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Assessment of Hemileia vastatrix resistance in chemically mutagenized Coffea arabica L. leaf discs and the emergence of a novel resistance scale 评估化学诱变阿拉伯咖啡(Coffea arabica L.)叶片对 Hemileia vastatrix 的抗性以及新抗性尺度的出现
IF 2.2 4区 农林科学 Q2 PLANT SCIENCES Pub Date : 2024-06-10 DOI: 10.1007/s42161-024-01620-4
José Andrés Rojas-Chacón, Fabián Echeverría-Beirute, Bradley J. Till, Andrés Gatica-Arias

Coffee leaf rust (CLR), caused by Hemileia vastatrix Berk. and Br, stands as a globally significant disease responsible for diminishing the grain yield and quality of Coffea arabica L. As such, the need arises for a practical and dependable method to quantify CLR disease severity and propose effective management strategies. The creation of a diagrammatic scale, featuring color photographs, proves instrumental in enhancing severity assessment and disease estimation. Mutagenesis serves as a potent tool for improving crop traits, notably resistance to pests and diseases, by inducing genetic variability, thus fostering phenotypic diversity. The primary objective of this study was to craft a novel diagrammatic scale for leaf discs, designed to gauge the severity of coffee leaf rust in C. arabica L. cv. Catuaí plants treated with sodium azide (NaN3) and ethyl methane sulfonate (EMS). The assessment encompassed a thorough examination of incidence, severity, incubation period, and latency in plant leaf discs inoculated with CLR isolates, all carried out under rigorously controlled laboratory conditions. The scale’s construction hinged on the frequency distribution of severity and Weber-Fechner’s visual stimulus law, which facilitated the determination of minimum and maximum limits, as well as intermediary levels. The resulting scale comprises seven distinct levels spanning a range from 0 to 52.15% of the afflicted leaf area. Employing conglomerate analysis (Wilks, p < 0.0001) unveiled four groups of progenies exhibiting significantly different (p < 0.05) resistance responses to CLR. Notably, Plant E154 displayed an incidence rate of merely 0.3% for CLR, while the remaining plants, including A123, E6, E64, A127, CES5, A107, A93, E29, E116, and A101, showcased an incidence rate of less than 10%. In conclusion, this scale represents a suitable, valuable, and dependable tool for visually estimating CLR severity in coffee leaf discs.

由 Hemileia vastatrix Berk. 和 Br.引起的咖啡叶锈病(CLR)是一种全球性的重大病害,会降低阿拉伯咖啡(Coffea arabica L.)的谷物产量和质量。因此,需要一种实用可靠的方法来量化 CLR 病害的严重程度,并提出有效的管理策略。事实证明,以彩色照片为特色的图解标度有助于加强严重程度评估和病害估计。诱变是一种有效的工具,可通过诱导遗传变异来改善作物性状,特别是抗病虫害能力,从而促进表型多样性。本研究的主要目的是为叶盘设计一种新的图解标度,用于衡量用叠氮化钠(NaN3)和甲烷磺酸乙酯(EMS)处理过的 C. arabica L. cv. Catuaí 植物的咖啡叶锈病严重程度。评估包括对接种了 CLR 分离物的植物叶盘的发病率、严重程度、潜伏期和潜伏期进行全面检查,所有这些都是在严格控制的实验室条件下进行的。量表的构建基于严重程度的频率分布和韦伯-费希纳视觉刺激定律,这有助于确定最低和最高限度以及中间等级。由此得出的量表包括七个不同的等级,范围从 0 到 52.15%的受害叶面积。通过综合分析(Wilks,p < 0.0001)发现,有四组后代对 CLR 的抗性反应有显著差异(p < 0.05)。值得注意的是,植株 E154 的 CLR 发生率仅为 0.3%,而其余植株(包括 A123、E6、E64、A127、CES5、A107、A93、E29、E116 和 A101)的发生率均低于 10%。总之,该量表是直观估计咖啡叶盘 CLR 严重程度的合适、有价值且可靠的工具。
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引用次数: 0
Response of durum wheat vs. bread wheat to Fusarium foot and root rot under semi-arid conditions 硬粒小麦与面包小麦在半干旱条件下对镰刀菌根茎腐病的反应
IF 2.2 4区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2024-06-04 DOI: 10.1007/s42161-024-01659-3
Samira Chekali, Sourour Ayed, Eya Khemir, Mohamed Saleh Gharbi, Salem Marzougui, Timothy Paulitz, Samia Gargouri

