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Decoding the anti-hypertensive mechanism of α-mangostin based on network pharmacology, molecular docking and experimental validation. 基于网络药理学、分子对接和实验验证的α-曼戈斯汀抗高血压机理解码
IF 6 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-26 DOI: 10.1186/s10020-024-01001-8
Qi-Qi Xue, Chu-Hao Liu, Yan Li

Background: Hypertension is a leading risk factor for disability and deaths worldwide. Evidence indicates that alpha-mangostin(α-MG) can reduce blood pressure and improve target organ damage. Nonetheless, its pharmacological targets and potential mechanisms of action remain inadequately elucidated.

Method: We used SwissTargetPrediction to identify α-MG's drug targets and DisGeNET, GeneCards, CTD, and GEO databases for hypertension-related targets, and then determined antihypertensive therapeutic targets of α-MG by intersecting these targets. GO functional enrichment analysis, KEGG pathway analysis, and disease association analysis were conducted using the DAVID database and R package "clusterprofile", visualized with Cytoscape software. The binding affinity of α-MG to identified targets was confirmed through molecular docking using Autodock Vina v.1.2.2 software. The impact of α-MG on target genes was validated using an Angiotensin II-induced hypertensive mouse model and RT-qPCR.

Results: A total of 51 potential antihypertensive therapeutic targets for α-MG were identified by intersecting 109 drug targets with 821 disease targets. Furthermore, 10 cellular component terms, 10 disease terms, and the top 20 enriched biological processes, molecular functions, and KEGG pathways related to α-MG's antihypertensive effects were documented. Molecular docking studies indicated a strong binding affinity of α-MG with the HSP90AA1 domain. In Ang II-induced hypertensive mice aorta, treatment with α-MG effectively reversed the aberrant mRNA expression of TNF, HSP90AA1, NFKB1, PPARG, SIRT1, PTGS2, and RELA.

Conclusion: Our analyses showed that TNF, HSP90AA1, NFKB1, PPARG, SIRT1, PTGS2, and RELA might be α-MG's potential therapeutic targets for hypertension, laying groundwork for further investigation into its pharmacological mechanisms and clinical uses.

背景:高血压是导致全球残疾和死亡的主要风险因素。有证据表明,α-芒果苷(α-MG)可以降低血压并改善靶器官损伤。然而,其药理靶点和潜在作用机制仍未得到充分阐明:方法:我们利用 SwissTargetPrediction 鉴定了 α-MG 的药物靶点,并利用 DisGeNET、GeneCards、CTD 和 GEO 数据库鉴定了高血压相关靶点,然后通过这些靶点的交叉确定了 α-MG 的抗高血压治疗靶点。利用DAVID数据库和R软件包 "clusterprofile "进行了GO功能富集分析、KEGG通路分析和疾病关联分析,并使用Cytoscape软件进行可视化。使用 Autodock Vina v.1.2.2 软件进行分子对接,确认了α-MG 与确定靶点的结合亲和力。利用血管紧张素 II 诱导的高血压小鼠模型和 RT-qPCR 验证了 α-MG 对靶基因的影响:结果:通过将 109 个药物靶点与 821 个疾病靶点交叉,共发现了 51 个潜在的α-MG 抗高血压治疗靶点。此外,还记录了与α-MG 抗高血压作用相关的 10 个细胞成分术语、10 个疾病术语以及前 20 个富集的生物过程、分子功能和 KEGG 通路。分子对接研究表明,α-MG 与 HSP90AA1 结构域有很强的结合亲和力。在 Ang II 诱导的高血压小鼠主动脉中,α-MG 能有效逆转 TNF、HSP90AA1、NFKB1、PPARG、SIRT1、PTGS2 和 RELA 的异常 mRNA 表达:我们的分析表明,TNF、HSP90AA1、NFKB1、PPARG、SIRT1、PTGS2和RELA可能是α-MG治疗高血压的潜在靶点,为进一步研究其药理机制和临床应用奠定了基础。
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引用次数: 0
Leveraging CAR macrophages targeting c-Met for precision immunotherapy in pancreatic cancer: insights from single-cell multi-omics. 利用靶向 c-Met 的 CAR 巨噬细胞对胰腺癌进行精准免疫治疗:单细胞多组学的启示。
IF 6 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-26 DOI: 10.1186/s10020-024-00996-4
Lingyu Hu, Xiaoguang Wang, Zhengwei Song, Fei Chen, Bin Wu

Background: Pancreatic cancer is known for its poor prognosis and resistance to conventional therapies, largely due to the presence of cancer stem cells (CSCs) and aggressive angiogenesis. Effectively targeting these CSCs and associated angiogenic pathways is crucial for effective treatment. This study leverages single-cell multi-omics to explore a novel therapeutic approach involving Chimeric Antigen Receptor (CAR) macrophages engineered to target the c-Met protein on pancreatic CSCs.

Methods: We employed single-cell RNA sequencing to analyze pancreatic cancer tissue, identifying c-Met as a key marker of CSCs. CAR macrophages were engineered using a lentiviral system to express a c-Met-specific receptor. The phagocytic efficiency of these CAR macrophages against pancreatic CSCs was assessed in vitro, along with their ability to inhibit angiogenesis. The in vivo efficacy of CAR macrophages was evaluated in a mouse model of pancreatic cancer.

