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Digital multiplex ligation-dependent probe amplification identifies exon-level copy number variants in patients with suspected hereditary cancer and negative next-generation sequencing results. 数字多重连接依赖探针扩增确定了疑似遗传性癌症患者的外显子水平拷贝数变异和阴性的下一代测序结果。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-16 DOI: 10.1007/s11033-026-11541-3
Ceren Damla Durmaz, Nesibe Saliha Bulut, Dilsu Dicle Erkan, Neyran Kertmen, Ömer Çağrı Akçin, Ömer Dizdar, Zafer Arık, Naz Güleray Lafcı, Sercan Aksoy
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引用次数: 0
Correspondence to Methodological considerations for FSHR variant interpretation in PCOS. 对应于PCOS中FSHR变体解释的方法学考虑。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-16 DOI: 10.1007/s11033-025-11358-6
Mahtab Behrafigh, Mouness Rahimian, Maryam Afkari, Mona Khosravi-Far, Navid Almadani, Seyed Abolhassan Shahzadeh Fazeli
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引用次数: 0
Correction: Differential expression of sulfate transporters under selenium supply identifies OsSULTR1;1 as a candidate for nutritional enhancement in super basmati rice. 更正:硒供应下硫酸盐转运蛋白的差异表达鉴定OsSULTR1;1作为超级印度香米营养增强的候选物质。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-16 DOI: 10.1007/s11033-026-11545-z
Noreen Aslam, Muhammad Sameeullah, Songul Gurel, Ekrem Gurel
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引用次数: 0
Molecular mechanisms in endometriosis: linking JAK/STAT pathway, ferroptosis, and microbial dysbiosis. 子宫内膜异位症的分子机制:连接JAK/STAT通路、铁下垂和微生物生态失调。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-14 DOI: 10.1007/s11033-025-11401-6
Humaira Shah, Naguib Salleh, Mukhri Hamdan, Nelli Giribabu

Endometriosis is a chronic gynaecological disorder characterized by ectopic endometrial growth, inflammation, pain, and infertility. Current therapies, largely hormonal and surgical, have limited efficacy and compromise fertility, underscoring the need for alternative approaches that directly address the inflammatory drivers. Recent evidence suggests that gut microbiota dysbiosis and iron overload contribute to the pathophysiology of endometriosis, with excess iron potentially inducing ferroptosis, a regulated form of lipid peroxidation-driven cell death that amplifies inflammation. Concurrently, cytokine-mediated JAK/STAT signalling, particularly IL-6/STAT3, integrates signals from immune cells, ferroptotic processes, and microbial metabolites, positioning it as a central regulatory axis in endometriosis. This review synthesizes mechanistic data linking alterations in the gut microbiota, microbial metabolites, ferroptosis, and JAK/STAT signalling in the inflammatory microenvironment of endometriosis. While direct causal evidence remains limited, converging findings from preclinical and translational studies suggest that the microbiota-ferroptosis-JAK/STAT interaction network forms an interconnected system that contributes to sustained inflammation. Our discussion brings these mechanisms into a shared framework, suggesting that their combined influence may give clearer insight into endometriosis. We propose that exploring these molecular pathways may open new avenues for microbiota- and ferroptosis-informed strategies that target inflammation while preserving fertility.

子宫内膜异位症是一种慢性妇科疾病,其特征是子宫内膜异位生长、炎症、疼痛和不孕。目前的治疗方法,主要是激素和手术,疗效有限,而且会影响生育能力,因此需要直接解决炎症驱动因素的替代方法。最近的证据表明,肠道菌群失调和铁超载有助于子宫内膜异位症的病理生理,过量的铁可能诱导铁下沉,这是一种受调节的脂质过氧化驱动的细胞死亡形式,可放大炎症。同时,细胞因子介导的JAK/STAT信号,特别是IL-6/STAT3,整合了来自免疫细胞、铁沉降过程和微生物代谢物的信号,将其定位为子宫内膜异位症的中心调节轴。这篇综述综合了子宫内膜异位症炎症微环境中肠道微生物群、微生物代谢物、铁凋亡和JAK/STAT信号的改变的机制数据。虽然直接的因果证据仍然有限,但临床前和转化研究的结果表明,微生物-铁- jak /STAT相互作用网络形成了一个相互关联的系统,有助于持续的炎症。我们的讨论将这些机制纳入一个共同的框架,表明它们的综合影响可以更清楚地了解子宫内膜异位症。我们提出,探索这些分子途径可能为微生物群和死铁信息策略开辟新的途径,这些策略可以在保持生育能力的同时靶向炎症。
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引用次数: 0
Clinical outcomes in recurrent glioblastoma with oncolytic virotherapy: a review. 溶瘤病毒治疗复发性胶质母细胞瘤的临床疗效综述。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-14 DOI: 10.1007/s11033-026-11564-w
Feng Tang, Zhen-Yuan Liu, Jin-Zhou Yang, Ya-Di Xu, Zhi-Qiang Li