Fusarium foot and root rot is one of the most important soilborne diseases of cereals, specifically on durum wheat which is the main cultivated species in the Mediterranean regions. This work aimed to evaluate the response of durum wheat and bread wheat to this disease under different climatic conditions. The disease parameters, grain yield loss as well as thousand kernel weight (TKW), heading date and height of plant were evaluated on 29 durum and bread wheat genotypes during two years. Overall, durum wheat grain yield was strongly and negatively correlated with disease parameters, heading date, and positively with plant height and TKW compared to bread wheat. In the drier year, the 24 durum wheat genotypes were more susceptible to the disease than the five bread wheat varieties while some of them showed less disease during the wetter year. Bread wheat maintained the same behavior in both years vs. durum wheat. Grain yield loss was higher on durum wheat compared to bread wheat. It was the same in both years (56 and 51%) for durum wheat and was significantly (p < 0.01) lower in the drier (24%) compared to the wetter year (44%) for bread wheat. This work confirmed the susceptibility of Tunisian durum wheat to the disease compared to bread wheat and calls attention to the potential vulnerability of this important Mediterranean food crop under a hotter, drier climate. More research is needed to investigate adaptation to drought and plant defense mechanisms and to breed for resistance to this disease.

根腐镰刀菌病是谷物最重要的土传病害之一,特别是对地中海地区主要种植品种硬粒小麦的危害。这项研究旨在评估硬粒小麦和面包小麦在不同气候条件下对这种病害的反应。在两年时间里,对 29 个硬质小麦和面包小麦基因型的病害参数、谷物产量损失以及千粒重(TKW)、抽穗期和株高进行了评估。总体而言,与面包小麦相比,硬粒小麦的谷物产量与病害参数和打顶日期呈负相关,与株高和千粒重呈正相关。在较干旱的年份,24 个硬粒小麦基因型比 5 个面包小麦品种更易感染病害,而在较潮湿的年份,其中一些基因型的病害较轻。面包小麦与硬质小麦在这两年的表现相同。硬质小麦的谷物产量损失高于面包小麦。硬质小麦在这两年的减产率相同(分别为 56% 和 51%),面包小麦在较干旱年份的减产率(24%)显著低于较潮湿年份的减产率(44%)(p < 0.01)。这项研究证实,与面包小麦相比,突尼斯硬粒小麦更容易感染这种疾病,并提醒人们注意这种重要的地中海粮食作物在更炎热、更干燥的气候条件下的潜在脆弱性。需要进行更多的研究,以调查对干旱的适应性和植物防御机制,并培育抗这种疾病的品种。
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引用次数: 0
Fire4CAST – a new integrative epidemiological forecasting model for the accurate prediction of infection risk and effective control of fire blight in Pyrus orchards Fire4CAST - 一种新的综合流行病学预测模型,用于准确预测刺柏果园的感染风险和有效控制火疫病
IF 2.2 4区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2024-06-03 DOI: 10.1007/s42161-024-01622-2
Daniel McGuire, Francisco Pinto, Telma Costa, Joana Cruz, Rui Sousa, Miguel Leão de Sousa, Carmo Martins, Margarida Gama-Carvalho, Ana Tenreiro, Rogério Tenreiro, Leonor Cruz