Results: CAR macrophages demonstrated high specificity for c-Met + CSCs, significantly enhancing phagocytosis and reducing the secretion of angiogenic factors such as VEGFA, FGF2, and ANGPT. In vivo, these macrophages significantly suppressed tumor growth and angiogenesis, prolonging survival in pancreatic cancer-bearing mice.

Conclusion: CAR macrophages targeting c-Met represent a promising therapeutic strategy for pancreatic cancer, offering targeted elimination of CSCs and disruption of tumor angiogenesis. This study highlights the potential of single-cell multi-omics in guiding the development of precision immunotherapies.

背景:众所周知,胰腺癌预后不良且对传统疗法具有抗药性,这主要是由于存在癌症干细胞(CSC)和侵袭性血管生成。有效靶向这些癌干细胞和相关血管生成途径对有效治疗至关重要。本研究利用单细胞多组学来探索一种新的治疗方法,即利用嵌合抗原受体(CAR)巨噬细胞来靶向胰腺癌干细胞上的c-Met蛋白:我们采用单细胞 RNA 测序分析胰腺癌组织,发现 c-Met 是 CSCs 的关键标志物。我们利用慢病毒系统设计了 CAR 巨噬细胞,以表达 c-Met 特异性受体。在体外评估了这些 CAR 巨噬细胞对胰腺癌 CSCs 的吞噬效率及其抑制血管生成的能力。在胰腺癌小鼠模型中评估了 CAR 巨噬细胞的体内疗效:结果:CAR巨噬细胞对c-Met + CSCs具有高度特异性,能显著增强吞噬能力,减少血管生成因子(如VEGFA、FGF2和ANGPT)的分泌。在体内,这些巨噬细胞能明显抑制肿瘤生长和血管生成,延长胰腺癌小鼠的生存期:结论:靶向 c-Met 的 CAR 巨噬细胞是一种很有前景的胰腺癌治疗策略,它能有针对性地消灭 CSCs 并破坏肿瘤血管生成。这项研究凸显了单细胞多组学在指导精准免疫疗法开发方面的潜力。
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引用次数: 0
TWEAK/Fn14 disrupts Th17/Treg balance and aggravates conjunctivitis by inhibiting the Nrf2/HO-1 pathway in allergic conjunctivitis mice.
IF 6 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-26 DOI: 10.1186/s10020-024-01004-5
Yang Yang, Yuezhi Zhang, Jingfan Fu, Xiaolong Yin

Background: Allergic conjunctivitis (AC) affects people's daily life and work, especially the health of children. Although there are few relevant studies, Th17/Treg imbalance plays an important role in AC development. The aim of this study was to elucidate the effect of TWEAK/Fn14 on AC and Th17/Treg balance.

Methods: Ovalbumin induced AC mouse model was utilized to observe the mechanism of TWEAK/Fn14 in vivo. Conjunctivitis was evaluated by hematoxylin-eosin staining, toluidine blue staining and AC clinical score. Flow cytometry was used to measure Th17 and Treg cell ratios. The level of Th17/Treg balance related factors and Nrf2/HO-1 signal was detected by ELISA, WB, qRT-PCR and immunohistochemistry.

Results: In the AC state, disruption of Th17/Treg cell balance, increased TWEAK/Fn14 signaling level and conjunctival inflammation were observed. After TWEAK knockdown, Th17 cell differentiation was inhibited, Treg cell differentiation was promoted, and AC symptoms were alleviated in AC mice. Moreover, TWEAK knockdown caused an enhancement of the Nrf2/HO-1 signaling pathway in the AC models. Treatment with Nrf2 inhibitor reversed these changes induced by TWEAK knockdown. Therefore, TWEAK/Fn14 regulated the Nrf2/HO-1 pathway to affect Th17/Treg cell balance and conjunctivitis in AC mouse models.

Conclusion: In summary, TWEAK/Fn14 caused Th17/Treg imbalance by inhibiting Nrf2/HO-1 pathway, which might be one potential mechanism of the exacerbation of AC.

背景:过敏性结膜炎(AC)影响着人们的日常生活和工作,尤其是儿童的健康:过敏性结膜炎(AC)影响着人们的日常生活和工作,尤其是儿童的健康。尽管相关研究较少,但Th17/Treg失衡在过敏性结膜炎的发病中起着重要作用。本研究旨在阐明TWEAK/Fn14对AC和Th17/Treg平衡的影响:方法:利用卵清蛋白诱导的 AC 小鼠模型观察 TWEAK/Fn14 在体内的作用机制。通过苏木精-伊红染色、甲苯胺蓝染色和AC临床评分评估结膜炎。流式细胞术用于测量 Th17 细胞和 Treg 细胞的比例。通过ELISA、WB、qRT-PCR和免疫组化检测Th17/Treg平衡相关因子和Nrf2/HO-1信号的水平:结果:在AC状态下,观察到Th17/Treg细胞平衡被破坏、TWEAK/Fn14信号水平升高和结膜炎症。敲除 TWEAK 后,Th17 细胞分化受到抑制,Treg 细胞分化得到促进,AC 小鼠的 AC 症状得到缓解。此外,TWEAK敲除还增强了AC模型中的Nrf2/HO-1信号通路。用 Nrf2 抑制剂治疗可逆转 TWEAK 敲除引起的这些变化。因此,TWEAK/Fn14调节了Nrf2/HO-1通路,从而影响了AC小鼠模型中Th17/Treg细胞的平衡和结膜炎:总之,TWEAK/Fn14通过抑制Nrf2/HO-1通路导致Th17/Treg细胞失衡,这可能是AC恶化的潜在机制之一。
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引用次数: 0
TAT as a new marker and its use for noninvasive chemical biopsy in NASH diagnosis. TAT 作为一种新的标记物,可用于 NASH 诊断中的无创化学活检。
IF 6 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-26 DOI: 10.1186/s10020-024-00992-8
Sihyang Jo, Jin-Mo Kim, Minshu Li, Han Sun Kim, Yong Jin An, Sunghyouk Park

Background: Early diagnosis of Nonalcoholic steatohepatitis (NASH) is crucial to prevent its progression to hepatocellular carcinoma, but its gold standard diagnosis still requires invasive biopsy. Here, a new marker-based noninvasive chemical biopsy approach is introduced that uses urine-secreted tyrosine metabolites.

