Christian K. Fender, Moira Décima, Andres Gutiérrez-Rodríguez, Karen E. Selph, Karl A. Safi, Michael R. Stukel
While pelagic tunicates are known to exert strong influences on ecosystem trophic and biogeochemical function, it has long been assumed that their shortcutting of traditional planktonic food webs results in a dead-end with respect to higher trophic levels given their poor nutritional quality. Growing reports of salps as prey in various fish diets challenge this notion. Here we combine insights into salp feeding with a variety of other in-situ rate measurements of New Zealand's Chatham Rise to reconstruct the most likely energy flows within the ecosystems using linear inverse ecosystem modeling. We then utilize model results to assess diets, production, and ecosystem efficiency for each of the key functional groups in the system, including economically important higher trophic levels and fisheries. We find that rather than acting as a trophic dead-end, the shorter energetic pathways introduced by salps increase overall ecosystem efficiency. Through their direct consumption by fish such as myctophids and oreo, these salp-driven energetic savings are efficiently passed on to higher trophic levels, increasing NPP-normalized secondary production by 130% relative to areas with background salp abundances. This finding challenges the hypothesis that an increased dominance of gelatinous zooplankton (brought on by climate change) will negatively impact global fisheries and instead suggests that species able to directly or indirectly access enhanced gelatinous production may instead benefit from the tighter coupling to lower trophic levels.
{"title":"Inverse modeling reveals efficient salp-mediated energy flow to higher trophic levels","authors":"Christian K. Fender, Moira Décima, Andres Gutiérrez-Rodríguez, Karen E. Selph, Karl A. Safi, Michael R. Stukel","doi":"10.1002/lno.70335","DOIUrl":"10.1002/lno.70335","url":null,"abstract":"<p>While pelagic tunicates are known to exert strong influences on ecosystem trophic and biogeochemical function, it has long been assumed that their shortcutting of traditional planktonic food webs results in a dead-end with respect to higher trophic levels given their poor nutritional quality. Growing reports of salps as prey in various fish diets challenge this notion. Here we combine insights into salp feeding with a variety of other in-situ rate measurements of New Zealand's Chatham Rise to reconstruct the most likely energy flows within the ecosystems using linear inverse ecosystem modeling. We then utilize model results to assess diets, production, and ecosystem efficiency for each of the key functional groups in the system, including economically important higher trophic levels and fisheries. We find that rather than acting as a trophic dead-end, the shorter energetic pathways introduced by salps increase overall ecosystem efficiency. Through their direct consumption by fish such as myctophids and oreo, these salp-driven energetic savings are efficiently passed on to higher trophic levels, increasing NPP-normalized secondary production by 130% relative to areas with background salp abundances. This finding challenges the hypothesis that an increased dominance of gelatinous zooplankton (brought on by climate change) will negatively impact global fisheries and instead suggests that species able to directly or indirectly access enhanced gelatinous production may instead benefit from the tighter coupling to lower trophic levels.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 2","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-02-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146260836","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Mitch R. Kehne, Jill A. Olin, James R. Junker, Trista J. Vick-Majors, Gordon Paterson
Dreissenid mussels represent two of the most problematic invasive species in the Laurentian Great Lakes yet little is known regarding the biochemical and nutritional composition of the veliger larval stage. Here, we quantified energy densities and fatty acids (FA) in veligers as metrics of nutritional quality relative to those determined for three size fractions of crustacean zooplankton collected from Lake Huron's Saginaw Bay. Veliger energy densities ranged from 1.14 to 1.72 kJ g−1 (wet wt.) and were significantly (p < 0.001) lower than energy densities of 1.91 ± 0.23 kJ g−1 (64–150 μm); 1.94 ± 0.10 kJ g−1 (150–250 μm); and 1.85 ± 0.19 kJ g−1 (≥ 250 μm) for size fractionated crustacean zooplankton. Nutritional quality indicators including the unsaturation index (UI) suggested veligers (238 ± 229) were similar to those for 64–150 (233 ± 21), 150–250 (206 ± 30) and ≥ 250 μm (195 ± 49) zooplankton size fractions. However, veliger UIs were primarily driven by high docosahexaenoic acid content relative to zooplankton size fractions. For other essential compounds including arachidonic, α-linolenic and eicosapentaenoic FAs, veligers consistently ranked the lowest. These results demonstrate veligers to be of lower caloric content relative to zooplankton, especially compared to similarly sized 64–150 μm planktonic biomass and of lower overall nutritional quality with respect to fatty acid composition. This study provides benchmarks regarding the overall nutritional quality of veligers and furthers our understanding energy and nutrient availability among the lower trophic levels of food webs in invaded ecosystems.
