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Analysis of hemopexin plasma levels in patients with age-related macular degeneration. 老年性黄斑变性患者血凝素水平分析。
IF 2.2 3区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01
Susette Lauwen, Bjorn Bakker, Eiko K de Jong, Sascha Fauser, Carel B Hoyng, Dirk J Lefeber, Anneke I den Hollander

Purpose: A protein quantitative trait locus (pQTL) analysis recently revealed a strong association between hemopexin (HPX) levels and genetic variants at the complement factor H (CFH) locus. In this study, we aimed to determine HPX plasma levels in patients with age-related macular degeneration (AMD) and to compare them with those in controls. We also investigated whether genetic variants at the CFH locus are associated with HPX plasma levels.

Methods: HPX levels were quantified in 200 advanced AMD cases and 200 controls using an enzyme-linked immunosorbent assay and compared between the two groups. Furthermore, HPX levels were analyzed per genotype group of three HPX-associated variants (rs61818956, rs10494745, and rs10801582) and four AMD-associated variants (rs794362 [proxy for rs187328863], rs570618, rs10922109, and rs61818924 [proxy for rs61818925]) at the CFH locus.

Results: HPX levels were similar in the control group compared with the AMD group. The three variants at the CFH locus, which were previously associated with the HPX levels, showed no association with the HPX levels in our data set. No significant differences in HPX levels were detected between the different genotype groups of AMD-associated variants at the CFH locus.

Conclusions: In this study, HPX levels were not associated with AMD or AMD-associated variants at the CFH locus. The finding of a previous pQTL study that variants at the CFH locus were associated with HPX levels was also not confirmed in this study.

目的:一项蛋白质数量性状位点(pQTL)分析最近揭示了补体因子H (CFH)位点的遗传变异与血凝素(HPX)水平之间的密切关联。在本研究中,我们旨在测定年龄相关性黄斑变性(AMD)患者的HPX血浆水平,并与对照组进行比较。我们还研究了CFH位点的遗传变异是否与HPX血浆水平相关。方法:采用酶联免疫吸附法定量测定200例晚期AMD患者和200例对照组患者的HPX水平,并进行比较。此外,我们还分析了CFH位点上3个HPX相关变异(rs61818956、rs10494745和rs10801582)和4个amd相关变异(rs794362 [rs187328863的代用基因]、rss570618、rs10922109和rs61818924 [rs61818925的代用基因])的HPX水平。结果:AMD组与对照组HPX水平相近。CFH位点的三个变异,之前与HPX水平相关,在我们的数据集中没有显示与HPX水平相关。CFH位点amd相关变异的不同基因型组间HPX水平无显著差异。结论:在本研究中,HPX水平与CFH位点的AMD或AMD相关变异无关。先前的一项pQTL研究发现,CFH位点的变异与HPX水平相关,但在本研究中也未得到证实。
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引用次数: 0
Autosomal dominant retinitis pigmentosa with incomplete penetrance due to an intronic mutation of the PRPF31 gene. 常染色体显性视网膜色素变性与不完全外显性由于内含子突变的PRPF31基因。
IF 2.2 3区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01
Tahleel Ali-Nasser, Shiri Zayit-Soudry, Eyal Banin, Dror Sharon, Tamar Ben-Yosef
<p><strong>Purpose: </strong>To identify the molecular mechanisms of the development of autosomal dominant retinitis pigmentosa (adRP) with incomplete penetrance in an Israeli Muslim Arab family.</p><p><strong>Methods: </strong>Two patients with adRP underwent a detailed ophthalmic evaluation, including funduscopic examination, visual field testing, optical coherence tomography, and electroretinography. Genetic analysis was performed using a combination of whole exome sequencing (WES) and Sanger sequencing. The pathogenicity of the identified intronic variant was evaluated in silico using several web-based tools, in vitro using a minigene-based assay, and in vivo using reverse transcription PCR analysis of lymphocyte-derived RNA. The relative abundance of alternatively spliced transcripts was evaluated using amplicon-based next-generation sequencing. The relative expression levels of <i>PRPF31</i> and <i>CNOT3</i> were measured using quantitative PCR (qPCR) analysis.</p><p><strong>Results: </strong>The two patients recruited in this study had childhood-onset RP, with night blindness as the initial symptom, followed by concentric restriction of the visual field. The funduscopic findings included narrowed retinal blood vessels and peripheral bone spicule pigmentation. By the third decade of life, the full-field electroretinography findings had been remarkably attenuated. In these patients, we identified a novel heterozygous intronic variant at position +5 of <i>PRPF31</i> intron 11 (c.1146+5G>T). The same variant was also detected in one asymptomatic family member. Through in silico analysis, the variant was predicted to alter the splicing of intron 11. An in vitro splicing assay and a reverse transcription PCR analysis of lymphocyte-derived RNA revealed that the mutant allele yielded mainly a shorter transcript in which exon 11 was skipped. The skipping of exon 11 was expected to cause a frameshift and an aberrant truncated protein (p.Tyr359Ser<i>fs</i>*29). The qPCR analysis revealed reduced <i>PRPF31</i> expression levels in the mutation carriers, without a significant difference between the affected patient and his asymptomatic brother. We evaluated several factors that have been suggested to correlate with non-penetrance of <i>PRPF31</i> mutations, including the number of cis-acting MSR1 elements adjacent to the <i>PRPF31</i> core promoter, <i>CNOT3</i> expression level, and <i>CNOT3</i> rs4806718 single-nucleotide polymorphism. None of these factors correlated with non-penetrance in the family in this study.</p><p><strong>Conclusions: </strong>We report a novel intronic mutation in <i>PRPF31</i> underlying adRP. This report expands the spectrum of pathogenic mutations in <i>PRPF31</i> and further demonstrates the importance of intronic mutations. Moreover, it demonstrates the phenomenon of incomplete penetrance previously associated with <i>PRPF31</i> mutations. The fact that the non-penetrance in the family in this study could not be explain
目的:探讨不完全外显性常染色体显性视网膜色素变性(adRP)在以色列穆斯林阿拉伯家族中的发病机制。方法:对2例adRP患者进行了详细的眼科检查,包括眼底检查、视野测试、光学相干断层扫描和视网膜电图。遗传分析采用全外显子组测序(WES)和Sanger测序。鉴定出的内含子变异的致病性使用几种基于网络的工具进行了计算机评估,在体外使用基于微基因的测定,在体内使用淋巴细胞来源RNA的反转录PCR分析。选择性剪接转录本的相对丰度使用基于扩增子的下一代测序进行评估。采用定量PCR (qPCR)检测PRPF31和CNOT3的相对表达量。结果:本研究纳入的2例患者均为儿童期发病的RP,以夜盲症为首发症状,随后出现视野同心受限。眼底检查结果包括视网膜血管狭窄和周围骨刺色素沉着。到了生命的第三个十年,全视场视网膜电图的发现已经明显减弱。在这些患者中,我们在PRPF31内含子11 +5位置发现了一个新的杂合内含子变异(c.1146+5G>T)。在一名无症状的家庭成员中也检测到相同的变异。通过计算机分析,预测该变异会改变内含子11的剪接。体外剪接实验和淋巴细胞源性RNA的反转录PCR分析显示,突变等位基因主要产生一个较短的转录本,其中外显子11被跳过。预计外显子11的跳过会导致移码和异常截断蛋白(p.Tyr359Serfs*29)。qPCR分析显示突变携带者的PRPF31表达水平降低,受影响患者与其无症状兄弟之间无显著差异。我们评估了与PRPF31突变非外显性相关的几个因素,包括PRPF31核心启动子附近的顺式作用MSR1元件的数量、CNOT3表达水平和CNOT3 rs4806718单核苷酸多态性。在本研究中,这些因素都与家族的非外显性无关。结论:我们报道了一种新的PRPF31内含子突变,该突变是adRP的基础。本报告扩展了PRPF31的致病突变谱,并进一步证明了内含子突变的重要性。此外,它还证明了先前与PRPF31突变相关的不完全外显率现象。在本研究中,该家族的非外显性无法用任何已知机制来解释,这一事实表明,一种新的PRPF31外显性修饰子可能起到了作用。
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引用次数: 0
Novel segmentation algorithm for high-throughput analysis of spectral domain-optical coherence tomography imaging of teleost retinas. 硬骨鱼视网膜光谱域光学相干断层成像高通量分析的新分割算法。
IF 2.2 3区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01
Kent R Barter, Hélène Paradis, Robert L Gendron, Josué A Lily Vidal, Oscar Meruvia-Pastor

