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Carbonate anions and radicals induce interfacial water ordering in CO2 electroreduction on gold 碳酸盐阴离子和自由基诱导CO2电还原金的界面水有序
IF 21.8 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-11-25 DOI: 10.1038/s41557-025-01977-8
Ya-Wei Zhou, Enric Ibáñez-Alé, Núria López, Beatriz Roldan Cuenya, Christopher S. Kley
Interfacial hydration layers critically determine energy and chemical conversion processes, notably influencing the kinetics of electrocatalytic reactions. Fundamental mechanisms of reactions such as CO 2 electroreduction and hydrogen evolution remain controversial due to the challenge of in situ deciphering of hydration structures alongside reaction intermediates and products. Here, by using vibrational and electrochemical spectroscopy paired with theory we reveal how carbonates structure interfacial water, affecting CO 2 electroreduction and hydrogen evolution reactions on gold electrocatalysts in bicarbonate electrolytes. High cathodic potentials accelerate hydrogen evolution reactions by rapid proton delivery from ordered interfacial hydration networks, induced by carbonate molecules in equilibrium with their anion radicals. These radicals can serve, in addition to CO 2 , as a carbon source for CO and aldehyde production. Moreover we show water to be the primary proton donor for CO 2 electroreduction and hydrogen evolution reactions, with bicarbonate mostly participating in the Heyrovsky step. Our molecular-level insights are relevant to rationalizing and optimizing electrochemical interfaces.
界面水化层决定着能量和化学转化过程,尤其影响电催化反应的动力学。二氧化碳电还原和析氢等反应的基本机制仍然存在争议,这是由于对反应中间体和产物水合结构的原位破译所面临的挑战。本文通过振动和电化学光谱结合理论,揭示了碳酸盐与界面水的结构关系,影响了碳酸氢盐电解质中金电催化剂上CO 2电还原和析氢反应。高阴极电位通过有序界面水化网络的快速质子传递来加速析氢反应,这是由碳酸盐分子与其阴离子自由基平衡引起的。除了CO 2,这些自由基还可以作为CO和醛生产的碳源。此外,我们发现水是CO 2电还原和析氢反应的主要质子供体,碳酸氢盐主要参与Heyrovsky步骤。我们的分子水平的见解是相关的合理化和优化电化学界面。
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引用次数: 0
Heterogeneous polymer designs that bring electricity, light and substrates together 多相聚合物设计将电、光和基材结合在一起
IF 20.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-11-24 DOI: 10.1038/s41557-025-02005-5
D. I. Ioannou, J. N. H. Reek
Electrophotocatalysis offers a promising strategy for relatively inert molecules, but designing robust systems has been challenging. Now, heterogeneous polymers, composed of perylenediimide units with flexible linkers, unlock chloroarene reduction and functionalization through closed-shell dianion generation and substrate precomplexation.
光电催化为相对惰性分子提供了一种很有前途的策略,但设计强大的系统一直具有挑战性。现在,由具有柔性连接剂的过二亚胺单元组成的非均相聚合物通过封闭壳离子生成和底物预络合来解锁氯芳烃的还原和功能化。
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引用次数: 0
An isolable germa-isonitrile featuring a terminal nitrogen–germanium triple bond 一种具有末端氮锗三键的可分离的锗异腈
IF 20.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-11-24 DOI: 10.1038/s41557-025-01997-4
Zixu Wang, Chengxiang Ding, Yizhen Chen, Mengdi Huang, Dongmin Wang, Lei Xu, Sudip Pan, Shengfa Ye, Gengwen Tan
Isonitriles (R–N≡C), first discovered by Lieke in 1859, are well-established functional molecules in organic and organometallic chemistry. By contrast, the synthesis and investigation of tetrela-isonitriles (R–N≡E, E = Si, Ge, Sn or Pb), their heavier group 14 analogues, remain challenging due to their high reactivity. The characterization of such species has largely relied on spectroscopic data collected at cryogenic temperatures or under gas-phase conditions. Here we report the synthesis and characterization of a germa-isonitrile (Ar–N≡Ge) stabilized by a bulky aryl ligand. This compound, which features a terminal N≡Ge triple bond with a Ge‒N bond length of 1.6395(19) Å, has been characterized through X-ray crystallographic, solid-state ¹⁵N nuclear magnetic resonance spectroscopic and computational studies. The highly polarized N≡Ge moiety exhibits versatile reactivity towards organic substrates and transition metal precursors, underscoring its potential use in synthetic chemistry. The study of tetrela-isonitriles—the heavier group 14 analogues of isonitriles—has largely relied on the investigation of transient species under matrix isolation or gas-phase conditions. Now a germa-isonitrile featuring a terminal N≡Ge triple bond and a pseudo-monocoordinate germanium atom has been isolated in the condensed phase. Its reactivity towards selected organic substrates and transition metal complexes has also been explored.