Methods: We first identified NASH-specific decrease in TAT expression, the first enzyme in the tyrosine degradation pathway (TDP), by employing exometabolome-transcriptome correlations, single-cell RNA -seq, and tissue staining on human NASH patient samples. A selective extrahepatic monitoring of the TAT activity was established by the chemical biopsy exploiting the enzyme's metabolic conversion of D2-tyrosine into D2-4HPP. The approach was applied to a NASH mouse model using the methionine-choline deficient diet, where urine D2-4HPP level was measured with a specific LC-MS detection, following oral administration of D2-tyrosine.

Results: The noninvasive urine chemical biopsy approach could effectively differentiate NASH from normal mice (normal = 14, NASH = 15, p = 0.0054), correlated with the NASH pathology and TAT level decrease observed with immunostaining on the liver tissue. In addition, we showed that the diagnostic differentiation could be enhanced by measuring the downstream metabolites of TDP. The specificity of the TAT and the related TDP enzymes in NASH were also addressed in other settings employing high fat high fructose mouse NASH model and human obesity vs. NASH cohort.

Conclusions: Overall, we propose TAT and TDP as pathology-relevant markers for NASH and present the urine chemical biopsy as a noninvasive modality to evaluate the NASH-specific changes in urine that may help the NASH diagnosis.

背景:非酒精性脂肪性肝炎(NASH)的早期诊断对防止其发展为肝细胞癌至关重要,但其金标准诊断仍需要侵入性活检。本文介绍了一种新的基于标记物的非侵入性化学活检方法,该方法使用尿液分泌的酪氨酸代谢物:我们首先利用外代谢组-转录组相关性、单细胞RNA-seq和对人类NASH患者样本的组织染色,确定了NASH特异性的酪氨酸降解途径(TDP)中第一个酶TAT表达的减少。通过化学活检,利用该酶将 D2-酪氨酸代谢转化为 D2-4HPP 的过程,建立了对 TAT 活性的肝外选择性监测。该方法被应用于采用蛋氨酸-胆碱缺乏饮食的 NASH 小鼠模型,在口服 D2-酪氨酸后,通过特定的 LC-MS 检测法测量尿液中的 D2-4HPP 水平:结果:无创尿液化学活检方法能有效区分NASH和正常小鼠(正常=14只,NASH=15只,P=0.0054),与NASH病理和肝组织免疫染色观察到的TAT水平下降相关。此外,我们还发现,通过测量 TDP 的下游代谢物可以提高诊断鉴别能力。我们还利用高脂肪高果糖小鼠 NASH 模型和人类肥胖与 NASH 队列,探讨了 TAT 和相关 TDP 酶在 NASH 中的特异性:总之,我们建议将 TAT 和 TDP 作为 NASH 的病理学相关标记物,并将尿液化学活检作为一种非侵入性方法来评估尿液中 NASH 特异性的变化,这可能有助于 NASH 的诊断。
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引用次数: 0
TIMP1 regulates ferroptosis in osteoblasts by inhibiting TFRC ubiquitination: an in vitro and in vivo study. TIMP1 通过抑制 TFRC 泛素化调节成骨细胞的铁变态反应:一项体外和体内研究。
IF 6 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-23 DOI: 10.1186/s10020-024-01000-9
Bo Peng, Zhiwei Feng, Ao Yang, Jinmin Liu, Jinwen He, Lihu Xu, Cong Tian, Xiaoyun Sheng, Yaobin Wang, Rongjin Chen, Xingwen Wang, Xiaojun Ren, Bin Geng, Yayi Xia

Background: In clinical practice, alterations in the internal environment of type 2 diabetes can significantly affect bone quality. While the increased risk of fractures among diabetic patients is well-established, the precise mechanisms by which hyperglycemia influences bone quality remain largely unclear.

Methods: Western blotting, immunohistochemistry (IHC), and micro-CT were used to examine ferroptosis-related protein expression and bone morphology changes in the bone tissues of type 2 diabetic mice. The CCK8 assay determined the optimal conditions for inducing ferroptosis in osteoblasts by high glucose and high fat (HGHF). Ferroptosis phenotypes in osteoblasts were analyzed using flow cytometry, Western blotting, and two-photon laser confocal microscopy. Transcriptomic sequencing of the control and HGHF groups, followed by bioinformatic analysis, identified and validated key genes. TIMP1 was knocked down in osteoblasts to assess its impact on ferroptosis, while TFRC expression was inhibited and activated to verify the role of TIMP1 in regulating ferroptosis through TFRC. The therapeutic effect of TIMP1 inhibition on osteoporosis was evaluated in a type 2 diabetic mouse model.

