Pub Date : 2025-01-01Epub Date: 2025-10-28DOI: 10.5702/massspectrometry.A0176
Valentin G Tkachenko, Sergey V Silkin, Alexandr V Sakharov, Vasily A Eliferov, Denis V Kolesnik, Anastasia S Konstantinova, Evgeniy A Filatov, Ekaterina S Shiryaeva, Stanislav I Pekov, Igor A Popov
The ion coalescence phenomenon complicates the evaluation of the effective resolution of Fourier-transform mass spectrometers. We propose an approach for confirming the resolution of an electron ionization Fourier-transform mass spectrometer using pairs of organic substances identified by automatically generated formula differences. The proposed method is compared with the search for organic substances in the National Institute of Standards and Technology (NIST) database. Under the given conditions of the mass spectrometer resolution range up to 45000-50000 at 100 m/z, 166 pairs of suitable compounds were found using the proposed method, while a search in the NIST database yielded only 88 pairs of compounds. This enabled the selection of six pairs of organic compounds that were most suitable for confirming the resolution of the high-resolution mass spectrometer using molecular ion peaks, and four pairs of compounds that allowed the resolution to be confirmed using fragment ion peaks. The resolution of the Fourier-transform mass spectrometer designed for gas analysis was experimentally evaluated by analyzing the spectra of a mixture of organic compounds selected using the proposed method.
{"title":"Algorithm for Selecting Organic Compounds to Verify the Resolution of Electron Ionization Mass Spectrometers.","authors":"Valentin G Tkachenko, Sergey V Silkin, Alexandr V Sakharov, Vasily A Eliferov, Denis V Kolesnik, Anastasia S Konstantinova, Evgeniy A Filatov, Ekaterina S Shiryaeva, Stanislav I Pekov, Igor A Popov","doi":"10.5702/massspectrometry.A0176","DOIUrl":"10.5702/massspectrometry.A0176","url":null,"abstract":"<p><p>The ion coalescence phenomenon complicates the evaluation of the effective resolution of Fourier-transform mass spectrometers. We propose an approach for confirming the resolution of an electron ionization Fourier-transform mass spectrometer using pairs of organic substances identified by automatically generated formula differences. The proposed method is compared with the search for organic substances in the National Institute of Standards and Technology (NIST) database. Under the given conditions of the mass spectrometer resolution range up to 45000-50000 at 100 <i>m/z</i>, 166 pairs of suitable compounds were found using the proposed method, while a search in the NIST database yielded only 88 pairs of compounds. This enabled the selection of six pairs of organic compounds that were most suitable for confirming the resolution of the high-resolution mass spectrometer using molecular ion peaks, and four pairs of compounds that allowed the resolution to be confirmed using fragment ion peaks. The resolution of the Fourier-transform mass spectrometer designed for gas analysis was experimentally evaluated by analyzing the spectra of a mixture of organic compounds selected using the proposed method.</p>","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"14 1","pages":"A0176"},"PeriodicalIF":0.0,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12583954/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145452445","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2025-12-18DOI: 10.5702/massspectrometry.A0183
Tohru Yamagaki
I investigated the tandem mass spectrometry (MS/MS) fragmentation of ginsenoside glycosides using matrix-assisted laser desorption/ionization MS for ginsenosides Rg1, Rh1, Rb1, and Rb3, focusing on their sodium adduct molecules [M+Na]+. The glycosidic linkage at the C-20 position cleaved more readily than those at C-3 and C-6. These glycosides fragmented on their glucosyl acceptor sides, exhibiting C- and Z-type fragmentation, although generally B/Y-type fragment ions are dominant in MS/MS spectra of neutral oligosaccharides. These results suggest that, due to the hydrophobic triterpene skeleton of the aglycone, sodium cations cannot effectively coordinate with the aglycone moiety.
