Fereshteh Hemmateenejad, Luca Fallati, Giuliana Panieri, Pedro A. Ribeiro, Bénédicte Ferré, Francesca Schivalocchi, Chiara Fusca, Alessandra Savini
Cold seeps are biodiversity hotspots that significantly affect sediment geochemistry in marine environments. Although seepage-driven substrate modifications are ecologically significant, their interactions with benthic community structure remain poorly understood. This knowledge gap largely reflects the challenge of obtaining high-resolution seafloor data to capture the fine-scale organisms-substrate relationships. Here, we used high-resolution seafloor imagery to investigate a seepage area offshore northern Svalbard (~ 150 m of water depth). Two orthomosaics (spanning ~ 2261 m2 and generated through photogrammetry applied to underwater videos collected using a remotely operated vehicle) were analyzed to classify visible epibenthic fauna and describe seafloor substrate changes. Epibenthic fauna was annotated to the lowest possible taxonomic level, while object-based image analysis facilitated a quantitative and repeatable classification of substrates into four distinct classes. Integrating faunal and substrate data allowed us to quantify community patterns relative to seafloor morphometric parameters. The network plot revealed substrate class similarities and faunal colonization preferences, particularly where methane-derived authigenic carbonates are present. Our results demonstrate that seep-associated substrates play a crucial role in shaping benthic community structure. However, methane-derived authigenic carbonate formation further amplifies these effects, although its relationship with specific sediment types (e.g., coarse- or fine-grained) remains unclear. This study demonstrates a robust framework for future ecological assessments of seep environments, emphasizing the interplay between gas seepage, sedimentological attributes, and their combined impact on benthic community structure.
{"title":"Seafloor-image analysis techniques to highlight the role of substrate as a driver of benthic community structure in Arctic cold seep areas","authors":"Fereshteh Hemmateenejad, Luca Fallati, Giuliana Panieri, Pedro A. Ribeiro, Bénédicte Ferré, Francesca Schivalocchi, Chiara Fusca, Alessandra Savini","doi":"10.1002/lno.70312","DOIUrl":"10.1002/lno.70312","url":null,"abstract":"<p>Cold seeps are biodiversity hotspots that significantly affect sediment geochemistry in marine environments. Although seepage-driven substrate modifications are ecologically significant, their interactions with benthic community structure remain poorly understood. This knowledge gap largely reflects the challenge of obtaining high-resolution seafloor data to capture the fine-scale organisms-substrate relationships. Here, we used high-resolution seafloor imagery to investigate a seepage area offshore northern Svalbard (~ 150 m of water depth). Two orthomosaics (spanning ~ 2261 m<sup>2</sup> and generated through photogrammetry applied to underwater videos collected using a remotely operated vehicle) were analyzed to classify visible epibenthic fauna and describe seafloor substrate changes. Epibenthic fauna was annotated to the lowest possible taxonomic level, while object-based image analysis facilitated a quantitative and repeatable classification of substrates into four distinct classes. Integrating faunal and substrate data allowed us to quantify community patterns relative to seafloor morphometric parameters. The network plot revealed substrate class similarities and faunal colonization preferences, particularly where methane-derived authigenic carbonates are present. Our results demonstrate that seep-associated substrates play a crucial role in shaping benthic community structure. However, methane-derived authigenic carbonate formation further amplifies these effects, although its relationship with specific sediment types (e.g., coarse- or fine-grained) remains unclear. This study demonstrates a robust framework for future ecological assessments of seep environments, emphasizing the interplay between gas seepage, sedimentological attributes, and their combined impact on benthic community structure.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145968331","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Tyler J. Butts, Robert A. Johnson, Michael J. Weber, Grace M. Wilkinson
In aquatic ecosystems, greater food web complexity is theorized to increase persistence and resilience of primary production to pulse disturbances, yet experimental evidence is limited. We simulated two storm-induced pulse disturbances by adding nutrients (~ 3%–5% increase in ambient concentrations) to three ponds with low, intermediate, and high food web complexity and compared to reference ponds. We evaluated the ecological stability of primary production by quantifying persistence as the number of days it took chlorophyll-a or ecosystem metabolism to deviate significantly from reference conditions and resilience as the time to recover to reference conditions following each disturbance. We also evaluated if a critical transition occurred following the disturbance. The high complexity pond did not significantly deviate from reference conditions following either nutrient pulse, suggesting high ecological stability. The intermediate complexity pond had lower stability, with persistence relatively consistent at 18 and 24 d after each nutrient pulse, and resilience trending toward a substantial increase from 23 d to less than a week before the experiment concluded. Stability was lowest in the low complexity pond where persistence decreased from 24 d to just 8 d and resilience decreased from 5 to 22 d. There was also evidence of a critical transition after the first pulse in the low complexity pond, but not for higher complexity ponds. This experiment provides strong support that food web connectivity and food chain length can aid in buffering aquatic ecosystems against increasing and intensifying by influencing persistence and resilience to repeated nutrient pulses.