Spectral domain-optical coherence tomography (SD-OCT) has become an essential tool for assessing ocular tissues in live subjects and conducting research on ocular development, health, and disease. The processing of SD-OCT images, particularly those from non-mammalian species, is a labor-intensive manual process due to a lack of automated analytical programs. This paper describes the development and implementation of a novel computer algorithm for the quantitative analysis of SD-OCT images of live teleost eyes. Automated segmentation processing of SD-OCT images of retinal layers was developed using a novel algorithm based on thresholding. The algorithm measures retinal thickness characteristics in a large volume of imaging data of teleost ocular structures in a short time, providing increased accuracy and repeatability of SD-OCT image analysis over manual measurements. The algorithm also generates hundreds of retinal thickness measurements per image for a large number of images for a given dataset. Meanwhile, heat mapping software that plots SD-OCT image measurements as a color gradient was also created. This software directly converts the measurements of each processed image to represent changes in thickness across the whole retinal scan. It also enables 2D and 3D visualization of retinal thickness across the scan, facilitating specimen comparison and localization of areas of interest. The study findings showed that the novel algorithm is more accurate, reliable, and repeatable than manual SD-OCT analysis. The adaptability of the algorithm makes it potentially suitable for analyzing SD-OCT scans of other non-mammalian species.

光谱域光学相干断层扫描(SD-OCT)已成为活体受试者眼部组织评估和开展眼部发育、健康和疾病研究的重要工具。由于缺乏自动化分析程序,SD-OCT图像的处理,特别是那些来自非哺乳动物物种的图像,是一个劳动密集型的人工过程。本文描述了一种新的计算机算法的开发和实现,用于对活体硬骨鱼眼睛的SD-OCT图像进行定量分析。提出了一种基于阈值分割的SD-OCT视网膜层图像自动分割处理方法。该算法可以在短时间内测量出硬骨鱼眼部结构的大量成像数据中的视网膜厚度特征,与人工测量相比,提高了SD-OCT图像分析的准确性和可重复性。该算法还为给定数据集的大量图像生成数百个视网膜厚度测量值。同时,还创建了将SD-OCT图像测量结果绘制为颜色梯度的热成像软件。该软件直接转换每个处理图像的测量值,以表示整个视网膜扫描的厚度变化。它还可以通过扫描实现视网膜厚度的2D和3D可视化,促进标本比较和感兴趣区域的定位。研究结果表明,新算法比人工SD-OCT分析更准确、可靠和可重复。该算法的适应性使其可能适用于分析其他非哺乳动物物种的SD-OCT扫描。
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引用次数: 0
Chronic ocular sequelae in Stevens-Johnson syndrome: a genetic association study. 史蒂文斯-约翰逊综合征的慢性眼部后遗症:一项遗传关联研究。
IF 2.2 3区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01
Sushil K Sangwan, Namrata Sharma, Tushar Agarwal, Neena Khanna, Ravindra M Pandey, Arundhati Sharma, Rasik B Vajpayee

Purpose: This study sought to investigate the association of molecular markers with chronic ocular sequelae in Stevens-Johnson syndrome/toxic epidermal necrolysis (SJS/TEN).