异腈(R-N≡C)于1859年由李克首次发现,是有机和有机金属化学中公认的功能分子。相比之下,四元异腈(R-N≡E, E = Si, Ge, Sn或Pb)的合成和研究,它们较重的14族类似物,由于其高反应性仍然具有挑战性。这类物质的表征很大程度上依赖于在低温或气相条件下收集的光谱数据。在这里,我们报道了一种由庞大的芳基配体稳定的锗异腈(Ar-N≡Ge)的合成和表征。该化合物以端N≡Ge三键为特征,Ge - N键长为1.6395(19)Å,已通过x射线晶体学、固态¹5 N核磁共振光谱和计算研究对其进行了表征。高度极化的N≡Ge基团对有机底物和过渡金属前体表现出多种反应性,强调了其在合成化学中的潜在用途。四元异腈(四元异腈的重基团14类似物)的研究主要依赖于在基质分离或气相条件下对瞬态物质的研究。现在,在缩合相中分离出了一个末端为N≡Ge三键和伪单配位锗原子的锗-异腈。它对选定的有机底物和过渡金属配合物的反应性也进行了探索。
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引用次数: 0
Ultraspecific RNA switches for robust mutation detection 用于稳健突变检测的超特异性RNA开关
IF 20.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-11-21 DOI: 10.1038/s41557-025-02000-w
Xianglin Zhu, Ruijie Deng
Subtle mutations in the genome play key roles in both disease progression and pathogen evolution. Now, a fluorescent aptamer-based RNA switch has been shown to enable rapid and robust detection of single nucleotide mutations.
基因组中的微妙突变在疾病进展和病原体进化中都起着关键作用。现在,一种基于核酸适配体的荧光RNA开关已经被证明能够快速和可靠地检测单核苷酸突变。
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引用次数: 0
Bridging aqueous electrochemistry and non-aqueous chemistry for chemical production 在化工生产中架起了水电化学和非水化学的桥梁。
IF 20.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-11-21 DOI: 10.1038/s41557-025-01987-6
Electrifying nonaqueous thermocatalytic reactions is challenging. Now, a multiphase approach that uses aqueous electrochemistry to drive a nonaqueous reaction through aqueous–nonaqueous interfacial proton-coupled electron transfer is developed for the production of hydrogen peroxide.
使非水热催化反应带电是一项挑战。现在,开发了一种多相方法,利用水电化学通过水-非水界面质子耦合电子转移来驱动非水反应,用于生产过氧化氢。
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引用次数: 0
Determining chirality in crystalline powders through 3D electron diffraction 用三维电子衍射测定结晶粉末的手性
IF 20.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-11-21 DOI: 10.1038/s41557-025-02006-4
Lukas Palatinus
Determining the enantiomorphic excess in chiral solids remains a difficult task, yet it is crucial for the characterization of materials such as chiral catalysts. Now, a combination of 3D electron diffraction, dynamical diffraction calculations, and automated processing enables the quantification of enantiomorphs in a fast and reliable manner.
确定手性固体中的对构过剩仍然是一项艰巨的任务,但它对表征手性催化剂等材料至关重要。现在,3D电子衍射、动态衍射计算和自动化处理的结合使对映异构体的量化能够以快速可靠的方式进行。
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引用次数: 0
Programmable fluorescent aptamer-based RNA switches for rapid identification of point mutations 基于可编程荧光适配体的RNA开关,用于快速识别点突变
IF 20.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-11-21 DOI: 10.1038/s41557-025-01995-6
Zhaoqing Yan, Yudan Li, Amit Eshed, Kaiyue Wu, Zachary M. Ticktin, Vel Murugan, Efrem S. Lim, Fan Hong, Alexander A. Green
The ability to detect single nucleotide polymorphisms (SNPs) is critical for identifying genetic disorders, assessing pathogen drug resistance and preventing infection transmission. Achieving a delicate balance across sequence-specific recognition, RNA structural stability and functional efficacy based on SNP-induced changes is crucial for precise genotyping using RNA-based probes. Here we report on in silico-designed aptamer-based RNA switches, referred to as ‘fast aptamer-based reporters for single-nucleotide-specific identification and genotyping through hybridization’ (FARSIGHTs), that enable rapid, low-leakage and multiplexed identification of virtually any target sequence with single-nucleotide specificity. Activation of the FARSIGHT probe can occur in as little as 5 min, separate from upstream amplification. Coupling FARSIGHTs with isothermal amplification enables the robust detection of single nucleotide mutations at attomolar concentrations through strong fluorescence output. We have demonstrated this by distinguishing the SARS-CoV-2 Omicron variant from Alpha, Beta and Gamma with 100% accuracy in RNA from clinical saliva samples. FARSIGHTs can be easily reprogrammed for genotyping emerging pathogens, with potential uses in point-of-care infectious disease monitoring and personalized healthcare applications. The robust detection of single nucleotide variants (SNVs) remains a key challenge for rapid and multiplexed diagnostics. Now it is shown that FARSIGHT, a computationally designed aptamer-based RNA switch, achieves rapid, enzyme-free genotyping via domino-like coupled strand-displacement reactions. These systems provide attomolar sensitivity when coupled with isothermal amplification, multiplexed SNV discrimination and lateral flow readout.
