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Enhancing Operational Efficiency of the Raman Laser Spectrometer (RLS) in the ExoMars Rosalind Franklin Mission: A Comprehensive Qualitative Analysis of Key Parameters in the Sample Acquisition and Measurement Strategies 提高罗莎琳德·富兰克林ExoMars任务中拉曼激光光谱仪(RLS)的工作效率:样品采集和测量策略关键参数的综合定性分析
IF 1.9 3区 化学 Q2 SPECTROSCOPY Pub Date : 2025-06-15 DOI: 10.1002/jrs.6849
C. P. Canora, Andoni G. Moral Inza, Laura Seoane Purriños, Jesús Zafra Iglesias, Pablo Rodríguez Pérez, Marina Benito-Parejo, J. A. Rodríguez, Rosario Canchal, Pilar Santamaría, Iván López, Antonio Molina, Jose Antonio Manrique, Marco Veneranda, Guillermo Lopez-Reyes, Olga Prieto-Ballesteros, F. Rull

The Raman Laser Spectrometer (RLS), part of the Pasteur analytical suite onboard the ExoMars 2028 Rosalind Franklin rover, is designed to perform structural and compositional analyses of powdered subsurface samples on Mars. Its fully autonomous operation within the constraints of the Pasteur Analytical Laboratory-limited by time, energy, and sample availability-requires an efficient balance between scientific performance and operational viability. This study presents a qualitative analysis of RLS operations under mission-representative conditions using the Flight Spare (FS) model, focusing on the impact of key parameters-number of accumulations, autofocus frequency, and analyzed spots per sample-on the system's detection capabilities. Experimental campaigns were conducted using ESA-selected analog samples representative of Oxia Planum geology. Performance was evaluated using both the RLS FS and the ExoMars Simulator. Results show high consistency (90-95%) in mineral detection between systems, confirming the robustness of the RLS FS under representative scenarios. The instrument demonstrated its ability to identify key phases, including oxides, silicates, carbonates, hydrated sulfates, and amorphous carbon, highlighting its relevance to geological and astrobiological investigations. Operational tests confirmed that reducing the number of accumulations or autofocus activations-under appropriate sample conditions-does not compromise spectral quality. These findings support a flexible strategy that adapts operational parameters to the scientific context, optimizing resource use and preserving long-term instrument reliability. The results will contribute to the refinement of nominal activity plans for ExoMars and reinforce the use of the RLS FS as a critical asset for validating future configurations of the flight model.

拉曼激光光谱仪(RLS)是ExoMars 2028罗莎琳德·富兰克林探测器上巴斯德分析套件的一部分,用于对火星表面下粉末样品进行结构和成分分析。在巴斯德分析实验室的限制下,其完全自主的操作-受时间,精力和样品可用性的限制-需要在科学性能和操作可行性之间取得有效的平衡。本研究使用飞行备用(FS)模型对任务代表性条件下的RLS操作进行了定性分析,重点关注关键参数(累积次数、自动对焦频率和每个样本的分析点)对系统检测能力的影响。实验活动使用欧空局选择的代表氧平原地质的模拟样品进行。使用RLS FS和ExoMars模拟器对性能进行了评估。结果表明,系统之间的矿物检测一致性较高(90-95%),验证了RLS FS在代表性场景下的鲁棒性。该仪器展示了其识别关键相的能力,包括氧化物、硅酸盐、碳酸盐、水合硫酸盐和无定形碳,突出了其与地质和天体生物学研究的相关性。操作测试证实,在适当的样品条件下,减少累积或自动对焦激活的数量不会影响光谱质量。这些发现支持一种灵活的策略,使操作参数适应科学环境,优化资源利用并保持仪器的长期可靠性。这些结果将有助于改进ExoMars的名义活动计划,并加强RLS FS作为验证未来飞行模型配置的关键资产的使用。
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引用次数: 0
Autoencoding Raman Spectra to Predict Analyte Concentrations 自动编码拉曼光谱预测分析物浓度
IF 1.9 3区 化学 Q2 SPECTROSCOPY Pub Date : 2025-06-12 DOI: 10.1002/jrs.70003
Alex Poppe, Charles Warren, William Brooks, Stuart Gibson, Michael Foster

