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Roles of lncRNA in the diagnosis and prognosis of triple-negative breast cancer. lncRNA在三阴性乳腺癌诊断和预后中的作用。
IF 5.1 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-15 DOI: 10.1631/jzus.B2300067
Qiuhui Yang, Yeqin Fu, Jiaxuan Wang, Hongjian Yang, Xiping Zhang

Breast cancer is a malignant tumor that seriously endangers women's lives. The prognosis of breast cancer patients differs among molecular types. Compared with other subtypes, triple-negative breast cancer (TNBC) has been a research hotspot in recent years because of its high degree of malignancy, strong invasiveness, rapid progression, easy of recurrence, distant metastasis, poor prognosis, and high mortality. Many studies have found that long non-coding RNA (lncRNA) plays an important role in the occurrence, proliferation, migration, recurrence, chemotherapy resistance, and other characteristics of TNBC. Some lncRNAs are expected to become biomarkers in the diagnosis and prognosis of TNBC, and even new targets for its treatment. Based on a PubMed literature search, this review summarizes the progress in research on lncRNAs in TNBC and discusses their roles in TNBC diagnosis, prognosis, and chemotherapy with the hope of providing help for future research.

乳腺癌是一种严重危及妇女生命的恶性肿瘤。不同分子类型的乳腺癌患者预后不同。与其他亚型相比,三阴性乳腺癌(triple negative breast cancer, TNBC)因其恶性程度高、侵袭性强、进展快、易复发、远处转移、预后差、死亡率高等特点,成为近年来的研究热点。许多研究发现,长链非编码RNA (long non-coding RNA, lncRNA)在TNBC的发生、增殖、迁移、复发、化疗耐药等特征中发挥着重要作用。一些lncrna有望成为TNBC诊断和预后的生物标志物,甚至成为TNBC治疗的新靶点。本文在检索PubMed文献的基础上,综述了lncrna在TNBC中的研究进展,并探讨了lncrna在TNBC诊断、预后及化疗中的作用,希望能为今后的研究提供帮助。
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引用次数: 0
Micropeptides: origins, identification, and potential role in metabolism-related diseases. 微肽:起源、鉴定及其在代谢相关疾病中的潜在作用
IF 5.1 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-15 DOI: 10.1631/jzus.B2300128
Yirui Lu, Yutong Ran, Hong Li, Jiao Wen, Xiaodong Cui, Xiaoyun Zhang, Xiumei Guan, Min Cheng

With the development of modern sequencing techniques and bioinformatics, genomes that were once thought to be noncoding have been found to encode abundant functional micropeptides (miPs), a kind of small polypeptides. Although miPs are difficult to analyze and identify, a number of studies have begun to focus on them. More and more miPs have been revealed as essential for energy metabolism homeostasis, immune regulation, and tumor growth and development. Many reports have shown that miPs are especially essential for regulating glucose and lipid metabolism and regulating mitochondrial function. MiPs are also involved in the progression of related diseases. This paper reviews the sources and identification of miPs, as well as the functional significance of miPs for metabolism-related diseases, with the aim of revealing their potential clinical applications.

随着现代测序技术和生物信息学的发展,曾经被认为是非编码的基因组被发现编码了丰富的功能微肽(miPs),这是一种小多肽。虽然miPs很难分析和识别,但一些研究已经开始关注它们。越来越多的miPs被发现在能量代谢稳态、免疫调节和肿瘤生长发育中发挥重要作用。许多报道表明,miPs在调节糖脂代谢和调节线粒体功能方面尤为重要。MiPs还参与相关疾病的进展。本文综述了miPs的来源和鉴定,以及miPs在代谢相关疾病中的功能意义,以期揭示其潜在的临床应用。
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引用次数: 0
Abscisic acid-mediated cytosolic Ca2+ modulates triterpenoid accumulation of Ganoderma lucidum. 脱落酸介导的胞质Ca2+调节灵芝三萜积累。
IF 5.1 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-15 DOI: 10.1631/jzus.B2300279
Meilin Cui, Yitao Zhao, Xiuhong Zhang, Wei Zhao