Glioblastoma (GBM) is a highly aggressive and lethal form of brain cancer with limited treatment options, particularly for recurrent cases. Oncolytic virus (OV) therapy is a novel therapeutic strategy for recurrent GBM, leveraging its ability to selectively target and destroy malignant cells while sparing surrounding healthy tissue. Recent clinical trials have indicated that oncolytic virotherapy has an acceptable safety profile and the potential to enhance survival in recurrent GBM. For instance, CAN-3110, a Nestin-promoter-driven herpes simplex virus-1 (HSV-1), demonstrated a median overall survival of 14.9 months in patients with recurrent GBM, with HSV-1 seropositive patients achieving more prolonged survival (14.2 versus 7.8 months in seronegative patients). This review aims to synthesize the current evidence on clinical outcomes in patients with recurrent GBM receiving oncolytic virotherapy, with a specific focus on safety profiles, therapeutic efficacy, and survival outcomes.

胶质母细胞瘤(GBM)是一种高度侵袭性和致死性的脑癌,治疗方案有限,特别是复发病例。溶瘤病毒(OV)治疗是复发性GBM的一种新的治疗策略,利用其选择性靶向和破坏恶性细胞的能力,同时保留周围的健康组织。最近的临床试验表明,溶瘤病毒治疗具有可接受的安全性,并有可能提高复发性GBM的生存率。例如,CAN-3110,一种巢蛋白启动子驱动的单纯疱疹病毒-1 (HSV-1),在复发性GBM患者中显示出14.9个月的中位总生存期,HSV-1血清阳性患者获得更长的生存期(14.2个月,而血清阴性患者为7.8个月)。本综述旨在综合目前关于复发性GBM患者接受溶瘤病毒治疗的临床结果的证据,特别关注安全性、治疗效果和生存结果。
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引用次数: 0
STAT4 mediated modulation of T-B cell interactions profiling: enhances antitumor immunity in non-small cell lung cancer (NSCLC). STAT4介导的T-B细胞相互作用谱的调节:增强非小细胞肺癌(NSCLC)的抗肿瘤免疫
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-14 DOI: 10.1007/s11033-026-11558-8
Roshni Bibi, Melvin George, Koustav Sarkar
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引用次数: 0
Xmu-mp-1 attenuates streptozotocin-induced neurotoxicity in SH-SY5Y cells: potential role of Hippo pathway modulation. Xmu-mp-1减弱链脲佐菌素诱导的SH-SY5Y细胞神经毒性:Hippo通路调节的潜在作用
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-13 DOI: 10.1007/s11033-026-11561-z
Manas Ranjan Sahu, Mir Hilal Ahmad, Amal Chandra Mondal

Background: Alzheimer’s disease (AD) is the most common neurodegenerative dementia, with its primary symptoms appearing only after substantial neuronal death. Streptozotocin (STZ) is a neurotoxic compound that induces neurodegenerative effects similar to those seen in AD. AD is a complex and multifactorial disorder, and the exact etiology of neuronal loss remains elusive. In recent years, hyperactivation of mammalian ste-20-like kinase − 1/2 (MST1/2)-mediated Hippo signaling is critical for neuronal death in AD pathophysiology. Our previous research on a rat model of sporadic AD revealed that inhibiting Hippo signaling via the MST1/2 small-molecule antagonist Xmu-mp-1 is a promising therapeutic strategy for AD. Based on these findings, the present study aimed to investigate the therapeutic potential of Xmu-mp-1 in mitigating STZ-induced neurotoxicity using differentiated SH-SY5Y cells.

Methods and results: In this study, differentiated SH-SY5Y cells were pretreated with 1 µM Xmu-mp-1 for 2 h, prior to 2 mM STZ exposure for 24 h. We assessed the effects on cytotoxicity, oxidative stress, mitochondrial dysfunction, and apoptosis, followed by an investigation into the underlying mechanistic basis. Our findings revealed that Xmu-mp-1 pretreatment considerably attenuated toxicity and improved cell survival in STZ-exposed SH-SY5Y cells by attenuating STZ-induced intracellular oxidative stress, mitochondrial depolarization, neuronal apoptosis, and neurodegeneration. Xmu-mp-1 apparently involved modulation of Hippo signaling to mediate these neuroprotective effects.