{"title":"Energy densities and fatty acids demonstrate the low quality of dreissenid veligers","authors":"Mitch R. Kehne, Jill A. Olin, James R. Junker, Trista J. Vick-Majors, Gordon Paterson","doi":"10.1002/lno.70325","DOIUrl":"10.1002/lno.70325","url":null,"abstract":"<p>Dreissenid mussels represent two of the most problematic invasive species in the Laurentian Great Lakes yet little is known regarding the biochemical and nutritional composition of the veliger larval stage. Here, we quantified energy densities and fatty acids (FA) in veligers as metrics of nutritional quality relative to those determined for three size fractions of crustacean zooplankton collected from Lake Huron's Saginaw Bay. Veliger energy densities ranged from 1.14 to 1.72 kJ g<sup>−1</sup> (wet wt.) and were significantly (<i>p</i> < 0.001) lower than energy densities of 1.91 ± 0.23 kJ g<sup>−1</sup> (64–150 <i>μ</i>m); 1.94 ± 0.10 kJ g<sup>−1</sup> (150–250 <i>μ</i>m); and 1.85 ± 0.19 kJ g<sup>−1</sup> (≥ 250 <i>μ</i>m) for size fractionated crustacean zooplankton. Nutritional quality indicators including the unsaturation index (UI) suggested veligers (238 ± 229) were similar to those for 64–150 (233 ± 21), 150–250 (206 ± 30) and ≥ 250 <i>μ</i>m (195 ± 49) zooplankton size fractions. However, veliger UIs were primarily driven by high docosahexaenoic acid content relative to zooplankton size fractions. For other essential compounds including arachidonic, α-linolenic and eicosapentaenoic FAs, veligers consistently ranked the lowest. These results demonstrate veligers to be of lower caloric content relative to zooplankton, especially compared to similarly sized 64–150 <i>μ</i>m planktonic biomass and of lower overall nutritional quality with respect to fatty acid composition. This study provides benchmarks regarding the overall nutritional quality of veligers and furthers our understanding energy and nutrient availability among the lower trophic levels of food webs in invaded ecosystems.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 2","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-02-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146215843","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Man Xiao, Michele A. Burford, Marieke A. Frassl, Anusuya Willis, Melanie E. Roberts, David P. Hamilton
Diazotrophic cyanobacteria, including those responsible for harmful algal blooms, fix atmospheric dinitrogen (N2) to sustain growth when they are limited by dissolved inorganic nitrogen (DIN) supply. Conventional models fail to accurately predict the timing and magnitude of N2 fixation, partly because of oversimplified assumptions about diazotrophic species responses to N. We hypothesized that cellular carbon (C) and N would co-vary with DIN availability, and cellular N quota reduced below a critical threshold would trigger heterocyst differentiation and N2 fixation. Conversely, we hypothesized that heterocysts would be discarded, and N2 fixation would cease at another higher cellular N quota threshold. To test this hypothesis, we undertook experiments to provide data to calibrate a model of cellular C and N of N2 fixation in the cyanobacterium Raphidiopsis raciborskii. The model incorporated internal N quotas, external DIN supply and a time lag for N2 fixation as key regulators of heterocyst production and N2 fixation, explaining > 70% of the variation in measured cellular N and C : N molar ratios. Heterocysts were predicted to form at a cellular N quota of 0.085 mg N mg−1 C and were discarded from filaments at 0.275 mg N mg−1 C. There was a 5-d time lag between DIN deprivation and initiation of N2 fixation. Continuous DIN supply was predicted to enhance N2 fixation more than an equivalent one-off pulse. Our study highlighted the need to consider cellular N and N supply regimes in driving N2 fixation to provide more accurate predictions of the response of cyanobacteria to DIN availability.
重氮营养蓝藻,包括那些造成有害藻华的蓝藻,当它们受到溶解的无机氮(DIN)供应的限制时,会固定大气中的氮(n2)来维持生长。传统模型无法准确预测n2固定的时间和幅度,部分原因是对重氮营养物种对N的反应的假设过于简化。我们假设细胞碳(C)和N会随着DIN的可用性而变化,并且细胞N配额低于临界阈值将触发异囊分化和n2固定。相反,我们假设异囊将被丢弃,并且在另一个更高的细胞N配额阈值时,n2固定将停止。为了验证这一假设,我们进行了实验,以提供数据来校准蓝藻Raphidiopsis raciborskii的细胞C和N的n2固定模型。该模型将内部N配额、外部DIN供应和氮素固定的时间滞后作为异囊产生和氮素固定的关键调节因素,解释了所测细胞N和C: N摩尔比70%的变化。预计异囊在细胞氮配额为0.085 mg N mg−1 C时形成,并在0.275 mg N mg−1 C时从细丝中丢弃。从DIN剥夺到开始氮固定之间有5天的滞后时间。预计连续的DIN供应比等效的一次性脉冲更能增强氮的固定。我们的研究强调需要考虑细胞氮和氮供应制度,以驱动氮固定,以提供更准确的预测蓝藻对DIN可用性的反应。
