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Correction: Value of miR-31 and mir-150-3p as diagnostic and prognostic biomarkers for breast cancer. 更正:miR-31 和 mir-150-3p 作为乳腺癌诊断和预后生物标志物的价值。
IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-22 DOI: 10.1007/s11033-024-10010-z
Elif Erturk, Ferda Ari, Omer Enes Onur, Sehsuvar Mustafa Gokgoz, Sahsine Tolunay
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引用次数: 0
Potential ameliorative effect of Dapagliflozin on systemic inflammation-induced cardiovascular injury via endoplasmic reticulum stress and autophagy pathway. 达帕格列净通过内质网应激和自噬途径对全身炎症诱导的心血管损伤具有潜在的改善作用
IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-21 DOI: 10.1007/s11033-024-09990-9
Muhammet Yusuf Tepebasi, Esma Selcuk, Rumeysa Taner, Serife Tasan, Halil Asci, Ali Baran Gunes, Berkehan Sarisahin, Bunyamin Aydın

Background: Dapagliflozin (DPG) is a sodium-glucose cotransporter-2 inhibitor and is used in the treatment of diabetes. In this study, we aimed to investigate the effect of DPG on cardiotoxicity caused by systemic inflammation via endoplasmic reticulum (ER) stress and autophagy.

Methods and results: Four groups of thirty-two Wistar Albino rats were created: Control (1 ml oral physiological saline for five days and intraperitoneal saline on the 5th day), LPS (1 ml oral physiological saline for five days and intraperitoneal 5 mg/kg of LPS on the 5th day), LPS + DPG (10 mg/kg of DPG orally for five days and 5 mg/kg of LPS intraperitoneally on the 5th day), and DPG (10 mg/kg of DPG orally for five days and 5 mg/kg of SF intraperitoneally on the 5th day). Histopathological and immunohistochemical analyses were performed on heart and aorta tissues. ER stress and autophagy gene markers in heart tissues were evaluated by RT-qPCR. Oxidative stress in heart tissues and serum cardiac enzymes were analyzed by spectrophotometric method. The heart and aortic tissues of the LPS group showed increased expressions of Tumor Necrosis Factor-α (TNF-α) and Caspase-3 (Cas-3), along with mild hyperemia, slight inflammatory cell infiltrations, and myocardial cell damage. The heart tissues also showed genetically increased expressions of include binding immunoglobulin protein (BiP/ GRP78), protein kinase RNA-like ER Kinase (PERK), inositol-requiring enzyme 1 (IRE-1), activating transcription factors 4 (ATF-4), activating transcription factors 4 (ATF6), C/EBP homologous protein (CHOP), and BECLIN 1. Furthermore, Creatine kinase-MB (CK-MB) and Lactate dehydrogenase (LDH) levels in blood tissue significantly increased, according to biochemical analysis. With DPG therapy, all of these findings were reversed.

Conclusion: In conclusion, DPG protects against the cardiotoxic effect of systemic inflammation with its antioxidant and anti-inflammatory properties by regulating ER stress and autophagy pathways.

背景:达帕格列净(DPG)是一种钠-葡萄糖共转运体-2抑制剂,用于治疗糖尿病。本研究旨在探讨 DPG 通过内质网(ER)应激和自噬对全身炎症引起的心脏毒性的影响:方法和结果:32 只 Wistar 白化大鼠分为四组:对照组(口服生理盐水 1 毫升,连续 5 天,第 5 天腹腔注射生理盐水)、LPS 组(口服生理盐水 1 毫升,连续 5 天,第 5 天腹腔注射 5 毫克/千克 LPS)、LPS + DPG 组(口服 DPG 10 毫克/千克,连续 5 天,第 5 天腹腔注射 5 毫克/千克 LPS)和 DPG 组(口服 DPG 10 毫克/千克,连续 5 天,第 5 天腹腔注射 5 毫克/千克 SF)。对心脏和主动脉组织进行组织病理学和免疫组化分析。心脏组织中的ER应激和自噬基因标记物通过RT-qPCR进行评估。用分光光度法分析了心脏组织中的氧化应激和血清中的心肌酶。LPS组的心脏和主动脉组织显示肿瘤坏死因子-α(TNF-α)和Caspase-3(Cas-3)表达增加,并伴有轻度充血、轻微炎症细胞浸润和心肌细胞损伤。心脏组织还显示出包括结合免疫球蛋白(BiP/ GRP78)、蛋白激酶 RNA 样 ER 激酶(PERK)、肌醇需要酶 1(IRE-1)、激活转录因子 4(ATF-4)、激活转录因子 4(ATF6)、C/EBP 同源蛋白(CHOP)和 BECLIN 1 的基因表达增加。此外,根据生化分析,血液组织中的肌酸激酶-MB(CK-MB)和乳酸脱氢酶(LDH)水平也明显升高。使用 DPG 治疗后,所有这些结果都得到了逆转:总之,DPG具有抗氧化和抗炎特性,可通过调节ER应激和自噬途径来防止全身性炎症对心脏的毒性作用。
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引用次数: 0
Potential hypothesis for the increased risk of Parkinson´s disease following COVID-19. COVID-19 增加帕金森病风险的潜在假设。
IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-21 DOI: 10.1007/s11033-024-10021-w
Raffaella Mormile, Cristina Mormile, Carmine Picone