{"title":"Food web complexity alters phytoplankton persistence and resilience to nutrient pulses in experimental ecosystems","authors":"Tyler J. Butts, Robert A. Johnson, Michael J. Weber, Grace M. Wilkinson","doi":"10.1002/lno.70319","DOIUrl":"10.1002/lno.70319","url":null,"abstract":"<p>In aquatic ecosystems, greater food web complexity is theorized to increase persistence and resilience of primary production to pulse disturbances, yet experimental evidence is limited. We simulated two storm-induced pulse disturbances by adding nutrients (~ 3%–5% increase in ambient concentrations) to three ponds with low, intermediate, and high food web complexity and compared to reference ponds. We evaluated the ecological stability of primary production by quantifying persistence as the number of days it took chlorophyll-<i>a</i> or ecosystem metabolism to deviate significantly from reference conditions and resilience as the time to recover to reference conditions following each disturbance. We also evaluated if a critical transition occurred following the disturbance. The high complexity pond did not significantly deviate from reference conditions following either nutrient pulse, suggesting high ecological stability. The intermediate complexity pond had lower stability, with persistence relatively consistent at 18 and 24 d after each nutrient pulse, and resilience trending toward a substantial increase from 23 d to less than a week before the experiment concluded. Stability was lowest in the low complexity pond where persistence decreased from 24 d to just 8 d and resilience decreased from 5 to 22 d. There was also evidence of a critical transition after the first pulse in the low complexity pond, but not for higher complexity ponds. This experiment provides strong support that food web connectivity and food chain length can aid in buffering aquatic ecosystems against increasing and intensifying by influencing persistence and resilience to repeated nutrient pulses.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://aslopubs.onlinelibrary.wiley.com/doi/epdf/10.1002/lno.70319","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145968642","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Lin Wei, Pinghe Cai, Qingquan Hong, Tong Wu, Wei Liu, Yilin Cheng, Pingping Mi
Sandy beaches are an important passage for the transport of various forms of nitrogen from land to sea. However, export fluxes of these forms of nitrogen and the mechanisms controlling their transformation remain elusive. Using the 224Ra/228Th disequilibrium approach, we estimated export fluxes of dissolved inorganic carbon and dissolved inorganic nitrogen at three intertidal sandy beaches with distinct slopes along the southeast China's coast. We identified that sandy beaches are a hotspot of nitrogen loss in the coastal ecosystem, with nitrogen removal rates reaching up to 87.1 mmolN m−2 d−1 and removal efficiencies varying between 7% and 82%. Notably, nitrogen removal rates peaked at intermediate seawater percolation fluxes, reflecting the optimal balance of oxygen consumption, marine organic matter remineralization, and nitrate production for fueling denitrification in the beach's interior. In addition, total nitrogen removal increased with beach slopes. This is likely due to the fact that steeper beaches facilitate seawater to percolate more efficiently into the beach's interior and travel along a longer flow path before it drains out, thus allowing denitrification to prevail. Overall, our field observations reveal that instead of the surface “skin circulation,” the “body circulation” system within an intertidal beach governs fluid transport and solute exchange between land and sea. We conclude that intertidal sandy beaches function as an efficient biogeochemical reactor, which attenuates anthropogenic nitrogen inputs to the coastal ocean.