Results: The expression of TIMP1 is increased in type 2 diabetic osteoporosis. In vitro, TIMP1 knockout inhibited ferroptosis in osteoblasts induced by high glucose and high fat (HGHF). However, overexpression of TFRC reversed the ferroptosis inhibition caused by TIMP1 knockout. Suppression of TIMP1 expression alleviated the progression of osteoporosis in type 2 diabetic mice. Mechanistic studies suggest that TIMP1 regulates HGHF-induced ferroptosis in osteoblasts through TFRC.

Conclusion: This study demonstrates that TIMP1 expression is increased during type 2 diabetic osteoporosis and that TIMP1 promotes ferroptosis in osteoblasts by regulating TFRC. These findings suggest that TIMP1 is a promising novel therapeutic target for type 2 diabetic osteoporosis.

背景:在临床实践中,2 型糖尿病患者体内环境的改变会严重影响骨质。虽然糖尿病患者骨折风险增加已是公认的事实,但高血糖影响骨质的确切机制在很大程度上仍不清楚:方法:采用 Western 印迹、免疫组化(IHC)和显微 CT 技术检测 2 型糖尿病小鼠骨组织中与铁蛋白沉积相关的蛋白表达和骨形态变化。CCK8测定确定了高糖高脂(HGHF)诱导成骨细胞铁变态反应的最佳条件。使用流式细胞术、Western印迹法和双光子激光共聚焦显微镜分析了成骨细胞的铁变态表型。对对照组和 HGHF 组进行转录组测序,然后进行生物信息学分析,确定并验证了关键基因。在成骨细胞中敲除TIMP1以评估其对铁凋亡的影响,同时抑制和激活TFRC的表达以验证TIMP1通过TFRC调控铁凋亡的作用。在 2 型糖尿病小鼠模型中评估了抑制 TIMP1 对骨质疏松症的治疗效果:结果:在 2 型糖尿病骨质疏松症中,TIMP1 的表达增加。在体外,TIMP1 基因敲除可抑制高糖高脂(HGHF)诱导的成骨细胞铁突变。然而,过表达 TFRC 可逆转 TIMP1 基因敲除引起的铁析出抑制。抑制 TIMP1 的表达可缓解 2 型糖尿病小鼠骨质疏松症的进展。机理研究表明,TIMP1通过TFRC调节HGHF诱导的成骨细胞铁变态反应:本研究表明,TIMP1 的表达在 2 型糖尿病骨质疏松症期间增加,并且 TIMP1 通过调节 TFRC 促进成骨细胞的铁析出。这些发现表明,TIMP1 是治疗 2 型糖尿病骨质疏松症的一个很有前景的新靶点。
{"title":"TIMP1 regulates ferroptosis in osteoblasts by inhibiting TFRC ubiquitination: an in vitro and in vivo study.","authors":"Bo Peng, Zhiwei Feng, Ao Yang, Jinmin Liu, Jinwen He, Lihu Xu, Cong Tian, Xiaoyun Sheng, Yaobin Wang, Rongjin Chen, Xingwen Wang, Xiaojun Ren, Bin Geng, Yayi Xia","doi":"10.1186/s10020-024-01000-9","DOIUrl":"10.1186/s10020-024-01000-9","url":null,"abstract":"<p><strong>Background: </strong>In clinical practice, alterations in the internal environment of type 2 diabetes can significantly affect bone quality. While the increased risk of fractures among diabetic patients is well-established, the precise mechanisms by which hyperglycemia influences bone quality remain largely unclear.</p><p><strong>Methods: </strong>Western blotting, immunohistochemistry (IHC), and micro-CT were used to examine ferroptosis-related protein expression and bone morphology changes in the bone tissues of type 2 diabetic mice. The CCK8 assay determined the optimal conditions for inducing ferroptosis in osteoblasts by high glucose and high fat (HGHF). Ferroptosis phenotypes in osteoblasts were analyzed using flow cytometry, Western blotting, and two-photon laser confocal microscopy. Transcriptomic sequencing of the control and HGHF groups, followed by bioinformatic analysis, identified and validated key genes. TIMP1 was knocked down in osteoblasts to assess its impact on ferroptosis, while TFRC expression was inhibited and activated to verify the role of TIMP1 in regulating ferroptosis through TFRC. The therapeutic effect of TIMP1 inhibition on osteoporosis was evaluated in a type 2 diabetic mouse model.</p><p><strong>Results: </strong>The expression of TIMP1 is increased in type 2 diabetic osteoporosis. In vitro, TIMP1 knockout inhibited ferroptosis in osteoblasts induced by high glucose and high fat (HGHF). However, overexpression of TFRC reversed the ferroptosis inhibition caused by TIMP1 knockout. Suppression of TIMP1 expression alleviated the progression of osteoporosis in type 2 diabetic mice. Mechanistic studies suggest that TIMP1 regulates HGHF-induced ferroptosis in osteoblasts through TFRC.</p><p><strong>Conclusion: </strong>This study demonstrates that TIMP1 expression is increased during type 2 diabetic osteoporosis and that TIMP1 promotes ferroptosis in osteoblasts by regulating TFRC. These findings suggest that TIMP1 is a promising novel therapeutic target for type 2 diabetic osteoporosis.</p>","PeriodicalId":18813,"journal":{"name":"Molecular Medicine","volume":"30 1","pages":"226"},"PeriodicalIF":6.0,"publicationDate":"2024-11-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11585138/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142693292","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
DsbA-L activates TGF-β1/SMAD3 signaling and M2 macrophage polarization by stimulating AKT1 and NLRP3 to promote pulmonary fibrosis. DsbA-L 通过刺激 AKT1 和 NLRP3 激活 TGF-β1/SMAD3 信号和 M2 巨噬细胞极化,从而促进肺纤维化。
IF 6 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-23 DOI: 10.1186/s10020-024-00983-9
Juan Wang, Zhenkun Xia, Bei Qing, Ying Chen, Linguo Gu, Hongzuo Chen, Zhenglian Ge, Yunchang Yuan

Background: Pulmonary fibrosis (PF) is a progressive and difficult-to-heal lung disease that poses a significant threat to human life and health. This study aimed to investigate the potential pathological mechanisms of PF and to identify new avenues for the treatment of PF.