Patients with severe COVID-19 may be more likely to develop PD as a result of shared biological pathways including a great expansion of MDSCs and an imbalance in Th17/Tregs ratio. We think that these shared pathogenic features may mechanistically explain the COVID-19 - PD axis. Thus, we assume that patients who recovered from critical COVID-19 should be selected based upon a potential higher risk of developing PD. Further studies are needed to better define the possible relationship between COVID-19 and neuroinflammation and identify whether some people are more likely to develop PD after contracting COVID-19 than others with special emphasis to ascertain possible vulnerable genetic backgrounds or epigenetic factors acting on brain which may promote PD during SARS COV-2 infection. Finally, we think that regular physical activity should be performed and encouraged in patients with PD.

重度 COVID-19 患者更有可能发展为帕金森病,这是由于共同的生物学途径,包括 MDSCs 的大量扩增和 Th17/Tregs 比例失调。我们认为,这些共同的致病特征可能从机理上解释了 COVID-19 - PD 轴。因此,我们认为应该根据潜在的更高发病风险来选择从危重 COVID-19 中康复的患者。我们需要进一步研究,以更好地确定 COVID-19 和神经炎症之间的可能关系,并确定是否有些人在感染 COVID-19 后比其他人更容易患上帕金森氏症,特别是要确定可能的脆弱遗传背景或作用于大脑的表观遗传因素,这些因素可能会在 SARS COV-2 感染期间促进帕金森氏症的发生。最後,我們認為應鼓勵頸椎疾病患者定期進行體能活動。
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引用次数: 0
Diversity of transactivation regions of DMRT1 in vertebrates. 脊椎动物 DMRT1 的转录激活区的多样性。
IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-21 DOI: 10.1007/s11033-024-10006-9
Naoki Ishikawa, Kazuko Fujitani, Norihito Okano, Shun Hayashi, Nene Sakabe, Shiori Inazumi, Honoka Okuyama, Kota Seki, Kosuke Suda, Daisuke Tsukamoto, Takuya Matsuo, Kei Tamura, Michihiko Ito

Background: Doublesex and mab-3 related transcription factor (DMRT) 1, commonly found in all vertebrates, regulates the transcription of genes involved in the masculinization and maintenance of gonadal somatic cells and/or germline cell development. DMRT1 has a DNA-binding domain called the DM domain and a transcription regulatory region. Unlike the former, there is little knowledge about the latter transcription regulatory region. This study aimed to identify the transcription activation regions of DMRT1 from four species: humans and mice (mammals), leopard geckos (reptiles), and medaka (teleost fish), adding perspectives on evolutionary conservation and diversity.

Methods and results: For each species, several expression plasmids of deletion mutants were constructed, and the resultant plasmid and a DMRT1-driven luciferase reporter were co-transfected into cultured cells to measure transactivation ability. The key point of this analysis is that the transactivation ability was normalized by quantifying the expression levels of DMRT1 variants using the HiBiT tag. As a result, two to three transactivation regions were suggested to exist in the C-terminal region of the DM domain in all four species. Among seven regions in DMRT1, the fourth region from the N-terminus contributed to transactivation common to the four species, and the sixth and seventh regions on the C-terminal side differed depending on the species.

Conclusions: These findings indicated that the regions involved in the transactivation ability of DMRT1 could subtly change during evolution, indicating diversity in transactivation domains.

背景:双性和mab-3相关转录因子(DMRT)1普遍存在于所有脊椎动物中,它调节涉及性腺体细胞和/或生殖细胞发育的男性化和维持的基因转录。DMRT1 有一个称为 DM 结构域的 DNA 结合结构域和一个转录调控区。与前者不同,人们对后者的转录调控区知之甚少。本研究旨在从人类和小鼠(哺乳动物)、豹壁虎(爬行动物)和青鳉(驯养鱼类)这四个物种中鉴定 DMRT1 的转录激活区,为进化保护和多样性提供新的视角:针对每个物种,构建了多个缺失突变体的表达质粒,并将构建的质粒和 DMRT1 驱动的荧光素酶报告物共同转染到培养细胞中,以测量转录激活能力。这项分析的关键在于,通过量化使用 HiBiT 标签的 DMRT1 变体的表达水平,对转录激活能力进行了归一化处理。结果表明,在所有四个物种中,DM结构域的C端区域都存在两到三个转激活区域。在DMRT1的七个区域中,从N端开始的第四个区域对四个物种的转录起着共同的作用,而C端的第六个和第七个区域则因物种而异:这些研究结果表明,DMRT1的转激活能力所涉及的区域在进化过程中会发生微妙的变化,表明转激活结构域的多样性。
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引用次数: 0
Lomitapide: navigating cardiovascular challenges with innovative therapies. 洛米他匹:以创新疗法应对心血管挑战。
IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-21 DOI: 10.1007/s11033-024-10003-y
Undral Munkhsaikhan, Karima Ait-Aissa, Amal M Sahyoun, Ehsanul Hoque Apu, Ammaar H Abidi, Adam Kassan, Modar Kassan

