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Fragmentation and Ionization Efficiency of Positional and Functional Isomers of Paeoniflorin Derivatives in Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry 基质辅助激光解吸/电离飞行时间质谱分析芍药苷衍生物位置和功能异构体的碎片化和电离效率
Q3 Physics and Astronomy Pub Date : 2022-02-28 DOI: 10.5702/massspectrometry.A0101
T. Yamagaki, Kohtaro Sugahara, K. Fujikawa, Kazuto Washida
Paeoniflorin and albiflorin, which are functional isomers, are the major constituents of an herbal medicine derived from Paeonia lactiflora. Those functional isomers and their galloylated derivatives, which are positional isomers, were studied by matrix-assisted laser desorption/ionization–tandem mass spectrometry (MALDI-MS/MS). The resulting mass spectra are discussed based on the fragmentation patterns of the sodium adducts. The product ion spectra of 4-O-galloylalbiflorin and 4′-O-galloylpaeoniflorin differed, even though they were positional isomers. The fragmentations of the ester parts were influenced by the neighboring hydroxyl groups. The ionization efficiency of the sodium adduct of albiflorin was higher than that for paeoniflorin. These results indicate that the carboxylic ester group has a higher affinity for sodium ions than the acetal group, which can be attributed to the carbonyl oxygen being negatively polarized, allowing it to function as a Lewis base.
芍药苷和芍药苷是芍药中功能异构体的主要成分。采用基质辅助激光解吸/电离-串联质谱(MALDI-MS/MS)对这些功能异构体及其没食子酸衍生物进行了研究。根据钠加合物的破碎模式对质谱进行了讨论。4- o -没食子碱芍药苷和4 ' - o -没食子碱芍药苷虽然是位置异构体,但它们的产物离子光谱存在差异。酯部分的断裂受邻近羟基的影响。芍药苷钠加合物的电离效率高于芍药苷。这些结果表明,羧酸酯基团比缩醛基团对钠离子具有更高的亲和力,这可能是由于羰基氧被负极化,使其具有路易斯碱的功能。
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引用次数: 0
Mass Spectrometry Imaging 质谱成像
Q3 Physics and Astronomy Pub Date : 2022-02-25 DOI: 10.5702/massspectrometry.A0102
S. Shimma
Mass spectrometry imaging (MSI) is a technique for obtaining information on the distribution of various molecules by performing mass spectrometry directly on the sample surface. The applications range from small molecules such as lipids to large molecules such as proteins. It is also possible to detect pharmaceuticals and elemental isotopes in interstellar matter. This review will introduce various applications of MSI with examples.
质谱成像(MSI)是一种通过直接在样品表面进行质谱分析来获取各种分子分布信息的技术。应用范围从小分子如脂类到大分子如蛋白质。在星际物质中探测药物和元素同位素也是可能的。本文将通过实例介绍MSI的各种应用。
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引用次数: 1
Electrospray Ionization Mass Spectrometry of Apolipoprotein CIII to Evaluate O-glycan Site Occupancy and Sialylation in Congenital Disorders of Glycosylation. 利用载脂蛋白 CIII 的电喷雾离子化质谱法评估先天性糖基化紊乱的 O-聚糖位点占用率和 Sialylation。
Q3 Physics and Astronomy Pub Date : 2022-01-01 Epub Date: 2022-08-10 DOI: 10.5702/massspectrometry.A0104
Yoshinao Wada, Nobuhiko Okamoto

Congenital disorders of glycosylation (CDG) are inherited metabolic diseases that affect the synthesis of glycoconjugates. Defects in mucin-type O-glycosylation occur independently or in combination with N-glycosylation disorders, and the profiling of the O-glycans of apolipoprotein CIII (apoCIII) by mass spectrometry (MS) can be used to support a diagnosis. The biomarkers are site occupancy and sialylation levels, which are indicated by the content of non-glycosylated apoCIII0a isoform and by the ratio of monosialylated apoCIII1 to disialylated apoCIII2 isoforms, respectively. In this report, electrospray ionization (ESI) quadrupole MS of apoCIII was used to identify these biomarkers. Among the instrumental parameters, the declustering potential (DP) induced the fragmentation of the O-glycan moiety including the Thr-GalNAc linkage, resulting in an increase in apoCIII0a ions. This incurs the risk of creating a false positive for reduced site occupancy. The apoCIII1/apoCIII2 ratio was substantially unchanged despite some dissociation of sialic acids. Therefore, appropriate DP settings are especially important when transferrin, which requires a higher DP, for N-glycosylation disorders is analyzed simultaneously with apoCIII in a single ESI MS measurement. Finally, a reference range of diagnostic biomarkers and mass spectra of apoCIII obtained from patients with SLC35A1-, TRAPPC11-, and ATP6V0A2-CDG are presented.

