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Purification and characterization of a cold-active, organic solvent-, and surfactant-tolerant cellulase from Pseudomonas fragi HsL3-1 isolated from Hengshui Lake sediments. 衡水湖沉积物中fragi假单胞菌hsl1 -1冷活性、耐溶剂和表面活性剂纤维素酶的纯化与表征
IF 2.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-08-04 DOI: 10.1093/lambio/ovaf102
Chao Zhang, Jing Chen, Peixun Zhang, Jinnan Zong, Mingyu Geng, Xuying Yao, Jinxu Sun

Cold-active cellulases attract significant attention for their potential in energy-efficient bioprocesses under low-temperature conditions. In this study, a psychrotolerant bacterial strain, Pseudomonas fragi HsL3-1, was isolated from Hengshui Lake sediments and found to produce a novel endoglucanase, EG-22SJ. The enzyme demonstrated optimal activity at pH 5.0 and 25°C, retaining over 80% and 60% of peak activity at 15°C and 5°C, respectively, and exhibited exceptional tolerance to 20% organic solvents (e.g. n-hexane enhanced activity by 29.8%) and 1% surfactants (e.g. Tween 80). Kinetic analysis revealed high substrate affinity for CMC-Na with a Km of 0.583 mg·ml-1 and Vmax of 401 μmol·l-1·min-1. Activity was significantly activated by Ca²⁺ and Mg²⁺ but inhibited by Cu²⁺ and Hg²⁺. Culture optimization via response surface methodology increased cellulase production to 8.71 U·ml-1 under conditions of 15.24 g·l-1 CMC-Na, 20.54°C, pH 6.85, and 1.95% inoculation, yielding a 1.24-fold improvement. These integrated properties position EG-22SJ as a robust biocatalyst for sustainable low-temperature applications such as biofuel production, food processing, and detergent formulation, highlighting the potential of nonextreme environments for enzyme discovery.

冷活性纤维素酶因其在低温条件下节能生物过程中的潜力而备受关注。本研究从衡水湖沉积物中分离到一株耐寒细菌——fragi假单胞菌HsL3-1,发现其可产生一种新型内切葡聚糖酶EG-22SJ。该酶在pH 5.0和25°C时表现出最佳活性,在15°C和5°C时分别保持峰值活性的80%和60%以上,并且对20%有机溶剂(如正己烷增强活性29.8%)和1%表面活性剂(如Tween 80)表现出优异的耐受性。动力学分析显示CMC-Na对底物有很高的亲和力,K ω = 0.583 mg·mL-1, V ω = 401 μmol·L·min⁻¹。Ca 2 +和Mg 2 +明显激活活性,Cu 2 +和Hg 2 +抑制活性。在CMC-Na浓度为15.24 g·L-1、温度为20.54℃、pH为6.85、接种量为1.95%的条件下,通过响应面法优化培养,纤维素酶产量达到8.71 U·mL-1,提高了1.24倍。这些综合特性使EG-22SJ成为可持续低温应用的强大生物催化剂,如生物燃料生产、食品加工和洗涤剂配方,突出了非极端环境对酶发现的潜力。
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引用次数: 0
Complete removal of COD from potato processing wastewater by co-cultivation of Haematococcus pluvialis and Gordonia terrae. 雨红球菌与地戈登菌共培养完全去除马铃薯加工废水中的COD。
IF 2.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-08-04 DOI: 10.1093/lambio/ovaf108
Dayang Gao, Jie Lv, Xiangying Xing, Qinglin Dong, Jiahui Tian, Xuan Zhou