Dyslipidemia is the most significant risk factor for cardiovascular diseases (CVDs) Secondary dyslipidemia: its treatments and association with atherosclerosis. Glob Health Med, Efficacy and safety of saroglitazar for the management of dyslipidemia: A systematic review and meta-analysis of interventional studies. The current treatment strategies for managing dyslipidemia focus on reducing low-density lipoprotein cholesterol (LDL-C) to minimize the risks of atherosclerosis and myocardial infarction (MI). Homozygous Familial Hypercholesterolemia (HoFH) is an inherited autosomal dominant disease caused by a mutation in the LDL receptor (LDLr), which can lead to extremely high levels of LDL-C The Beneficial Effect of Lomitapide on the Cardiovascular System in LDLr(-/-) Mice with Obesity, The microsomal triglyceride transfer protein inhibitor lomitapide improves vascular function in mice with obesity. Although statin therapy has been the primary treatment for dyslipidemia, HoFH patients do not respond well to statins, requiring alternative therapies. Microsomal triglyceride transfer protein (MTP) inhibition has emerged as a potential therapeutic target for treating HoFH. MTP is primarily responsible for transferring triglyceride and other lipids into apolipoprotein B (ApoB) during the assembly of very low-density lipoprotein (VLDL) particles in the liver. Lomitapide, an inhibitor of MTP, has been approved for treatingof HoFH adults. Unlike statins, lomitapide does not act on the LDLr to reduce cholesterol. Instead, lomitapide lowers the levels of ApoB-containing proteins, primarily VLDL, eventually decreasing LDL-C levels. Studies have shown that lomitapide can reduce LDL-C levels by more than 50% in patients with HoFH who have failed to respond adequately to other treatments. Lowering LDL-C levels is important for preventing atherosclerosis, reducing cardiovascular risk, improving endothelial function, and promoting overall cardiovascular health, especially for patients with HoFH Efficacy and safety of a microsomal triglyceride transfer protein inhibitor in patients with homozygous familial hypercholesterolaemia: a single-arm, open-label, phase 3 study. This review paper focuses on research findings regarding the therapeutic benefits of lomitapide, highlighting its effectiveness in lowering cholesterol levels and reducing the risk of CVDs The microsomal triglyceride transfer protein inhibitor lomitapide improves vascular function in mice with obesity.