{"title":"Rapid nitrogen removal in sandy beaches driven by periodic tidal inundations","authors":"Lin Wei, Pinghe Cai, Qingquan Hong, Tong Wu, Wei Liu, Yilin Cheng, Pingping Mi","doi":"10.1002/lno.70314","DOIUrl":"10.1002/lno.70314","url":null,"abstract":"<p>Sandy beaches are an important passage for the transport of various forms of nitrogen from land to sea. However, export fluxes of these forms of nitrogen and the mechanisms controlling their transformation remain elusive. Using the <sup>224</sup>Ra/<sup>228</sup>Th disequilibrium approach, we estimated export fluxes of dissolved inorganic carbon and dissolved inorganic nitrogen at three intertidal sandy beaches with distinct slopes along the southeast China's coast. We identified that sandy beaches are a hotspot of nitrogen loss in the coastal ecosystem, with nitrogen removal rates reaching up to 87.1 mmolN m<sup>−2</sup> d<sup>−1</sup> and removal efficiencies varying between 7% and 82%. Notably, nitrogen removal rates peaked at intermediate seawater percolation fluxes, reflecting the optimal balance of oxygen consumption, marine organic matter remineralization, and nitrate production for fueling denitrification in the beach's interior. In addition, total nitrogen removal increased with beach slopes. This is likely due to the fact that steeper beaches facilitate seawater to percolate more efficiently into the beach's interior and travel along a longer flow path before it drains out, thus allowing denitrification to prevail. Overall, our field observations reveal that instead of the surface “skin circulation,” the “body circulation” system within an intertidal beach governs fluid transport and solute exchange between land and sea. We conclude that intertidal sandy beaches function as an efficient biogeochemical reactor, which attenuates anthropogenic nitrogen inputs to the coastal ocean.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145968332","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Maria Elisabetta Santelia, Luisa Listmann, Stefanie Schnell, C.-Elisa Schaum
Predicting the effect of increased thermal unpredictability, for example in the shape of heatwaves on phytoplankton metabolic responses is ripe with challenges. While single genotypes in laboratory environments will respond to environmental fluctuations in predictable and repeatable ways, it is difficult to relate rapid evolutionary responses of whole communities to their ecological history. Previously experienced environments, including fluctuations therein, can shape an organism's specific niche as well as their responses to further environmental changes. This is a testable hypothesis as long as samples can be obtained where the environmental history is known, sufficiently diverse, and not obscured by confounding parameters such as day length and precipitation patterns. Here, we tested immediate (i.e., within one generation) metabolic temperature responses of natural phytoplankton assemblages from two thermally distinct regions in the Baltic Sea: the Kiel Area, characterized by higher thermal variability and thus lower thermal predictability, and the more thermally predictable Bornholm Basin. Our approach allows us to investigate effects on immediate physiological time scales (response curves), ecological and evolutionary processes on longer time scales (seasonal differences between basins) as well as mid-term responses during a natural occurring heatwave. We found evidence for a higher degree of phenotypic plasticity in samples from unpredictable environments (Kiel Area).
{"title":"Heatwaves and a history of variability shape phytoplankton community thermal responses within one generation","authors":"Maria Elisabetta Santelia, Luisa Listmann, Stefanie Schnell, C.-Elisa Schaum","doi":"10.1002/lno.70318","DOIUrl":"10.1002/lno.70318","url":null,"abstract":"<p>Predicting the effect of increased thermal unpredictability, for example in the shape of heatwaves on phytoplankton metabolic responses is ripe with challenges. While single genotypes in laboratory environments will respond to environmental fluctuations in predictable and repeatable ways, it is difficult to relate rapid evolutionary responses of whole communities to their ecological history. Previously experienced environments, including fluctuations therein, can shape an organism's specific niche as well as their responses to further environmental changes. This is a testable hypothesis as long as samples can be obtained where the environmental history is known, sufficiently diverse, and not obscured by confounding parameters such as day length and precipitation patterns. Here, we tested immediate (i.e., within one generation) metabolic temperature responses of natural phytoplankton assemblages from two thermally distinct regions in the Baltic Sea: the Kiel Area, characterized by higher thermal variability and thus lower thermal predictability, and the more thermally predictable Bornholm Basin. Our approach allows us to investigate effects on immediate physiological time scales (response curves), ecological and evolutionary processes on longer time scales (seasonal differences between basins) as well as mid-term responses during a natural occurring heatwave. We found evidence for a higher degree of phenotypic plasticity in samples from unpredictable environments (Kiel Area).</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://aslopubs.onlinelibrary.wiley.com/doi/epdf/10.1002/lno.70318","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145968330","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Eyal Geisler, Hagar Siebner, Max Kolton, Guy Sisma-Ventura, Eyal Rahav, Shai Arnon, Edo Bar-Zeev