For efficient removal of COD from the potato processing wastewater, the green alga Haematococcus pluvialis and the bacterium Gordonia terrae were co-cultivated in sterilized wastewater. Results showed that co-cultivation of H. pluvialis and G. terrae enhanced COD removal by promoting cell growth, with the highest removal efficiency (88.9%) on day 12 and removal rate (305.3 mg·L-1·d-1) being achieved at the optimal inoculation ratio of 40:1, increasing 298.6%, 353%, and 159.9%, and 227.6% compared to those of the pure culture of H. pluvialis (22.3%, 67.4 mg·L-1·d-1) and G. terrae (34.2%, 93.2 mg·L-1·d-1), respectively. Supplementation of NaNO3 at the lowest concentration of 0.2 g·L-1 further promoted COD removal efficiency to 100% on day 10. Hence, co-cultivation of H. pluvialis and G. terrae provides an efficient way for complete removal of COD from wastewaters with the suitable COD/nitrogen ratio (C/N) of 8.08.

为有效去除马铃薯加工废水中的COD,在消毒后的废水中共同培养雨生红球藻和地生戈登菌。结果表明,水蛭与地鼠共培养通过促进细胞生长来提高COD的去除率,在最佳接种比为40:1时,第12天的去除率最高(88.9%),去除率为305.3 mg·L-1·d-1,比水蛭纯培养(22.3%,67.4 mg·L-1·d-1)和地鼠纯培养(34.2%,93.2 mg·L-1·d-1)分别提高298.6%、353%和159.9%、227.6%。添加最低浓度0.2 g·L-1的NaNO3进一步提高了COD去除率,第10天达到100%。因此,雨水蛭与地水蛭共生可有效去除废水中的COD,适宜的COD/氮比(C/N)为8.08。
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引用次数: 0
Water supply from various sources has different effects on solid-state fermentation of Ganoderma lucidum. 不同水源对灵芝固态发酵的影响不同。
IF 2.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-02 DOI: 10.1093/lambio/ovaf095
Wei Yi, Qingmei Xiao, Mi Wei, Feitong Li, Longyu Wang, Jian He, Ang Ren, Ailiang Jiang, Ran Tao, Bangchao Zhong, Qin He

Water is essential in solid-state fermentation (SSF), but the impact of different water sources on SSF efficiency remains unclear. This study investigated the effects of different water sources on water-supply SSF of Ganoderma lucidum. The results showed that supplementation with normal saline led to the highest levels of laccase, CMCase, FPA activities, and biomass of G. lucidum (93.47, 140.34, 172.42 U/g, and 0.19 g/g, respectively), almost all significantly higher than those in the tap water group (83.57, 126.36, 167.17 U/g, and 0.18 g/g) and the deionized water group (77.25, 120.91, 145.50 U/g, and 0.16 g/g). Normal saline also significantly increased the capillary water content during SSF, which was 5.38% and 19.05% higher than that in the tap water and deionized water groups, respectively. Furthermore, the relaxation time of capillary water in the normal saline group decreased by 49.09%, a reduction that was higher than those observed in the tap water group (43.41%) and the deionized water group (29.56%). In conclusion, normal saline demonstrated distinct advantages in enhancing SSF efficiency, thus providing a scientific basis for the selection of water sources in the fermentation of G. lucidum and other microorganisms.

水在固态发酵中是必不可少的,但不同水源对固态发酵效率的影响尚不清楚。本研究研究了不同水源对灵芝供水SSF的影响。结果表明:添加生理盐水时,灵芝的漆酶、CMCase、FPA活性和生物量最高(分别为93.47、140.34、172.42和0.19 g/g),均显著高于自来水组(83.57、126.36、167.17和0.18 g/g)和去离子水组(77.25、120.91、145.50和0.16 g/g);生理盐水也显著增加了SSF期间毛细血管含水量,分别比自来水组和去离子水组高5.38%和19.05%。生理盐水组毛细血管水弛豫时间缩短49.09%,明显高于自来水组(43.41%)和去离子水组(29.56%)。综上所述,生理盐水在提高SSF效率方面具有明显优势,为灵芝等微生物发酵过程中水源的选择提供了科学依据。
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引用次数: 0
Impact of inoculum composition on bacteria and bacteriophage UVC inactivation at 222 nm and 254 nm. 接种量组成对细菌和噬菌体在222 nm和254 nm灭活UVC的影响。
IF 2 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-02 DOI: 10.1093/lambio/ovaf090
Katherine Ratliff, Michael Worth Calfee, Ahmed Abdel-Hady, Mariela Monge, Denise Aslett, Lukas Oudejans