{"title":"Nitrogen fixation is driven by cellular nitrogen stores in a diazotrophic cyanobacterium: Evidence from culture experiments and model validation","authors":"Man Xiao, Michele A. Burford, Marieke A. Frassl, Anusuya Willis, Melanie E. Roberts, David P. Hamilton","doi":"10.1002/lno.70326","DOIUrl":"10.1002/lno.70326","url":null,"abstract":"<p>Diazotrophic cyanobacteria, including those responsible for harmful algal blooms, fix atmospheric dinitrogen (N<sub>2</sub>) to sustain growth when they are limited by dissolved inorganic nitrogen (DIN) supply. Conventional models fail to accurately predict the timing and magnitude of N<sub>2</sub> fixation, partly because of oversimplified assumptions about diazotrophic species responses to N. We hypothesized that cellular carbon (C) and N would co-vary with DIN availability, and cellular N quota reduced below a critical threshold would trigger heterocyst differentiation and N<sub>2</sub> fixation. Conversely, we hypothesized that heterocysts would be discarded, and N<sub>2</sub> fixation would cease at another higher cellular N quota threshold. To test this hypothesis, we undertook experiments to provide data to calibrate a model of cellular C and N of N<sub>2</sub> fixation in the cyanobacterium <i>Raphidiopsis raciborskii</i>. The model incorporated internal N quotas, external DIN supply and a time lag for N<sub>2</sub> fixation as key regulators of heterocyst production and N<sub>2</sub> fixation, explaining > 70% of the variation in measured cellular N and C : N molar ratios. Heterocysts were predicted to form at a cellular N quota of 0.085 mg N mg<sup>−1</sup> C and were discarded from filaments at 0.275 mg N mg<sup>−1</sup> C. There was a 5-d time lag between DIN deprivation and initiation of N<sub>2</sub> fixation. Continuous DIN supply was predicted to enhance N<sub>2</sub> fixation more than an equivalent one-off pulse. Our study highlighted the need to consider cellular N and N supply regimes in driving N<sub>2</sub> fixation to provide more accurate predictions of the response of cyanobacteria to DIN availability.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 2","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-02-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146215841","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Stephanie I. Anderson, Gayantonia Franzè, Joshua D. Kling, Paul Wilburn, Colin T. Kremer, Susanne Menden-Deuer, Elena Litchman, David A. Hutchins, Tatiana A. Rynearson
The significant contribution of phytoplankton to global primary production is regulated by several abiotic and biotic factors, which are often difficult to account for in natural systems. To address these challenges, we perturbed a summer plankton community from Narragansett Bay, Rhode Island, USA, by manipulating the temperature and nutrient conditions in a controlled short-term incubation experiment and tracked changes in phytoplankton community structure in response to fluctuations in phytoplankton physiology and microzooplankton grazing. Water was incubated at the in situ temperature (22°C) and at deviations from that temperature (± 4°C) with both macronutrient amendments (N, P, and Si addition) and unamended controls. We found nutrient availability and microzooplankton grazing to have pronounced and opposite impacts on phytoplankton size composition, with nutrient amendments shifting the phytoplankton community toward larger cells and grazing rates correlated with smaller phytoplankton communities and low-nutrient conditions. Nutrient amendments also altered cellular elemental ratios by increasing chlorophyll : C. Conversely, temperature was not found to have a direct impact on size or elemental stoichiometry, but did influence community composition. These findings paralleled prior observations from lab and field studies in Narragansett Bay which together suggest that over shorter timescales, nutrient availability may have a greater impact on phytoplankton community composition than temperature or grazing, altering phytoplankton nutritional value for higher trophic levels and as a result, secondary production. Thus, understanding underlying nutrient dynamics will be necessary to decipher how short-term changes in temperature or grazing may impact phytoplankton communities and the ecosystems they support.