Methods: One hundred SJS/TEN patients (200 eyes) with confirmed diagnosis were enrolled between July 2011 and July 2015 from a tertiary eye-care hospital, and their clinical histories were noted. Each eye was scored for severity of manifestation on a scale of 0-5. Peripheral blood samples were collected for DNA followed by screening for interleukin (IL-4, IL-13, IL-4R) polymorphisms, HLA-A locus allele typing, and sera to detect levels of the apoptotic markers granulysin and sFas L.

Results: Of the 100 enrolled patients (53 males/47 females; age range: 6-58 years), the incriminating drugs were non-steroidal anti-inflammatory (52%), antibiotics (10%), sulphonamides (8%), anti-epileptics (6%), and unknown (24%). Significant differences in the frequencies of IL-4R polymorphism, HLA-A*3301, HLA-A*02, and HLA-A*2402 alleles, and elevated levels of granulysin and sFas L were observed in patients compared to controls. The ocular complications of conjunctival keratinization (p=0.004) showed an association with IL-13 promoter region (IL-13a) genotypes.

Conclusions: The study highlights the possible association of interleukin-13 with severity-graded chronic sequelae and the role of HLA-A alleles- HLA-A*3301, HLA-A*02, and HLA-A*2402 in SJS/TEN causation and manifestation. Screening of these alleles may help caregivers to identify markers associated with severe and lifelong ocular complications, and help in appropriate treatment and management of the condition.

目的:探讨分子标志物与Stevens-Johnson综合征/中毒性表皮坏死松解(SJS/TEN)慢性眼部后遗症的关系。方法:选取2011年7月至2015年7月在某三级眼科医院确诊的SJS/TEN患者100例(200眼),记录其临床病史。每只眼睛的症状严重程度评分为0-5分。采集外周血样本进行DNA检测,筛选白细胞介素(IL-4、IL-13、IL-4R)多态性、HLA-A位点等位基因分型,并检测血清中凋亡标志物颗粒素和sFas l水平。年龄范围:6-58岁),相关药物为非甾体类抗炎药(52%)、抗生素(10%)、磺胺类药物(8%)、抗癫痫药(6%)和未知药物(24%)。与对照组相比,患者IL-4R多态性、HLA-A*3301、HLA-A*02和HLA-A*2402等位基因频率以及颗粒蛋白和sFas L水平升高均存在显著差异。结膜角化的眼部并发症与IL-13启动子区(IL-13a)基因型相关(p=0.004)。结论:本研究强调了白细胞介素-13与严重程度慢性后遗症的可能关联,以及HLA-A等位基因HLA-A*3301、HLA-A*02、HLA-A*2402在SJS/TEN病因和表现中的作用。筛查这些等位基因可以帮助护理人员识别与严重和终身眼部并发症相关的标记,并有助于适当的治疗和管理。
{"title":"Chronic ocular sequelae in Stevens-Johnson syndrome: a genetic association study.","authors":"Sushil K Sangwan,&nbsp;Namrata Sharma,&nbsp;Tushar Agarwal,&nbsp;Neena Khanna,&nbsp;Ravindra M Pandey,&nbsp;Arundhati Sharma,&nbsp;Rasik B Vajpayee","doi":"","DOIUrl":"","url":null,"abstract":"<p><strong>Purpose: </strong>This study sought to investigate the association of molecular markers with chronic ocular sequelae in Stevens-Johnson syndrome/toxic epidermal necrolysis (SJS/TEN).</p><p><strong>Methods: </strong>One hundred SJS/TEN patients (200 eyes) with confirmed diagnosis were enrolled between July 2011 and July 2015 from a tertiary eye-care hospital, and their clinical histories were noted. Each eye was scored for severity of manifestation on a scale of 0-5. Peripheral blood samples were collected for DNA followed by screening for interleukin (IL-4, IL-13, IL-4R) polymorphisms, HLA-A locus allele typing, and sera to detect levels of the apoptotic markers granulysin and sFas L.</p><p><strong>Results: </strong>Of the 100 enrolled patients (53 males/47 females; age range: 6-58 years), the incriminating drugs were non-steroidal anti-inflammatory (52%), antibiotics (10%), sulphonamides (8%), anti-epileptics (6%), and unknown (24%). Significant differences in the frequencies of IL-4R polymorphism, HLA-A*3301, HLA-A*02, and HLA-A*2402 alleles, and elevated levels of granulysin and sFas L were observed in patients compared to controls. The ocular complications of conjunctival keratinization (p=0.004) showed an association with IL-13 promoter region (IL-13a) genotypes.</p><p><strong>Conclusions: </strong>The study highlights the possible association of interleukin-13 with severity-graded chronic sequelae and the role of HLA-A alleles- HLA-A*3301, HLA-A*02, and HLA-A*2402 in SJS/TEN causation and manifestation. Screening of these alleles may help caregivers to identify markers associated with severe and lifelong ocular complications, and help in appropriate treatment and management of the condition.</p>","PeriodicalId":18866,"journal":{"name":"Molecular Vision","volume":"28 ","pages":"526-535"},"PeriodicalIF":2.2,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/09/86/mv-v28-526.PMC10115362.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9380333","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Efficacy of sodium polyanethol sulfonate on herpes simplex virus-1 infection in vitro. 聚茴香醇磺酸钠体外治疗单纯疱疹病毒1型感染的疗效观察。
IF 2.2 3区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01
Jingwei Li, Chao Cheng, Tianlan Lin, Ran Xue, Xiuping Liu, Kaili Wu

Objective: To investigate the effect of sodium polyanethol sulfonate (SPS) on herpes simplex virus type 1 (HSV-1) infection in vitro.