Using technologies that emit ultraviolet-C (UVC) radiation to inactivate pathogens has gained increasing interest as a strategy for reducing the risk of disease transmission, but it can be difficult to predict their performance in applied settings. Directly irradiating occupied spaces with emerging far-UVC has been proposed, as its shorter wavelength (200-230 nm) is reportedly less damaging to human eyes and skin than longer wavelengths. In this study, we conducted surface tests to evaluate the impact of different inoculum compositions (with and without soil loads) and conditions (wet vs. dried droplets) to determine how these factors affect the efficacy of UVC sources with peak emissions at 254 and 222 nm against five bacteria and two bacteriophages. The presence of a soil load reduced the efficacy of 222-nm UVC more than that at 254 nm, and both UVC sources were generally less effective against microbes in dried (vs. wet) inoculum. Given that pathogens will often be exposed to UVC in the presence of proteins, salts, and other constituents depending on how they are emitted, it is important to consider these challenges when quantifying efficacy.

使用发射紫外线c (UVC)辐射的技术来灭活病原体作为一种降低疾病传播风险的策略已经引起了越来越多的兴趣,但是很难预测它们在应用环境中的性能。据报道,远紫外线波长较短(200-230纳米)对人眼和皮肤的伤害比波长较长的要小,因此有人建议用远紫外线直接照射占据的空间。在这项研究中,我们进行了表面测试,以评估不同接种成分(有和没有土壤负荷)和条件(湿滴和干滴)的影响,以确定这些因素如何影响峰值发射在254 nm和222 nm的UVC源对五种细菌和两种噬菌体的效果。土壤负荷的存在使222 nm的UVC效力比254 nm的降低,并且两种UVC源在干燥(与湿)接种物中对微生物的作用通常较低。鉴于病原体经常会暴露在有蛋白质、盐和其他成分存在的UVC中,这取决于它们是如何释放的,因此在量化功效时考虑这些挑战是很重要的。
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引用次数: 0
Short-chain fatty acids and their role in modulating autoimmune responses in psoriasis: insights from recent microbiota research. 短链脂肪酸及其在调节银屑病自身免疫反应中的作用:来自最近微生物群研究的见解。
IF 2 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-02 DOI: 10.1093/lambio/ovaf091
Narges Fallahi, Mitra Rafiee, Seyedeh Sindokht Hosseini, Nasrin Sereshki, Gholamreza Anani Sarab, Nafiseh Erfanian

Psoriasis, a chronic skin autoimmune disease characterized by abnormal immune responses, is influenced by genetic and environmental factors. Recent microbiota research has revealed that short-chain fatty acids (SCFAs), metabolites produced by gut microbiota, play a pivotal role in regulating immune function and inflammation. This review examines the current literature on the relationship between gut dysbiosis, SCFA production, and immune modulation in psoriasis, focusing on emerging evidence from microbiota and immunological studies. SCFAs have been shown to influence key immune pathways, including T-cell activation and cytokine production, which are critical in psoriasis pathogenesis. Reduced SCFA levels have been observed in psoriasis, highlighting the role of gut dysbiosis in disease progression. Understanding the gut-skin axis and the role of SCFAs offers novel insights into developing effective, safe, and accessible treatments for psoriasis. Restoring microbial balance and SCFA production may serve as a promising therapeutic approach for managing psoriasis.