{"title":"Glycoside Fragmentation in Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry of Natural Products of Ginsenosides.","authors":"Tohru Yamagaki","doi":"10.5702/massspectrometry.A0183","DOIUrl":"10.5702/massspectrometry.A0183","url":null,"abstract":"<p><p>I investigated the tandem mass spectrometry (MS/MS) fragmentation of ginsenoside glycosides using matrix-assisted laser desorption/ionization MS for ginsenosides Rg1, Rh1, Rb1, and Rb3, focusing on their sodium adduct molecules [M+Na]<sup>+</sup>. The glycosidic linkage at the C-20 position cleaved more readily than those at C-3 and C-6. These glycosides fragmented on their glucosyl acceptor sides, exhibiting C- and Z-type fragmentation, although generally B/Y-type fragment ions are dominant in MS/MS spectra of neutral oligosaccharides. These results suggest that, due to the hydrophobic triterpene skeleton of the aglycone, sodium cations cannot effectively coordinate with the aglycone moiety.</p>","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"14 1","pages":"A0183"},"PeriodicalIF":0.0,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12719552/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145819915","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Polyethylene terephthalate (PET) is widely used across various industries owing to its versatility and favorable properties, including application in beverage bottles, food containers, textile fibers, engineering resins, films, and sheets. However, polymer materials are susceptible to degradation from factors such as light, oxygen, and heat. Therefore, it is crucial to understand the structural changes that occur during degradation and the extent of these changes. This report investigates the structural alterations in PET films resulting from ultraviolet (UV) irradiation utilizing pyrolysis-gas chromatography time-of-flight mass spectrometry (Py-GC-TOFMS) and matrix-assisted laser desorption/ionization-time-of-flight mass spectrometry (MALDI-TOFMS). Using the reactive Py-GC-TOFMS, we estimated the composition of the pyrolysis products resulting from UV degradation through electron ionization, soft ionization, and exact mass measurements. Additionally, artificial intelligence (AI)-based structure analysis was performed to evaluate these compounds' structures. Notably, most degradation products were not found in the National Institute of Standards and Technology database, underscoring the effectiveness of our approach. Using MALDI-TOFMS analysis, we determine the changes in the end groups before and after UV irradiation. This analysis confirmed the generation of a series of carboxylic acid end groups as a result of degradation, a polymer series not detected by reactive pyrolysis GC-MS. We also explored degradation in the depth direction, demonstrating that degradation progresses gradually to depths of several micrometers. Our findings highlight the importance of employing mass spectrometry techniques for a comprehensive analysis of polymer degradation.
{"title":"Characterization of Ultraviolet-Degraded Polyethylene Terephthalate Film Using a Complementary Approach: Reactive Pyrolysis-Gas Chromatography-Mass Spectrometry and Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry.","authors":"Azusa Kubota, Takaya Satoh, Masaaki Ubukata, Ayumi Kubo, Chikako Nakayama","doi":"10.5702/massspectrometry.A0168","DOIUrl":"10.5702/massspectrometry.A0168","url":null,"abstract":"<p><p>Polyethylene terephthalate (PET) is widely used across various industries owing to its versatility and favorable properties, including application in beverage bottles, food containers, textile fibers, engineering resins, films, and sheets. However, polymer materials are susceptible to degradation from factors such as light, oxygen, and heat. Therefore, it is crucial to understand the structural changes that occur during degradation and the extent of these changes. This report investigates the structural alterations in PET films resulting from ultraviolet (UV) irradiation utilizing pyrolysis-gas chromatography time-of-flight mass spectrometry (Py-GC-TOFMS) and matrix-assisted laser desorption/ionization-time-of-flight mass spectrometry (MALDI-TOFMS). Using the reactive Py-GC-TOFMS, we estimated the composition of the pyrolysis products resulting from UV degradation through electron ionization, soft ionization, and exact mass measurements. Additionally, artificial intelligence (AI)-based structure analysis was performed to evaluate these compounds' structures. Notably, most degradation products were not found in the National Institute of Standards and Technology database, underscoring the effectiveness of our approach. Using MALDI-TOFMS analysis, we determine the changes in the end groups before and after UV irradiation. This analysis confirmed the generation of a series of carboxylic acid end groups as a result of degradation, a polymer series not detected by reactive pyrolysis GC-MS. We also explored degradation in the depth direction, demonstrating that degradation progresses gradually to depths of several micrometers. Our findings highlight the importance of employing mass spectrometry techniques for a comprehensive analysis of polymer degradation.