先天性糖基化紊乱(CDG)是一种遗传性代谢疾病,会影响糖苷酸的合成。粘蛋白型 O-糖基化缺陷可单独发生,也可与 N-糖基化紊乱同时发生,通过质谱(MS)分析载脂蛋白 CIII(apolipoprotein CIII)的 O-糖可用于辅助诊断。生物标志物是位点占有率和糖基化水平,分别通过非糖基化载脂蛋白 CIII0a 同工型的含量和单糖基化载脂蛋白 CIII1 与双糖基化载脂蛋白 CIII2 同工型的比例来表示。本报告采用电喷雾离子化(ESI)四极杆质谱对apoCIII进行了鉴定。在仪器参数中,解聚电位(DP)诱导了包括 Thr-GalNAc 连接在内的 O-糖分子的碎裂,导致 apoCIII0a 离子增加。这有可能造成位点占有率降低的假阳性结果。尽管有一些硅酸解离,但apoCIII1/apoCIII2 的比率基本未变。因此,在一次 ESI MS 测量中同时分析因 N-糖基化紊乱而需要较高 DP 值的转铁蛋白和 apoCIII 时,适当的 DP 值设置尤为重要。最后,介绍了从 SLC35A1-、TRAPPC11- 和 ATP6V0A2-CDG 患者身上获得的诊断生物标记物的参考范围和 apoCIII 的质谱。
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引用次数: 0
Electrospray Ionization Mass Spectrometry of Transferrin: Use of Quadrupole Mass Analyzers for Congenital Disorders of Glycosylation. 转铁蛋白的电喷雾电离质谱分析:四极杆质谱分析仪用于先天性糖基化疾病。
Q3 Physics and Astronomy Pub Date : 2022-01-01 Epub Date: 2022-04-15 DOI: 10.5702/massspectrometry.A0103
Yoshinao Wada, Nobuhiko Okamoto

Electrospray ionization (ESI) mass spectrometry of transferrin can be used to diagnose congenital disorders of glycosylation (CDG) by detecting abnormal N-glycosylation due to reduced site occupancy or processing failure. Time-of-flight mass spectrometers are widely used to separate 25-45 charged ions in the m/z 1,700-3,000 range, and a summed zero-charge mass distribution is generated despite the risk of improper deconvolution. In this study, the low m/z region of the multiply-charged ion mass spectrum enabled a robust analysis of CDG. A triple quadrupole mass spectrometer, the standard instrument for newborn screening for inborn errors of metabolism, permitted the identification of the key ions characteristic of different types of CDG affecting PMM2, ALG14, SLC35A1, SLC35A2, MAN1B1 and PGM1 in the m/z 1,970-2,000 region. Charge deconvolution was used as a complementary tool for validating the findings. It was necessary to set a cutoff level for the evaluation, since small peaks indicating glycosylation failure or reduced sialylation were observed, even in control subjects. This method and workflow facilitates the implementation of MS-based analyses and the screening of CDG in clinical laboratories.