血脂异常是心血管疾病(CVDs)最重要的风险因素 继发性血脂异常:其治疗方法及其与动脉粥样硬化的关系。全球健康医学》(Glob Health Med),《沙格列扎治疗血脂异常的疗效和安全性》(Saroglitazar for the management of dyslipidemia):对干预性研究的系统回顾和荟萃分析。目前控制血脂异常的治疗策略主要是降低低密度脂蛋白胆固醇(LDL-C),以尽量减少动脉粥样硬化和心肌梗死(MI)的风险。洛米他匹对 LDLr(-/-)肥胖小鼠心血管系统的有益影响,微粒体甘油三酯转移蛋白抑制剂洛米他匹可改善肥胖小鼠的血管功能。虽然他汀类药物治疗一直是血脂异常的主要治疗方法,但HoFH患者对他汀类药物反应不佳,需要替代疗法。抑制微粒体甘油三酯转移蛋白(MTP)已成为治疗HoFH的潜在治疗靶点。微粒体甘油三酯转移蛋白主要负责在肝脏组装极低密度脂蛋白(VLDL)颗粒的过程中将甘油三酯和其他脂类转移到载脂蛋白 B(ApoB)中。洛米他匹是一种 MTP 抑制剂,已被批准用于治疗 HoFH 成人。与他汀类药物不同,洛米他匹不作用于 LDLr 以降低胆固醇。相反,洛米他匹降低含载脂蛋白 B 蛋白(主要是 VLDL)的水平,最终降低 LDL-C 水平。研究表明,对于其他治疗方法无效的 HoFH 患者,洛米他匹可将低密度脂蛋白胆固醇水平降低 50%以上。降低低密度脂蛋白胆固醇水平对于预防动脉粥样硬化、降低心血管风险、改善内皮功能和促进整体心血管健康非常重要,尤其是对于HoFH患者。微粒体甘油三酯转移蛋白抑制剂洛米他匹能改善肥胖症小鼠的血管功能。
{"title":"Lomitapide: navigating cardiovascular challenges with innovative therapies.","authors":"Undral Munkhsaikhan, Karima Ait-Aissa, Amal M Sahyoun, Ehsanul Hoque Apu, Ammaar H Abidi, Adam Kassan, Modar Kassan","doi":"10.1007/s11033-024-10003-y","DOIUrl":"10.1007/s11033-024-10003-y","url":null,"abstract":"<p><p>Dyslipidemia is the most significant risk factor for cardiovascular diseases (CVDs) Secondary dyslipidemia: its treatments and association with atherosclerosis. Glob Health Med, Efficacy and safety of saroglitazar for the management of dyslipidemia: A systematic review and meta-analysis of interventional studies. The current treatment strategies for managing dyslipidemia focus on reducing low-density lipoprotein cholesterol (LDL-C) to minimize the risks of atherosclerosis and myocardial infarction (MI). Homozygous Familial Hypercholesterolemia (HoFH) is an inherited autosomal dominant disease caused by a mutation in the LDL receptor (LDLr), which can lead to extremely high levels of LDL-C The Beneficial Effect of Lomitapide on the Cardiovascular System in LDLr(-/-) Mice with Obesity, The microsomal triglyceride transfer protein inhibitor lomitapide improves vascular function in mice with obesity. Although statin therapy has been the primary treatment for dyslipidemia, HoFH patients do not respond well to statins, requiring alternative therapies. Microsomal triglyceride transfer protein (MTP) inhibition has emerged as a potential therapeutic target for treating HoFH. MTP is primarily responsible for transferring triglyceride and other lipids into apolipoprotein B (ApoB) during the assembly of very low-density lipoprotein (VLDL) particles in the liver. Lomitapide, an inhibitor of MTP, has been approved for treatingof HoFH adults. Unlike statins, lomitapide does not act on the LDLr to reduce cholesterol. Instead, lomitapide lowers the levels of ApoB-containing proteins, primarily VLDL, eventually decreasing LDL-C levels. Studies have shown that lomitapide can reduce LDL-C levels by more than 50% in patients with HoFH who have failed to respond adequately to other treatments. Lowering LDL-C levels is important for preventing atherosclerosis, reducing cardiovascular risk, improving endothelial function, and promoting overall cardiovascular health, especially for patients with HoFH Efficacy and safety of a microsomal triglyceride transfer protein inhibitor in patients with homozygous familial hypercholesterolaemia: a single-arm, open-label, phase 3 study. This review paper focuses on research findings regarding the therapeutic benefits of lomitapide, highlighting its effectiveness in lowering cholesterol levels and reducing the risk of CVDs The microsomal triglyceride transfer protein inhibitor lomitapide improves vascular function in mice with obesity.</p>","PeriodicalId":18755,"journal":{"name":"Molecular Biology Reports","volume":"51 1","pages":"1082"},"PeriodicalIF":2.6,"publicationDate":"2024-10-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142470194","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Morphological data and DNA barcoding reveal the presence of the alien freshwater leech Helobdella octatestisaca (Hirudinida: Glossiphoniformes) in North Africa (Tunisia). 形态学数据和 DNA 条形码揭示了北非(突尼斯)存在外来淡水水蛭 Helobdella octatestisaca(Hirudinida: Glossiphoniformes)。
IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-21 DOI: 10.1007/s11033-024-10004-x
Raja Ben Ahmed, Łukasz Gajda, Piotr Świątek

Background: We hereby report the first occurrence of Helobdella octatestisaca in North Africa, specifically in Tunisia, as a likely introduced species from the Neotropical Region. Historically, leeches bearing a prominent chitinous scute on their dorsal surface were commonly diagnosed as H. stagnalis. Most probably, H. octatestisaca had previously been misidentified as H. stagnalis in Tunisia.

Methods and results: The identification was primarily based on morphological evidence, supplemented by genetic data obtained from COI DNA barcoding. The morphology of the examined specimens was consistent with the original species description, notably characterized by the presence of four pairs of testisacs. To support our findings, we conducted a phylogenetic analysis using the Maximum Likelihood method based on COI alignment constructed with the newly obtained sequence from Tunisian specimens and complete or nearly complete 'Folmer fragment' sequences of congeners sourced from the GenBank database.

Conclusions: This study highlights the first identification of H. octatestisaca in North Africa and suggests that previous records of H. stagnalis in Tunisia likely misidentified this species.