Methods: Clinical samples were collected to assess the effect of disulfide-bond A oxidoreductase-like protein (DsbA-L) on PF. TGF-β1-induced MLE-12 cell model and bleomycin (BLM)-induced mice model were established. Changes in physiological morphology and fibrosis were observed in the lung tissues. The degree of apoptosis and the mitochondrial function was analyzed. The expression of relative cytokines was examined. The CD68+/CD206+ ratio was determined to indicate M2 macrophage polarization.

Results: The expression of DsbA-L was upregulated in patients with PF and PF-like models. In vitro, DsbA-L overexpression exacerbated TGF-β1-induced the deposition of extracellular matrix (ECM), apoptosis, inflammation, and mitochondrial damage, whereas DsbA-L silencing exerted the opposite effects. DsbA-L silencing inhibited the activation of AKT1, NLRP3, and SMAD3 by TGF-β1. MLE-12 cells silencing DsbA-L limited the polarization of RAW264.7 cells towards the M2 phenotype. AKT1 agonist or NLRP3 agonist reversed the role of DsbA-L silencing in inhibiting the TGF-β1/SMAD3 pathway and M2 macrophage polarization. In vivo, DsbA-L knockout protected mice from PF-like pathological damage caused by BLM.

Conclusion: DsbA-L exhibited a significant profibrotic effect in lung epithelial cells and mice, which increased the levels of AKT1 and NLRP3 to activate the TGF-β1/SMAD3 pathway and M2 macrophage polarization. These findings could shed light on new clues for comprehension and treatment of PF.

背景:肺纤维化(PF)是一种进展性、难以治愈的肺部疾病,对人类的生命和健康构成严重威胁。本研究旨在探究肺纤维化的潜在病理机制,并找出治疗肺纤维化的新途径:方法:收集临床样本,评估二硫键 A 氧化还原酶样蛋白(DsbA-L)对 PF 的影响。建立了 TGF-β1 诱导的 MLE-12 细胞模型和博莱霉素(BLM)诱导的小鼠模型。观察到肺组织生理形态和纤维化的变化。对细胞凋亡程度和线粒体功能进行了分析。还检测了相对细胞因子的表达。测定了 CD68+/CD206+ 比率,以显示 M2 巨噬细胞极化:结果:DsbA-L在PF患者和PF样模型中表达上调。在体外,DsbA-L 的过表达加剧了 TGF-β1 诱导的细胞外基质(ECM)沉积、细胞凋亡、炎症和线粒体损伤,而 DsbA-L 的沉默则产生了相反的效果。沉默 DsbA-L 可抑制 TGF-β1 对 AKT1、NLRP3 和 SMAD3 的激活。沉默 DsbA-L 的 MLE-12 细胞限制了 RAW264.7 细胞向 M2 表型的极化。AKT1激动剂或NLRP3激动剂逆转了DsbA-L沉默在抑制TGF-β1/SMAD3通路和M2巨噬细胞极化中的作用。在体内,DsbA-L基因敲除保护小鼠免受BLM引起的PF样病理损伤:结论:DsbA-L对肺上皮细胞和小鼠有明显的损伤作用,可提高AKT1和NLRP3水平,激活TGF-β1/SMAD3通路和M2巨噬细胞极化。这些发现为理解和治疗 PF 提供了新的线索。
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引用次数: 0
Co-culture of human AT2 cells with fibroblasts reveals a MUC5B phenotype: insights from an organoid model. 人 AT2 细胞与成纤维细胞的共培养揭示了 MUC5B 表型:类器官模型的启示。
IF 6 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-23 DOI: 10.1186/s10020-024-00990-w
Yiwen Yao, Felix Ritzmann, Sarah Miethe, Kathrin Kattler-Lackes, Betül Colakoglu, Christian Herr, Andreas Kamyschnikow, Michelle Brand, Holger Garn, Daniela Yildiz, Frank Langer, Robert Bals, Christoph Beisswenger

Impaired interaction of fibroblasts with pneumocytes contributes to the progression of chronic lung disease such as idiopathic pulmonary fibrosis (IPF). Mucin 5B (MUC5B) is associated with IPF. Here we analyzed the interaction of primary fibroblasts and alveolar type 2 (AT2) pneumocytes in the organoid model. Single-cell analysis, histology, and qRT-PCR revealed that fibroblasts expressing high levels of fibrosis markers regulate STAT3 signaling in AT2 cells, which is accompanied by cystic organoid growth and MUC5B expression. Cystic growth and MUC5B expression were also caused by the cytokine IL-6. The PI3K-Akt signaling pathway was activated in fibroblasts. The drug dasatinib prevented the formation of MUC5B-expressing cystic organoids. MUC5B associated with AT2 cells in samples obtained from IPF patients. Our model shows that fibrotic primary fibroblasts induce impaired differentiation of AT2 cells via STAT3 signaling pathways, as observed in IPF patients. It can be used for mechanistic studies and drug development.