Machine learning analysis has been applied to Raman data obtained in both nuclear and biopharmaceutical industrial applications. A 785-nm Raman instrument using a spatial heterodyne spectrometer (SHS) was used to acquire Raman spectra for the nuclear dataset, whilst a new deep UV resonant SHS system, featuring a 228.5-nm diode-pumped solid-state laser, was used to capture Raman spectra of biological macromolecule samples for the biopharmaceutical dataset. A key focus is on the practical challenges faced in the design of data processing tasks and machine learning architectures due to real-world limitations in data collection. A fully connected (FC) autoencoder is employed as part of a regression task, which generates predictions on analyte concentrations in mixed substances. The method was shown to outperform industry standard regression tools, principal component regression (PCR) and partial least squares (PLS) regression, each used as comparative benchmarks, by over 50% in a test of model precision across the nuclear and biopharmaceutical datasets investigated in this work. Advancements in the precision, speed and effectiveness of such tools are of critical importance in an industrial environment. This is driven by compelling motivations to reduce not only the costs associated with these processes but also to increase the quality of resulting products or to reduce the risks within industrial operations, where applicable.

机器学习分析已经应用于核和生物制药工业应用中获得的拉曼数据。采用785 nm空间外差光谱仪(SHS)采集核数据集的拉曼光谱,采用228.5 nm二极管泵浦固体激光器的深紫外共振SHS系统采集生物大分子样品的拉曼光谱,用于生物制药数据集。由于现实世界中数据收集的限制,一个关键的焦点是在数据处理任务和机器学习架构的设计中面临的实际挑战。全连接(FC)自动编码器被用作回归任务的一部分,它对混合物质中的分析物浓度产生预测。该方法被证明优于行业标准回归工具,主成分回归(PCR)和偏最小二乘(PLS)回归,每个回归都用作比较基准,在本工作中调查的核和生物制药数据集的模型精度测试中超过50%。这些工具在精度、速度和有效性方面的进步在工业环境中至关重要。这是由令人信服的动机驱动的,不仅要降低与这些过程相关的成本,还要提高最终产品的质量,或者在适用的情况下降低工业操作中的风险。
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引用次数: 0
Probing the Stability of Convolution Neural Networks and Support Vector Machines With Transmission Low Wavenumber Raman Spectroscopic Data 利用传输低波数拉曼光谱数据探测卷积神经网络和支持向量机的稳定性
IF 1.9 3区 化学 Q2 SPECTROSCOPY Pub Date : 2025-06-11 DOI: 10.1002/jrs.70002
Mitchell Chalmers, Keith C. Gordon, Brendan McCane, Sara J. Fraser-Miller

Convolutional neural networks (CNNs) and support vector machines (SVMs) have seen numerous applications within Raman spectroscopy. However, the age-old question remains: Which is better? To shine some light on the matter, the stability of the two machine learning techniques was probed by intentionally introducing spectral artefacts to transmission low wavenumber Raman spectroscopic data. The data consisted of synthetic microcalcifications buried under various depths of chicken breast. We found that an SVM yielded the best model with an area under curve (AUC) of 0.989 compared to 0.979 for the CNN. However, generally, SVMs were more susceptible to the spectral artefacts than CNNs. Additionally, the performance of CNNs and SVMs was not dependent on the magnitude of the shifts and stretches. An example is the linear stretches, where the AUC remained at 0.977 and 0.969 for both 2 and 5 cm−1 shifts for the CNN and SVM models, respectively.

卷积神经网络(cnn)和支持向量机(svm)在拉曼光谱中得到了广泛的应用。然而,古老的问题仍然存在:哪个更好?为了阐明这一问题,我们通过有意引入光谱伪影来传输低波数拉曼光谱数据,来探测这两种机器学习技术的稳定性。数据由埋在鸡胸肉不同深度下的合成微钙化组成。我们发现SVM产生的最佳模型曲线下面积(AUC)为0.989,而CNN的AUC为0.979。然而,一般来说,支持向量机比cnn更容易受到频谱伪影的影响。此外,cnn和svm的性能不依赖于移位和拉伸的大小。一个例子是线性拉伸,CNN和SVM模型在2 cm−1和5 cm−1的位移下,AUC分别保持在0.977和0.969。
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引用次数: 0
Spatial Variation of Cooked Temperature in Pork Measured by Spontaneous Raman Spectroscopy 自发拉曼光谱测定猪肉煮熟温度的空间变化
IF 1.9 3区 化学 Q2 SPECTROSCOPY Pub Date : 2025-06-09 DOI: 10.1002/jrs.70000
Korryn Narvaez, Eliza Ballantyne, Savannah M. Wood, Dustin W. Shipp