背景:我们在此报告首次在北非(特别是突尼斯)发现八角蛭(Helobdella octatestisaca),它很可能是从新热带地区引入的物种。在历史上,背上有明显壳质鳞片的水蛭通常被诊断为 H. stagnalis。在突尼斯,很可能曾将 H. octatestisaca 误认为 H. stagnalis:鉴定主要基于形态学证据,并辅以 COI DNA 条形码获得的遗传数据。受检标本的形态与原始物种描述一致,主要特征是有四对睾丸。为了支持我们的研究结果,我们使用最大似然法进行了系统发育分析,该方法基于从突尼斯标本中新获得的 COI 序列和从 GenBank 数据库中获得的同系物完整或接近完整的 "Folmer 片段 "序列:本研究首次在北非鉴定出 H. octatestisaca,并表明突尼斯以前的 H. stagnalis 记录可能误认了该物种。
{"title":"Morphological data and DNA barcoding reveal the presence of the alien freshwater leech Helobdella octatestisaca (Hirudinida: Glossiphoniformes) in North Africa (Tunisia).","authors":"Raja Ben Ahmed, Łukasz Gajda, Piotr Świątek","doi":"10.1007/s11033-024-10004-x","DOIUrl":"https://doi.org/10.1007/s11033-024-10004-x","url":null,"abstract":"<p><strong>Background: </strong>We hereby report the first occurrence of Helobdella octatestisaca in North Africa, specifically in Tunisia, as a likely introduced species from the Neotropical Region. Historically, leeches bearing a prominent chitinous scute on their dorsal surface were commonly diagnosed as H. stagnalis. Most probably, H. octatestisaca had previously been misidentified as H. stagnalis in Tunisia.</p><p><strong>Methods and results: </strong>The identification was primarily based on morphological evidence, supplemented by genetic data obtained from COI DNA barcoding. The morphology of the examined specimens was consistent with the original species description, notably characterized by the presence of four pairs of testisacs. To support our findings, we conducted a phylogenetic analysis using the Maximum Likelihood method based on COI alignment constructed with the newly obtained sequence from Tunisian specimens and complete or nearly complete 'Folmer fragment' sequences of congeners sourced from the GenBank database.</p><p><strong>Conclusions: </strong>This study highlights the first identification of H. octatestisaca in North Africa and suggests that previous records of H. stagnalis in Tunisia likely misidentified this species.</p>","PeriodicalId":18755,"journal":{"name":"Molecular Biology Reports","volume":"51 1","pages":"1081"},"PeriodicalIF":2.6,"publicationDate":"2024-10-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142470197","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparing the distribution of common human papillomavirus genotypes among the population of Fars province in southwest Iran with the genotypes included in the available HPV vaccines. 比较伊朗西南部法尔斯省人口中常见人类乳头瘤病毒基因型的分布情况与现有人类乳头瘤病毒疫苗中包含的基因型。
IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-21 DOI: 10.1007/s11033-024-10017-6
Mahtab Kalani, Fatemeh Mirzaei, Haniyeh Keyghobadi, Gholamhossein Keighobadi, Atefeh Raoofat, Mehdi Kalani, Ali Moravej

Background: Given the strong association between high-risk HPV genotypes, such as HPV 16 and 18, and cervical cancer, this study aimed to compare the distribution of common HPV genotypes in the southwest Iranian population with those included in the available vaccines.

Methods: Based on the sample quality, DNA was extracted from the biological samples of 8036 individuals included in the study using three different methods (automated instrument, column, and precipitation), and a total of 21 different HPV genotypes were detected using real-time PCR.

Results: The majority of participants were women (> 99%), with a positive rate of HPV infection of 29.9%, in which high-risk genotypes were dominant in 84.9% cases. The highest rate of HPV infections was observed in the age ≤ 30 years (35.9%). HPV 6 and 16 were the most frequent low- and high-risk genotypes, respectively. Multi HPV infections were observed in 35% of positive samples and the highest cross infections were observed between HPV6 and 16. Co-infection with HPV 16 and 18 was observed in 21 positive samples (1%). Although vaccination is essential to reduce the outcome of HPV infections, such as cervical cancer, other frequently occurring high-risk genotypes are not included in the 9-valent vaccine.

Conclusion: Since the association between cervical cancer and other high-risk HPV types rather than 16 and 18 has been less studied, investigating their pathogenicity in cervical cancer is recommended. Furthermore, the new generation of HPV vaccines should contain other frequently occurring high-risk genotypes beyond those currently covered in approved vaccines.