Methods: Human corneal epithelial (HCE-T) cells and Vero cells were infected with HSV-1 [HSV-1 f strain, HSV-1f; HSV-1-H129 with green fluorescent protein (GFP) knock-in, HSV-1g]. SPS was added to the culture medium at various concentrations in time-of-addition assay. Experiments including photography of fluorescence in HSV-1g or plaque formation by HSV-1f, western blot assays, real-time RT-PCR assays, cytopathic effect inhibition assays, cytotoxicity assays, and viral absorption and penetration assays were performed to explore the antiviral effect and mechanism of the compounds.

Results: We identified that SPS reduced the replication of HSV-1 in HCE-T and Vero cells in a dose-dependent manner. HSV-1g fluorescence was reduced by 66.3% and 65.4% in HCE-T and Vero cells, respectively, after treatment with 0.4 µg/ml SPS. Furthermore, the viral fluorescence intensities were inhibited by SPS in a dose-dependent manner when the viruses or cells were preincubated with SPS. Relative levels of the ICP4 protein and VP16 mRNA were decreased by SPS in a dose-dependent manner. Moreover, the IC50 values of SPS for HSV-1g and HSV-1f in HCE-T cells were 0.69±0.09 μg/ml and 1.63±0.44 μg/ml, respectively. Even 10,000 µg/ml SPS had no obvious cytotoxicity toward HCE-T and Vero cells. Importantly, viral absorption and penetration assays showed that the relative fluorescence intensity of HSV-1g was significantly reduced by SPS in a dose-dependent manner in the absorption test, but no change was observed in the penetration test.

Conclusions: SPS inhibits HSV-1 replication in HCE-T and Vero cells, indicating that SPS has the potential for treating HSV-1 infection, particularly HSV-1 keratitis.

目的:探讨聚茴香醇磺酸钠(SPS)对体外单纯疱疹病毒1型(HSV-1)感染的影响。方法:人角膜上皮细胞(HCE-T)和Vero细胞感染HSV-1 [HSV-1 f株,HSV-1f;带有绿色荧光蛋白(GFP)敲入的HSV-1-H129 [HSV-1g]。在培养基中加入不同浓度的SPS,进行添加时间测定。通过对HSV-1g或HSV-1f形成斑块的荧光摄影、western blot、实时RT-PCR、细胞病变效应抑制、细胞毒性、病毒吸收渗透等实验,探讨化合物的抗病毒作用及机制。结果:我们发现SPS在HCE-T和Vero细胞中以剂量依赖的方式减少HSV-1的复制。0.4µg/ml SPS处理后,HCE-T和Vero细胞的HSV-1g荧光分别降低66.3%和65.4%。此外,当病毒或细胞与SPS预孵育时,SPS以剂量依赖的方式抑制病毒荧光强度。SPS以剂量依赖的方式降低ICP4蛋白和VP16 mRNA的相对水平。SPS对HSV-1g和HSV-1f在HCE-T细胞中的IC50值分别为0.69±0.09 μg和1.63±0.44 μg/ml。即使10,000 μ g/ml SPS对HCE-T和Vero细胞也没有明显的细胞毒性。重要的是,病毒吸收和渗透实验表明,在吸收试验中,SPS显著降低了HSV-1g的相对荧光强度,呈剂量依赖性,但在渗透试验中没有观察到变化。结论:SPS抑制HSV-1在HCE-T和Vero细胞中的复制,表明SPS具有治疗HSV-1感染,特别是HSV-1角膜炎的潜力。
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引用次数: 0
In vitro induction and intraocular application in oxygen-induced retinopathy of adipose-derived mesenchymal stem cells. 氧诱导脂肪源性间充质干细胞视网膜病变的体外诱导及眼内应用。
IF 2.2 3区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01
Lvlv Zhou, Haifeng Zhang, Sarina Wu, Yuhong He, Kai Guo

Purpose: We designed a study to find theoretical evidence for the induction, movement, fusion, proliferation, and safety of human adipose mesenchymal stem cells (hADSCs) in intraocular application.

Methods: HADSCs were induced to confirm that they can express the characteristics of endothelial cells (ECs) in vitro. HADSCs were intraocularly injected into oxygen-induced retinopathy (OIR) mice to check the movement, fusion, proliferation, and prognosis in vivo. Electron microscopy was used to check retinal changes to confirm the safety of hADSCs in intraocular application.

Results: After induction, hADSCs expressed von Willebrand Factor (vWF), the cell marker of ECs. The hADSCs were distributed above the retina after an intravitreal injection in the OIR mice. The injected cells did not fuse with the retina and gathered in the central and peripheral areas, which is the lesion area of the OIR model. Five days after the hADSC intravitreal injection, the area of ​neovascularization was reduced by 94.83% compared with that of the OIR group. Hematologic staining and electron microscopy did not show noticeable proliferation and degeneration of the retina.

Conclusions: This study provides evidence for the intraocular application of hADSCs.