{"title":"Nutrient availability modulates impacts of short-term shifts in temperature and grazing on phytoplankton composition and size structure","authors":"Stephanie I. Anderson, Gayantonia Franzè, Joshua D. Kling, Paul Wilburn, Colin T. Kremer, Susanne Menden-Deuer, Elena Litchman, David A. Hutchins, Tatiana A. Rynearson","doi":"10.1002/lno.70322","DOIUrl":"10.1002/lno.70322","url":null,"abstract":"<p>The significant contribution of phytoplankton to global primary production is regulated by several abiotic and biotic factors, which are often difficult to account for in natural systems. To address these challenges, we perturbed a summer plankton community from Narragansett Bay, Rhode Island, USA, by manipulating the temperature and nutrient conditions in a controlled short-term incubation experiment and tracked changes in phytoplankton community structure in response to fluctuations in phytoplankton physiology and microzooplankton grazing. Water was incubated at the in situ temperature (22°C) and at deviations from that temperature (± 4°C) with both macronutrient amendments (N, P, and Si addition) and unamended controls. We found nutrient availability and microzooplankton grazing to have pronounced and opposite impacts on phytoplankton size composition, with nutrient amendments shifting the phytoplankton community toward larger cells and grazing rates correlated with smaller phytoplankton communities and low-nutrient conditions. Nutrient amendments also altered cellular elemental ratios by increasing chlorophyll : C. Conversely, temperature was not found to have a direct impact on size or elemental stoichiometry, but did influence community composition. These findings paralleled prior observations from lab and field studies in Narragansett Bay which together suggest that over shorter timescales, nutrient availability may have a greater impact on phytoplankton community composition than temperature or grazing, altering phytoplankton nutritional value for higher trophic levels and as a result, secondary production. Thus, understanding underlying nutrient dynamics will be necessary to decipher how short-term changes in temperature or grazing may impact phytoplankton communities and the ecosystems they support.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 2","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://aslopubs.onlinelibrary.wiley.com/doi/epdf/10.1002/lno.70322","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146122085","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Maja Ilić, Sina Brehm, Maria Stockenreiter, Eric von Elert, Patrick Fink
The trophic transfer efficiency at the pelagic phytoplankton-zooplankton interface is—among other factors—governed by the dietary availability of polyunsaturated fatty acids (PUFAs) to herbivorous zooplankton. As most zooplankton taxa cannot synthesize PUFAs de novo, the phytoplankton PUFA composition is crucial for the herbivores' fitness. As PUFA synthesis is taxon-specific in phytoplankton, alterations in phytoplankton biodiversity lead to changes in the phytoplankton trait “nutritional quality” and can thus be expected to affect the relative fitness and intraspecific competition of herbivore populations. To study this potentially important link between producer diversity and consumer competitive interactions, we performed a freshwater mesocosm experiment with diversity-manipulated natural phytoplankton communities and naturally coexisting Daphnia longispina genotypes. We found that phytoplankton diversity is correlated with its PUFA composition, suggesting that a biodiversity loss on the primary producer level leads to decreased PUFA diversity and ultimately reduced dietary quality for consumers. This change in dietary PUFA availability further affected competitive interactions between co-occurring D. longispina genotypes, which was most evident for the ω3-PUFA α-linolenic acid (18:3 n-3) and the ω6-PUFA arachidonic acid (20:4 n-6). Interestingly, these two PUFAs had opposite effects on competition by favoring different genotypes. Our study thus demonstrates that phytoplankton PUFA content is a trait that affects consumers' functional traits and therefore represents a potential link between biodiversity and competition in aquatic herbivores.
{"title":"Essential dietary fatty acids affect intraspecific competition in herbivorous zooplankton","authors":"Maja Ilić, Sina Brehm, Maria Stockenreiter, Eric von Elert, Patrick Fink","doi":"10.1002/lno.70321","DOIUrl":"10.1002/lno.70321","url":null,"abstract":"<p>The trophic transfer efficiency at the pelagic phytoplankton-zooplankton interface is—among other factors—governed by the dietary availability of polyunsaturated fatty acids (PUFAs) to herbivorous zooplankton. As most zooplankton taxa cannot synthesize PUFAs de novo, the phytoplankton PUFA composition is crucial for the herbivores' fitness. As PUFA synthesis is taxon-specific in phytoplankton, alterations in phytoplankton biodiversity lead to changes in the phytoplankton trait “nutritional quality” and can thus be expected to affect the relative fitness and intraspecific competition of herbivore populations. To study this potentially important link between producer diversity and consumer competitive interactions, we performed a freshwater mesocosm experiment with diversity-manipulated natural phytoplankton communities and naturally coexisting <i>Daphnia longispina</i> genotypes. We found that phytoplankton diversity is correlated with its PUFA composition, suggesting that a biodiversity loss on the primary producer level leads to decreased PUFA diversity and ultimately reduced dietary quality for consumers. This change in dietary PUFA availability further affected competitive interactions between co-occurring <i>D. longispina</i> genotypes, which was most evident for the ω3-PUFA α-linolenic acid (18:3 n-3) and the ω6-PUFA arachidonic acid (20:4 n-6). Interestingly, these two PUFAs had opposite effects on competition by favoring different genotypes. Our study thus demonstrates that phytoplankton PUFA content is a trait that affects consumers' functional traits and therefore represents a potential link between biodiversity and competition in aquatic herbivores.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://aslopubs.onlinelibrary.wiley.com/doi/epdf/10.1002/lno.70321","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146048245","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Sabine Keuter, Gil Koplovitz, Maayan Ben Yehouda, Sivan Klaiman, Miguel J. Frada
Coccolithophores are abundant marine microalgae that produce a cell cover (coccosphere) composed of calcium carbonate platelets (coccoliths), and that play a unique role in the global carbon cycle. Gephyrocapsa huxleyi is the most prevalent coccolithophore in the oceans. Experiments in vitro indicate that the coccosphere size in G. huxleyi increases or decreases during phosphorus (P) or nitrogen (N) deprivation, respectively. To test whether coccosphere size variation occurs in native populations and relates to specific macronutrient availability, we examined communities at the open sea “station A” in the Gulf of Aqaba, northern Red Sea, and at the open sea station THEMO-2 in the Eastern Mediterranean Sea. At station A, the average diameter of G. huxleyi coccospheres was larger during the stratified, oligotrophic season (6.98 ± 1.29 μm), and smaller during the mesotrophic winter (6.16 ± 1.04 μm), and along the deep-chlorophyll maximum during stratified periods (6.36 ± 1.09 μm). A similar seasonal variation in coccosphere diameter was observed in the sister species Gephyrocapsa ericsonii. Complementary bioassays indicate that G. huxleyi was primarily P-limited during the stratified period, while non-limited or weakly P-limited in winter. The seasonal pattern in G. huxleyi diameter was the opposite at the Mediterranean THEMO-2 station. Larger coccospheres were detected in winter and smaller ones during summer. However, this pattern coincided with the prevalent patterns of inorganic macronutrient availability in the Eastern Mediterranean. Therefore, inorganic phosphorus availability is a key driver of coccosphere size variations in marine ecosystems.