背景:鉴于高危 HPV 基因型(如 HPV 16 和 18)与宫颈癌之间的密切联系,本研究旨在比较伊朗西南部人群中常见 HPV 基因型的分布情况与现有疫苗中的基因型:根据样本质量,使用三种不同的方法(自动仪器、柱法和沉淀法)从 8036 名研究对象的生物样本中提取 DNA,并使用实时 PCR 检测出共 21 种不同的 HPV 基因型:大多数参与者为女性(> 99%),HPV 感染阳性率为 29.9%,其中 84.9% 的病例以高风险基因型为主。HPV感染率最高的年龄段为 30 岁以下(35.9%)。HPV 6 和 16 分别是最常见的低危和高危基因型。在 35% 的阳性样本中观察到多种 HPV 感染,HPV6 和 16 之间的交叉感染最高。在 21 个阳性样本(1%)中观察到了 HPV 16 和 18 的合并感染。虽然接种疫苗对减少宫颈癌等 HPV 感染的后果至关重要,但 9 价疫苗中并不包括其他经常出现的高危基因型:结论:由于宫颈癌与其他高危 HPV 类型(而非 16 和 18 型)之间的关系研究较少,因此建议调查这些类型在宫颈癌中的致病性。此外,新一代 HPV 疫苗应包含目前已获批准的疫苗所涵盖的高危基因型之外的其他经常出现的高危基因型。
{"title":"Comparing the distribution of common human papillomavirus genotypes among the population of Fars province in southwest Iran with the genotypes included in the available HPV vaccines.","authors":"Mahtab Kalani, Fatemeh Mirzaei, Haniyeh Keyghobadi, Gholamhossein Keighobadi, Atefeh Raoofat, Mehdi Kalani, Ali Moravej","doi":"10.1007/s11033-024-10017-6","DOIUrl":"https://doi.org/10.1007/s11033-024-10017-6","url":null,"abstract":"<p><strong>Background: </strong>Given the strong association between high-risk HPV genotypes, such as HPV 16 and 18, and cervical cancer, this study aimed to compare the distribution of common HPV genotypes in the southwest Iranian population with those included in the available vaccines.</p><p><strong>Methods: </strong>Based on the sample quality, DNA was extracted from the biological samples of 8036 individuals included in the study using three different methods (automated instrument, column, and precipitation), and a total of 21 different HPV genotypes were detected using real-time PCR.</p><p><strong>Results: </strong>The majority of participants were women (> 99%), with a positive rate of HPV infection of 29.9%, in which high-risk genotypes were dominant in 84.9% cases. The highest rate of HPV infections was observed in the age ≤ 30 years (35.9%). HPV 6 and 16 were the most frequent low- and high-risk genotypes, respectively. Multi HPV infections were observed in 35% of positive samples and the highest cross infections were observed between HPV6 and 16. Co-infection with HPV 16 and 18 was observed in 21 positive samples (1%). Although vaccination is essential to reduce the outcome of HPV infections, such as cervical cancer, other frequently occurring high-risk genotypes are not included in the 9-valent vaccine.</p><p><strong>Conclusion: </strong>Since the association between cervical cancer and other high-risk HPV types rather than 16 and 18 has been less studied, investigating their pathogenicity in cervical cancer is recommended. Furthermore, the new generation of HPV vaccines should contain other frequently occurring high-risk genotypes beyond those currently covered in approved vaccines.</p>","PeriodicalId":18755,"journal":{"name":"Molecular Biology Reports","volume":"51 1","pages":"1083"},"PeriodicalIF":2.6,"publicationDate":"2024-10-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142470161","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Differential regulation of glucosinolate-myrosinase mediated defense determines host-aphid interaction in Indian mustard Brassica juncea L. 葡萄糖苷酸-酪氨酸酶介导的防御差异调节决定了印度芥菜中宿主与蚜虫的相互作用
IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-21 DOI: 10.1007/s11033-024-10002-z
Ashakiran Loitongbam, Naresh Kumar Samal, Nikhil Ram Kumar, Satish Kumar, Muthuganeshan Annamalai, Aditi Kundu, Sabtharishi Subramanian, Ramcharan Bhattacharya

Background: India's oilseed economy falls short of self-sufficiency and is supplemented by huge imports every year. Increasing national productivity of the major oilseeds is confronted with yield losses due to diverse biotic and abiotic stresses. The productivity of Indian mustard (Brassica juncea Linnaeus), belonging to the family Brassicaceae, is significantly reduced due to damage caused by mustard aphids (Lipaphis erysimi Kaltenbach, Hemiptera: Aphididae). Rapid colonization by the nymphs makes it difficult to protect the crop through agrochemicals. Aphids release effector molecules to modulate the host-defence responses. Glucosinolates (GSLs) extensively found in Brassicaceae family, are hydrolysed by myrosinase into toxic compounds that deter herbivore insects.

Methods: Here, we investigated the differential activation of the glucosinolate-myrosinase pathway in mustard manifesting susceptibility and resistance to different aphid species. Mustard plants were challenged by two different aphid species mustard aphid and cowpea aphid (Aphis craccivora Koch, Hemiptera: Aphididae) leading to complete host-susceptibility in one case and resistance in the other, respectively. Differential regulation of the GSL biosynthetic pathway and myrosinase activity was assessed by gene expression study and ultra-performance liquid chromatography quadrupole time-of-flight tandem mass spectrometry (UPLC- QToF-ESL-MS).

Results: Gene expression study identified selective transcriptional attenuation of the key GSL biosynthetic and myrosinase gene in mustard when challenged with mustard aphid. In contrary, the activation of GSL biosynthetic genes in conjunction with myrosinase at the transcriptional level was profound in mustard, when challenged with cowpea aphid. UPLC-MS analysis showed higher turnover in the hydrolysis of glucosinolates by myrosinase which led to concomitant generation of glucose as byproduct in response to cowpea aphid in mustard plants.

Conclusion: GSL-myrosinase pathway is specifically attenuated by the successful aphid species in mustard and thus plays a pivotal role in determining the outcome of the B. juncea-aphid interaction. The results open up a new genetic modification strategy for developing resistance against aphids.