牛皮癣是一种以免疫反应异常为特征的慢性皮肤自身免疫性疾病,受遗传和环境因素的影响。最近的微生物群研究表明,短链脂肪酸(SCFAs)是肠道微生物群产生的代谢物,在调节免疫功能和炎症中起着关键作用。本文回顾了目前关于牛皮癣肠道生态失调、SCFA产生和免疫调节之间关系的文献,重点关注微生物群和免疫学研究的新证据。scfa已被证明影响关键的免疫途径,包括t细胞活化和细胞因子的产生,这是银屑病发病的关键。在牛皮癣中观察到SCFA水平降低,强调了肠道生态失调在疾病进展中的作用。了解肠道-皮肤轴和scfa的作用为开发有效、安全和可及的牛皮癣治疗方法提供了新的见解。恢复微生物平衡和SCFA的产生可能是治疗牛皮癣的一种有前途的治疗方法。
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引用次数: 0
Correction to: Comparative analysis of the roles of catalases KatB and KatG in the physiological fitness and pathogenesis of fish pathogen Edwardsiella tarda. 校正:过氧化氢酶KatB和KatG在鱼类迟缓爱德华菌生理适应度和发病机制中的比较分析。
IF 2.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-02 DOI: 10.1093/lambio/ovaf098
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引用次数: 0
Molecular mechanisms of heavy metal resistance and cross-/co-resistance to antibiotics in Pseudomonas aeruginosa. 铜绿假单胞菌重金属耐药及交叉/共耐药的分子机制。
IF 2.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-02 DOI: 10.1093/lambio/ovaf094
Bilel Hassen, Mohamed Salah Abbassi

Heavy metal pollution is a growing environmental and public health concern, particularly due to its impact on microbial communities. Pseudomonas aeruginosa, a highly adaptable bacterium, has developed resistance to heavy metals (HMs), which is closely linked to antibiotic resistance through shared genetic and regulatory pathways. This co-resistance poses significant challenges for environmental health and antimicrobial management. Additionally, microplastics act as carriers for HMs and antibiotics, creating a compounded pollution stressor that further influences bacterial resistance patterns. This review explores the molecular mechanisms by which P. aeruginosa resists heavy metal toxicity, focusing on key adaptive strategies such as efflux systems, biofilm formation, enzymatic detoxification, and genetic modifications. These mechanisms enhance bacterial survival in contaminated environments, allowing P. aeruginosa to persist and contribute to the spread of resistance genes. The interplay between HMs, antibiotics, and microplastics underscores the complexity of pollution-driven bacterial adaptation. Addressing these issues requires a multidisciplinary approach that integrates environmental pollution control and antimicrobial resistance management. Understanding how P. aeruginosa thrives under such stress conditions is crucial for developing effective strategies to mitigate the risks associated with heavy metal contamination, antibiotic resistance, and microplastic pollution in both natural and clinical ecosystems.

重金属污染是一个日益严重的环境和公共卫生问题,特别是由于它对微生物群落的影响。铜绿假单胞菌(Pseudomonas aeruginosa)是一种适应性很强的细菌,已对重金属产生耐药性,这与抗生素耐药性通过共享的遗传和调控途径密切相关。这种共同耐药性对环境卫生和抗菌素管理构成重大挑战。此外,微塑料作为HMs和抗生素的载体,创造了一个复合的污染压力源,进一步影响细菌的耐药性模式。本文综述了铜绿假单胞菌(P. aeruginosa)抵抗重金属毒性的分子机制,重点介绍了其关键的适应策略,如外排系统、生物膜形成、酶解毒和基因修饰。这些机制增强了细菌在污染环境中的生存,使铜绿假单胞菌得以持续存在并促进耐药基因的传播。HMs、抗生素和微塑料之间的相互作用强调了污染驱动的细菌适应的复杂性。解决这些问题需要多学科方法,将环境污染控制和抗菌素耐药性管理结合起来。了解铜绿假单胞菌如何在这种应激条件下茁壮成长,对于制定有效策略以减轻自然和临床生态系统中重金属污染、抗生素耐药性和微塑料污染相关的风险至关重要。
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引用次数: 0
The contribution of irrigation water and growth substrate for microbial flux in a vertical farm. 灌溉水和生长基质对垂直农场微生物通量的贡献。
IF 2 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-02 DOI: 10.1093/lambio/ovaf093
Elliot Erskine, Niall Skinner, Nicola Holden