Fire blight disease, caused by Erwinia amylovora is present worldwide and affects over 40 countries in Europe where it is listed as a quarantine or regulated pest often due to ineffective control strategies maladapted to the respective production systems. In Portugal, the disease was confirmed in 2010 and the occurrence of disease outbreaks in new production areas has risen over the years. The disease affects the national production of apple and pear fruits, with greater impact on the national pear variety ‘Rocha’, widely exported to European countries and Brazil. The mild temperatures and high relative humidity promote the progression of the disease during winter, revealing the potential activity of the bacterium in the latency period (LP) of the host. Infection alert risk using the established predictive models Maryblight TM, Cougarblight and BIS98 was put in place in 2013 by Centro Operativo e Tecnológico Hortofrutícola Nacional (COTHN). These attempts to control the spread of this disease, showed low accuracy for the Portuguese epidemiological reality. Within the framework of project Fire4CAST we developed a new epidemiological model to predict fire blight disease using a systems biology approach integrating microbiological, cytological and genomic pathogen data with phenological host development and climatic variables. The presence of E. amylovora was monitored in orchards with fire blight history using standard laboratory tests. Simultaneously, the implementation of immune-flow cytometry (IFCM) highlighted the viability of E. amylovora populations prevailing during winter and early spring, long before bloom risk period. The integration of the whole data set allowed the development of the Fire4CAST predictive model, able to monitor the expected infection date (EID) and to define accurate outbreak alarms. Fire4CAST model enabled the detection of outbreak risk during winter based on rules that consider climatic data variables, which were validated by effective presence of live and active E. amylovora populations and real-time quantitative PCR (qPCR) data, accomplishing a precision rate of 83%. Field application of Fire4CAST can hopefully guide the implementation of successful control strategies, leading to more sustainable pome chain production areas.

由 Erwinia amylovora 引起的火疫病遍布全球,影响到欧洲 40 多个国家,在这些国家,火疫病被列为检疫性或受管制的害虫,这通常是由于不适应各自生产系统的无效控制策略造成的。葡萄牙于 2010 年确认了该病害,而且近年来在新产区爆发该病害的情况不断增多。该病害影响到全国的苹果和梨果生产,对广泛出口到欧洲国家和巴西的国家梨品种 "Rocha "的影响更大。冬季温和的气温和较高的相对湿度促进了病害的发展,揭示了细菌在寄主潜伏期(LP)的潜在活动。2013 年,Centro Operativo e Tecnológico Hortofrutícola Nacional(COTHN)利用已建立的预测模型 Maryblight TM、Cougarblight 和 BIS98 发布了感染风险警报。根据葡萄牙的流行病学现状,这些控制该疾病传播的尝试准确性较低。在 "Fire4CAST "项目框架内,我们开发了一种新的流行病学模型,利用系统生物学方法将微生物学、细胞学和基因组病原体数据与物候宿主发展和气候变量结合起来,预测火疫病。通过标准的实验室测试,监测了曾发生过火疫病的果园中 E. amylovora 的存在情况。与此同时,免疫流式细胞仪(IFCM)的应用突出显示了早在开花风险期之前的冬季和早春 E. amylovora 种群的生存能力。通过整合整个数据集,开发出了 Fire4CAST 预测模型,该模型能够监测预期感染日期(EID)并确定准确的疫情警报。Fire4CAST 模型能够根据考虑气候数据变量的规则检测冬季的疫情爆发风险,并通过有效存在的活的和活跃的 E. amylovora 种群和实时定量 PCR(qPCR)数据进行验证,精确率达到 83%。Fire4CAST 的实地应用有望指导控制策略的成功实施,从而提高果核链生产地区的可持续发展能力。
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引用次数: 0
Pyricularia pennisetigena as leaf blast disease-causing pathogen in king grass (Pennisetum sinese) and its assessment of the pathogenic risk 作为草王叶瘟致病菌的 Pyricularia pennisetigena 及其致病风险评估
IF 2.2 4区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2024-05-24 DOI: 10.1007/s42161-024-01654-8
Yinglong Liu, Tengfei Gui, Ayesha Ahmed, Shahzad Munir, Pengfei He, Pengbo He, Yixin Wu, Ping Tang, Qiong Luo, Yueqiu He