背景:印度的油籽经济无法实现自给自足,每年都要靠大量进口来补充。在提高全国主要油籽产量的同时,也面临着各种生物和非生物胁迫造成的产量损失。由于芥菜蚜(Lipaphis erysimi Kaltenbach,半翅目:蚜科)的危害,属于十字花科的印度芥菜(Brassica juncea Linnaeus)的产量显著下降。由于若虫的快速定殖,很难通过农用化学品来保护作物。蚜虫释放效应分子来调节宿主防御反应。方法:在此,我们研究了芥菜中葡萄糖苷酸-酪氨酸酶途径的不同激活情况,这些途径表现出对不同蚜虫种类的易感性和抗性。芥菜植株分别受到两种不同蚜虫芥子蚜和豇豆蚜(Aphis craccivora Koch, Hemiptera: Aphididae)的挑战,导致一种情况下宿主完全易感,另一种情况下宿主产生抗性。通过基因表达研究和超高效液相色谱四极杆飞行时间串联质谱(UPLC- QToF-ESL-MS)对 GSL 生物合成途径和酪氨酸酶活性的差异调控进行了评估:结果:基因表达研究发现,芥菜受到芥菜蚜虫挑战时,其关键的 GSL 生物合成基因和酪氨酸酶基因会出现选择性转录衰减。相反,当芥菜受到豇豆蚜虫的侵害时,GSL 生物合成基因和酪氨酸酶在转录水平上被激活。UPLC-MS分析表明,酪氨酸酶水解葡萄糖苷酸盐的周转率较高,导致芥菜植物在应对豇豆蚜虫时同时产生葡萄糖作为副产品:结论:GSL-酪氨酸酶途径会被芥菜中成功的蚜虫种类特异性地减弱,因此在决定豇豆蚜虫-蚜虫相互作用的结果中起着关键作用。这些结果为开发抗蚜性开辟了一种新的基因修饰策略。
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引用次数: 0
Exploring gene mutations and multidrug resistance in Mycobacterium tuberculosis: a study from the Lung Hospital in Vietnam. 探索结核分枝杆菌的基因突变和多药耐药性:越南肺科医院的一项研究。
IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-21 DOI: 10.1007/s11033-024-10015-8
Thuy Thi Bich Vo, Diem Thi Nguyen, Tuan Chi Nguyen, Hoan Thi Nguyen, Hop Thi Tran, Minh Ngoc Nghiem

Background: Drug-resistant tuberculosis not only diminishes treatment efficacy but also heightens the risk of transmission and mortality. Investigating Mycobacterium tuberculosis resistance to first-line antituberculosis drugs is essential to tackle a major global health challenge.

Methods and results: Using Sanger sequencing, this study investigates gene mutations associated with multidrug resistance in drug-resistant M. tuberculosis strains. Among 30 samples, mutations were found in genes linked to first-line anti-tuberculosis drug resistance. Rifampicin resistance was observed in 46.67% of the samples, with the most frequent mutation in the rpoB gene at codon 450 (S450L) occurring in 23.33% of cases. Similarly, isoniazid resistance was found in 86.67% of samples, with 33.33% of cases indicating the katG gene mutation at codon 315 (S315T). Additionally, streptomycin resistance was present in 76.67% of samples, and 30% of these cases were mainly linked to the rpsL gene mutation at codon 43 (K43R).

Conclusion: These findings illuminate the genetic mechanisms behind drug resistance in M. tuberculosis. By identifying specific genetic markers, this research enhances our ability to diagnose and treat drug-resistant Tuberculosis more accurately and efficiently.