Heterotrophic diazotrophs are potentially important to the nitrogen cycle in freshwater ecosystems, yet their abundance, N2 fixation rates, diversity, and association with aggregates remain poorly understood. This study elucidates the contribution of freshwater heterotrophic diazotrophs as free-living or aggregate-associated cells to total N2 fixation along the Jordan River-to-Lake Kinneret continuum. Heterotrophic diazotrophs ranged between 0.4 × 107 and 6.4 × 107 cells L−1, accounting for 25–56% of the total unicellular diazotrophs. N2 fixation rates by heterotrophic diazotrophs varied along the river (0.1–0.4 nmol N L−1 d−1), contributing between 38% and 100% of total N2 fixation. The rates were mostly ascribed to free-living heterotrophic diazotrophs upstream while attributed to those associated with aggregates downstream. Diazotrophs diversity indicated that non-cyanobacterial diazotrophs dominated the free-living fraction along different river locations, while cyanobacteria were mostly identified in lake water. Compared to aggregates-associated N2-fixers, the diversity of free-living diazotrophs was highly affected by environmental drivers, such as dissolved phosphorus, inorganic nitrogen, and water temperature. Our results highlight that freshwater heterotrophic diazotrophs are more ubiquitous than previously thought, can be found as free-living cells or associated with aggregates, significantly contributing to phytoplankton productivity.
{"title":"Heterotrophic diazotrophy along a river–lake continuum: Lifestyle and contribution to dinitrogen fixation","authors":"Eyal Geisler, Hagar Siebner, Max Kolton, Guy Sisma-Ventura, Eyal Rahav, Shai Arnon, Edo Bar-Zeev","doi":"10.1002/lno.70308","DOIUrl":"10.1002/lno.70308","url":null,"abstract":"<p>Heterotrophic diazotrophs are potentially important to the nitrogen cycle in freshwater ecosystems, yet their abundance, N<sub>2</sub> fixation rates, diversity, and association with aggregates remain poorly understood. This study elucidates the contribution of freshwater heterotrophic diazotrophs as free-living or aggregate-associated cells to total N<sub>2</sub> fixation along the Jordan River-to-Lake Kinneret continuum. Heterotrophic diazotrophs ranged between 0.4 × 10<sup>7</sup> and 6.4 × 10<sup>7</sup> cells L<sup>−1</sup>, accounting for 25–56% of the total unicellular diazotrophs. N<sub>2</sub> fixation rates by heterotrophic diazotrophs varied along the river (0.1–0.4 nmol N L<sup>−1</sup> d<sup>−1</sup>), contributing between 38% and 100% of total N<sub>2</sub> fixation. The rates were mostly ascribed to free-living heterotrophic diazotrophs upstream while attributed to those associated with aggregates downstream. Diazotrophs diversity indicated that non-cyanobacterial diazotrophs dominated the free-living fraction along different river locations, while cyanobacteria were mostly identified in lake water. Compared to aggregates-associated N<sub>2</sub>-fixers, the diversity of free-living diazotrophs was highly affected by environmental drivers, such as dissolved phosphorus, inorganic nitrogen, and water temperature. Our results highlight that freshwater heterotrophic diazotrophs are more ubiquitous than previously thought, can be found as free-living cells or associated with aggregates, significantly contributing to phytoplankton productivity.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://aslopubs.onlinelibrary.wiley.com/doi/epdf/10.1002/lno.70308","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145938105","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Over the past two centuries, anthropogenic stress and climate change have blurred understanding of their individual and combined impacts on lake ecosystems. This study analyzed 477 ecological shifts documented in 224 paleolimnological records from lakes to trace their responses to climate change and anthropogenic stressors over time. By classifying ecological shifts according to their primary drivers (anthropogenic stress, climatic change, or their combined effects), this study characterized how lake ecosystems respond to these pressures. Stress response analysis revealed that climate-driven responses predominated during post-Little Ice Age warming, whereas anthropogenic stress became the dominant factor by the early 20th century, accompanied by the onset of the 2nd Industrial Revolution. While the Great Acceleration initiated widespread ecological shifts in lakes globally through synergistic interactions between anthropogenic activities and climate change, anthropogenic stress may still exert a greater impact on these shifts than climate change. Spatial analysis revealed divergent responses across lake ecosystems across the globe, though representation was limited from the Southern Hemisphere and tropical regions. Temperate lakes are highly susceptible to anthropogenic stressors; Arctic lakes have heightened sensitivity to climate change; and alpine lakes have coupled responses to both drivers. The cumulative response index developed in this study isolates individual stressors temporally, revealing substantial impacts of historical human development on lake ecosystems. These effects leave persistent signatures preserved in sedimentary archives, providing new perspectives on drivers of ecological trajectories across temporal scales.