Conclusions: Taken together, these findings suggest that MST1-mediated neuronal apoptosis may contribute to neuronal death in STZ-induced neurotoxicity, and inhibiting MST/Hippo signaling via Xmu-mp-1 could represent an effective approach to alleviate AD-associated neurotoxic events.

背景:阿尔茨海默病(AD)是最常见的神经退行性痴呆,其主要症状仅在大量神经元死亡后出现。链脲佐菌素(STZ)是一种神经毒性化合物,可诱导与阿尔茨海默病相似的神经退行性作用。阿尔茨海默病是一种复杂的多因素疾病,神经元丧失的确切病因尚不清楚。近年来,哺乳动物ste-20样激酶- 1/2 (MST1/2)介导的Hippo信号的过度激活对阿尔茨海默病病理生理中的神经元死亡至关重要。我们之前对散发性阿尔茨海默病大鼠模型的研究表明,通过MST1/2小分子拮抗剂Xmu-mp-1抑制Hippo信号是一种很有前景的阿尔茨海默病治疗策略。基于这些发现,本研究旨在探讨Xmu-mp-1在缓解stz诱导的SH-SY5Y分化细胞神经毒性方面的治疗潜力。方法和结果:在本研究中,分化的SH-SY5Y细胞先用1µM Xmu-mp-1预处理2小时,然后再用2mm STZ预处理24小时。我们评估了对细胞毒性、氧化应激、线粒体功能障碍和凋亡的影响,随后研究了潜在的机制基础。我们的研究结果表明,Xmu-mp-1预处理通过减弱stz诱导的细胞内氧化应激、线粒体去极化、神经元凋亡和神经退行性变,显著降低stz暴露的SH-SY5Y细胞的毒性并提高细胞存活率。Xmu-mp-1显然参与了Hippo信号的调节,从而介导了这些神经保护作用。结论:综上所述,这些发现表明mst1介导的神经元凋亡可能导致stz诱导的神经毒性神经元死亡,通过Xmu-mp-1抑制MST/Hippo信号传导可能是缓解ad相关神经毒性事件的有效途径。
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引用次数: 0
Lipid droplets and major metabolic disorders. 脂滴与主要代谢紊乱。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-13 DOI: 10.1007/s11033-026-11563-x
William J Dechert, Guanglong He

Lipid droplets (LDs) are ubiquitous subcellular organelles playing crucial roles in lipid and energy homeostasis. They are constantly generated in the intramembrane space of the endoplasmic reticulum (ER) through unique mechanisms. Upon maturation, they bud off from the ER outer membrane into the cytosol, travel through the cytosolic microtubular network, and make contacts to most of the other subcellular organelles to perform their cellular functions. On the one hand, these organelles can grow or fuse with other smaller ones and serve as storage for extra cellular lipid products. On the other hand, when metabolic needs arise such as in nutrient deprivation or during exercises, the esterified lipids inside the LDs undergo stepwise lipolysis, e.g. basal and stimulated lipolysis, under the regulation of a set of proteins and kinases that are specifically targeted to the monolayer phospholipid membrane of the LDs. The dynamic homeostasis of their biogenesis and lipolysis is also intimately related to other cellular signaling pathways in a paracrine or endocrine manner which actively participate in the regulation of cellular homeostasis and systemic health. This review will summarize the current understanding of the underlying mechanisms mediating the biogenesis and metabolic impact of LDs in normal and disease status with a focus on their roles in propelling and sustaining chronic inflammation.