</p>","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"14 1","pages":"A0168"},"PeriodicalIF":0.0,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11744444/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143007999","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2025-12-06DOI: 10.5702/massspectrometry.A0179
Lei Li, Qiangqiang Xie, Lee Chuin Chen, Satoshi Ninomiya
We report a robotic sheath-flow probe electrospray ionization mass spectrometry system with a new probe design and automated positioning capabilities for pinpoint ambient mass spectrometry. The system integrates a 3-axis Cartesian robot with two cameras: a fixed global camera for coarse positioning and a movable local camera for fine alignment, enabling users to designate sampling spots by mouse-clicking on live images displayed on the graphical user interface. A microcontroller is used for voltage control, current monitoring, and the detection of probe-sample contact. Sampling, transfer, ionization, and cleaning are fully automated under computer control, and the sheath liquid is supplied by a programmable syringe pump to maintain a stable flow rate. The system successfully analyzed aqueous standards, beverages, and water-rich soft materials such as jelly and fruit slices, yielding stable ion signals with negligible carry-over between measurements.
{"title":"Click-and-Analyze: Automated Pinpoint Ambient Mass Spectrometry with Sheath-Flow Probe Electrospray Ionization.","authors":"Lei Li, Qiangqiang Xie, Lee Chuin Chen, Satoshi Ninomiya","doi":"10.5702/massspectrometry.A0179","DOIUrl":"10.5702/massspectrometry.A0179","url":null,"abstract":"<p><p>We report a robotic sheath-flow probe electrospray ionization mass spectrometry system with a new probe design and automated positioning capabilities for pinpoint ambient mass spectrometry. The system integrates a 3-axis Cartesian robot with two cameras: a fixed global camera for coarse positioning and a movable local camera for fine alignment, enabling users to designate sampling spots by mouse-clicking on live images displayed on the graphical user interface. A microcontroller is used for voltage control, current monitoring, and the detection of probe-sample contact. Sampling, transfer, ionization, and cleaning are fully automated under computer control, and the sheath liquid is supplied by a programmable syringe pump to maintain a stable flow rate. The system successfully analyzed aqueous standards, beverages, and water-rich soft materials such as jelly and fruit slices, yielding stable ion signals with negligible carry-over between measurements.</p>","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"14 1","pages":"A0179"},"PeriodicalIF":0.0,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12686337/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145723861","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-01Epub Date: 2024-10-25DOI: 10.5702/massspectrometry.A0156
Mitsuo Takayama
The molecular ion M+· was observed when the liquid sample of butyrophenone was supplied using atmospheric pressure corona discharge (APCD). In contrast, the vapor supply resulted in the formation of the protonated molecule [M+H]+. The mass spectrum obtained with the liquid supply showed two distinctive fragment ions at m/z 105 and 120, resulting from α-cleavage and McLafferty rearrangement (McLR), respectively. The APCD spectrum showed peaks of M+· and the characteristic two fragment ions that were the same as the field ionization mass spectra of butyrophenone as reported by Chait et al. and Beckey et al. The formation of the molecular and fragment ions strongly indicated that high-electric field tunnel ionization (HEFTI) occurs by the HEF strength exceeding 108 V/m at the tip of the corona needle in APCD. The charge and spin density distributions of the molecular and fragment ions were analyzed by quantum chemical calculations using time-dependent density functional theory (TDDFT) and natural bond orbital (NBO) analysis.