The food preparation industry relies on accurately measuring the endpoint temperature (EPT) of cooked pork to ensure the safety and quality of these products. Food thermometers are the current gold standard but become ineffectual as soon as the meat begins to cool. Furthermore, single-point measurements fail to capture the spatial variation of EPT in a sample. Raman spectroscopy offers a non-contact, consistent method of measuring EPT after the meat has cooled. We present two Raman classification models for predicting EPT in cooked pork. A principal component analysis-random forest (PCA-RF) model classifies spectra into temperature categories with 87.5% accuracy. A partial least squares (PLS) model predicts the EPT on a continuous scale with a root mean square (RMS) error of 3.8°C. We apply this PLS model to create hyperspectral images of the EPT in cooked tissue cross-sections. These images show that different cooking methods exhibit varying heat penetration, with expected differences in the distance from the hot outer surface over which EPT decays. This technique for imaging the EPT in cooked pork offers possibilities for further studies of the differences among various cooking methods, informing future improvements in both food safety and quality.

食品加工行业依靠准确测量熟猪肉的终点温度(EPT)来确保这些产品的安全和质量。食品温度计是目前的黄金标准,但一旦肉类开始冷却,它就失效了。此外,单点测量无法捕获样品中EPT的空间变化。拉曼光谱提供了一种非接触的、一致的方法来测量肉冷却后的EPT。我们提出了两种预测熟猪肉中EPT的拉曼分类模型。主成分分析-随机森林(PCA-RF)模型以87.5%的准确率对光谱进行温度分类。偏最小二乘(PLS)模型在连续尺度上预测EPT,均方根(RMS)误差为3.8°C。我们应用这个PLS模型在煮熟的组织截面上创建EPT的高光谱图像。这些图像显示,不同的烹饪方法表现出不同的热穿透性,与EPT衰变的热外表面距离的预期差异。这种成像熟猪肉中EPT的技术为进一步研究不同烹饪方法之间的差异提供了可能性,为未来食品安全和质量的改进提供了信息。
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引用次数: 0
Anharmonicity of Phonon Modes in MBE-Grown Bi2Te3 Thin Films: A Temperature-Dependent Raman Study mbe生长Bi2Te3薄膜中声子模式的非调和性:温度相关的拉曼研究
IF 1.9 3区 化学 Q2 SPECTROSCOPY Pub Date : 2025-06-09 DOI: 10.1002/jrs.70001
N. Kumar, A. S. Krylov, S. N. Krylova, E. U. Khamatdinov, D. V. Ishchenko, O. E. Tereshchenko

This study examines the temperature-dependent Raman spectra of MBE-grown bismuth telluride (Bi2Te3) thin films, analyzing Stokes, and anti-Stokes scattering in two polarizations to resolve symmetry-dependent mode strengths. Density functional theory simulations of Stokes spectra identified the fundamental vibrational modes and anharmonic decay. The temperature evolution of phonon wavenumbers and linewidths revealed the role of anharmonicity: the real part of the phonon self-energy governs the wavenumber shift (redshift) of the A1g2 mode, while its imaginary part drives the linewidth broadening, both arising from cubic and quartic anharmonic processes which is associated to energy and symmetry of the mode. In contrast, the lower wavenumber A1g1 and Eg2 modes exhibited weaker coupling to thermal decay channels, reflected in smaller changes to their self-energy components and longer lifetimes. The intensity of A1g2 mode decreased significantly with temperature due to multi-phonon decay, whereas A1g1 and Eg2 intensities remained stable. These results quantify the distinct mediation of wavenumber renormalization and lifetime effects in Bi2Te3 by the real and imaginary components of the phonon self-energy.