脂滴是普遍存在的亚细胞细胞器,在脂质和能量稳态中起着至关重要的作用。它们通过独特的机制在内质网(ER)的膜内空间不断产生。成熟后,它们从内质网外膜萌发进入细胞质,穿过细胞质微管网络,并与大多数其他亚细胞细胞器接触,以执行其细胞功能。一方面,这些细胞器可以生长或与其他较小的细胞器融合,并作为额外的细胞脂质产物的储存。另一方面,当代谢需要出现时,例如在营养剥夺或运动期间,在一组特异性针对ldl单层磷脂膜的蛋白质和激酶的调节下,ldl内的酯化脂质会逐步进行脂肪分解,例如基础脂肪分解和刺激脂肪分解。它们的生物生成和脂肪分解的动态稳态也与旁分泌或内分泌方式的其他细胞信号通路密切相关,积极参与细胞稳态和全身健康的调节。本文将总结目前对正常和疾病状态下LDs的生物发生和代谢影响的潜在机制的理解,重点是它们在促进和维持慢性炎症中的作用。
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引用次数: 0
Investigation of transcription factor NFκB-mediated autophagy regulation mechanisms in non-small cell lung cancer. 转录因子nfκ b介导的非小细胞肺癌自噬调节机制研究。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-13 DOI: 10.1007/s11033-026-11552-0
Ozge Alvur, Hakan Akca

Background: Autophagy is a conserved intracellular degradation and recycling process in eukaryotic cells. Autophagy dysfunction is linked to several diseases, including cancer. Depending on cancer type and context, autophagy may act as a tumor suppressor or promote tumor progression. Various cellular pathways regulate autophagy, among which the NFκB signaling pathway plays a dual role, either promoting or inhibiting autophagy. Since many cancer therapies affect both autophagy and NFκB, understanding their interaction can help develop more effective combination treatments. However, the specific mechanisms by which NFκB regulates autophagy in Non-Small Cell Lung Cancer (NSCLC) remain unclear. In this study, we aimed to elucidate this regulatory relationship and identify key genes involved.

Methods and results: We established NSCLC cell groups with NFκB overexpression or suppression, and with or without autophagy induction. Autophagy levels were assessed via western blot. RNA-seq analysis was performed to identify differentially expressed genes among these groups, and candidate regulators were selected based on expression patterns and in silico analysis. Selected genes were validated with qRT-PCR. Our results show that NFκB positively regulates autophagy-related processes in NSCLC cells, as reflected by altered LC3B-II levels. Genes with expression which decreased upon NFκB suppression but increased with NFκB overexpression under autophagy-induced conditions were identified as candidate regulators. Among these, the putative NFκB-NLRP3 regulatory relationship appears to play a particularly important role in the upregulation of autophagy.

Conclusions: This study provides an NSCLC-specific transcriptional framework linking NFκB activity to autophagy- and inflammation-associated gene networks. By integrating expression profiling and in silico analyses, we identify candidate NFκB-responsive genes, including NLRP3, that may contribute to autophagy-related cellular responses in NSCLC.

背景:自噬是真核细胞中一个保守的细胞内降解和再循环过程。自噬功能障碍与包括癌症在内的几种疾病有关。根据不同的癌症类型和环境,自噬可能起到肿瘤抑制或促进肿瘤进展的作用。调节自噬的细胞通路多种多样,其中NFκB信号通路起着促进或抑制自噬的双重作用。由于许多癌症治疗同时影响自噬和NFκB,了解它们的相互作用有助于开发更有效的联合治疗。然而,NFκB在非小细胞肺癌(NSCLC)中调控自噬的具体机制尚不清楚。在本研究中,我们旨在阐明这一调控关系并确定其中的关键基因。方法与结果:建立NFκB过表达或抑制、诱导或不诱导自噬的非小细胞肺癌细胞组。western blot检测细胞自噬水平。通过RNA-seq分析确定各组之间的差异表达基因,并根据表达模式和计算机分析选择候选调节因子。选择的基因用qRT-PCR进行验证。我们的研究结果表明,NFκB正调控非小细胞肺癌细胞的自噬相关过程,这反映在LC3B-II水平的改变上。在自噬诱导条件下,NFκB抑制时表达减少,而NFκB过表达时表达增加的基因被确定为候选调节因子。其中,假定的nf - κ b - nlrp3调控关系似乎在自噬上调中起着特别重要的作用。结论:本研究提供了nsclc特异性转录框架,将NFκB活性与自噬和炎症相关基因网络联系起来。通过整合表达谱和计算机分析,我们确定了候选的nfκ b应答基因,包括NLRP3,这些基因可能有助于非小细胞肺癌中自噬相关的细胞应答。
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引用次数: 0
Assay for numerical and graphical detection of Native American mitochondrial haplogroup B with real-time PCR. 印第安人线粒体B单倍群实时荧光定量PCR的数值和图形检测。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-13 DOI: 10.1007/s11033-026-11544-0
Richell Maribet Ramírez-Molina, Humberto García-Ortiz, Angélica González-Oliver
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引用次数: 0
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