成纤维细胞与肺细胞的相互作用受损是特发性肺纤维化(IPF)等慢性肺病恶化的原因之一。粘蛋白5B(MUC5B)与特发性肺纤维化有关。在这里,我们分析了原代成纤维细胞和肺泡2型(AT2)肺细胞在类器官模型中的相互作用。单细胞分析、组织学和qRT-PCR显示,表达高水平纤维化标志物的成纤维细胞会调节AT2细胞中的STAT3信号,而STAT3信号会伴随囊性类器官生长和MUC5B的表达。囊性生长和 MUC5B 的表达也是由细胞因子 IL-6 引起的。成纤维细胞中的PI3K-Akt信号通路被激活。药物达沙替尼阻止了表达MUC5B的囊性器官组织的形成。在IPF患者的样本中,MUC5B与AT2细胞相关。我们的模型表明,纤维化的原发性成纤维细胞通过STAT3信号通路诱导AT2细胞分化受损,这在IPF患者中也能观察到。该模型可用于机理研究和药物开发。
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引用次数: 0
Expression of senescence-related CD161 promotes extranodal NK/T cell lymphoma by affecting T cell phenotype and cell cycle. 衰老相关 CD161 的表达会影响 T 细胞表型和细胞周期,从而促进结节外 NK/T 细胞淋巴瘤的发生。
IF 6 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-23 DOI: 10.1186/s10020-024-00969-7
Chengxun Jin, Xin Li, Chaohe Zhang

Purpose: The intention of this work is to probe the role of senescence-related gene CD161 in extranodal NK/T cell lymphoma (ENKTL).

Methods: This study used H2O2 to establish three distinct in vitro oxidative stress aging models (NKL, SNT-8, and YT). Western blotting was employed to assess the levels of two iconic aging proteins, MMP1 and P53, and flow cytometry was utilized to investigate cell cycle and the expressions of CD4, CD8, and CD161. Cell viability was evaluated via the CCK-8 assay. The transcriptome analysis assessed the differential gene expression between the control and aging group of NKL. In vivo, we established a BALB/c mice aging tumor model. After 15 days, the mice were euthanized to harvest tumors. ELISA was employed to measure aging indicators in the mouse tissues. Flow cytometry was utilized to assess the levels of CD4, CD8, and CD161 in tumor samples. Hematoxylin-eosin (HE) staining was performed to evaluate the structure and cellular morphology of the tumor tissue.

Results: In the NKL, SNT-8 and YT aging models, the levels of MMP1 and P53 proteins were significantly increased. Flow cytometry results indicated that all three cell types exhibited marked arrest in the G1 phase. Compared with the control group, the expressions of CD4 and CD161 in the aging group were significantly increased, while the expression of CD8 was decreased. Transcriptome analysis revealed 2,843 differentially expressed genes (DEGs) between the control and aging groups, with 2,060 up-regulated and 783 down-regulated genes identified. Following CD161 knockdown, cell viability of three cell types in the aging group was significantly reduced compared to the control group. The G1 phase of the cells was significantly interrupted. The expressions of CD4 and CD161 were significantly increased, and the expression of CD8 was decreased. However, in the aging + si-CD161 group, a partial alleviation of oxidative stress was observed with a reduction in CD161 expression levels. Animal experiments demonstrated that knockout of CD161 can inhibit tumor progression and partially mitigate oxidative stress.

Conclusions: CD161 may inhibit ENKTL tumor development by regulating cell cycle and T-cell phenotype.