King grass (Pennisetum sinese), also known as sugar cane grass, is being affected by emerging leaf blast pathogen which is responsible for causing foliar disease in Baoshan City, Yunnan Province, China. The pathogen was isolated from the typical infected plants showing symptoms like eye-shaped and whitish color in the center with brown-black necrotic borders surrounded by a yellow halo sample on potato dextrose agar (PDA) media. The leaves of various plants including maize (Zea mays), hybrid rice (Oryza sativa), and wheat (Triticum aestivum), were inoculated with the pathogen in an in vitro assay to evaluate the infection potential of the pathogen and transmission risk. Our study verified that Psp1 is pathogenic to the king grass leaves and it is considered as the main causal agent of leaf blast in the study area. Further, morphological characterization and molecular analysis based on ITS region and LSU gene confirmed the pathogen as Pyricularia pennisetigena. During pathogenicity assay, both Psp1 and LP11 isolates of a rice blast pathogen induced symptoms of varying severity in a total of different nine plants. Among these, the pathogen Psp1 exhibited significant symptoms, including conidial emergence on king grass leaves (Pennisetum alopecuroides and Pe. flaccidum) indicating high pathogenicity to these plants. This suggests that Psp1 pose a considerable a high pathogenic risk to Pennisetum spp. This work lays a groundwork for future implementation of integrated management strategies for leaf blast in local king grass, offering a theoretical basis and research foundation for such endeavor.