本研究研究了mbe生长的碲化铋(Bi2Te3)薄膜的温度依赖拉曼光谱,分析了两种极化下的Stokes散射和反Stokes散射,以解决对称性依赖的模式强度。密度泛函理论模拟Stokes谱,确定了基本振动模式和非调和衰减。声子的波数和线宽的温度演化揭示了非调和性的作用:声子自能的实部控制着a1g2模式的波数位移(红移),而其虚部驱动着线宽的展宽,这两个过程都是由与模式的能量和对称性有关的三次和四次非调和过程引起的。相比之下,低波数的a1g1和e2模式与热衰减通道的耦合较弱,反映在它们的自能分量变化较小,寿命更长。由于多声子衰减,a1g 2模强度随温度的升高而显著降低,而a1g 1和e2g模强度保持稳定。这些结果量化了声子自能的实分量和虚分量对Bi2Te3中波数重整化和寿命效应的独特中介作用。
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引用次数: 0
Machine Learning of Raman Spectroscopic Data: Comparison of Different Validation Strategies 拉曼光谱数据的机器学习:不同验证策略的比较
IF 1.9 3区 化学 Q2 SPECTROSCOPY Pub Date : 2025-06-04 DOI: 10.1002/jrs.6842
David Lilek, Daniel Zimmermann, Lukas Steininger, Maurizio Musso, Bodo D. Wilts, Sonja Gamsjaeger, Daniel-Ralph Hermann, Christoph Wiesner, Agnes Grünfelder, Birgit Herbinger, Katerina Prohaska

Machine learning (ML) techniques are valuable for analyzing complex biological SERS spectra, allowing for the detection of minor differences in cell composition. However, several challenges arise in the data analysis process, such as selecting the appropriate preprocessing methods, machine learning algorithms, and validation strategies to avoid under/overfitting and ensure reliable estimates. This study systematically compared various validation strategies and their impact on multiple ML classifiers using four biological datasets of varying complexities, in terms of class overlap, and sample variability.

Therefore, a machine learning workflow was established, incorporating more than 10 classifiers and using nested cross-validation (CV) for hyperparameter tuning and performance estimation. Five CV strategies were compared: Leave-One-Group-Out, stratified K-Fold, unstratified K-Fold, Leave-One-Out, and nested CV.

Our results demonstrate that stratified K-Fold CV yielded performance nearly equivalent to nested CV in terms of accuracy and efficiency but with a reduced computational cost. Leave-One-Group-Out strategy produced lower performance estimates than the other four methods, which may be more representative of real-world performance.

Conclusively, this work shows that simpler CV strategies can effectively replace computationally expensive nested CV in certain cases, while maintaining comparable performance. Nonetheless, careful consideration of overfitting remains crucial when employing these more efficient methods.

机器学习(ML)技术对于分析复杂的生物SERS光谱很有价值,允许检测细胞组成的微小差异。然而,在数据分析过程中出现了一些挑战,例如选择适当的预处理方法,机器学习算法和验证策略,以避免过拟合并确保可靠的估计。本研究系统地比较了各种验证策略及其对多个ML分类器的影响,使用了四个不同复杂性的生物数据集,在类重叠和样本可变性方面。因此,建立了一个机器学习工作流,包含10多个分类器,并使用嵌套交叉验证(CV)进行超参数调优和性能估计。比较了五种CV策略:Leave-One-Group-Out、分层K-Fold、非分层K-Fold、Leave-One-Out和嵌套CV。我们的研究结果表明,分层的K-Fold CV在准确性和效率方面几乎等同于嵌套CV,但计算成本降低。Leave-One-Group-Out策略产生的性能估计比其他四种方法低,这可能更能代表现实世界的性能。最后,这项工作表明,在某些情况下,更简单的CV策略可以有效地取代计算昂贵的嵌套CV,同时保持相当的性能。尽管如此,在使用这些更有效的方法时,仔细考虑过拟合仍然至关重要。
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引用次数: 0
Time-Domain Raman Spectroscopy: An Emerging Technique in Space Exploration? 时域拉曼光谱:太空探索中的新兴技术?
IF 1.9 3区 化学 Q2 SPECTROSCOPY Pub Date : 2025-06-04 DOI: 10.1002/jrs.6848
Y. Ha, S. G. Pavlov, M. D. Rabasovic, A. J. Krmpot, J. Petrovic, J. Woeste, D. A. Azih, S. Wall, I. Weber, N. Stojanovic, M. Gensch

The potential of time-domain Raman spectroscopy in space exploration is discussed. This work is motivated by the emergence of robust, space-qualified femtosecond lasers and by the fact that time-domain detection allows the design of very compact instruments. As is shown, time-domain Raman spectroscopy gives access to the same fingerprint spectrum of minerals as conventional Raman spectroscopy, while avoiding problems such as fluorescence or ambient light backgrounds.

