首页 > 最新文献

Mass spectrometry最新文献

英文 中文
Electrospray Ionization Mass Spectrometry of Transferrin: Use of Quadrupole Mass Analyzers for Congenital Disorders of Glycosylation. 转铁蛋白的电喷雾电离质谱分析:四极杆质谱分析仪用于先天性糖基化疾病。
Q3 Physics and Astronomy Pub Date : 2022-01-01 Epub Date: 2022-04-15 DOI: 10.5702/massspectrometry.A0103
Yoshinao Wada, Nobuhiko Okamoto

Electrospray ionization (ESI) mass spectrometry of transferrin can be used to diagnose congenital disorders of glycosylation (CDG) by detecting abnormal N-glycosylation due to reduced site occupancy or processing failure. Time-of-flight mass spectrometers are widely used to separate 25-45 charged ions in the m/z 1,700-3,000 range, and a summed zero-charge mass distribution is generated despite the risk of improper deconvolution. In this study, the low m/z region of the multiply-charged ion mass spectrum enabled a robust analysis of CDG. A triple quadrupole mass spectrometer, the standard instrument for newborn screening for inborn errors of metabolism, permitted the identification of the key ions characteristic of different types of CDG affecting PMM2, ALG14, SLC35A1, SLC35A2, MAN1B1 and PGM1 in the m/z 1,970-2,000 region. Charge deconvolution was used as a complementary tool for validating the findings. It was necessary to set a cutoff level for the evaluation, since small peaks indicating glycosylation failure or reduced sialylation were observed, even in control subjects. This method and workflow facilitates the implementation of MS-based analyses and the screening of CDG in clinical laboratories.

电喷雾电离(ESI)质谱法检测转铁蛋白由于位点占用减少或加工失败导致的n -糖基化异常,可用于诊断先天性糖基化障碍(CDG)。飞行时间质谱仪广泛用于分离m/z 1700 - 3000范围内的25-45个带电离子,尽管存在不当反褶积的风险,但仍会产生一个零电荷质量分布。在这项研究中,多重带电离子质谱的低m/z区域使CDG的分析变得可靠。新生儿先天性代谢错误筛查的标准仪器——三联四极杆质谱仪,鉴定了m/z 1970 - 2000区域内影响PMM2、ALG14、SLC35A1、SLC35A2、MAN1B1和PGM1的不同类型CDG的关键离子特征。电荷反褶积被用作验证结果的补充工具。有必要为评估设定一个截止水平,因为即使在对照受试者中也观察到糖基化失败或唾液化减少的小峰。该方法和工作流程便于临床实验室中基于质谱的分析和CDG筛选的实施。
{"title":"Electrospray Ionization Mass Spectrometry of Transferrin: Use of Quadrupole Mass Analyzers for Congenital Disorders of Glycosylation.","authors":"Yoshinao Wada,&nbsp;Nobuhiko Okamoto","doi":"10.5702/massspectrometry.A0103","DOIUrl":"https://doi.org/10.5702/massspectrometry.A0103","url":null,"abstract":"<p><p>Electrospray ionization (ESI) mass spectrometry of transferrin can be used to diagnose congenital disorders of glycosylation (CDG) by detecting abnormal <i>N</i>-glycosylation due to reduced site occupancy or processing failure. Time-of-flight mass spectrometers are widely used to separate 25-45 charged ions in the <i>m</i>/<i>z</i> 1,700-3,000 range, and a summed zero-charge mass distribution is generated despite the risk of improper deconvolution. In this study, the low <i>m</i>/<i>z</i> region of the multiply-charged ion mass spectrum enabled a robust analysis of CDG. A triple quadrupole mass spectrometer, the standard instrument for newborn screening for inborn errors of metabolism, permitted the identification of the key ions characteristic of different types of CDG affecting <i>PMM2</i>, <i>ALG14</i>, <i>SLC35A1</i>, <i>SLC35A2</i>, <i>MAN1B1</i> and <i>PGM1</i> in the <i>m</i>/<i>z</i> 1,970-2,000 region. Charge deconvolution was used as a complementary tool for validating the findings. It was necessary to set a cutoff level for the evaluation, since small peaks indicating glycosylation failure or reduced sialylation were observed, even in control subjects. This method and workflow facilitates the implementation of MS-based analyses and the screening of CDG in clinical laboratories.</p>","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":" ","pages":"A0103"},"PeriodicalIF":0.0,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9395324/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40346746","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Effect of Phosphorylation on the Collision Cross Sections of Peptide Ions in Ion Mobility Spectrometry 离子迁移谱法中磷酸化对肽离子碰撞截面的影响