目的:我们设计了一项研究,旨在寻找人脂肪间充质干细胞(hADSCs)在眼内应用中的诱导、运动、融合、增殖和安全性的理论证据。方法:体外诱导hascs表达内皮细胞(ECs)特征。将HADSCs眼内注射到氧致视网膜病变(OIR)小鼠体内,观察其在体内的运动、融合、增殖和预后。电镜检查视网膜变化,确认hscs眼内应用的安全性。结果:诱导后,hscs表达内皮细胞标志物血管性血液病因子(vWF)。在OIR小鼠玻璃体内注射后,hascs分布在视网膜上方。注射的细胞没有与视网膜融合,聚集在中央和外周区域,这是OIR模型的病变区域。玻璃体内注射hADSC 5 d后,新生血管面积较OIR组减少94.83%。血液学染色和电镜未见明显的视网膜增生和变性。结论:本研究为hscs的眼内应用提供了依据。
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引用次数: 0
Neural differentiation of human retinal pigment epithelial cells on alginate/gelatin substrate. 海藻酸盐/明胶基质上人视网膜色素上皮细胞的神经分化。
IF 2.2 3区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01
Hoda Shamsnajafabadi, Zahra-Soheila Soheili, Shahram Samiee, Hamid Ahmadieh, Ehsan Ranaei Pirmardan, Massoud Haghighi

Purpose: The development of biomaterials provides potent promise for the regeneration of neuroretinal cells in degenerative eye diseases and retinal tissue engineering. Biomimetic three-dimensional (3D) microenvironments and specific growth factors motivate the differentiation of human retinal pigment epithelial (hRPE) cells toward a retinal neural lineage. In this study, we evaluated alginate/gelatin (A/G) as a substrate for the culture of hRPE cells.

Methods: hRPE cells were isolated from neonatal human cadaver globes and cultivated on A/G substrate under different culture conditions, including 30% human amniotic fluid (HAF), 10% fetal bovine serum (FBS), and serum-free Dulbecco's modified Eagle's medium/nutrient mixture F-12 (DMEM/F12). The proliferation of cells in different culture conditions was determined using 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide and a cell proliferation assay. Immunocytochemistry and real-time PCR were performed to evaluate the effect of the substrate on hRPE cell differentiation.

Results: A significant increase in the cell proliferation rate was observed in hRPE cells cultivated on an A/G substrate. Continuous observations demonstrated that hRPE cells formed densely packed, suspended spheroids in DMEM/F12 culture conditions, with dominant transdifferentiation into amacrine cells. Small adherent clusters of hRPE cells in HAF- and FBS-treated cultures represented dedifferentiation toward retinal progenitor cells. These cultures generated amacrine, rod photoreceptors, and bipolar cells.

Conclusions: These findings indicated that A/G substrate induced neural retinal cell propagation in cultures and would therefore be promising for RPE-based tissue engineering studies.

目的:生物材料的发展为退行性眼病神经视网膜细胞的再生和视网膜组织工程提供了广阔的前景。仿生三维(3D)微环境和特定生长因子激发人视网膜色素上皮(hRPE)细胞向视网膜神经谱系分化。在这项研究中,我们评估了海藻酸盐/明胶(A/G)作为培养hRPE细胞的底物。方法:从新生儿人尸球中分离hRPE细胞,在A/G底物上分别培养30%人羊水(HAF)、10%胎牛血清(FBS)和无血清Dulbecco改良Eagle培养基/营养混合物F-12 (DMEM/F12)。采用3-(4,5-二甲基噻唑-2-基)-2,5-二苯基溴化四唑和细胞增殖试验测定细胞在不同培养条件下的增殖情况。免疫细胞化学和实时荧光定量PCR检测底物对hRPE细胞分化的影响。结果:A/G底物培养的hRPE细胞增殖率明显提高。连续观察表明,在DMEM/F12培养条件下,hRPE细胞形成密集的悬浮球体,主要转分化为无毛细胞。在HAF和fbs处理的培养物中,hRPE细胞的小贴壁簇表示向视网膜祖细胞去分化。这些培养产生无分泌细胞、杆状光感受器和双极细胞。结论:这些发现表明A/G底物可诱导培养的神经视网膜细胞增殖,因此在基于rpe的组织工程研究中具有前景。
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引用次数: 0
Association of IGF1 polymorphisms with exotropia in a Pakistani cohort. 巴基斯坦人群中IGF1多态性与外斜视的关系
IF 2.2 3区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01
Zainab Zehra, Netasha Khan, Minhal Nadeem, Sorath Noorani Siddiqui, Christopher S von Bartheld, Maleeha Azam, Raheel Qamar

Purpose: Strabismus (STBMS) is a multifactorial ocular disorder in children that leads to misalignment of the eyes. Insulin-like growth factor 1 (IGF1) has been shown to be involved in the development of extraocular muscles and myopia; however, data are limited on the genetic associations of IGF1 with STBMS in Pakistan.

Methods: Two hundred seventy-four STBMS cases and 272 unaffected controls were recruited, and their DNA was extracted. Two IGF1 single nucleotide polymorphisms, rs6214 and rs5742632, were genotyped using PCR-restriction fragment length polymorphism. Univariate logistic regression analysis was performed to determine the association of these single nucleotide polymorphisms with STBMS, and the results were adjusted for age and sex. In addition, 26 extraocular muscle tissues were collected from patients with STBMS undergoing squint correction surgery, along with 3 deceased control samples. IGF1 mRNA expression was measured by quantitative PCR; the Mann-Whitney U test was applied, and fold change was calculated. Logistic regression analysis was applied to determine the association of RNA expression and fold change with genotype.

Results: Multivariate logistic regression analysis revealed that rs5742632 (odds ratio [95% confidence interval] = 1.05[1.01-1.06], p = 0.03) is associated with STBM. Moreover, rs6214 (1.03[1.01-1.05], p = 0.03) and rs5742632 (1.09[1.04-1.11], p = 0.04) were associated with exotropia. Statistically, no significant difference in IGF1 mRNA expression in the extraocular muscles between the STBMS cases and the controls was observed.