背景:耐药性结核病不仅会降低治疗效果,还会增加传播和死亡风险。调查结核分枝杆菌对一线抗结核药物的耐药性对于应对这一重大的全球健康挑战至关重要:本研究利用桑格测序法调查了耐药结核分枝杆菌菌株中与耐多药相关的基因突变。在 30 个样本中,发现了与一线抗结核药物耐药性相关的基因突变。46.67% 的样本对利福平产生了耐药性,其中 23.33% 的病例中最常见的突变发生在 rpoB 基因第 450 个密码子处(S450L)。同样,在 86.67% 的样本中发现了异烟肼耐药性,其中 33.33% 的病例表明 katG 基因在 315 密码子处发生了突变(S315T)。此外,76.67%的样本对链霉素产生抗药性,其中30%的病例主要与第43密码子(K43R)处的rpsL基因突变有关:这些发现揭示了结核杆菌耐药性背后的遗传机制。通过确定特定的遗传标记,这项研究提高了我们更准确、更有效地诊断和治疗耐药结核病的能力。
{"title":"Exploring gene mutations and multidrug resistance in Mycobacterium tuberculosis: a study from the Lung Hospital in Vietnam.","authors":"Thuy Thi Bich Vo, Diem Thi Nguyen, Tuan Chi Nguyen, Hoan Thi Nguyen, Hop Thi Tran, Minh Ngoc Nghiem","doi":"10.1007/s11033-024-10015-8","DOIUrl":"https://doi.org/10.1007/s11033-024-10015-8","url":null,"abstract":"<p><strong>Background: </strong>Drug-resistant tuberculosis not only diminishes treatment efficacy but also heightens the risk of transmission and mortality. Investigating Mycobacterium tuberculosis resistance to first-line antituberculosis drugs is essential to tackle a major global health challenge.</p><p><strong>Methods and results: </strong>Using Sanger sequencing, this study investigates gene mutations associated with multidrug resistance in drug-resistant M. tuberculosis strains. Among 30 samples, mutations were found in genes linked to first-line anti-tuberculosis drug resistance. Rifampicin resistance was observed in 46.67% of the samples, with the most frequent mutation in the rpoB gene at codon 450 (S450L) occurring in 23.33% of cases. Similarly, isoniazid resistance was found in 86.67% of samples, with 33.33% of cases indicating the katG gene mutation at codon 315 (S315T). Additionally, streptomycin resistance was present in 76.67% of samples, and 30% of these cases were mainly linked to the rpsL gene mutation at codon 43 (K43R).</p><p><strong>Conclusion: </strong>These findings illuminate the genetic mechanisms behind drug resistance in M. tuberculosis. By identifying specific genetic markers, this research enhances our ability to diagnose and treat drug-resistant Tuberculosis more accurately and efficiently.</p>","PeriodicalId":18755,"journal":{"name":"Molecular Biology Reports","volume":"51 1","pages":"1084"},"PeriodicalIF":2.6,"publicationDate":"2024-10-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142470180","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Adaptive responses of skeletal muscle to calcaneal tendon partial injury in rats: insights into remodeling and plasticity. 骨骼肌对大鼠小腿肌腱部分损伤的适应性反应:对重塑和可塑性的见解。
IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-21 DOI: 10.1007/s11033-024-09992-7
Victoria Assis, Rosângela Vieira de Andrade, Ivo Vieira de Sousa Neto, Fabrício Reichert Barin, Gracielle Vieira Ramos, Octávio Luiz Franco, Otavio Nobrega, Raquel Agnelli Mesquita-Ferrari, Tainá Caroline Dos Santos Malavazzi, Thiago Dos Santos Rosa, Hugo de Luca Corrêa, Bernando Petriz, João Luiz Quaglioti Durigan, Rita de Cassia Marqueti

Background: Skeletal muscle is a highly adaptive tissue, capable of responding to different physiological and functional demands, even in situations that may cause instability.

Objectives: To evaluate how partial calcaneal tendon (CT) injuries affect the remodeling and plasticity of the gastrocnemius muscle over time.

Methods and results: The study was carried out with Wistar rats randomly divided into five groups. The control group comprised animals not subjected to partial CT damage. The remaining four groups were subjected to partial CT damage and were further categorized based on the time of euthanasia: 3, 14, 28, and 55 days after injury. The gastrocnemius muscle was collected and used for gene expression analysis, zymography, flow cytometry, and morphology. The calcaneal tendon was analyzed only to verify the presence of the partial injury.

Results: The impact of partial CT injury on the gastrocnemius homeostasis, particularly on gene expression, was more pronounced in the 3-day group compared to the other groups, especially the control group. Cytokine profile and morphologic alterations occurred in the 55 days group when compared to the other groups.

Conclusions: The data reported here suggest that partial injury can negatively affect intracellular signaling and degradation pathways, disturbing the muscular extracellular matrix regulatory mechanisms and communication with the tendon. However, skeletal muscle seems to mitigate these harmful effects in comparison with lesions that affect muscle and tendon.

背景:骨骼肌是一种适应性很强的组织,能够对不同的生理和功能需求做出反应,即使在可能导致不稳定的情况下也是如此:评估部分小腿肌腱(CT)损伤如何随着时间的推移影响腓肠肌的重塑和可塑性:研究对象为 Wistar 大鼠,随机分为五组。对照组包括未受到 CT 部分损伤的动物。其余四组受到 CT 部分损伤,并根据安乐死时间进一步分类:损伤后 3、14、28 和 55 天。收集腓肠肌并用于基因表达分析、酶谱分析、流式细胞术和形态学分析。分析小腿肌腱只是为了验证是否存在部分损伤:结果:与其他组(尤其是对照组)相比,3 天组的 CT 部分损伤对腓肠肌稳态的影响更明显,尤其是对基因表达的影响。与其他组相比,细胞因子谱和形态改变发生在 55 天组:本文报告的数据表明,部分损伤会对细胞内信号传导和降解途径产生负面影响,扰乱肌肉细胞外基质调节机制以及与肌腱的交流。然而,与影响肌肉和肌腱的损伤相比,骨骼肌似乎可以减轻这些有害影响。
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Molecular Biology Reports
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