Q3 Physics and Astronomy Pub Date : 2020-06-15 DOI: 10.1101/2020.06.15.151639
Kosuke Ogata, Chih-Hsiang Chang, Y. Ishihama
The insertion of ion mobility spectrometry (IMS) between LC and MS can improve peptide identification in both proteomics and phosphoproteomics by providing structural information that is complementary to LC and MS, because IMS separates ions on the basis of differences in their shapes and charge states. However, it is necessary to know how phosphate groups affect the peptide collision cross sections (CCS) in order to accurately predict phosphopeptide CCS values and to maximize the usefulness of IMS. In this work, we systematically characterized the CCS values of 4,433 pairs of mono-phosphopeptide and corresponding unphosphorylated peptide ions using trapped ion mobility spectrometry (TIMS). Nearly one-third of the mono-phosphopeptide ions evaluated here showed smaller CCS values than their unphosphorylated counterparts, even though phosphorylation results in a mass increase of 80 Da. Significant changes of CCS upon phosphorylation occurred mainly in structurally extended peptides with large numbers of basic groups, possibly reflecting intramolecular interactions between phosphate and basic groups.
离子迁移率谱法(IMS)在LC和MS之间的插入,通过提供与LC和MS互补的结构信息,可以提高蛋白质组学和磷蛋白质组学中的肽鉴定,因为IMS是根据离子的形状和电荷状态的差异来分离离子的。然而,为了准确预测肽碰撞截面(CCS)值,最大限度地发挥IMS的作用,有必要了解磷酸基对肽碰撞截面(CCS)的影响。在这项工作中,我们系统地表征了4,433对单肽和相应的未磷酸化肽离子的CCS值,使用捕获离子迁移谱法(TIMS)。这里评估的近三分之一的单磷酸肽离子比未磷酸化的离子显示出更小的CCS值,即使磷酸化导致质量增加80 Da。磷酸化后CCS的显著变化主要发生在具有大量碱性基团的结构延伸肽中,这可能反映了磷酸盐与碱性基团之间的分子内相互作用。
{"title":"Effect of Phosphorylation on the Collision Cross Sections of Peptide Ions in Ion Mobility Spectrometry","authors":"Kosuke Ogata, Chih-Hsiang Chang, Y. Ishihama","doi":"10.1101/2020.06.15.151639","DOIUrl":"https://doi.org/10.1101/2020.06.15.151639","url":null,"abstract":"The insertion of ion mobility spectrometry (IMS) between LC and MS can improve peptide identification in both proteomics and phosphoproteomics by providing structural information that is complementary to LC and MS, because IMS separates ions on the basis of differences in their shapes and charge states. However, it is necessary to know how phosphate groups affect the peptide collision cross sections (CCS) in order to accurately predict phosphopeptide CCS values and to maximize the usefulness of IMS. In this work, we systematically characterized the CCS values of 4,433 pairs of mono-phosphopeptide and corresponding unphosphorylated peptide ions using trapped ion mobility spectrometry (TIMS). Nearly one-third of the mono-phosphopeptide ions evaluated here showed smaller CCS values than their unphosphorylated counterparts, even though phosphorylation results in a mass increase of 80 Da. Significant changes of CCS upon phosphorylation occurred mainly in structurally extended peptides with large numbers of basic groups, possibly reflecting intramolecular interactions between phosphate and basic groups.","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"33 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-06-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79253559","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
A Brief History of Mass Spectrometry 质谱简史
Q3 Physics and Astronomy Pub Date : 2019-07-15 DOI: 10.1002/9781119377368.ch2
M. Smoluch, J. Silberring
{"title":"A Brief History of Mass Spectrometry","authors":"M. Smoluch, J. Silberring","doi":"10.1002/9781119377368.ch2","DOIUrl":"https://doi.org/10.1002/9781119377368.ch2","url":null,"abstract":"","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"21 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"83818299","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Mass Spectrometry Applications 质谱应用
Q3 Physics and Astronomy Pub Date : 2019-07-15 DOI: 10.1007/978-1-4614-5626-1_5
C. Soler, J. Rubert, J. Mañes