{"title":"Quantum Chemical Analysis of the Molecular and Fragment Ion Formation of Butyrophenone by High-Electric Field Tunnel Ionization at Atmospheric Pressure.","authors":"Mitsuo Takayama","doi":"10.5702/massspectrometry.A0156","DOIUrl":"10.5702/massspectrometry.A0156","url":null,"abstract":"<p><p>The molecular ion M<sup>+·</sup> was observed when the liquid sample of butyrophenone was supplied using atmospheric pressure corona discharge (APCD). In contrast, the vapor supply resulted in the formation of the protonated molecule [M+H]<sup>+</sup>. The mass spectrum obtained with the liquid supply showed two distinctive fragment ions at <i>m/z</i> 105 and 120, resulting from α-cleavage and McLafferty rearrangement (McLR), respectively. The APCD spectrum showed peaks of M<sup>+·</sup> and the characteristic two fragment ions that were the same as the field ionization mass spectra of butyrophenone as reported by Chait <i>et al</i>. and Beckey <i>et al</i>. The formation of the molecular and fragment ions strongly indicated that high-electric field tunnel ionization (HEFTI) occurs by the HEF strength exceeding 10<sup>8</sup> V/m at the tip of the corona needle in APCD. The charge and spin density distributions of the molecular and fragment ions were analyzed by quantum chemical calculations using time-dependent density functional theory (TDDFT) and natural bond orbital (NBO) analysis.</p>","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"13 1","pages":"A0156"},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11522704/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142546294","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-01Epub Date: 2024-10-12DOI: 10.5702/massspectrometry.A0153
Toshinobu Hondo, Yumi Miyake, Michisato Toyoda
A method for the rapid determination of α-tocopherol (α-T) and its oxidative products in plant tissue has been developed using supercritical fluid extraction (SFE) coupled with supercritical fluid chromatography (SFC) and medium vacuum chemical ionization (MVCI) with tandem mass spectrometry. The method is designed to study changes in levels for α-T and its oxidative products in plant cells during photosynthesis, aiming to observe the light response curves. α-T oxidation is a non-enzymatic self-defense mechanism in plant cells. Unlike enzyme-involved reactions, it cannot be stopped, so the oxidation continues in crude extracts even after extraction. Therefore, a real-time in-situ method is essential for tracking the light response curves. To optimize the selective reaction monitoring method, the reaction mixture of α-T and singlet oxygen (1O2), generated by rose Bengal under light illumination, was used as the source of oxidative products. The relative abundance changes in α-tocopherylquinone and 8a-hydroperoxy tocopherone in Pisum sativum L. (Pea) leaves under excessive light illumination have been preliminarily analyzed as part of the light response curve study. The method archives a throughput of 10-15 minutes for analyzing duplicate leaf samples. This process includes cutting off the leaf, sectioning it, placing the sample in a frozen SFE vessel, and conducting SFE/SFC analysis. Consequently, the average throughput is approximately 5-7 minutes per sample.