{"title":"Phosphorus limitation drives seasonal enlargement of the coccosphere size in two coccolithophores","authors":"Sabine Keuter, Gil Koplovitz, Maayan Ben Yehouda, Sivan Klaiman, Miguel J. Frada","doi":"10.1002/lno.70323","DOIUrl":"10.1002/lno.70323","url":null,"abstract":"<p>Coccolithophores are abundant marine microalgae that produce a cell cover (coccosphere) composed of calcium carbonate platelets (coccoliths), and that play a unique role in the global carbon cycle. <i>Gephyrocapsa huxleyi</i> is the most prevalent coccolithophore in the oceans. Experiments in vitro indicate that the coccosphere size in <i>G. huxleyi</i> increases or decreases during phosphorus (P) or nitrogen (N) deprivation, respectively. To test whether coccosphere size variation occurs in native populations and relates to specific macronutrient availability, we examined communities at the open sea “station A” in the Gulf of Aqaba, northern Red Sea, and at the open sea station THEMO-2 in the Eastern Mediterranean Sea. At station A, the average diameter of <i>G. huxleyi</i> coccospheres was larger during the stratified, oligotrophic season (6.98 ± 1.29 <i>μ</i>m), and smaller during the mesotrophic winter (6.16 ± 1.04 <i>μ</i>m), and along the deep-chlorophyll maximum during stratified periods (6.36 ± 1.09 <i>μ</i>m). A similar seasonal variation in coccosphere diameter was observed in the sister species <i>Gephyrocapsa ericsonii</i>. Complementary bioassays indicate that <i>G. huxleyi</i> was primarily P-limited during the stratified period, while non-limited or weakly P-limited in winter. The seasonal pattern in <i>G. huxleyi</i> diameter was the opposite at the Mediterranean THEMO-2 station. Larger coccospheres were detected in winter and smaller ones during summer. However, this pattern coincided with the prevalent patterns of inorganic macronutrient availability in the Eastern Mediterranean. Therefore, inorganic phosphorus availability is a key driver of coccosphere size variations in marine ecosystems.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://aslopubs.onlinelibrary.wiley.com/doi/epdf/10.1002/lno.70323","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146033592","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Lauren E. Manck, Miranda Herschel Seixas, Rhea K. Foreman, Jingxuan Li, Benedetto Barone, Randelle M. Bundy, Daniel J. Repeta, David M. Karl, Matthew J. Church
The metabolism of heterotrophic bacteria acts as a key control on the turnover of organic matter in the ocean. However, much remains unknown about how nutrient availability, particularly iron concentration, impacts bacterial growth. In the dimly lit waters of the lower photic and upper mesopelagic zones, the attenuation of sinking particulate flux is intense, due in part to remineralization by heterotrophic bacteria. In the North Pacific Subtropical Gyre, dissolved iron concentrations display a subsurface minimum near the base of the photic zone, and this is also a region where bacteria have elevated cellular iron demands. In a series of field experiments, we examined how the availability of iron, nitrogen, and organic carbon impacts bacterial metabolism in the lower photic zone. Results of these experiments suggest that low iron conditions limit the turnover of organic carbon by bacteria, potentially enhancing the efficiency of organic carbon export to the deep sea. Uptake of both dissolved iron and inorganic nitrogen by heterotrophic bacteria was greatest when bacteria metabolized carbon-rich organic substrates, typical of the lower photic zone, compared to particulate material collected in the near-surface ocean. Vertical changes in the composition of organic matter may be an important control on bacterial cellular iron requirements, potentially pushing this community toward iron limitation in the interior waters of the ocean.