讨论了时域拉曼光谱在空间探测中的潜力。这项工作的动机是强大的、空间合格的飞秒激光器的出现,以及时域探测允许设计非常紧凑的仪器。如图所示,时域拉曼光谱提供了与传统拉曼光谱相同的矿物指纹光谱,同时避免了荧光或环境光背景等问题。
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引用次数: 0
Subtracting the Raman Spectrum of Solvent for Quantitative Analysis 溶剂拉曼光谱的减法定量分析
IF 1.9 3区 化学 Q2 SPECTROSCOPY Pub Date : 2025-06-04 DOI: 10.1002/jrs.6844
Fei Zhang, Kailin Sun, Yiming Jiang, Guoqing Jia, Fengtao Fan, Can Li

Raman spectroscopy is widely employed for quantitative analysis in aqueous solutions, yet it faces a notable challenge: the overlap of water Raman bands, often used as an internal standard, with analyte bands. To overcome this hurdle, we have developed an automated fitting method that encompasses intensity normalization, solvent subtraction, and quantitative analysis. This method utilizes the isolated Raman water spectrum as an internal standard. The effectiveness of this method has been validated through its application to the Raman spectra of Na2SO4, D-glucose, and lysozyme from egg white. These results show a strong correlation between normalized peak intensity and concentration. Furthermore, this method exhibits robustness against noise and fluorescence background, maintaining high accuracy even under low–signal-to-noise ratio (SNR) conditions, down to 20 dB. Most importantly, the fundamental principle of this method is versatile and can be applied to various types of quantitative spectral data derived from solutions.

拉曼光谱被广泛应用于水溶液的定量分析,但它面临着一个显著的挑战:水拉曼光谱(通常用作内标)与分析物光谱的重叠。为了克服这一障碍,我们开发了一种自动化的拟合方法,包括强度归一化,溶剂减法和定量分析。该方法利用孤立拉曼水光谱作为内标。通过对蛋清中Na2SO4、d -葡萄糖和溶菌酶的拉曼光谱分析,验证了该方法的有效性。这些结果表明,标准化峰强度与浓度之间存在很强的相关性。此外,该方法对噪声和荧光背景具有鲁棒性,即使在低信噪比(SNR)条件下(低至20 dB)也能保持高精度。最重要的是,该方法的基本原理是通用的,可以应用于从溶液中得到的各种类型的定量光谱数据。
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引用次数: 0
Raman Spectroscopy as a Tool for Real-Time Nutrient Monitoring in Bioreactor Cultivation of Microalgae 拉曼光谱技术在微藻生物反应器培养中的实时营养监测
IF 1.9 3区 化学 Q2 SPECTROSCOPY Pub Date : 2025-05-30 DOI: 10.1002/jrs.6841
M. Karnachoriti, M. Chatzipetrou, E. Touloupakis, A. G. Kontos, I. Zergioti

In this work, aqueous nutrient solutions replicating bioreactor culture media for microalgae were analyzed using spontaneous Raman spectroscopy. Focusing on nitrate, sulfate, glucose, and phosphate, the study evaluated their potential for real-time monitoring in cell cultivations such as Chlorella vulgaris. Univariate analysis, based on Raman intensities of specific nutrient peaks, was conducted and compared to multivariate analysis results. Four multivariate calibration models were developed using partial least squares regression (PLSR), achieving high calibration and validation performance, with R2 values above 0.99 and low RMSECV, indicating strong calibration accuracy. The study also examined the limit of detection (LOD) for each nutrient, finding that LODs for nitrate, sulfate, and glucose reached levels relevant for algae bioreactors even without the application of enhanced Raman techniques. To further validate the PLS models, independent real bioreactor samples were analyzed, showing strong predictive accuracy (RP2: 0.9661–0.9892) and low RMSEP values. Additional testing with five samples collected over a Chlorella vulgaris cultivation run (day 0 to day 9) confirmed the models' robust performance under real bioprocess conditions. Limitations in practical applications, such as phosphate's relatively high LOD, were also identified. The results suggest that Raman spectroscopy, combined with multivariate analysis, could deliver precise and reliable detection of critical nutrients and their concentrations in bioreactor culture media. This potential of the Raman technique, along with insights into nutrient LODs, PLS model accuracy, and practical application challenges, provides a solid foundation for future research and development in industrial bioprocess monitoring.