{"title":"Spatial variability of ecological shifts in lakes in response to anthropogenic activities and climate change over the past two centuries","authors":"Dinggui Wu, Yongge Sun","doi":"10.1002/lno.70316","DOIUrl":"10.1002/lno.70316","url":null,"abstract":"<p>Over the past two centuries, anthropogenic stress and climate change have blurred understanding of their individual and combined impacts on lake ecosystems. This study analyzed 477 ecological shifts documented in 224 paleolimnological records from lakes to trace their responses to climate change and anthropogenic stressors over time. By classifying ecological shifts according to their primary drivers (anthropogenic stress, climatic change, or their combined effects), this study characterized how lake ecosystems respond to these pressures. Stress response analysis revealed that climate-driven responses predominated during post-Little Ice Age warming, whereas anthropogenic stress became the dominant factor by the early 20<sup>th</sup> century, accompanied by the onset of the 2<sup>nd</sup> Industrial Revolution. While the Great Acceleration initiated widespread ecological shifts in lakes globally through synergistic interactions between anthropogenic activities and climate change, anthropogenic stress may still exert a greater impact on these shifts than climate change. Spatial analysis revealed divergent responses across lake ecosystems across the globe, though representation was limited from the Southern Hemisphere and tropical regions. Temperate lakes are highly susceptible to anthropogenic stressors; Arctic lakes have heightened sensitivity to climate change; and alpine lakes have coupled responses to both drivers. The cumulative response index developed in this study isolates individual stressors temporally, revealing substantial impacts of historical human development on lake ecosystems. These effects leave persistent signatures preserved in sedimentary archives, providing new perspectives on drivers of ecological trajectories across temporal scales.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145938065","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Tslil Bar, Ronen Alkalay, Michael Soukhanov, Natalia Belkin, Yoav Lehahn, Yishai Weinstein, Timor Katz, Barak Herut, Eyal Rahav, Ilana Berman-Frank
This study presents the first multi-year assessment quantifying the contribution of primary production to vertical carbon flux in the ultra-oligotrophic southeastern Levantine basin of the Mediterranean Sea. Depth-integrated (0–180 m) daily primary productivity (PP) was 25% higher in the mixed winter period than in the stratified period (123 and 98 mg C m−2 d−1 respectively) and the predominant photoautotrophs contributed ~ 5%–11% of the bulk particulate organic carbon (POC). Time-resolved sediment trap data at 180 and 280 m from 2016 to 2020 showed POC fluxes ranging from 0.5 to 5.3 mg C m−2 d−1 (stratified-period) and 1.8 to 13.5 mg C m−2 d−1 (mixed-period), with primary producers potentially contributing 2.6%–7% of the POC flux at 180 m. Our calculated e-ratios are some of the lowest recorded in oligotrophic environments, reaching 0.061 during mixing and 0.026 under stratified conditions. High bacterial-to-primary production ratios and bacterial coupling to dissolved organic carbon (DOC) suggest that intense microbial recycling constrains the transformation of primary production to particulate export and reduces the biological pump efficiency. Our data show that applying generalized export models can overestimate export in the Levantine basin by overlooking microbial recycling and lateral carbon transport, underscoring the need for region-specific models that incorporate these processes under increasingly warm, stratified, and oligotrophic ocean conditions.