蔗王草(Pennisetum sinese)又名甘蔗草,在中国云南省保山市受到新出现的叶瘟病原体的影响,该病原体可导致叶片病害。病原体是从马铃薯葡萄糖琼脂(PDA)培养基上的典型感染植株中分离出来的,这些植株表现出眼状症状,中心呈白色,坏死边缘呈棕黑色,周围有黄晕。在体外试验中,将病原体接种到包括玉米(Zea mays)、杂交水稻(Oryza sativa)和小麦(Triticum aestivum)在内的多种植物叶片上,以评估病原体的感染潜力和传播风险。我们的研究验证了 Psp1 对禾本科植物叶片的致病性,并认为它是研究地区叶瘟的主要病原体。此外,形态特征和基于 ITS 区域和 LSU 基因的分子分析证实病原体为 Pyricularia pennisetigena。在致病性试验中,稻瘟病病原体 Psp1 和 LP11 分离物共诱发了 9 株不同程度的症状。其中,病原体 Psp1 表现出明显的症状,包括分生孢子出现在禾本科植物(Pennisetum alopecuroides 和 Pe.这项工作为今后在当地王草中实施叶瘟综合治理策略奠定了基础,提供了理论依据和研究基础。
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引用次数: 0
Zinc carbonate nanoparticles (ZnC-NPs) augmented the growth of rice seedlings by suppressing Fusarium fujikuroi and modulating Zn content in rice seedlings 纳米碳酸锌颗粒(ZnC-NPs)通过抑制镰刀菌和调节水稻秧苗中的锌含量促进水稻秧苗的生长
IF 2.2 4区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2024-05-23 DOI: 10.1007/s42161-024-01660-w
Anjali Sidhu, Priambidha Rajput, R. Ahuja, Varinder Khepar, Arsh Alam Singh Gill
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引用次数: 0
TaqMan real-time RT-PCR for detection of cowpea aphid-borne mosaic virus and epidemiological aspects of passion fruit woodiness disease TaqMan 实时 RT-PCR 检测豇豆蚜传花叶病毒和百香果木质化病的流行病学问题
IF 2.2 4区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2024-05-21 DOI: 10.1007/s42161-024-01657-5
Neemias da Silva Santos, Francis Zanini, Daniel Remor Moritz, M. P. Gonzatto, Henrique Belmonte Petry, Edson Bertolini
{"title":"TaqMan real-time RT-PCR for detection of cowpea aphid-borne mosaic virus and epidemiological aspects of passion fruit woodiness disease","authors":"Neemias da Silva Santos, Francis Zanini, Daniel Remor Moritz, M. P. Gonzatto, Henrique Belmonte Petry, Edson Bertolini","doi":"10.1007/s42161-024-01657-5","DOIUrl":"https://doi.org/10.1007/s42161-024-01657-5","url":null,"abstract":"","PeriodicalId":16837,"journal":{"name":"Journal of Plant Pathology","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2024-05-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141117777","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification and validation of chickpea (Cicer arietinum L.) Isoflavone synthase 1 (CaIfs1) promoter conferring pathogen-induced expression 鉴定和验证鹰嘴豆(Cicer arietinum L.)异黄酮合成酶 1(CaIfs1)启动子的病原体诱导表达能力
IF 2.2 4区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2024-05-21 DOI: 10.1007/s42161-024-01646-8
Lerissa Sweety Dsilva, Shikha Dixit, Ashish Marathe, Vinay Kumar, P. N. Sivalingam, Pankaj Kaushal, Probir Kumar Ghosh
{"title":"Identification and validation of chickpea (Cicer arietinum L.) Isoflavone synthase 1 (CaIfs1) promoter conferring pathogen-induced expression","authors":"Lerissa Sweety Dsilva, Shikha Dixit, Ashish Marathe, Vinay Kumar, P. N. Sivalingam, Pankaj Kaushal, Probir Kumar Ghosh","doi":"10.1007/s42161-024-01646-8","DOIUrl":"https://doi.org/10.1007/s42161-024-01646-8","url":null,"abstract":"","PeriodicalId":16837,"journal":{"name":"Journal of Plant Pathology","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2024-05-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141115321","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
First report of ‘Candidatus Phytoplasma australasia’-related strain (16SrII–D subgroup) infecting litchi tomato (Solanum sisymbriifolium) in India 首次报告印度荔枝番茄(Solanum sisymbriifolium)感染 "澳大利亚植物原原体 "相关菌株(16SrII-D 亚群)的情况
IF 2.2 4区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2024-05-21 DOI: 10.1007/s42161-024-01655-7
S. N, Murali M., Sumashri K. S., Vandana Yadav, Amruthesh K. N., J. R.
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引用次数: 0
The intensity of coffee berry disease (Colletotrichum kahawae Waller and Bridge) and its association with biophysical factors in Southern Ethiopia 埃塞俄比亚南部咖啡浆果病(Colletotrichum kahawae Waller and Bridge)的强度及其与生物物理因素的关系
IF 2.2 4区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2024-05-09 DOI: 10.1007/s42161-024-01658-4
Ano Wariyo, Mashilla Dejene, Eshetu Derso, Zelalem Bekeko

Coffee berry disease (CBD) (caused by Colletotrichum kahawae Waller and Bridge), is the major limiting factor in coffee production and is markedly increasing, particularly in southern Ethiopia. Therefore, the current work was conducted with the objectives of (1) assessing the current status of the disease and (2) identifying major biophysical factors associated with disease intensity. Field surveys were conducted to perform disease assessments and identify major biophysical factors associated with CBD intensity across six districts from mid-July to August 2021 cropping season. The mean CBD incidence and severity ranged from 24.7 to 74.8%, and 15.7 to 53.4%, respectively. Independent variables such as districts, altitudes, and cultivar types were the most important variables that were significantly associated with the intensity of CBD in the study areas. Future research work should focus on conducting comprehensive epidemiological surveys, and the distribution of released and developing new CBD-resistant varieties to their specific agroecologies.