{"title":"Mass Spectrometry Applications","authors":"C. Soler, J. Rubert, J. Mañes","doi":"10.1007/978-1-4614-5626-1_5","DOIUrl":"https://doi.org/10.1007/978-1-4614-5626-1_5","url":null,"abstract":"","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"33 1","pages":"83-100"},"PeriodicalIF":0.0,"publicationDate":"2019-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"78086349","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Mass Spectrometry Applications 质谱应用
Q3 Physics and Astronomy Pub Date : 2019-06-24 DOI: 10.1002/9781119377368.ch8
V. Cunsolo, S. Foti, J. Ner‐Kluza, A. Drabik, J. Silberring, V. Muccilli, R. Saletti, Katarzyna Pawlak, E. Harwood, Fang Yu, P. Ciborowski, R. Anczkiewicz, Kathrin Altweg, G. Spoto, A. Pawlaczyk, M. Szynkowska, M. Smoluch, D. Kwiatkowska
{"title":"Mass Spectrometry Applications","authors":"V. Cunsolo, S. Foti, J. Ner‐Kluza, A. Drabik, J. Silberring, V. Muccilli, R. Saletti, Katarzyna Pawlak, E. Harwood, Fang Yu, P. Ciborowski, R. Anczkiewicz, Kathrin Altweg, G. Spoto, A. Pawlaczyk, M. Szynkowska, M. Smoluch, D. Kwiatkowska","doi":"10.1002/9781119377368.ch8","DOIUrl":"https://doi.org/10.1002/9781119377368.ch8","url":null,"abstract":"","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"79 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-06-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84080121","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Basic Definitions 基本的定义
Q3 Physics and Astronomy Pub Date : 2019-06-24 DOI: 10.1002/9781119377368.ch3
M. Smoluch, Kinga Piechura
{"title":"Basic Definitions","authors":"M. Smoluch, Kinga Piechura","doi":"10.1002/9781119377368.ch3","DOIUrl":"https://doi.org/10.1002/9781119377368.ch3","url":null,"abstract":"","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"11 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-06-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"80420244","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Abbreviations 缩写
Q3 Physics and Astronomy Pub Date : 2019-06-24 DOI: 10.1002/9781119377368.ch10
Kinga Piechura, M. Smoluch
{"title":"Abbreviations","authors":"Kinga Piechura, M. Smoluch","doi":"10.1002/9781119377368.ch10","DOIUrl":"https://doi.org/10.1002/9781119377368.ch10","url":null,"abstract":"","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"11 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-06-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"89564910","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Appendix 附录
Q3 Physics and Astronomy Pub Date : 2019-06-24 DOI: 10.1002/9781119377368.ch9
Kinga Piechura, M. Smoluch
{"title":"Appendix","authors":"Kinga Piechura, M. Smoluch","doi":"10.1002/9781119377368.ch9","DOIUrl":"https://doi.org/10.1002/9781119377368.ch9","url":null,"abstract":"","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"213 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-06-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"78403722","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Hyphenated Techniques 用连字符连接技术
Q3 Physics and Astronomy Pub Date : 2019-06-24 DOI: 10.1002/9781119377368.ch5
A. Drabik, F. Bellia, P. Mielczarek, J. Silberring
{"title":"Hyphenated Techniques","authors":"A. Drabik, F. Bellia, P. Mielczarek, J. Silberring","doi":"10.1002/9781119377368.ch5","DOIUrl":"https://doi.org/10.1002/9781119377368.ch5","url":null,"abstract":"","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"93 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-06-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"74627235","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Index 指数
Q3 Physics and Astronomy Pub Date : 2019-06-24 DOI: 10.1002/9781119377368.index
{"title":"Index","authors":"","doi":"10.1002/9781119377368.index","DOIUrl":"https://doi.org/10.1002/9781119377368.index","url":null,"abstract":"","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"35 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-06-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81166849","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Mass spectrometry
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1