{"title":"Rapid Analysis for <i>α</i>-Tocopherol and Its Oxidative Products in the <i>Pisum sativum</i> L. Leaf Using Supercritical Fluid Chromatography-Medium Vacuum Chemical Ionization Tandem Mass Spectrometry.","authors":"Toshinobu Hondo, Yumi Miyake, Michisato Toyoda","doi":"10.5702/massspectrometry.A0153","DOIUrl":"https://doi.org/10.5702/massspectrometry.A0153","url":null,"abstract":"<p><p>A method for the rapid determination of <i>α</i>-tocopherol (<i>α</i>-T) and its oxidative products in plant tissue has been developed using supercritical fluid extraction (SFE) coupled with supercritical fluid chromatography (SFC) and medium vacuum chemical ionization (MVCI) with tandem mass spectrometry. The method is designed to study changes in levels for <i>α</i>-T and its oxidative products in plant cells during photosynthesis, aiming to observe the light response curves. <i>α</i>-T oxidation is a non-enzymatic self-defense mechanism in plant cells. Unlike enzyme-involved reactions, it cannot be stopped, so the oxidation continues in crude extracts even after extraction. Therefore, a real-time <i>in-situ</i> method is essential for tracking the light response curves. To optimize the selective reaction monitoring method, the reaction mixture of <i>α</i>-T and singlet oxygen (<sup>1</sup>O<sub>2</sub>), generated by rose Bengal under light illumination, was used as the source of oxidative products. The relative abundance changes in <i>α</i>-tocopherylquinone and 8a-hydroperoxy tocopherone in <i>Pisum sativum</i> L. (Pea) leaves under excessive light illumination have been preliminarily analyzed as part of the light response curve study. The method archives a throughput of 10-15 minutes for analyzing duplicate leaf samples. This process includes cutting off the leaf, sectioning it, placing the sample in a frozen SFE vessel, and conducting SFE/SFC analysis. Consequently, the average throughput is approximately 5-7 minutes per sample.</p>","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"13 1","pages":"A0153"},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11474449/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142469172","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-01Epub Date: 2024-08-03DOI: 10.5702/massspectrometry.A0150
Miho Tanewata, Akira Oikawa
We developed a rapid, accurate, and quantitative method for analyzing glucosinolates (GSLs) by combining column-free liquid chromatography (LC) with direct-infusion mass spectrometry (MS). Conventional methods for analyzing GSLs take a long time (20-50 min per sample) to perform compound separation on an LC column. We achieved a shortened analysis time of 30 seconds per sample using a direct-infusion method. Samples were continuously injected by a pump and autosampler on an LC system directly into the MS. Orbitrap MS detected 11 types of GSLs in the extracts of turnip hypocotyls. The calibration curve of a GSL standard showed a linear response over a 6-digit concentration range from 1 nM to 1 mM. In addition, no decrease in the detected intensity of GSL ions in 100 continuous analyses of turnip extracts was observed. This method may be applied for rapid analysis of GSLs and other health-functional or bioactive compounds.
{"title":"Rapid Analysis of Glucosinolates Using Direct-Infusion Mass Spectrometry.","authors":"Miho Tanewata, Akira Oikawa","doi":"10.5702/massspectrometry.A0150","DOIUrl":"10.5702/massspectrometry.A0150","url":null,"abstract":"<p><p>We developed a rapid, accurate, and quantitative method for analyzing glucosinolates (GSLs) by combining column-free liquid chromatography (LC) with direct-infusion mass spectrometry (MS). Conventional methods for analyzing GSLs take a long time (20-50 min per sample) to perform compound separation on an LC column. We achieved a shortened analysis time of 30 seconds per sample using a direct-infusion method. Samples were continuously injected by a pump and autosampler on an LC system directly into the MS. Orbitrap MS detected 11 types of GSLs in the extracts of turnip hypocotyls. The calibration curve of a GSL standard showed a linear response over a 6-digit concentration range from 1 nM to 1 mM. In addition, no decrease in the detected intensity of GSL ions in 100 continuous analyses of turnip extracts was observed. This method may be applied for rapid analysis of GSLs and other health-functional or bioactive compounds.</p>","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"13 1","pages":"A0150"},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11302999/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141897767","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-01Epub Date: 2024-12-17DOI: 10.5702/massspectrometry.A0164
Eliza Farestiani, Yoshihiro Tamada, Koji Okuda, Eiichiro Fukusaki, Shuichi Shimma
Many previous studies have reported various phospholipids and elements that affect sake production; however, it seems to be challenging to investigate individual types in each rice variety due to their high diversity, not to mention their distribution patterns. Since its introduction, mass spectrometry imaging (MSI) has gained attention in various fields as a simple compound visualization technique. The current study highlights the progress of powerful MSI in comprehensively analyzing phospholipids and minerals in brown rice for sake production. Multivariate analysis suggested phospholipids relating to each rice group based on regions of interest. Phospholipid classes connected with embryo and endosperm included fatty acylcarnitine, diacylglycerol, phosphatidylcholine, phosphatidylglycerol, and phosphatidylethanolamine. Meanwhile, the studied rice groups showed the same distribution of the investigated 12 minerals. This is the first study that reports a comprehensive imaging analysis of phospholipids and elements in brown rice for several cultivars for sake production.