电喷雾电离(ESI)质谱法检测转铁蛋白由于位点占用减少或加工失败导致的n -糖基化异常,可用于诊断先天性糖基化障碍(CDG)。飞行时间质谱仪广泛用于分离m/z 1700 - 3000范围内的25-45个带电离子,尽管存在不当反褶积的风险,但仍会产生一个零电荷质量分布。在这项研究中,多重带电离子质谱的低m/z区域使CDG的分析变得可靠。新生儿先天性代谢错误筛查的标准仪器——三联四极杆质谱仪,鉴定了m/z 1970 - 2000区域内影响PMM2、ALG14、SLC35A1、SLC35A2、MAN1B1和PGM1的不同类型CDG的关键离子特征。电荷反褶积被用作验证结果的补充工具。有必要为评估设定一个截止水平,因为即使在对照受试者中也观察到糖基化失败或唾液化减少的小峰。该方法和工作流程便于临床实验室中基于质谱的分析和CDG筛选的实施。
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引用次数: 3
Effect of Phosphorylation on the Collision Cross Sections of Peptide Ions in Ion Mobility Spectrometry 离子迁移谱法中磷酸化对肽离子碰撞截面的影响
Q3 Physics and Astronomy Pub Date : 2020-06-15 DOI: 10.1101/2020.06.15.151639
Kosuke Ogata, Chih-Hsiang Chang, Y. Ishihama
The insertion of ion mobility spectrometry (IMS) between LC and MS can improve peptide identification in both proteomics and phosphoproteomics by providing structural information that is complementary to LC and MS, because IMS separates ions on the basis of differences in their shapes and charge states. However, it is necessary to know how phosphate groups affect the peptide collision cross sections (CCS) in order to accurately predict phosphopeptide CCS values and to maximize the usefulness of IMS. In this work, we systematically characterized the CCS values of 4,433 pairs of mono-phosphopeptide and corresponding unphosphorylated peptide ions using trapped ion mobility spectrometry (TIMS). Nearly one-third of the mono-phosphopeptide ions evaluated here showed smaller CCS values than their unphosphorylated counterparts, even though phosphorylation results in a mass increase of 80 Da. Significant changes of CCS upon phosphorylation occurred mainly in structurally extended peptides with large numbers of basic groups, possibly reflecting intramolecular interactions between phosphate and basic groups.
离子迁移率谱法(IMS)在LC和MS之间的插入,通过提供与LC和MS互补的结构信息,可以提高蛋白质组学和磷蛋白质组学中的肽鉴定,因为IMS是根据离子的形状和电荷状态的差异来分离离子的。然而,为了准确预测肽碰撞截面(CCS)值,最大限度地发挥IMS的作用,有必要了解磷酸基对肽碰撞截面(CCS)的影响。在这项工作中,我们系统地表征了4,433对单肽和相应的未磷酸化肽离子的CCS值,使用捕获离子迁移谱法(TIMS)。这里评估的近三分之一的单磷酸肽离子比未磷酸化的离子显示出更小的CCS值,即使磷酸化导致质量增加80 Da。磷酸化后CCS的显著变化主要发生在具有大量碱性基团的结构延伸肽中,这可能反映了磷酸盐与碱性基团之间的分子内相互作用。
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引用次数: 8
A Brief History of Mass Spectrometry 质谱简史
Q3 Physics and Astronomy Pub Date : 2019-07-15 DOI: 10.1002/9781119377368.ch2
M. Smoluch, J. Silberring
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引用次数: 2
Mass Spectrometry Applications 质谱应用
Q3 Physics and Astronomy Pub Date : 2019-07-15 DOI: 10.1007/978-1-4614-5626-1_5
C. Soler, J. Rubert, J. Mañes
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引用次数: 1
Mass Spectrometry Applications 质谱应用
Q3 Physics and Astronomy Pub Date : 2019-06-24 DOI: 10.1002/9781119377368.ch8
V. Cunsolo, S. Foti, J. Ner‐Kluza, A. Drabik, J. Silberring, V. Muccilli, R. Saletti, Katarzyna Pawlak, E. Harwood, Fang Yu, P. Ciborowski, R. Anczkiewicz, Kathrin Altweg, G. Spoto, A. Pawlaczyk, M. Szynkowska, M. Smoluch, D. Kwiatkowska
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引用次数: 0
Basic Definitions 基本的定义
Q3 Physics and Astronomy Pub Date : 2019-06-24 DOI: 10.1002/9781119377368.ch3
M. Smoluch, Kinga Piechura
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引用次数: 0
Abbreviations 缩写
Q3 Physics and Astronomy Pub Date : 2019-06-24 DOI: 10.1002/9781119377368.ch10
Kinga Piechura, M. Smoluch
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引用次数: 0
期刊
Mass spectrometry
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