Conclusions: IGF1 polymorphisms rs5742632 (A>G) and rs6214 (C>T) are plausible risk factors for the development of exotropia. However, the physiologic mechanism requires further evaluation.

目的:斜视(STBMS)是一种多因素的儿童眼部疾病,导致眼睛错位。胰岛素样生长因子1 (IGF1)已被证明参与眼外肌和近视的发育;然而,关于IGF1与巴基斯坦STBMS的遗传关联的数据有限。方法:收集STBMS患者274例,对照组272例,提取DNA。利用pcr -限制性片段长度多态性对2个IGF1单核苷酸多态性rs6214和rs5742632进行基因分型。进行单因素logistic回归分析,以确定这些单核苷酸多态性与STBMS的关系,并根据年龄和性别对结果进行调整。此外,从接受斜视矫正手术的STBMS患者收集了26个眼外肌组织,并收集了3个已故对照样本。定量PCR检测IGF1 mRNA表达;采用Mann-Whitney U检验,计算折叠变化。采用Logistic回归分析确定RNA表达和折叠变化与基因型的关系。结果:多因素logistic回归分析显示,rs5742632(优势比[95%置信区间]= 1.05[1.01-1.06],p = 0.03)与STBM相关。rs6214 (1.03[1.01-1.05], p = 0.03)和rss5742632 (1.09[1.04-1.11], p = 0.04)与外斜视相关。统计学上,STBMS患者眼外肌IGF1 mRNA表达与对照组无显著差异。结论:IGF1基因多态性rss5742632 (A>G)和rs6214 (C>T)可能是外斜视发生的危险因素。但其生理机制有待进一步研究。
{"title":"Association of <i>IGF1</i> polymorphisms with exotropia in a Pakistani cohort.","authors":"Zainab Zehra,&nbsp;Netasha Khan,&nbsp;Minhal Nadeem,&nbsp;Sorath Noorani Siddiqui,&nbsp;Christopher S von Bartheld,&nbsp;Maleeha Azam,&nbsp;Raheel Qamar","doi":"","DOIUrl":"","url":null,"abstract":"<p><strong>Purpose: </strong>Strabismus (STBMS) is a multifactorial ocular disorder in children that leads to misalignment of the eyes. Insulin-like growth factor 1 (<i>IGF1</i>) has been shown to be involved in the development of extraocular muscles and myopia; however, data are limited on the genetic associations of <i>IGF1</i> with STBMS in Pakistan.</p><p><strong>Methods: </strong>Two hundred seventy-four STBMS cases and 272 unaffected controls were recruited, and their DNA was extracted. Two <i>IGF1</i> single nucleotide polymorphisms, rs6214 and rs5742632, were genotyped using PCR-restriction fragment length polymorphism. Univariate logistic regression analysis was performed to determine the association of these single nucleotide polymorphisms with STBMS, and the results were adjusted for age and sex. In addition, 26 extraocular muscle tissues were collected from patients with STBMS undergoing squint correction surgery, along with 3 deceased control samples. <i>IGF1</i> mRNA expression was measured by quantitative PCR; the Mann-Whitney U test was applied, and fold change was calculated. Logistic regression analysis was applied to determine the association of RNA expression and fold change with genotype.</p><p><strong>Results: </strong>Multivariate logistic regression analysis revealed that rs5742632 (odds ratio [95% confidence interval] = 1.05[1.01-1.06], p = 0.03) is associated with STBM. Moreover, rs6214 (1.03[1.01-1.05], p = 0.03) and rs5742632 (1.09[1.04-1.11], p = 0.04) were associated with exotropia. Statistically, no significant difference in <i>IGF1</i> mRNA expression in the extraocular muscles between the STBMS cases and the controls was observed.</p><p><strong>Conclusions: </strong><i>IGF1</i> polymorphisms rs5742632 (A>G) and rs6214 (C>T) are plausible risk factors for the development of exotropia. However, the physiologic mechanism requires further evaluation.</p>","PeriodicalId":18866,"journal":{"name":"Molecular Vision","volume":"28 ","pages":"369-377"},"PeriodicalIF":2.2,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/0e/22/mv-v28-369.PMC9603902.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10404762","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
αA and αB peptides from human cataractous lenses show antichaperone activity and enhance aggregation of lens proteins. 人白内障晶状体αA和αB肽具有抗伴侣蛋白活性,能促进晶状体蛋白的聚集。
IF 2.2 3区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01
Om Srivastava, Landon Wilson, Stephen Barnes, Kiran Srivastava, Roy Joseph

Purpose: To identify and characterize properties of αA- and αB-crystallins' low molecular weight peptides (molecular weight [Mr] < 5 kDa) that were present in a 62-year-old human nuclear cataract, but not in normal 62-year-old human lenses.

Methods: Low molecular weight peptides (< 5 kDa) were isolated with a trichloroacetic acid (TCA) solubilization method from water-soluble (WS) and water-insoluble (WI) proteins of nuclear cataractous lenses of a 62-year-old donor and normal human lenses from an age-matched donor. Five commercially synthesized peptides (found only in cataractous lenses and not in normal lenses) were used to determine their chaperone and antichaperone activity and aggregation properties.