{"title":"Imaging Lipidomics and Metallomics of Brown Rice Cultivars Used for Sake Production.","authors":"Eliza Farestiani, Yoshihiro Tamada, Koji Okuda, Eiichiro Fukusaki, Shuichi Shimma","doi":"10.5702/massspectrometry.A0164","DOIUrl":"10.5702/massspectrometry.A0164","url":null,"abstract":"<p><p>Many previous studies have reported various phospholipids and elements that affect sake production; however, it seems to be challenging to investigate individual types in each rice variety due to their high diversity, not to mention their distribution patterns. Since its introduction, mass spectrometry imaging (MSI) has gained attention in various fields as a simple compound visualization technique. The current study highlights the progress of powerful MSI in comprehensively analyzing phospholipids and minerals in brown rice for sake production. Multivariate analysis suggested phospholipids relating to each rice group based on regions of interest. Phospholipid classes connected with embryo and endosperm included fatty acylcarnitine, diacylglycerol, phosphatidylcholine, phosphatidylglycerol, and phosphatidylethanolamine. Meanwhile, the studied rice groups showed the same distribution of the investigated 12 minerals. This is the first study that reports a comprehensive imaging analysis of phospholipids and elements in brown rice for several cultivars for sake production.</p>","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"13 1","pages":"A0164"},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11664313/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142882449","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
In our previous work, pulsed nano-electrospray ionization was applied to aqueous mixtures of 5 × 10-6 M angiotensin II (A), bradykinin (B), and gramicidin S (G). It was found that G was totally suppressed by the presence of A and B. In this work, mixtures of A, B, and G in water/acetonitrile (W/AcN) were investigated by pulsed nano-electrospray ionization. It was found that G and A were detected as major ions, but B was almost totally suppressed by the addition of 1% acetic acid in the W/AcN solution. In contrast, B was detected as one of the major ions for the solution with the addition of 10 mM ammonium acetate. These results were interpreted based on the solvent effect. While the hydration of ornithine -NH3+ in aqueous solution makes the ion most hydrophilic, solvation of ornithine -NH3+ by AcN in W/AcN makes the ion solvophobic and surface active.
在我们之前的工作中,脉冲纳米电喷雾离子化被应用于 5 × 10-6 M 血管紧张素 II (A)、缓激肽 (B) 和桔皮素 S (G) 的水混合物。在这项工作中,利用脉冲纳米电喷雾离子化技术研究了水/乙腈(W/AcN)中的 A、B 和 G 混合物。结果发现,G 和 A 是作为主要离子被检测到的,但在 W/AcN 溶液中加入 1% 的醋酸后,B 几乎被完全抑制。相反,在加入 10 mM 乙酸铵的溶液中,B 作为主要离子之一被检测到。这些结果是根据溶剂效应解释的。鸟氨酸 -NH3 + 在水溶液中的水合作用使该离子具有最强的亲水性,而鸟氨酸 -NH3 + 在 W/AcN 溶液中被 AcN 溶解则使该离子具有疏溶性和表面活性。
{"title":"Pulsed Nano-Electrospray Ionization Applied to Solutions of Angiotensin II, Bradykinin, and Gramicidin S in Water/Acetonitrile (1/1) with the Addition of 1% Acetic Acid and 10 mM Ammonium Acetate.","authors":"Kenzo Hiraoka, Dilshadbek T Usmanov, Satoshi Ninomiya, Stephanie Rankin-Turner, Satoko Akashi","doi":"10.5702/massspectrometry.A0157","DOIUrl":"10.5702/massspectrometry.A0157","url":null,"abstract":"<p><p>In our previous work, pulsed nano-electrospray ionization was applied to aqueous mixtures of 5 × 10<sup>-6</sup> M angiotensin II (A), bradykinin (B), and gramicidin S (G). It was found that G was totally suppressed by the presence of A and B. In this work, mixtures of A, B, and G in water/acetonitrile (W/AcN) were investigated by pulsed nano-electrospray ionization. It was found that G and A were detected as major ions, but B was almost totally suppressed by the addition of 1% acetic acid in the W/AcN solution. In contrast, B was detected as one of the major ions for the solution with the addition of 10 mM ammonium acetate. These results were interpreted based on the solvent effect. While the hydration of ornithine -NH<sub>3</sub> <sup>+</sup> in aqueous solution makes the ion most hydrophilic, solvation of ornithine -NH<sub>3</sub> <sup>+</sup> by AcN in W/AcN makes the ion solvophobic and surface active.</p>","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"13 1","pages":"A0157"},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11565128/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142648621","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-01Epub Date: 2024-02-27DOI: 10.5702/massspectrometry.A0142