Controlled environmental agriculture (CEA) is an emerging technology with increasing adoption for commercial applications. However, its impact on the plant microbiome is not entirely clear. The assumption is that controlled conditions reduce the risk of introduction and spread of pathogens, human or plant. Here, we assessed the microbial flux through a commercially relevant CEA plant growth tower from culture-dependent and independent approaches. This allowed the relationship between two of the main entry points for microbes to be determined, the circulating water system and plant growth substrates, on two crop species systems, kale and lettuce. There was a clear distinction between the taxonomic compositions of bacteria in the water-associated and coir-associated compartments. Overall, water did not contribute the most abundant members of the microbiota on plants. Rainwater, used as a top-up source of water, was not the major source of sequenced microbes in either the circulating water system or in coir compartments. The main points of expansion of cultural microbes were in the irrigation tray system and the physical presence and growth of the crop plants. The effect of UV-C, typically used to treat water, and the LED lighting system were quantified for proxy pathogen strains.

可控环境农业(CEA)是一项新兴技术,越来越多地应用于商业应用。然而,它对植物微生物群的影响尚不完全清楚。假设受控的条件可以降低病原体(人类或植物)传入和传播的风险。在这里,我们通过商业相关的CEA植物生长塔从培养依赖和独立的方法评估了微生物通量。这使得微生物的两个主要入口之间的关系得以确定,循环水系统和植物生长基质,在两种作物物种系统,羽衣甘蓝和生菜。在水相关室和椰子相关室中,细菌的分类组成有明显的区别。总的来说,水并没有贡献植物上最丰富的微生物群成员。作为补充水源的雨水,在循环水系统或coir隔间中都不是测序微生物的主要来源。培养微生物扩展的主要点是在灌溉托盘系统和作物植株的物理存在和生长。量化了用于水处理的UV-C和LED照明系统对代理病原体菌株的影响。
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引用次数: 0
The overlooked hazard: Clostridioides difficile in preterm infants and immature immune systems-harnessing postbiotics for safer therapeutic strategies. 被忽视的危害:艰难梭菌对早产儿和未成熟免疫系统的影响——利用后生物制剂获得更安全的治疗策略。
IF 2 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-02 DOI: 10.1093/lambio/ovaf083
Roya Abedi Soleimani, Payam Gonbari Milani, Nader Khani, Aziz Homayouni-Rad

Clostridioides difficile is a potentially harmful bacterium that can affect preterm infants more seriously than full-term infants, largely due to their immature immune systems and underdeveloped gut microbiota. Although colonization with C. difficile is often harmless in healthy babies, preterm infants are more likely to develop infections, which can lead to serious health problems. This review looks at how an immature immune system and an imbalanced gut microbiome increase the risk of C. difficile infection (CDI) in early life. To reduce this risk, researchers are exploring postbiotics-non-living bacterial products or byproducts-as a safer alternative to traditional treatments like antibiotics. Postbiotics can help by strengthening the gut barrier, reducing inflammation, and supporting the growth of beneficial bacteria. They are also considered safe for use in vulnerable populations, including infants. This review discusses the types of postbiotics, their functions, and how they may help prevent or manage CDI. It also highlights their potential for use in infant formula as a preventative strategy. Overall, postbiotics may offer a promising new way to protect preterm infants from C. difficile and support healthier immune and gut development.