本研究首次对地中海东南黎凡特极贫营养盆地的初级生产对垂直碳通量的贡献进行了多年量化评估。混合冬季的日初级生产力(PP)比分层冬季(分别为123和98 mg C m−2 d−1)高25%,主要的光自养生物贡献了约5%-11%的总颗粒有机碳(POC)。从2016年到2020年,180米和280米的时间分辨沉积物捕获数据显示,POC通量范围为0.5至5.3 mg C m−2 d−1(分层期)和1.8至13.5 mg C m−2 d−1(混合期),初级生产者可能贡献了180米POC通量的2.6%-7%。我们计算的e‐ratio是在少营养环境中记录的最低的,混合条件下达到0.061,分层条件下达到0.026。高细菌-初级生产比和细菌与溶解有机碳(DOC)的耦合表明,强烈的微生物循环限制了初级生产向颗粒出口的转变,降低了生物泵的效率。我们的数据表明,应用广义出口模型可能会高估黎凡特盆地的出口,因为它忽略了微生物循环和横向碳运输,这强调了在日益变暖、分层和少营养海洋条件下纳入这些过程的区域特定模型的必要性。
{"title":"Microbial-mediated recycling constrains the contribution of primary production to export flux in an oligotrophic system","authors":"Tslil Bar, Ronen Alkalay, Michael Soukhanov, Natalia Belkin, Yoav Lehahn, Yishai Weinstein, Timor Katz, Barak Herut, Eyal Rahav, Ilana Berman-Frank","doi":"10.1002/lno.70309","DOIUrl":"10.1002/lno.70309","url":null,"abstract":"<p>This study presents the first multi-year assessment quantifying the contribution of primary production to vertical carbon flux in the ultra-oligotrophic southeastern Levantine basin of the Mediterranean Sea. Depth-integrated (0–180 m) daily primary productivity (PP) was 25% higher in the mixed winter period than in the stratified period (123 and 98 mg C m<sup>−2</sup> d<sup>−1</sup> respectively) and the predominant photoautotrophs contributed ~ 5%–11% of the bulk particulate organic carbon (POC). Time-resolved sediment trap data at 180 and 280 m from 2016 to 2020 showed POC fluxes ranging from 0.5 to 5.3 mg C m<sup>−2</sup> d<sup>−1</sup> (stratified-period) and 1.8 to 13.5 mg C m<sup>−2</sup> d<sup>−1</sup> (mixed-period), with primary producers potentially contributing 2.6%–7% of the POC flux at 180 m. Our calculated e-ratios are some of the lowest recorded in oligotrophic environments, reaching 0.061 during mixing and 0.026 under stratified conditions. High bacterial-to-primary production ratios and bacterial coupling to dissolved organic carbon (DOC) suggest that intense microbial recycling constrains the transformation of primary production to particulate export and reduces the biological pump efficiency. Our data show that applying generalized export models can overestimate export in the Levantine basin by overlooking microbial recycling and lateral carbon transport, underscoring the need for region-specific models that incorporate these processes under increasingly warm, stratified, and oligotrophic ocean conditions.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://aslopubs.onlinelibrary.wiley.com/doi/epdf/10.1002/lno.70309","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145938066","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Alice M. Carter, Michael J. Vlah, Robert O. Hall Jr., Emily S. Bernhardt
Rivers transform and transport much of the organic input they receive from terrestrial ecosystems. This carbon sustains stream food webs and fuels the production and release of carbon dioxide and methane to the atmosphere. Warming water temperatures and intensification of the hydrologic cycle due to climate change are likely to affect these carbon transformations and downstream transport in streams. Here, we examine the natural variability and long-term shifts in the metabolism of New Hope Creek, North Carolina, USA, site of the earliest published estimates of a stream's annual metabolic regime in 1969. We estimated annual ecosystem metabolism over 3 yr (2017–2020) and used the variability observed in the modern dataset to provide context for interpreting long-term change in response to climate drivers. We found that New Hope Creek was heterotrophic in all years, with highly seasonal carbon cycling. Much of the modern variability can be explained by water temperature and flow conditions. Warmer temperatures and longer periods of low flow conditions led to faster carbon cycling and increased heterotrophy, while autumn floods suppressed annual ecosystem respiration by reducing river carbon stocks. Comparing modern estimates to those from 50 yr ago, we find that New Hope Creek is now substantially warmer and has higher metabolic fluxes. Despite the limitations of inferring trends between two distant time points, we use modern data to hindcast metabolism and show how climate change has likely accelerated carbon cycling and shortened carbon residence time in New Hope Creek.