本研究利用自发拉曼光谱对微藻生物反应器培养基中的营养液进行了分析。该研究着重于硝酸盐、硫酸盐、葡萄糖和磷酸盐,评估了它们在普通小球藻等细胞培养中实时监测的潜力。基于特定营养峰拉曼强度进行单因素分析,并与多因素分析结果进行比较。采用偏最小二乘回归(PLSR)建立了4个多元校正模型,R2值均在0.99以上,RMSECV值较低,校正精度较高,具有较高的校正和验证性能。该研究还检查了每种营养物质的检测限(LOD),发现硝酸盐、硫酸盐和葡萄糖的检测限即使在没有应用增强拉曼技术的情况下也达到了与藻类生物反应器相关的水平。为了进一步验证PLS模型,对独立的真实生物反应器样本进行了分析,结果显示,PLS模型的预测精度较高(RP2: 0.9661-0.9892), RMSEP值较低。在普通小球藻(Chlorella vulgaris)培养过程中(第0天至第9天)收集的5个样本进行的额外测试证实了该模型在真实生物工艺条件下的稳健性能。实际应用的局限性,如磷酸盐的相对较高的LOD,也被确定。结果表明,拉曼光谱与多变量分析相结合,可以精确可靠地检测生物反应器培养基中的关键营养物质及其浓度。拉曼技术的这种潜力,以及对营养lod, PLS模型准确性和实际应用挑战的见解,为工业生物过程监测的未来研究和发展提供了坚实的基础。
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引用次数: 0
Detection of a Neurotoxin Quinolinic Acid at Ultra-Trace Amount: SERS and DFT Study 超痕量神经毒素喹啉酸检测:SERS和DFT研究
IF 1.9 3区 化学 Q2 SPECTROSCOPY Pub Date : 2025-05-30 DOI: 10.1002/jrs.6847
Monalisha Nayak, Chandan Bhai Patel, Om Prakash, Ashish Kumar Singh, Ranjan K. Singh

The presence of quinolinic acid (QA) below 100 nM is a normal condition while its increased amount may cause variety of neurodegenerative diseases. The precise detection of QA in trace amounts (nanomolar) is crucial to control its toxic effects. In the present study, the SERS-based detection of QA and its interaction at varying concentrations in human serum is carried out using silver nanoparticle substrates. The analysis of conformational dynamics of QA across different concentrations ranging from 10−3 to 10−9 M has been done. The adsorption mechanism between QA and silver nanoparticles has been studied using DFT, and the detection of QA up to nanomolar concentration is achieved. A significant shift in the SERS spectra of QA is observed between 10−4 and 10−5 M concentration, attributed to changes in adsorption geometry with varying pH and conformational change from zwitterionic QA → neutral QA. These findings are supported by UV–visible spectra, pH measurements, and DFT calculations.

喹啉酸(QA)低于100 nM是正常现象,但其升高可引起多种神经退行性疾病。微量(纳摩尔)QA的精确检测是控制其毒性作用的关键。在本研究中,利用纳米银颗粒底物,基于sers检测不同浓度的QA及其在人血清中的相互作用。分析了不同浓度(10−3 ~ 10−9 M)下QA的构象动力学。利用离散傅里叶变换(DFT)研究了银纳米粒子对QA的吸附机理,实现了对纳米摩尔浓度的QA的检测。在10−4和10−5 M浓度之间,QA的SERS光谱发生了显著的变化,这归因于吸附几何形状随pH值的变化以及从两性离子QA→中性离子QA的构象变化。这些发现得到了紫外可见光谱、pH值测量和DFT计算的支持。
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引用次数: 0
期刊
Journal of Raman Spectroscopy
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