{"title":"Tightly coupled carbon, nitrogen, and iron utilization by bacteria in the lower photic zone of the North Pacific Subtropical Gyre","authors":"Lauren E. Manck, Miranda Herschel Seixas, Rhea K. Foreman, Jingxuan Li, Benedetto Barone, Randelle M. Bundy, Daniel J. Repeta, David M. Karl, Matthew J. Church","doi":"10.1002/lno.70317","DOIUrl":"10.1002/lno.70317","url":null,"abstract":"<p>The metabolism of heterotrophic bacteria acts as a key control on the turnover of organic matter in the ocean. However, much remains unknown about how nutrient availability, particularly iron concentration, impacts bacterial growth. In the dimly lit waters of the lower photic and upper mesopelagic zones, the attenuation of sinking particulate flux is intense, due in part to remineralization by heterotrophic bacteria. In the North Pacific Subtropical Gyre, dissolved iron concentrations display a subsurface minimum near the base of the photic zone, and this is also a region where bacteria have elevated cellular iron demands. In a series of field experiments, we examined how the availability of iron, nitrogen, and organic carbon impacts bacterial metabolism in the lower photic zone. Results of these experiments suggest that low iron conditions limit the turnover of organic carbon by bacteria, potentially enhancing the efficiency of organic carbon export to the deep sea. Uptake of both dissolved iron and inorganic nitrogen by heterotrophic bacteria was greatest when bacteria metabolized carbon-rich organic substrates, typical of the lower photic zone, compared to particulate material collected in the near-surface ocean. Vertical changes in the composition of organic matter may be an important control on bacterial cellular iron requirements, potentially pushing this community toward iron limitation in the interior waters of the ocean.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://aslopubs.onlinelibrary.wiley.com/doi/epdf/10.1002/lno.70317","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146033590","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jana Tischer, Moritz F. Lehmann, Guangyi Su, Fabio Lepori, Jakob Zopfi
Organotrophic denitrification is an important nitrogen (N) removal process in lakes, but alternative N reduction processes such as lithotrophic sulfur (S)-oxidizing denitrification may be greatly underappreciated. We studied the redox transition zone (RTZ) in the meromictic water column of the North Basin of Lake Lugano (Switzerland) to characterize N transformation pathways coupled to the S and carbon (C) cycles. Incubations with 15N-labeled and unlabeled nitrate (NO3−) revealed low denitrification rates and a general limitation of organic electron donors. The most accessible fractions of exported primary production biomass may have been largely consumed in the oxic water column during sedimentation and did not reach the RTZ at ~ 100 m depth. Conversely, sulfide (H2S) and methane (CH4), major end products of anaerobic degradation of the more recalcitrant organic carbon fractions in the sediment, represent a continuous source of energy to the RTZ, fostering the establishment of a community of S- and CH4-dependent NO3− reducers, dominated by Sulfuritalea and Candidatus Methylomirabilis over several years of observation. Anoxic incubation experiments with H2S amendments revealed a strong stimulation of dissimilatory NO3− reduction to ammonium (NH4+) (DNRA), but not denitrification. High relative abundances of the archaeal NH4+ oxidizer Candidatus Nitrosopumilus and bacterial nitrifiers indicate intense NO3− regeneration by nitrification in the upper RTZ. The potential interaction between nitrification and S-driven DNRA is unclear. However, their co-occurrence suggests that, at least under conditions of carbon limitation, N recycling between the NO3− and ammonium pools predominates over N removal via complete denitrification.
{"title":"Microbial nitrogen removal and recycling in the redox transition zone of a meromictic lake and its coupling to sulfur cycling","authors":"Jana Tischer, Moritz F. Lehmann, Guangyi Su, Fabio Lepori, Jakob Zopfi","doi":"10.1002/lno.70315","DOIUrl":"10.1002/lno.70315","url":null,"abstract":"<p>Organotrophic denitrification is an important nitrogen (N) removal process in lakes, but alternative N reduction processes such as lithotrophic sulfur (S)-oxidizing denitrification may be greatly underappreciated. We studied the redox transition zone (RTZ) in the meromictic water column of the North Basin of Lake Lugano (Switzerland) to characterize N transformation pathways coupled to the S and carbon (C) cycles. Incubations with <sup>15</sup>N-labeled and unlabeled nitrate (NO<sub>3</sub><sup>−</sup>) revealed low denitrification rates and a general limitation of organic electron donors. The most accessible fractions of exported primary production biomass may have been largely consumed in the oxic water column during sedimentation and did not reach the RTZ at ~ 100 m depth. Conversely, sulfide (H<sub>2</sub>S) and methane (CH<sub>4</sub>), major end products of anaerobic degradation of the more recalcitrant organic carbon