Ganoderma lucidum is a mushroom widely used for its edible and medicinal properties. Primary bioactive constituents of G. lucidum are ganoderic triterpenoids (GTs), which exhibit important pharmacological activity. Abscisic acid (ABA), a plant hormone, is associated with plant growth, development, and stress responses. ABA can also affect the growth, metabolism, and physiological activities of different fungi and participates in the regulation of the tetracyclic triterpenes of some plants. Our findings indicated that ABA treatment promoted GT accumulation by regulating the gene expression levels (squalene synthase (sqs), 3-hydroxy-3-methylglutaryl-CoA reductase (hmgr), and lanosterol synthase (ls)), and also activated cytosolic Ca2+ channels. Furthermore, under ABA mediation, exogenous Ca2+ donors and inhibitors directly affected the cytosolic Ca2+ concentration and related gene expression in Ca2+ signaling. Our study also revealed that ABA-mediated cytosolic Ca2+ played a crucial regulatory role in GT biosynthesis, accompanied by antioxidant defense modulation with increasing superoxide dismutase (SOD) activity and ascorbate peroxidase (APX) activity, and the resistance ability of O2•- and glutathione (GSH) contents.

灵芝是一种因其食用和药用特性而广泛使用的蘑菇。灵芝的主要生物活性成分是灵芝三萜(GTs),具有重要的药理活性。脱落酸(ABA)是一种植物激素,与植物生长发育和逆境反应有关。ABA还能影响不同真菌的生长、代谢和生理活性,参与一些植物四环三萜的调控。我们的研究结果表明,ABA处理通过调节基因表达水平(角鲨烯合成酶(sqs)、3-羟基-3-甲基戊二酰辅酶a还原酶(hmgr)和羊毛甾醇合成酶(ls))促进GT积累,并激活胞质Ca2+通道。此外,在ABA介导下,外源Ca2+供体和抑制剂直接影响胞质Ca2+浓度和Ca2+信号传导相关基因的表达。我们的研究还发现,aba介导的胞质Ca2+在GT生物合成中起着至关重要的调节作用,伴随着抗氧化防御调节,增加超氧化物歧化酶(SOD)活性和抗坏血酸过氧化物酶(APX)活性,以及O2•-和谷胱甘肽(GSH)含量的抵抗能力。
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引用次数: 0
Luteolin suppresses oral carcinoma 3 (OC3) cell growth and migration via modulating polo-like kinase 1 (PLK1) expression and cellular energy metabolism. 木犀草素通过调节polo样激酶1 (PLK1)表达和细胞能量代谢抑制口腔癌3 (OC3)细胞生长和迁移。
IF 5.1 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-15 DOI: 10.1631/jzus.B2300200
Pengfei Gao, Wentao Zhang, Yujie Lin, Ruijie Lu, Zijian Lou, Gang Lu, Ruolang Pan, Yunfang Chen

Oral squamous cell carcinoma (OSCC) is a prevalent malignant tumor affecting the head and neck region (Leemans et al., 2018). It is often diagnosed at a later stage, leading to a poor prognosis (Muzaffar et al., 2021; Li et al., 2023). Despite advances in OSCC treatment, the overall 5-year survival rate of OSCC patients remains alarmingly low, falling below 50% (Jehn et al., 2019; Johnson et al., 2020). According to statistics, only 50% of patients with oral cancer can be treated with surgery. Once discovered, it is more frequently at an advanced stage. In addition, owing to the aggressively invasive and metastatic characteristics of OSCC, most patients die within one year of diagnosis. Hence, the pursuit of novel therapeutic drugs and treatments to improve the response of oral cancer to medication, along with a deeper understanding of their effects, remains crucial objectives in oral cancer research (Johnson et al., 2020; Bhat et al., 2021; Chen et al., 2023; Ruffin et al., 2023).

