to interpret consumers' perception on Consumer Medical Information Leaflets (CMILs) on obesity and lipid lowering drugs, according to the standard formulae such as Flesch Reading Ease (FRE), Flesch–Kincaid Grade Level (FK-GL).

Method

The study was conducted over a period of 3 years in community pharmacy settings in Tamil Nadu, India. CMILs were interpreted by using the formulae such as Flesch Reading Ease (FRE) and Flesch–Kincaid Grade Level (FK-GL). Among the 1800 consumers, 300 consumers were excluded from the study due to lack of interest.

Results

Data revealed the consumer's perception on readability of Consumer Medical Information Leaflets on obesity and lipid lowering drugs based consumers rating.

Conclusions

Pharmaceutical companies (leaflets providers) are not taking the reading level of consumers into consideration which may not achieve the intended purpose. There is a need for developing CMILs having good readability score according to Indian set up.

目的打印的教育材料通常用于增加医疗保健专业人员的口头信息给消费者,因此它是症状管理的重要组成部分。它们还可以提高教学过程,并可被消费者用作家庭参考。本研究旨在以Flesch Reading Ease (FRE)、Flesch - kincaid Grade Level (FK-GL)等标准配方,解读消费者对《消费者医疗信息手册》(CMILs)中减肥降脂药物的认知。方法在印度泰米尔纳德邦的社区药房进行为期3年的研究。使用Flesch Reading Ease (FRE)和Flesch - kincaid Grade Level (FK-GL)等公式解释cmil。在1800名消费者中,有300名消费者因缺乏兴趣而被排除在研究之外。结果数据揭示了消费者对减肥药、降脂药《消费者医疗信息手册》可读性的认知。结论制药公司(宣传单提供者)没有考虑到消费者的阅读水平,可能达不到预期目的。根据印度的设置,有必要开发具有良好可读性评分的cmil。
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引用次数: 4
Molecular modelling studies of Histone Deacetylase inhibitors as anticancer agents 组蛋白去乙酰化酶抑制剂抗癌作用的分子模拟研究
Pub Date : 2013-07-01 DOI: 10.1016/j.jopr.2013.07.017
Sibi Narayanan , D. Velmurugan

Background

Cancer causes death to over 7.6 million people every year. The disease can be classified as cells' uncontrolled division. This uncontrolled division of cells or uncontrolled growth is caused by DNA damage. This eventually results in genes mutations, which encodes cell division controlling proteins. Histone deacetylase (HDAC) is one among the principal targets for the anticancer drugs.

Methods

Molecular docking studies of nearly 60 Trichostatin A, SuberoylAnilide Hydroxamic Acid and Sulfonamide anilides which show good inhibitory activity against HDAC were carried out using GLIDE program of Schrödinger Suite 2009. Comparison of docking scores of the compounds with their respective QSAR IC50 have also been made.

Results

From Trichostatin A and SuberoylAnilide Hydroxamic Acid analogues binding results, it was found that HDAC conformational changes are based on the ligand binding. C/N/O atoms present in the aliphatic chains of the analogues interacted well with the Zn2+ metal ion and active site amino acid residues to disrupt the enzymatic activity of target protein HDAC.

Conclusion

Analogue inhibition taken into study with the target protein HDAC assures to be an advantageous therapeutic approach in cancer treatment.

癌症每年导致超过760万人死亡。这种疾病可归类为细胞不受控制的分裂。这种不受控制的细胞分裂或不受控制的生长是由DNA损伤引起的。这最终导致基因突变,从而编码控制细胞分裂的蛋白质。组蛋白去乙酰化酶(HDAC)是抗癌药物的主要靶点之一。方法利用Schrödinger Suite 2009的GLIDE软件对近60种对HDAC具有良好抑制活性的曲古霉素A、亚羟肟酸和磺胺类苯胺进行分子对接研究。并将化合物的对接分数与其QSAR IC50进行了比较。结果从曲古霉素A与亚羟肟酸类似物的结合结果中发现,HDAC的构象变化是以配体结合为基础的。类似物的脂肪链上的C/N/O原子与Zn2+金属离子和活性位点氨基酸残基相互作用良好,破坏靶蛋白HDAC的酶活性。结论利用靶蛋白HDAC进行类似物抑制研究,有望成为治疗肿瘤的有效途径。
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引用次数: 0
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Journal of Pharmacy Research
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