Results: Mass spectrometric analysis showed 28 peptides of αA-crystallin and 38 peptides of αB-crystallin were present in the cataractous lenses but not in the normal lenses. Two αA peptides (named αAP1 and αAP2; both derived from the αA N-terminal domain (NTD) region) and three αB peptides (named αBP3, αBP4, and αBP5, derived from the αB NTD-, core domain (CD), and C-terminal extension (CTE) regions, respectively) were commercially synthesized. αAP1 inhibited the chaperone activity of αA- and αB-crystallins, but the other four peptides (αAP2, αBP3, αBP4, and αBP5) exhibited mixed effects on chaperone activity. Upon incubation with human WS proteins and peptides in vitro, the αBP4 peptide showed higher aggregation properties relative to the αAP1 peptide. During in vivo experiments, the cell-penetrating polyarginine-labeled αAP1 and αBP4 peptides showed 57% and 85% aggregates, respectively, around the nuclei of cultured human lens epithelial cells compared to only 35% by a scrambled peptide.

Conclusions: The antichaperone activity of the αAP1 peptide and the aggregation property of the αBP4 peptide with lens proteins could play a potential role during the development of lens opacity.

目的:鉴定和表征62岁人类核性白内障中存在的αA-和α b晶体蛋白低分子量肽(分子量[Mr] < 5 kDa)的性质,而正常62岁人类晶状体中不存在αA-和α b晶体蛋白。方法:采用三氯乙酸(TCA)增溶法从62岁供体白内障晶状体的水溶性(WS)和不水溶性(WI)蛋白和年龄匹配供体的正常人晶状体中分离出低分子量肽(< 5 kDa)。五种商业合成的多肽(仅存在于白内障晶状体中而不存在于正常晶状体中)被用来测定它们的伴侣和反伴侣活性和聚集特性。结果:质谱分析显示,白内障晶状体中存在α a -晶体蛋白28个肽段和α b -晶体蛋白38个肽段,正常晶状体中不存在α a -晶体蛋白。两个αA肽(命名为αAP1和αAP2);αA的n端结构域(NTD)和αB的3个肽类(αBP3、αBP4和αBP5,分别来源于αB的NTD-、核心结构域(CD)和c端延伸区(CTE))已被商业化合成。αAP1抑制αA-和α b -晶体蛋白的伴侣蛋白活性,而αAP2、αBP3、αBP4和αBP5对伴侣蛋白活性的影响是混合的。与人WS蛋白和肽体外孵育后,αBP4肽相对于αAP1肽表现出更高的聚集特性。在体内实验中,聚精氨酸标记的αAP1和αBP4肽在体外培养的人晶状体上皮细胞的细胞核周围分别聚集了57%和85%,而聚精氨酸标记的αAP1和αBP4肽的聚集率仅为35%。结论:αAP1肽的抗伴侣活性和αBP4肽与晶状体蛋白的聚集特性可能在晶状体混浊的发生过程中起潜在作用。
{"title":"αA and αB peptides from human cataractous lenses show antichaperone activity and enhance aggregation of lens proteins.","authors":"Om Srivastava,&nbsp;Landon Wilson,&nbsp;Stephen Barnes,&nbsp;Kiran Srivastava,&nbsp;Roy Joseph","doi":"","DOIUrl":"","url":null,"abstract":"<p><strong>Purpose: </strong>To identify and characterize properties of αA- and αB-crystallins' low molecular weight peptides (molecular weight [Mr] < 5 kDa) that were present in a 62-year-old human nuclear cataract, but not in normal 62-year-old human lenses.</p><p><strong>Methods: </strong>Low molecular weight peptides (< 5 kDa) were isolated with a trichloroacetic acid (TCA) solubilization method from water-soluble (WS) and water-insoluble (WI) proteins of nuclear cataractous lenses of a 62-year-old donor and normal human lenses from an age-matched donor. Five commercially synthesized peptides (found only in cataractous lenses and not in normal lenses) were used to determine their chaperone and antichaperone activity and aggregation properties.</p><p><strong>Results: </strong>Mass spectrometric analysis showed 28 peptides of αA-crystallin and 38 peptides of αB-crystallin were present in the cataractous lenses but not in the normal lenses. Two αA peptides (named αAP1 and αAP2; both derived from the αA N-terminal domain (NTD) region) and three αB peptides (named αBP3, αBP4, and αBP5, derived from the αB NTD-, core domain (CD), and C-terminal extension (CTE) regions, respectively) were commercially synthesized. αAP1 inhibited the chaperone activity of αA- and αB-crystallins, but the other four peptides (αAP2, αBP3, αBP4, and αBP5) exhibited mixed effects on chaperone activity. Upon incubation with human WS proteins and peptides in vitro, the αBP4 peptide showed higher aggregation properties relative to the αAP1 peptide. During in vivo experiments, the cell-penetrating polyarginine-labeled αAP1 and αBP4 peptides showed 57% and 85% aggregates, respectively, around the nuclei of cultured human lens epithelial cells compared to only 35% by a scrambled peptide.</p><p><strong>Conclusions: </strong>The antichaperone activity of the αAP1 peptide and the aggregation property of the αBP4 peptide with lens proteins could play a potential role during the development of lens opacity.</p>","PeriodicalId":18866,"journal":{"name":"Molecular Vision","volume":"28 ","pages":"147-164"},"PeriodicalIF":2.2,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/f2/a2/mv-v28-147.PMC9744240.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10687324","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetic and environmental risk factors for reticular pseudodrusen in the EUGENDA study. EUGENDA研究中网状假蝇的遗传和环境危险因素。
IF 2.2 3区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2021-12-31 eCollection Date: 2021-01-01
Lebriz Altay, Sandra Liakopoulos, Aileen Berghold, Kerstin-Daniela Rosenberger, Angela Ernst, Anita de Breuk, Anneke I den Hollander, Sascha Fauser, Tina Schick

Purpose: The purpose of this study was to analyze genetic and nongenetic associations with reticular pseudodrusen (RPD) in patients with and without age-related macular degeneration (AMD).