口腔鳞癌(Oral squamous cell carcinoma, OSCC)是一种影响头颈部的常见恶性肿瘤(Leemans et al., 2018)。它往往在较晚的阶段才被诊断出来,导致预后不良(Muzaffar等人,2021;Li et al., 2023)。尽管OSCC治疗取得了进展,但OSCC患者的总体5年生存率仍然低得惊人,低于50% (Jehn et al., 2019;Johnson et al., 2020)。据统计,只有50%的口腔癌患者可以接受手术治疗。一旦发现,它往往处于晚期。此外,由于OSCC具有侵袭性和转移性的特点,大多数患者在诊断后一年内死亡。因此,寻求新的治疗药物和治疗方法来改善口腔癌对药物的反应,以及更深入地了解其作用,仍然是口腔癌研究的重要目标(Johnson et al., 2020;Bhat等人,2021;Chen et al., 2023;Ruffin et al., 2023)。
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引用次数: 0
Proapoptotic protein Bim regulates the suppressive function of Treg cells. 促凋亡蛋白Bim调节Treg细胞的抑制功能。
IF 5.1 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-15 DOI: 10.1631/jzus.B2300288
Di Wu

Regulatory T (Treg) cells are a special immunosuppressive subset of cluster of differentiation 4-positive (CD4+‍)‍-T lymphocytes and play a pivotal role in the establishment of immune homeostasis in vivo (Zhang et al., 2021). The transcription factor forkhead box protein P3 (Foxp3) is the master marker of Treg cells, which is highly expressed in Treg cells and is also essential for their suppressive function (Hori et al., 2003). In addition to Foxp3, other regulators of Treg cells have been discovered (Wu et al., 2017, 2022; Wu and Sun, 2023a, 2023b); however, a deeper understanding of the regulation of these cells is required.

调节性T (Regulatory T, Treg)细胞是分化4阳性(CD4+‍)‍淋巴细胞簇的一种特殊的免疫抑制亚群,在体内免疫稳态的建立中起着关键作用(Zhang et al., 2021)。转录因子叉头盒蛋白P3 (Foxp3)是Treg细胞的主标记物,在Treg细胞中高度表达,对Treg细胞的抑制功能也至关重要(Hori et al., 2003)。除了Foxp3外,还发现了Treg细胞的其他调节因子(Wu et al., 2017,2022;吴、孙,2023a, 2023b);然而,需要对这些细胞的调控有更深入的了解。
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引用次数: 0
Typical hemophagocytic syndrome associated with cytomegalovirus infection in an immunocompetent patient: a case report and literature review. 免疫功能正常患者巨细胞病毒感染伴典型噬血细胞综合征1例报告及文献复习。
IF 5.1 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-15 DOI: 10.1631/jzus.B2300232
Fangfang Geng, Meifang Yang, Xuan Zhang, Hong Zhao, De Zhou, Jianhua Hu

Cytomegalovirus (CMV) infection is currently prevalent in populations throughout the world, and 56%‍-94% of the global population is seropositive for CMV. CMV infection mainly affects immunocompromised hosts. In these cases, it can cause significant symptoms, tissue-invasive disease, and many sequelae including death (Dioverti and Razonable, 2016). The vast majority of healthy adults with CMV infection experience an asymptomatic course; when symptomatic, it manifests as a mononucleosis-like syndrome in approximately 10% of patients (Sridhar et al., 2018). The gastrointestinal tract and central nervous system appear to be the most frequent sites of severe CMV infection in immunocompetent individuals (Rafailidis et al., 2008). However, CMV infection is relatively rarely recorded in immunocompetent hosts.