fractions in the sediment, represent a continuous source of energy to the RTZ, fostering the establishment of a community of S- and CH<sub>4</sub>-dependent NO<sub>3</sub><sup>−</sup> reducers, dominated by <i>Sulfuritalea</i> and <i>Candidatus</i> Methylomirabilis over several years of observation. Anoxic incubation experiments with H<sub>2</sub>S amendments revealed a strong stimulation of dissimilatory NO<sub>3</sub><sup>−</sup> reduction to ammonium (NH<sub>4</sub><sup>+</sup>) (DNRA), but not denitrification. High relative abundances of the archaeal NH<sub>4</sub><sup>+</sup> oxidizer <i>Candidatus</i> Nitrosopumilus and bacterial nitrifiers indicate intense NO<sub>3</sub><sup>−</sup> regeneration by nitrification in the upper RTZ. The potential interaction between nitrification and S-driven DNRA is unclear. However, their co-occurrence suggests that, at least under conditions of carbon limitation, N recycling between the NO<sub>3</sub><sup>−</sup> and ammonium pools predominates over N removal via complete denitrification.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://aslopubs.onlinelibrary.wiley.com/doi/epdf/10.1002/lno.70315","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146001426","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Shasha Song, Kemeng Wang, Hao Wang, Wentao Wu, Chao Song
Coastal wetlands are critical in global carbon sequestration, but their biogeochemical cycling is highly sensitive to sediment mixing. Here, we quantified the impacts of storm-induced mixing on organic carbon (OC) storage across China's coastal wetlands using multiple radionuclides and machine learning (SHAP model). Field observations and SHAP results identified the storm surge as a key driver of sediment mixing, whose impact weakens with increasing offshore distance and vegetation cover. The vegetated, supratidal site in the Yellow River estuary wetland was less affected by the storm surge with a sediment mixing depth of only 18 cm. Sediment mixing was observed at 80% of stations from the literature in China's coastal wetlands, mainly driven by river discharge and waves. Furthermore, a negative correlation between sediment mixing depth and soil organic carbon (SOC) density (r = −0.42) in the top meter was found. For regions with SOC density > 5 kg m−2, the depths of sediment mixing are lower than 40 cm. Under the medium-forcing scenario SSP2-4.5 and the high-forcing scenario SSP5-8.5, the average sediment mixing depth in China's coastal wetlands is expected to increase by 19% and 28% by 2100, leading to corresponding declines in SOC density of 2.5% and 3.5%. The findings show that intensified sediment mixing caused by climate warming will weaken the carbon storage capacity of coastal wetlands, providing a crucial scientific basis for the sustainable management of coastal wetlands and the formulation of carbon sink enhancement strategies.
海岸带湿地在全球固碳中起着至关重要的作用,但其生物地球化学循环对泥沙混合非常敏感。在这里,我们使用多放射性核素和机器学习(SHAP模型)量化了风暴引起的混合对中国沿海湿地有机碳(OC)储存的影响。野外观测和SHAP结果表明,风暴潮是沉积物混合的关键驱动因素,其影响随着离岸距离和植被覆盖的增加而减弱。黄河口湿地植被覆盖的潮上样地受风暴潮影响较小,泥沙混合深度仅为18 cm。中国滨海湿地80%的站点观测到泥沙混合,主要由河流流量和波浪驱动。表层混合深度与土壤有机碳(SOC)密度呈负相关(r = - 0.42)。在有机碳密度为5 kg m−2的区域,沉积物混合深度小于40 cm。在中等强迫情景SSP2‐4.5和高强迫情景SSP5‐8.5下,预计到2100年中国滨海湿地的平均泥沙混合深度将分别增加19%和28%,导致有机碳密度相应下降2.5%和3.5%。研究结果表明,气候变暖导致的泥沙混合加剧将削弱滨海湿地的碳储存能力,为滨海湿地的可持续管理和碳汇增强策略的制定提供了重要的科学依据。
{"title":"Sediment mixing impacts carbon storage in China's coastal wetlands: Evidence from multiple radiotracers","authors":"Shasha Song, Kemeng Wang, Hao Wang, Wentao Wu, Chao Song","doi":"10.1002/lno.70320","DOIUrl":"10.1002/lno.70320","url":null,"abstract":"<p>Coastal wetlands are critical in global carbon sequestration, but their biogeochemical cycling is highly sensitive to sediment mixing. Here, we quantified the impacts of storm-induced mixing on organic carbon (OC) storage across China's coastal wetlands using multiple radionuclides and machine learning (SHAP model). Field observations and SHAP results identified the storm surge as a key driver of sediment mixing, whose impact weakens with increasing offshore distance and vegetation cover. The vegetated, supratidal site in the Yellow River estuary wetland was less affected by the storm surge with a sediment mixing depth of only 18 cm. Sediment mixing was observed at 80% of stations from the literature in China's coastal wetlands, mainly driven by river discharge and waves. Furthermore, a negative correlation between sediment mixing depth and soil organic carbon (SOC) density (<i>r</i> = −0.42) in the top meter was found. For regions with SOC density > 5 kg m<sup>−2</sup>, the depths of sediment mixing are lower than 40 cm. Under the medium-forcing scenario SSP2-4.5 and the high-forcing scenario SSP5-8.5, the average sediment mixing depth in China's coastal wetlands is expected to increase by 19% and 28% by 2100, leading to corresponding declines in SOC density of 2.5% and 3.5%. The findings show that intensified sediment mixing caused by climate warming will weaken the carbon storage capacity of coastal wetlands, providing a crucial scientific basis for the sustainable management of coastal wetlands and the formulation of carbon sink enhancement strategies.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146001425","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Alessandra Mazzoli, Claudia Frey, Cameron M. Callbeck, Jakob Zopfi, Teresa Einzmann, Chiara Piantoni, Tim J. Paulus, Moritz F. Lehmann