目的:本研究旨在探讨衰老相关基因 CD161 在结外 NK/T 细胞淋巴瘤(ENKTL)中的作用:本研究使用 H2O2 建立了三种不同的体外氧化应激衰老模型(NKL、SNT-8 和 YT)。采用 Western 印迹法评估两种标志性衰老蛋白 MMP1 和 P53 的水平,并利用流式细胞术研究细胞周期以及 CD4、CD8 和 CD161 的表达。细胞活力通过 CCK-8 检测法进行评估。转录组分析评估了对照组和衰老组 NKL 基因表达的差异。在体内,我们建立了一个 BALB/c 小鼠衰老肿瘤模型。15 天后,小鼠被安乐死以收获肿瘤。采用酶联免疫吸附法测定小鼠组织中的衰老指标。流式细胞术用于评估肿瘤样本中 CD4、CD8 和 CD161 的水平。对肿瘤组织的结构和细胞形态进行苏木精-伊红(HE)染色:结果:在NKL、SNT-8和YT衰老模型中,MMP1和P53蛋白水平明显升高。流式细胞术结果表明,这三种类型的细胞都明显停滞在 G1 期。与对照组相比,老化组 CD4 和 CD161 的表达量明显增加,而 CD8 的表达量减少。转录组分析显示,对照组和衰老组之间存在2843个差异表达基因(DEGs),其中上调基因2060个,下调基因783个。与对照组相比,CD161敲除后,衰老组三种细胞类型的细胞活力明显降低。细胞的 G1 期明显中断。CD4 和 CD161 的表达明显增加,CD8 的表达减少。然而,在衰老 + si-CD161 组中,随着 CD161 表达水平的降低,氧化应激也得到了部分缓解。动物实验表明,敲除 CD161 可抑制肿瘤进展并部分缓解氧化应激:CD161可通过调节细胞周期和T细胞表型抑制ENKTL肿瘤的发展。
{"title":"Expression of senescence-related CD161 promotes extranodal NK/T cell lymphoma by affecting T cell phenotype and cell cycle.","authors":"Chengxun Jin, Xin Li, Chaohe Zhang","doi":"10.1186/s10020-024-00969-7","DOIUrl":"10.1186/s10020-024-00969-7","url":null,"abstract":"<p><strong>Purpose: </strong>The intention of this work is to probe the role of senescence-related gene CD161 in extranodal NK/T cell lymphoma (ENKTL).</p><p><strong>Methods: </strong>This study used H<sub>2</sub>O<sub>2</sub> to establish three distinct in vitro oxidative stress aging models (NKL, SNT-8, and YT). Western blotting was employed to assess the levels of two iconic aging proteins, MMP1 and P53, and flow cytometry was utilized to investigate cell cycle and the expressions of CD4, CD8, and CD161. Cell viability was evaluated via the CCK-8 assay. The transcriptome analysis assessed the differential gene expression between the control and aging group of NKL. In vivo, we established a BALB/c mice aging tumor model. After 15 days, the mice were euthanized to harvest tumors. ELISA was employed to measure aging indicators in the mouse tissues. Flow cytometry was utilized to assess the levels of CD4, CD8, and CD161 in tumor samples. Hematoxylin-eosin (HE) staining was performed to evaluate the structure and cellular morphology of the tumor tissue.</p><p><strong>Results: </strong>In the NKL, SNT-8 and YT aging models, the levels of MMP1 and P53 proteins were significantly increased. Flow cytometry results indicated that all three cell types exhibited marked arrest in the G1 phase. Compared with the control group, the expressions of CD4 and CD161 in the aging group were significantly increased, while the expression of CD8 was decreased. Transcriptome analysis revealed 2,843 differentially expressed genes (DEGs) between the control and aging groups, with 2,060 up-regulated and 783 down-regulated genes identified. Following CD161 knockdown, cell viability of three cell types in the aging group was significantly reduced compared to the control group. The G1 phase of the cells was significantly interrupted. The expressions of CD4 and CD161 were significantly increased, and the expression of CD8 was decreased. However, in the aging + si-CD161 group, a partial alleviation of oxidative stress was observed with a reduction in CD161 expression levels. Animal experiments demonstrated that knockout of CD161 can inhibit tumor progression and partially mitigate oxidative stress.</p><p><strong>Conclusions: </strong>CD161 may inhibit ENKTL tumor development by regulating cell cycle and T-cell phenotype.</p>","PeriodicalId":18813,"journal":{"name":"Molecular Medicine","volume":"30 1","pages":"230"},"PeriodicalIF":6.0,"publicationDate":"2024-11-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11585959/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142695733","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mbnl1-mediated alternative splicing of circMlxipl regulates Rbbp6-involved ChREBP turnover to inhibit lipotoxicity-induced β-cell damage. Mbnl1介导的circMlxipl替代剪接调节Rbbp6参与的ChREBP周转,从而抑制脂肪毒性诱导的β细胞损伤。
IF 6 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-23 DOI: 10.1186/s10020-024-00991-9
Yingying Gong, Meilin Wei, Xiaopei Cao, Changliu Xu, Jiewen Jin, Ling Pei, Yanbing Li, Haipeng Xiao, Liting Wu

Background: Diabetes, a global epidemic, is the leading cause of mortality globally. The aim of this study is to get better understanding of pathophysiology of diabetes.

Methods: Palmitic acid (PA)-treated β-cells, db/db mice and high fat diet (HFD)-fed mouse model of type 2 diabetes were established. H&E was used to assess the histological changes of pancreas. IHC, FISH, western blot or qRT-PCR was employed to detect the expression of key molecules in primary islets or lipotoxic β-cells. Cell behaviors were detected by MTT, EdU incorporation assay, TUNEL assay and glucose-induced insulin secretion (GSIS). The associations among circMlxipl, Mbnl1 and Rbbp6 were validated by RIP and RNA pull-down assays, and the direct binding between Hdac3 and Mbnl1 promoter was examined by ChIP and luciferase assays. Co-IP was employed to assess the interaction between ChREBP and Rbbp6, as well as the ubiquitination of ChREBP.

Results: Hdac3 and ChREBP were upregulated, but Mbnl1 and circMlxipl were downregulated in islets from diabetic mice and lipotoxic β-cells. Mbnl1 overexpression protected against PA-induced impairments in lipotoxic β-cells through modulating back-splicing of circMlxipl and suppressing ChREBP. Hdac3 served as a transcriptional repressor of Mbnl1, and it was implicated in circMlxipl-mediated protection via regulating ChREBP expression in lipotoxic β-cells. Lack of circMlxipl inhibited Rbbp6-mediated ubiquitin-proteasomal degradation of ChREBP in lipotoxic β-cells. In vivo studies revealed that Hdac3 knockdown or Mbnl1 overexpression alleviated diabetes symptoms through circMlxipl-regulated ChREBP in diabetic mice.

Conclusion: Mbnl1-mediated alternative splicing of circMlxipl regulates Rbbp6-involved ChREBP turnover to inhibit lipotoxicity-induced β-cell damage.