Bharath S Kumar
Among the most typical posttranslational modifications is glycosylation, which often involves the covalent binding of an oligosaccharide (glycan) to either an asparagine (N-linked) or a serine/threonine (O-linked) residue. Studies imply that the N-glycan portion of a glycoprotein could serve as a particular disease biomarker rather than the protein itself because N-linked glycans have been widely recognized to evolve with the advancement of tumors and other diseases. N-glycans found on protein asparagine sites have been especially significant. Since N-glycans play clearly defined functions in the folding of proteins, cellular transport, and transmission of signals, modifications to them have been linked to several illnesses. However, because these N-glycans' production is not template driven, they have a substantial morphological range, rendering it difficult to distinguish the species that are most relevant to biology and medicine using standard techniques. Mass spectrometry (MS) techniques have emerged as effective analytical tools for investigating the role of glycosylation in health and illness. This is due to developments in MS equipment, data collection, and sample handling techniques. By recording the spatial dimension of a glycan's distribution in situ, mass spectrometry imaging (MSI) builds atop existing methods while offering added knowledge concerning the structure and functionality of biomolecules. In this review article, we address the current development of glycan MSI, starting with the most used tissue imaging techniques and ionization sources before proceeding on to a discussion on applications and concluding with implications for clinical research.
{"title":"Recent Developments and Application of Mass Spectrometry Imaging in N-Glycosylation Studies: An Overview.","authors":"Bharath S Kumar","doi":"10.5702/massspectrometry.A0142","DOIUrl":"10.5702/massspectrometry.A0142","url":null,"abstract":"<p><p>Among the most typical posttranslational modifications is glycosylation, which often involves the covalent binding of an oligosaccharide (glycan) to either an asparagine (N-linked) or a serine/threonine (O-linked) residue. Studies imply that the N-glycan portion of a glycoprotein could serve as a particular disease biomarker rather than the protein itself because N-linked glycans have been widely recognized to evolve with the advancement of tumors and other diseases. N-glycans found on protein asparagine sites have been especially significant. Since N-glycans play clearly defined functions in the folding of proteins, cellular transport, and transmission of signals, modifications to them have been linked to several illnesses. However, because these N-glycans' production is not template driven, they have a substantial morphological range, rendering it difficult to distinguish the species that are most relevant to biology and medicine using standard techniques. Mass spectrometry (MS) techniques have emerged as effective analytical tools for investigating the role of glycosylation in health and illness. This is due to developments in MS equipment, data collection, and sample handling techniques. By recording the spatial dimension of a glycan's distribution <i>in situ</i>, mass spectrometry imaging (MSI) builds atop existing methods while offering added knowledge concerning the structure and functionality of biomolecules. In this review article, we address the current development of glycan MSI, starting with the most used tissue imaging techniques and ionization sources before proceeding on to a discussion on applications and concluding with implications for clinical research.</p>","PeriodicalId":18243,"journal":{"name":"Mass spectrometry","volume":"13 1","pages":"A0142"},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10904931/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140022127","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}