巨细胞病毒(CMV)感染目前在世界各地的人群中普遍存在,56%‍-94%的全球人群巨细胞病毒血清阳性。巨细胞病毒感染主要影响免疫功能低下的宿主。在这些情况下,它会引起明显的症状、组织侵袭性疾病和许多后遗症,包括死亡(Dioverti和Razonable, 2016)。绝大多数感染巨细胞病毒的健康成人经历无症状病程;当出现症状时,大约10%的患者表现为单核细胞增多症样综合征(Sridhar et al., 2018)。胃肠道和中枢神经系统似乎是免疫正常个体中最常见的严重巨细胞病毒感染部位(Rafailidis et al., 2008)。然而,CMV感染在免疫正常的宿主中相对较少记录。
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引用次数: 0
A case of vitiligo after COVID-19 vaccination: a possible role of thymic dysfunction. COVID-19疫苗接种后白癜风1例:胸腺功能障碍的可能作用
IF 5.1 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-15 DOI: 10.1631/jzus.B2300025
Denis Kuznetsov, Oleg Kalyuzhin, Andrey Mironov, Valery Neschisliaev, Anastasiia Kuznetsova

During the coronavirus disease 2019 (COVID-19) pandemic, vaccines help control the spread of infection. To date, 47 vaccines have been approved, with another 227 candidates in various stages of development. In the short period of time since the beginning of their use, evidence has begun to emerge of complications following vaccination in the form of the development or exacerbation of a number of pathological conditions (Block et al., 2022; Haseeb et al., 2022). For example, a population-based study in France identified 1612 cases of myocarditis and 1613 cases of pericarditis requiring hospital treatment within five months of vaccination (le Vu et al., 2022).

在2019冠状病毒病(COVID-19)大流行期间,疫苗有助于控制感染的传播。迄今为止,已有47种疫苗获得批准,另有227种候选疫苗处于不同的开发阶段。自疫苗开始使用以来的短时间内,已开始出现疫苗接种后并发症的证据,表现为多种病理状况的发展或恶化(Block等人,2022;Haseeb et al., 2022)。例如,法国的一项基于人群的研究发现,在接种疫苗后的五个月内,有1612例心肌炎和1613例心包炎需要住院治疗(le Vu et al., 2022)。
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引用次数: 0
Fibrillarin promotes homologous recombination repair by facilitating the recruitment of recombinase RAD51 to DNA damage sites. 纤维蛋白通过促进重组酶RAD51在DNA损伤位点的募集来促进同源重组修复。
IF 5.1 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-15 DOI: 10.1631/jzus.B2300518
Yanhua Mu, Jinhua Han, Mingjie Wu, Zongfang Li, Ke DU, Yameng Wei, Mengjie Wu, Jun Huang

Eukaryotic organisms constantly face a wide range of internal and external factors that cause damage to their DNA. Failure to accurately and efficiently repair these DNA lesions can result in genomic instability and the development of tumors (Canela et al., 2017). Among the various forms of DNA damage, DNA double-strand breaks (DSBs) are particularly harmful. Two major pathways, non-homologous end joining (NHEJ) and homologous recombination (HR), are primarily responsible for repairing DSBs (Katsuki et al., 2020; Li and Yuan, 2021; Zhang and Gong, 2021; Xiang et al., 2023). NHEJ is an error-prone repair mechanism that simply joins the broken ends together (Blunt et al., 1995; Hartley et al., 1995). In contrast, HR is a precise repair process. It involves multiple proteins in eukaryotic cells, with the RAD51 recombinase being the key player, which is analogous to bacterial recombinase A (RecA) (Shinohara et al., 1992). The central event in HR is the formation of RAD51-single-stranded DNA (ssDNA) nucleoprotein filaments that facilitate homology search and DNA strand invasion, ultimately leading to the initiation of repair synthesis (Miné et al., 2007; Hilario et al., 2009; Ma et al., 2017).