艰难梭菌是一种潜在的有害细菌,对早产儿的影响比足月婴儿更严重,这主要是由于早产儿的免疫系统不成熟和肠道微生物群不发达。虽然艰难梭菌在健康婴儿体内的定植通常是无害的,但早产儿更容易感染,这可能导致严重的健康问题。这篇综述着眼于不成熟的免疫系统和不平衡的肠道微生物群如何增加生命早期艰难梭菌感染(CDI)的风险。为了降低这种风险,研究人员正在探索后生物制剂——非活细菌产品或副产品——作为抗生素等传统治疗方法的更安全替代品。益生菌可以加强肠道屏障,减少炎症,支持有益细菌的生长。它们也被认为对包括婴儿在内的弱势群体是安全的。这篇综述讨论了后生物制剂的类型,它们的功能,以及它们如何帮助预防或控制CDI。它还强调了它们作为一种预防策略在婴儿配方奶粉中使用的潜力。总的来说,益生后可能提供了一种有希望的新方法来保护早产儿免受艰难梭菌的侵害,并支持更健康的免疫和肠道发育。
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引用次数: 0
Paulownin triazole-chloroquinoline derivative: a promising antiviral candidate against chikungunya virus. 泡桐碱三唑-氯喹啉衍生物:一种有前途的基孔肯雅病毒抗病毒药物。
IF 2 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-02 DOI: 10.1093/lambio/ovaf092
Adriana Cotta Cardoso Reis, Camila Mendes de Oliveira, Beatriz Carvalho Rangel, Laura Vogas Bonsucesso de Carvalho, Camila Portruneli, Livia da Cunha Agostini, Isadora Oliveira Ansaloni Pereira, Breno de Mello Silva, Cíntia Lopes de Brito Magalhães, Glenda Nicioli da Silva, Guilherme Rocha Pereira, Geraldo Célio Brandão

Viral infections, including arboviruses such as chikungunya, zika, dengue, and mayaro fever, remain significant global health and economic challenges, fueled by the emergence and resurgence of mosquito-borne diseases. Natural products, especially plant-derived compounds, have been crucial in drug discovery and often serve as scaffolds for synthetic drug development. This study focused on modifying paulownin, an isolated lignan, through a Click reaction to incorporate 1,2,3-triazole and quinolinic ring frameworks. The resulting derivative 7 was evaluated for its in vitro antiviral activity against Alphavirus chikungunya (CHIKV). The paulownin derivative 7 did not exhibit cytotoxicity in Vero cells and demonstrated potent activity against CHIKV, with median effective concentration value of 9.05 µM and a selectivity index exceeding 16.8. Furthermore, compound 7 outperformed positive controls, being over 46 times more active against CHIKV. Cytopathic effect assays confirmed this anti-CHIKV activity. The virucidal assay indicated that the compound does not exert a direct effect on CHIKV particles before cell infection. RT-qPCR studies further demonstrated derivative 7 significantly reduces CHIKV replication. These findings highlight the paulownin derivative 7 as a promising and selective candidate for CHIKV treatment.

病毒感染,包括基孔肯雅热、寨卡病毒、登革热和马雅罗热等虫媒病毒,仍然是全球卫生和经济面临的重大挑战,蚊子传播疾病的出现和死灰复燃加剧了这一挑战。天然产物,特别是植物衍生的化合物,在药物发现中起着至关重要的作用,经常作为合成药物开发的支架。本研究主要是通过Click反应对分离的木脂素泡桐素进行修饰,以加入1,2,3-三唑和喹啉环框架。对所得衍生物7体外对基孔肯雅甲病毒(CHIKV)的抗病毒活性进行了评价。泡桐素衍生物7对Vero细胞无细胞毒性,对CHIKV病毒具有较强的抗虫活性,有效浓度中位数为9.05µM,选择性指数超过16.8。此外,化合物7的抗CHIKV活性是阳性对照的46倍以上。细胞病变效应实验证实了这种抗chikv病毒的活性。杀病毒实验表明,该化合物在细胞感染前对CHIKV颗粒无直接作用。RT-qPCR研究进一步证明衍生物7显著降低了CHIKV复制。这些发现突出了泡桐素衍生物7作为治疗CHIKV的有前途和选择性的候选物。
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引用次数: 0
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Letters in Applied Microbiology
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