Nitrification is a key process in the aquatic nitrogen (N) cycle, but its products, nitrate (NO3−) and nitrous oxide (N2O), contribute to eutrophication and greenhouse gas emissions, particularly in eutrophic lakes. Variations in in-lake N cycling and N2O production pathways, as a function of seasonality and artificial oxygenation, remain poorly understood. We investigated nitrification in the artificially oxygenated eutrophic Lake Baldegg, by analyzing NO3− and N2O concentrations and isotope ratios, and measuring ammonium oxidation rates via 15N tracer incubations over one year. An N isotope mass-balance model revealed that nitrification sustained only 5.3 ± 0.7% of total NO3− consumption in the epilimnion, where external N loadings were influential, and considerably more in the hypolimnion (81.6 ± 18.5%) during stratification. Dual NO3− isotope signatures (Δδ18O : Δδ15N ~ 1.5–1.73) and associated negative NO3− isotope anomalies confirmed epilimnetic nitrification, though external inputs partly obscured this signal. During stratification, relatively high hypolimnetic nitrification rates correlated with organic matter export, and seemed linked to sediment resuspension and artificial oxygenation. While sedimentary denitrification/DNRA dominated hypolimnetic NO3− reduction (with negligible effects on δ15N-NO3− and δ18O-NO3−), transient suboxic conditions enabled water column denitrification during stratification (24.1–30.2% of the total hypolimnetic denitrification). High N2O isotope site-preference values (30–35‰) confirmed hypolimnetic ammonium oxidation as the main N2O production pathway. During winter overturn, N2O transport from the hypolimnion caused epilimnetic N2O oversaturation and atmospheric emissions up to 3.52 μmol m−2 d−1. Comparison with other lakes suggests that artificial oxygenation enhances N turnover, manifesting in greater ambient N2O backgrounds and fluxes to the atmosphere.
{"title":"Isotopic constraints on active nitrification in a eutrophic artificially oxygenated lake: Implications for nitrate regeneration and nitrous oxide production","authors":"Alessandra Mazzoli, Claudia Frey, Cameron M. Callbeck, Jakob Zopfi, Teresa Einzmann, Chiara Piantoni, Tim J. Paulus, Moritz F. Lehmann","doi":"10.1002/lno.70281","DOIUrl":"10.1002/lno.70281","url":null,"abstract":"<p>Nitrification is a key process in the aquatic nitrogen (N) cycle, but its products, nitrate (NO<sub>3</sub><sup>−</sup>) and nitrous oxide (N<sub>2</sub>O), contribute to eutrophication and greenhouse gas emissions, particularly in eutrophic lakes. Variations in in-lake N cycling and N<sub>2</sub>O production pathways, as a function of seasonality and artificial oxygenation, remain poorly understood. We investigated nitrification in the artificially oxygenated eutrophic Lake Baldegg, by analyzing NO<sub>3</sub><sup>−</sup> and N<sub>2</sub>O concentrations and isotope ratios, and measuring ammonium oxidation rates via <sup>15</sup>N tracer incubations over one year. An N isotope mass-balance model revealed that nitrification sustained only 5.3 ± 0.7% of total NO<sub>3</sub><sup>−</sup> consumption in the epilimnion, where external N loadings were influential, and considerably more in the hypolimnion (81.6 ± 18.5%) during stratification. Dual NO<sub>3</sub><sup>−</sup> isotope signatures (Δδ<sup>18</sup>O : Δδ<sup>15</sup>N ~ 1.5–1.73) and associated negative NO<sub>3</sub><sup>−</sup> isotope anomalies confirmed epilimnetic nitrification, though external inputs partly obscured this signal. During stratification, relatively high hypolimnetic nitrification rates correlated with organic matter export, and seemed linked to sediment resuspension and artificial oxygenation. While sedimentary denitrification/DNRA dominated hypolimnetic NO<sub>3</sub><sup>−</sup> reduction (with negligible effects on δ<sup>15</sup>N-NO<sub>3</sub><sup>−</sup> and δ<sup>18</sup>O-NO<sub>3</sub><sup>−</sup>), transient suboxic conditions enabled water column denitrification during stratification (24.1–30.2% of the total hypolimnetic denitrification). High N<sub>2</sub>O isotope site-preference values (30–35‰) confirmed hypolimnetic ammonium oxidation as the main N<sub>2</sub>O production pathway. During winter overturn, N<sub>2</sub>O transport from the hypolimnion caused epilimnetic N<sub>2</sub>O oversaturation and atmospheric emissions up to 3.52 <i>μ</i>mol m<sup>−2</sup> d<sup>−1</sup>. Comparison with other lakes suggests that artificial oxygenation enhances N turnover, manifesting in greater ambient N<sub>2</sub>O backgrounds and fluxes to the atmosphere.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://aslopubs.onlinelibrary.wiley.com/doi/epdf/10.1002/lno.70281","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145993341","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}