Methods: This case-control study included 2,719 consecutive subjects from the prospective multicenter European Genetic Database (EUGENDA). Color fundus photographs and optical coherence tomography (OCT) scans were evaluated for the presence of AMD and RPD. Association of RPD with 39 known AMD polymorphisms and various nongenetic risk factors was evaluated. Stepwise backward variable selection via generalized linear models (GLMs) was performed based on models including the following: a) age, sex, and genetic factors and b) all predictors. Receiver operating characteristic (ROC) curves and the areas under the curve (AUCs) were determined.

Results: RPD were present in 262 cases (no AMD, n = 9 [0.7%; early/intermediate AMD, n = 75 [12.4%]; late AMD, n = 178 [23.8%]). ROC analysis of the genetic model including age, APOE rs2075650, ARMS2 rs10490924, CFH rs800292, CFH rs12144939, CFI rs10033900, COL8A1 rs13081855, COL10A1 rs3812111, GLI3 rs2049622, and SKIV2L rs4296082 revealed an AUC of 0.871. Considering all possible predictors, backward selection revealed a slightly different set of genetic factors, as well as the following nongenetic risk factors: smoking, rheumatoid arthritis, steroids, antiglaucomatous drugs, and past sunlight exposure; the results showed an AUC of 0.886.

Conclusions: RPD share a variety of genetic and nongenetic risk factors with AMD. Future AMD grading systems should integrate RPD as an important risk phenotype.

目的:本研究的目的是分析患有和不患有年龄相关性黄斑变性(AMD)的网状假性黄斑变性(RPD)患者的遗传和非遗传相关性。方法:本病例对照研究纳入前瞻性多中心欧洲遗传数据库(EUGENDA)的2,719例连续受试者。彩色眼底照片和光学相干断层扫描(OCT)评估AMD和RPD的存在。评估了RPD与39种已知AMD多态性和各种非遗传危险因素的关系。通过广义线性模型(GLMs)进行逐步后向变量选择,基于以下模型:a)年龄、性别和遗传因素;b)所有预测因子。测定受试者工作特征曲线(ROC)和曲线下面积(auc)。结果:RPD 262例(无AMD, n = 9 [0.7%];早期/中期AMD, n = 75 [12.4%];晚期AMD, n = 178[23.8%])。对年龄、APOE rs2075650、ARMS2 rs10490924、CFH rs800292、CFH rs12144939、CFI rs10033900、COL8A1 rs13081855、COL10A1 rs3812111、GLI3 rs2049622、SKIV2L rs4296082等遗传模型进行ROC分析,AUC为0.871。考虑到所有可能的预测因素,逆向选择揭示了一组略有不同的遗传因素,以及以下非遗传风险因素:吸烟、类风湿关节炎、类固醇、抗青光眼药物和过去的阳光照射;结果表明,AUC为0.886。结论:RPD与AMD具有多种遗传和非遗传危险因素。未来的AMD分级系统应该将RPD作为一个重要的风险表型。
{"title":"Genetic and environmental risk factors for reticular pseudodrusen in the EUGENDA study.","authors":"Lebriz Altay,&nbsp;Sandra Liakopoulos,&nbsp;Aileen Berghold,&nbsp;Kerstin-Daniela Rosenberger,&nbsp;Angela Ernst,&nbsp;Anita de Breuk,&nbsp;Anneke I den Hollander,&nbsp;Sascha Fauser,&nbsp;Tina Schick","doi":"","DOIUrl":"","url":null,"abstract":"<p><strong>Purpose: </strong>The purpose of this study was to analyze genetic and nongenetic associations with reticular pseudodrusen (RPD) in patients with and without age-related macular degeneration (AMD).</p><p><strong>Methods: </strong>This case-control study included 2,719 consecutive subjects from the prospective multicenter European Genetic Database (EUGENDA). Color fundus photographs and optical coherence tomography (OCT) scans were evaluated for the presence of AMD and RPD. Association of RPD with 39 known AMD polymorphisms and various nongenetic risk factors was evaluated. Stepwise backward variable selection via generalized linear models (GLMs) was performed based on models including the following: a) age, sex, and genetic factors and b) all predictors. Receiver operating characteristic (ROC) curves and the areas under the curve (AUCs) were determined.</p><p><strong>Results: </strong>RPD were present in 262 cases (no AMD, n = 9 [0.7%; early/intermediate AMD, n = 75 [12.4%]; late AMD, n = 178 [23.8%]). ROC analysis of the genetic model including age, <i>APOE</i> rs2075650, <i>ARMS2</i> rs10490924, <i>CFH</i> rs800292, <i>CFH</i> rs12144939, <i>CFI</i> rs10033900, <i>COL8A1</i> rs13081855, <i>COL10A1</i> rs3812111, <i>GLI3</i> rs2049622, and <i>SKIV2L</i> rs4296082 revealed an AUC of 0.871. Considering all possible predictors, backward selection revealed a slightly different set of genetic factors, as well as the following nongenetic risk factors: smoking, rheumatoid arthritis, steroids, antiglaucomatous drugs, and past sunlight exposure; the results showed an AUC of 0.886.</p><p><strong>Conclusions: </strong>RPD share a variety of genetic and nongenetic risk factors with AMD. Future AMD grading systems should integrate RPD as an important risk phenotype.</p>","PeriodicalId":18866,"journal":{"name":"Molecular Vision","volume":"27 ","pages":"757-767"},"PeriodicalIF":2.2,"publicationDate":"2021-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/f7/27/mv-v27-757.PMC8763662.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39605485","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Molecular Vision
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