{"title":"Accelerated carbon cycling after 50 years of warming and increasing hydrologic variability in a temperate stream","authors":"Alice M. Carter, Michael J. Vlah, Robert O. Hall Jr., Emily S. Bernhardt","doi":"10.1002/lno.70313","DOIUrl":"10.1002/lno.70313","url":null,"abstract":"<p>Rivers transform and transport much of the organic input they receive from terrestrial ecosystems. This carbon sustains stream food webs and fuels the production and release of carbon dioxide and methane to the atmosphere. Warming water temperatures and intensification of the hydrologic cycle due to climate change are likely to affect these carbon transformations and downstream transport in streams. Here, we examine the natural variability and long-term shifts in the metabolism of New Hope Creek, North Carolina, USA, site of the earliest published estimates of a stream's annual metabolic regime in 1969. We estimated annual ecosystem metabolism over 3 yr (2017–2020) and used the variability observed in the modern dataset to provide context for interpreting long-term change in response to climate drivers. We found that New Hope Creek was heterotrophic in all years, with highly seasonal carbon cycling. Much of the modern variability can be explained by water temperature and flow conditions. Warmer temperatures and longer periods of low flow conditions led to faster carbon cycling and increased heterotrophy, while autumn floods suppressed annual ecosystem respiration by reducing river carbon stocks. Comparing modern estimates to those from 50 yr ago, we find that New Hope Creek is now substantially warmer and has higher metabolic fluxes. Despite the limitations of inferring trends between two distant time points, we use modern data to hindcast metabolism and show how climate change has likely accelerated carbon cycling and shortened carbon residence time in New Hope Creek.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145938106","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jácint Tökölyi, Máté Miklós, Jay Bathia, Sebastian Fraune
Bacterial communities associated with animals show complex spatial and temporal variation. The main driving forces behind this variation are still to be deciphered. Differences in microbiome composition could be caused by stochastic changes, such as random gain and loss of microbiome components, as well as deterministic factors, such as variation in temperature (or other abiotic factors), diet, or the availability of microbes with the potential to colonize the hosts in the surrounding environment. Here we investigated seasonal variation in the microbiome of Hydra polyps and the bacterioplankton surrounding them to test the hypothesis that the contribution of environmental microorganisms to host-associated microbial communities varies seasonally. Sampling was performed for two consecutive years in three distinct temperate water bodies in Eastern Hungary: a shallow lake, a deep lake, and a river. We found that the microbiomes of polyps differed from their surrounding environment and varied seasonally. The similarity of polyp and water microbiomes changed seasonally in a population-specific way: microbial communities associated with polyps became markedly more similar to that of their surrounding environment during the summer in the shallow lake habitat, but not in the other populations. Our results suggest that environmental and host-associated microbiomes change independently during most of the year, but high temperature increases the impact of environmental microbiome on host-associated microbial communities.
{"title":"Elevated temperatures increase microbiome similarity between host and environment in a freshwater cnidarian","authors":"Jácint Tökölyi, Máté Miklós, Jay Bathia, Sebastian Fraune","doi":"10.1002/lno.70302","DOIUrl":"10.1002/lno.70302","url":null,"abstract":"<p>Bacterial communities associated with animals show complex spatial and temporal variation. The main driving forces behind this variation are still to be deciphered. Differences in microbiome composition could be caused by stochastic changes, such as random gain and loss of microbiome components, as well as deterministic factors, such as variation in temperature (or other abiotic factors), diet, or the availability of microbes with the potential to colonize the hosts in the surrounding environment. Here we investigated seasonal variation in the microbiome of <i>Hydra</i> polyps and the bacterioplankton surrounding them to test the hypothesis that the contribution of environmental microorganisms to host-associated microbial communities varies seasonally. Sampling was performed for two consecutive years in three distinct temperate water bodies in Eastern Hungary: a shallow lake, a deep lake, and a river. We found that the microbiomes of polyps differed from their surrounding environment and varied seasonally. The similarity of polyp and water microbiomes changed seasonally in a population-specific way: microbial communities associated with polyps became markedly more similar to that of their surrounding environment during the summer in the shallow lake habitat, but not in the other populations. Our results suggest that environmental and host-associated microbiomes change independently during most of the year, but high temperature increases the impact of environmental microbiome on host-associated microbial communities.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145938085","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Recent experimental and modeling work predicted salt fingers, known in saline water bodies, would form under ice in freshwater lakes with specific conductance (SC) as low as 50 μS cm−1. To test this prediction, Toolik Lake, Alaska (summer SC 60–90 μS cm−1) was instrumented with temperature-conductivity arrays. Calculations of solutes excluded with ice formation and a mass balance of changes in concentration of solutes within the lake indicated 90% to 100% of increase in solutes for several months following ice-on was from cryoconcentration. Two metrics based on the ratio of density gradients of temperature and solutes, Rρ and the Turner angle (Tu), obtained by conductivity, temperature, depth (CTD) and microstructure profiling, and Ɍ, ratio of solute and heat fluxes at the ice-water interface, had values indicative of salt fingers below ice. Rρ and Tu were in the range for salt fingers and the diffusive mode of double diffusion in intrusive-features in lower water column. Step-like changes in temperature and SC provide further evidence for double diffusion. Rates of dissipation of turbulent kinetic energy below ice and in intrusions were between 10−12 and 10−10 m2 s−3. Increases in SC above the sediments following ice-on at sites 4, 10 and 15 m deep in the 24 m deep lake imply that salt fluxes created localized increases in density conducive for intrusive flows. These results are the first for freshwater lakes illustrating formation of salt fingers and complex intrusive flows and indicate the need to revise models of under-ice circulation.