背景:糖尿病是一种全球性流行病,是导致全球死亡的主要原因。本研究旨在更好地了解糖尿病的病理生理学:方法:建立棕榈酸(PA)处理的β细胞、db/db小鼠和高脂饮食(HFD)喂养的2型糖尿病小鼠模型。用 H&E 评估胰腺的组织学变化。采用IHC、FISH、western blot或qRT-PCR检测原代胰岛或脂肪毒性β细胞中关键分子的表达。细胞行为通过 MTT、EdU 结合试验、TUNEL 试验和葡萄糖诱导胰岛素分泌(GSIS)进行检测。RIP 和 RNA pull-down 试验验证了 circMlxipl、Mbnl1 和 Rbbp6 之间的关联,ChIP 和荧光素酶试验检验了 Hdac3 与 Mbnl1 启动子的直接结合。采用 Co-IP 方法评估了 ChREBP 与 Rbbp6 之间的相互作用以及 ChREBP 的泛素化:结果:在糖尿病小鼠的胰岛和脂毒性β细胞中,Hdac3和ChREBP上调,但Mbnl1和circMlxipl下调。通过调节circMlxipl的反向拼接和抑制ChREBP,Mbnl1的过表达保护了脂肪毒性β细胞免受PA诱导的损伤。Hdac3是Mbnl1的转录抑制因子,它通过调节脂毒性β细胞中ChREBP的表达参与了circMlxipl介导的保护作用。缺乏 circMlxipl 会抑制 Rbbp6 介导的脂毒性 β 细胞中 ChREBP 的泛素-蛋白酶体降解。体内研究显示,Hdac3敲除或Mbnl1过表达可通过circMlxipl调控糖尿病小鼠的ChREBP缓解糖尿病症状:结论:Mbnl1介导的circMlxipl替代剪接调节Rbbp6参与的ChREBP周转,从而抑制脂毒性诱导的β细胞损伤。
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引用次数: 0
Exploring Smad5: a review to pave the way for a deeper understanding of the pathobiology of common respiratory diseases. 探索 Smad5:为深入了解常见呼吸道疾病的病理生物学铺平道路的综述。
IF 6 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-22 DOI: 10.1186/s10020-024-00961-1
Zeqiang Lin, Jiayu Zhuang, Lixia He, Siyuan Zhu, Weiguo Kong, Wenju Lu, Zili Zhang

Smad5 (small mothers against decapentaplegic 5) protein is a receptor-regulated member of the Smad family proteins, mainly participating in the bone morphogenetic protein (BMP) signaling pathway in its phosphorylated form. This article will provide a detailed review of Smad5, focusing on its gene characteristics, protein structure, and subcellular localization properties. We will also explore the related signaling pathways and the mechanisms of Smad5 in respiratory diseases, including chronic obstructive pulmonary disease (COPD), bronchial asthma, pulmonary arterial hypertension(PAH), lung cancer, and idiopathic pulmonary fibrosis (IPF). Additionally, the review will cover aspects such as proliferation, differentiation, apoptosis, anti-fibrosis, and mitochondrial function metabolism. In addition, the review will cover aspects of proliferation, differentiation, apoptosis, anti-fibrosis and functional mitochondrial metabolism related to the above topics. Numerous studies suggest that Smad5 may play a unique and important role in the pathogenesis of respiratory system diseases. However, in previous research, Smad5 was mainly used to broadly determine the activation of the BMP signaling pathway, and its own function has not been given much attention. It is worth noting that Smad5 has distinct nuclear-cytoplasmic distribution characteristics different from Smad1 and Smad8. It can undergo significant nuclear-cytoplasmic shuttling when intracellular pH (pHi) changes, playing important roles in both the classical BMP signaling pathway and non-BMP signaling pathways. Given that Smad5 can move intracellularly in response to changes in physicochemical properties, its cellular localization may play a crucial role in the development of respiratory diseases. This article will explore the possibility that its distribution characteristics may be an important factor that is easily overlooked and not adequately considered in disease research.

Smad5(small mothers against decapentaplegic 5)蛋白是受体调控的Smad家族蛋白,主要以磷酸化形式参与骨形态发生蛋白(BMP)信号通路。本文将对 Smad5 进行详细综述,重点介绍其基因特征、蛋白结构和亚细胞定位特性。我们还将探讨相关的信号通路以及 Smad5 在呼吸系统疾病(包括慢性阻塞性肺疾病(COPD)、支气管哮喘、肺动脉高压(PAH)、肺癌和特发性肺纤维化(IPF))中的作用机制。此外,综述还将涉及增殖、分化、凋亡、抗纤维化和线粒体功能代谢等方面。此外,综述还将涉及与上述主题相关的增殖、分化、凋亡、抗纤维化和线粒体功能代谢等方面。大量研究表明,Smad5 在呼吸系统疾病的发病机制中可能扮演着独特而重要的角色。然而,在以往的研究中,Smad5 主要用于广泛确定 BMP 信号通路的激活情况,其自身的功能并未受到重视。值得注意的是,与 Smad1 和 Smad8 不同,Smad5 具有明显的核-胞质分布特征。当细胞内 pH 值(pHi)发生变化时,它可以在细胞核-细胞质之间发生显著的穿梭,在经典的 BMP 信号通路和非 BMP 信号通路中都发挥着重要作用。鉴于 Smad5 可随理化性质的变化而在细胞内移动,其细胞定位可能在呼吸系统疾病的发生发展中起着至关重要的作用。本文将探讨其分布特征可能是疾病研究中容易被忽视和未充分考虑的一个重要因素。
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引用次数: 0
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Molecular Medicine
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