真核生物不断面临各种内部和外部因素对其DNA造成损害。如果不能准确有效地修复这些DNA损伤,可能会导致基因组不稳定和肿瘤的发展(Canela et al., 2017)。在各种形式的DNA损伤中,DNA双链断裂(DSBs)尤其有害。非同源末端连接(non-homologous end joining, NHEJ)和同源重组(homologous recombination, HR)是修复dsb的主要途径(Katsuki et al., 2020;李和袁,2021;张和龚,2021;Xiang et al., 2023)。NHEJ是一种容易出错的修复机制,它只是将断裂的末端连接在一起(Blunt et al., 1995;Hartley et al., 1995)。相反,人力资源管理是一个精确的修复过程。它涉及真核细胞中的多种蛋白质,其中RAD51重组酶是关键角色,类似于细菌重组酶A (RecA) (Shinohara et al., 1992)。HR的中心事件是rad51 -单链DNA (ssDNA)核蛋白细丝的形成,促进同源性搜索和DNA链入侵,最终导致修复合成的启动(min等人,2007;Hilario et al., 2009;Ma等人,2017)。
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引用次数: 0
Spatial expression of the nonsense-mediated mRNA decay factors UPF3A and UPF3B among mouse tissues. 无义介导的mRNA衰变因子UPF3A和UPF3B在小鼠组织中的空间表达。
IF 5.1 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-15 DOI: 10.1631/jzus.B2300126
Xin Ma, Yan Li, Chen Chengyan, Yanmin Shen, Hua Wang, Tangliang Li
无义介导的信使RNA(mRNA)降解途径(nonsense-mediated mRNA decay,简称为NMD)是真核生物细胞内一种重要的基因转录后表达调控机制,它积极参与一系列细胞生理和生化过程,控制细胞命运和生命体的组织稳态。NMD的缺陷会导致人类疾病,如神经发育障碍、肿瘤发生和自身免疫疾病等。UPF3(Up-frameshift protein 3)是一个核心的NMD因子,它最早在酵母中被发现。UPF3A和UPF3B是UPF3在生物进化到脊椎动物阶段出现的两个旁系同源物,在NMD中具有激活或抑制的作用。以往研究发现,UPF3B蛋白几乎在所有哺乳动物器官中均有表达,而UPF3A蛋白在除睾丸外的大多数哺乳动物组织中难以被检测到。解释这一现象的假说为:在NMD途径中,UPF3B具有比UPF3A更高的竞争性结合UPF2的能力,UPF3B和UPF2的结合促使UPF3A成为游离状态,而游离的UPF3A蛋白不稳定且易被降解。此假说提示UPF3A和UPF3B在NMD中存在拮抗作用。在本研究中,我们重新定量评估了UPF3A和UPF3B在野生型成年雄性和雌性小鼠的9个主要组织和生殖器官中的mRNA和蛋白表达,结果证实UPF3A在雄性生殖细胞中表达量最高。令人惊讶的是,我们发现在包括大脑和胸腺在内的大多数组织中,UPF3A与UPF3B的蛋白水平相当,而在小鼠脾、肺组织中,UPF3A表达高于UPF3B。公共基因表达数据进一步支持了上述发现。因此,我们的研究表明了UPF3A是小鼠组织中普遍表达的NMD因子。同时,该研究结果推测:在生理条件下,UPF3A和UPF3B蛋白之间不存在竞争抑制,且UPF3A在多种哺乳动物组织的稳态中发挥重要作用。
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引用次数: 0
HPCAL1 is a novel driver of autophagy-dependent ferroptosis. HPCAL1是一种新的自噬依赖性铁下垂驱动因子。
IF 5.1 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-15 DOI: 10.1631/jzus.B2300241
Liwen Wang, Qin Li, Huimei Liu, Lanfang Li
自噬是细胞内一种高度保守的生理过程,可通过溶酶体系统降解过量或受损的细胞器、有毒的蛋白聚集体和病 原体等。最新研究表明,海马钙素样1(HPCAL1)可作为特异性自噬受体和铁死亡的正调节因子。HPCAL1可选择性 降解钙粘素2(CDH2),加速脂质过氧化,促进癌细胞铁死亡。iHPCAL1是抑制HPCAL1的小分子化合物,可抑制 Erastin诱导的肿瘤细胞铁死亡。此外,它还可以抑制铁死亡诱导的急性胰腺炎。本文通过对HPCAL1在铁死亡中的具 体作用机制进行概述,为HPCAL1作为铁死亡相关疾病的潜在治疗靶点提供新思路和理论依据。
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引用次数: 0
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Journal of Zhejiang University SCIENCE B
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