最近的实验和建模工作预测,在含盐水体中已知的盐指,将在比电导(SC)低至50 μ S cm - 1的淡水湖冰下形成。为了验证这一预测,我们在阿拉斯加的Toolik湖(夏季SC 60-90 μ S cm−1)使用温度-电导率阵列进行了测量。对不包括冰形成的溶质和湖中溶质浓度变化的质量平衡的计算表明,在结冰后的几个月里,90%到100%的溶质增加来自低温浓缩。通过电导率、温度、深度(CTD)和微观结构分析得到的温度和溶质密度梯度之比R ρ和特纳角(Tu),以及冰-水界面处溶质和热流的比值Ɍ,这两个指标的值表明冰下存在盐指。R ρ和Tu均在盐指和侵入特征双扩散模式范围内。温度和SC的阶梯式变化为双扩散提供了进一步的证据。冰下和侵入体湍流动能耗散速率在10−12 ~ 10−10 m 2 s−3之间。在24米深的湖泊中,4米、10米和15米深的沉积物上的SC在结冰后增加,这意味着盐通量造成了有利于侵入流动的局部密度增加。这些结果是淡水湖泊首次阐明盐指和复杂侵入流的形成,并表明需要修订冰下环流模型。
{"title":"Double diffusion in an ice-covered freshwater lake","authors":"Sally MacIntyre","doi":"10.1002/lno.70305","DOIUrl":"10.1002/lno.70305","url":null,"abstract":"<p>Recent experimental and modeling work predicted salt fingers, known in saline water bodies, would form under ice in freshwater lakes with specific conductance (SC) as low as 50 <i>μ</i>S cm<sup>−1</sup>. To test this prediction, Toolik Lake, Alaska (summer SC 60–90 <i>μ</i>S cm<sup>−1</sup>) was instrumented with temperature-conductivity arrays. Calculations of solutes excluded with ice formation and a mass balance of changes in concentration of solutes within the lake indicated 90% to 100% of increase in solutes for several months following ice-on was from cryoconcentration. Two metrics based on the ratio of density gradients of temperature and solutes, <i>R</i><sub>ρ</sub> and the Turner angle (Tu), obtained by conductivity, temperature, depth (CTD) and microstructure profiling, and <b><i>Ɍ</i></b>, ratio of solute and heat fluxes at the ice-water interface, had values indicative of salt fingers below ice. <i>R</i><sub>ρ</sub> and Tu were in the range for salt fingers and the diffusive mode of double diffusion in intrusive-features in lower water column. Step-like changes in temperature and SC provide further evidence for double diffusion. Rates of dissipation of turbulent kinetic energy below ice and in intrusions were between 10<sup>−12</sup> and 10<sup>−10</sup> m<sup>2</sup> s<sup>−3</sup>. Increases in SC above the sediments following ice-on at sites 4, 10 and 15 m deep in the 24 m deep lake imply that salt fluxes created localized increases in density conducive for intrusive flows. These results are the first for freshwater lakes illustrating formation of salt fingers and complex intrusive flows and indicate the need to revise models of under-ice circulation.</p>","PeriodicalId":18143,"journal":{"name":"Limnology and Oceanography","volume":"71 1","pages":""},"PeriodicalIF":3.7,"publicationDate":"2026-01-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://aslopubs.onlinelibrary.wiley.com/doi/epdf/10.1002/lno.70305","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145897279","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}