咖啡浆果病(CBD)(由 Colletotrichum kahawae Waller 和 Bridge 引起)是咖啡生产的主要限制因素,并且正在显著增加,尤其是在埃塞俄比亚南部。因此,当前工作的目标是:(1) 评估该疾病的现状;(2) 确定与疾病强度相关的主要生物物理因素。从 2021 年 7 月中旬到 8 月耕种季节,在六个地区进行了实地调查,以进行病害评估并确定与 CBD 强度相关的主要生物物理因素。CBD的平均发病率和严重程度分别为24.7%至74.8%和15.7%至53.4%。地区、海拔和栽培品种类型等独立变量是与研究地区 CBD 强度显著相关的最重要变量。未来的研究工作应侧重于开展全面的流行病学调查,以及根据具体的农业生态环境发布和开发抗 CBD 的新品种。
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引用次数: 0
Biology, phylogenetic and evolutionary relations of Tradescantia mild mosaic virus isolates from Hungary 匈牙利轻微花叶病毒分离物的生物学、系统发育和进化关系
IF 2.2 4区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2024-05-06 DOI: 10.1007/s42161-024-01661-9
János Ágoston, Asztéria Almási, Dóra Pinczés, Réka Sáray, Katalin Salánki, László Palkovics

In Western Transdanubia in 2018 and in Central-Hungary in 2022 spiderwort plants showed flower breaking symptoms and mild mosaic on the foliage, which indicated a potential virus infection. One gram of symptomatic leaf sample was collected at both locations. Potyvirus-specific ELISA tests demonstrated potyvirus infection. To identify the virus species, potyvirus-specific RT-PCR was carried out on the samples. In both samples specific PCR products were detected and cloned into pGEM®-T Easy vector. The nucleotide sequences of the inserts were determined by Sanger sequencing. BLASTn searches on the complete coat protein region of both isolates demonstrated more than 99.87% identity with Tradescantia mild mosaic virus (TraMMV; accession number OL584375). Koch postulates were fulfilled by sap inoculating seed grown spiderwort plants. Phylogenetic analyses of the TraMMV coat protein sequences revealed two distinct evolutionary lineages: a tropical subgroup with at least 97.84% identity within the group and temperate subgroup with at least 98.97% identity within the group. One major difference between the subgroups was in the triplet responsible for vector transmission. The isolates belonging to the tropical subgroup had DAG triplets, while the temperate subgroup had NAG triplets. The difference in the triplets could be caused by natural diversification, directional selection or disruptive selection.

License: CC BY-NC-ND

2018 年在外兴安岭西部和 2022 年在匈牙利中部,蜘蛛草植株出现了断花症状,叶片上出现了轻度马赛克,这表明可能感染了病毒。两地均采集了一克有症状的叶片样本。钾病毒特异性酶联免疫吸附试验证明感染了钾病毒。为了确定病毒的种类,对样本进行了钾病毒特异性 RT-PCR。在两个样本中都检测到了特异的 PCR 产物,并将其克隆到 pGEM®-T Easy 载体中。插入物的核苷酸序列由桑格测序法测定。对这两种分离物的完整衣壳蛋白区进行的 BLASTn 搜索表明,它们与 Tradescantia mild mosaic virus(TraMMV;登录号 OL584375)的同一性超过 99.87%。用树液接种种子生长的蛛形纲植物符合科赫假说。对 TraMMV 衣壳蛋白序列的系统进化分析表明,该病毒有两个不同的进化系:热带亚群和温带亚群,热带亚群内部至少有 97.84% 的同一性,温带亚群内部至少有 98.97% 的同一性。亚群之间的一个主要区别在于负责病媒传播的三联体。热带亚群的分离物具有 DAG 三联体,而温带亚群的分离物具有 NAG 三联体。三联体的差异可能是由自然分化、定向选择或破坏性选择造成的:CC BY-NC-ND
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引用次数: 0
期刊
Journal of Plant Pathology
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