检测单核苷酸多态性(snp)的能力对于鉴定遗传疾病、评估病原体耐药性和预防感染传播至关重要。在序列特异性识别、RNA结构稳定性和基于snp诱导变化的功能功效之间取得微妙的平衡对于使用RNA探针进行精确的基因分型至关重要。在这里,我们报道了基于硅设计的核酸适配体的RNA开关,被称为“基于核酸适配体的单核苷酸特异性鉴定和杂交基因分型快速报告器”(FARSIGHTs),它可以快速、低泄漏和多重鉴定几乎任何具有单核苷酸特异性的靶序列。FARSIGHT探针的激活可以在5分钟内发生,与上游扩增分离。将FARSIGHTs与等温扩增相结合,可以通过强荧光输出在原子摩尔浓度下检测单核苷酸突变。我们已经证明了这一点,通过从临床唾液样本的RNA中100%准确地区分出SARS-CoV-2 Omicron变体与α、β和γ。FARSIGHTs可以很容易地重新编程以对新出现的病原体进行基因分型,在即时传染病监测和个性化医疗保健应用中具有潜在的用途。单核苷酸变异(snv)的强大检测仍然是快速和多路诊断的关键挑战。现在,研究表明,FARSIGHT是一种计算设计的基于适配体的RNA开关,通过多米诺骨牌样的偶联链位移反应实现快速、无酶的基因分型。当与等温放大、多路SNV识别和横向流量读数相结合时,这些系统具有原子摩尔灵敏度。
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引用次数: 0
Computational design of superstable proteins through maximized hydrogen bonding 通过最大化氢键的超稳定蛋白质的计算设计。
IF 20.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-11-18 DOI: 10.1038/s41557-025-01998-3
Bin Zheng, Zhuojian Lu, Shangchen Wang, Lichao Liu, Mingjun Ao, Yurui Zhou, Guojing Tang, Ruishi Wang, Yuanhao Liu, Hantian Zhang, Yinying Meng, Jun Qiu, Tianfu Feng, Ziyi Wang, Renming Liu, Yuelong Xiao, Yutong Liu, Ziling Wang, Yifen Huang, Yajun Jiang, Peng Zheng
Hydrogen bonds are fundamental chemical interactions that stabilize protein structures, particularly in β sheets, enabling resistance to mechanical stress and environmental extremes. Here, inspired by natural mechanostable proteins with shearing hydrogen bonds, such as titin and silk fibroin, we de novo designed superstable proteins by maximizing hydrogen-bond networks within force-bearing β strands. Using a computational framework combining artificial intelligence-guided structure and sequence design with all-atom molecular dynamics MD simulations, we systematically expanded protein architecture, increasing the number of backbone hydrogen bonds from 4 to 33. The resulting proteins exhibited unfolding forces exceeding 1,000 pN, about 400% stronger than the natural titin immunoglobulin domain, and retained structural integrity after exposure to 150 °C. This molecular-level stability translated directly to macroscopic properties, as demonstrated by the formation of thermally stable hydrogels. Our work introduces a scalable and efficient computational strategy for engineering robust proteins, offering a generalizable approach for the rational design of resilient protein systems for extreme environments. Nature contains a variety of mechanostable proteins, which all bear extensive hydrogen-bond networks within their β-sheet architectures to sustain high stability under stress. Now through integrating AI-guided design alongside MD simulations and by maximizing hydrogen bonds in β strands, SuperMyo proteins with nanonewton mechanical stability and thermal resilience up to 150 °C were created.
氢键是稳定蛋白质结构的基本化学相互作用,特别是在β片中,使其能够抵抗机械应力和极端环境。在这里,受天然具有剪切氢键的机械稳定蛋白(如titin和丝素蛋白)的启发,我们通过最大化承载力的β链内的氢键网络,重新设计了超稳定蛋白。利用人工智能引导的结构和序列设计与全原子分子动力学MD模拟相结合的计算框架,我们系统地扩展了蛋白质结构,将主氢键的数量从4个增加到33个。所得到的蛋白显示出超过1,000 pN的展开力,比天然titin免疫球蛋白结构域强约400%,并且在暴露于150°C后保持结构完整性。这种分子水平的稳定性直接转化为宏观性质,正如热稳定水凝胶的形成所证明的那样。我们的工作引入了一种可扩展和高效的工程健壮蛋白计算策略,为极端环境下弹性蛋白系统的合理设计提供了一种可推广的方法。
{"title":"Computational design of superstable proteins through maximized hydrogen bonding","authors":"Bin Zheng,&nbsp;Zhuojian Lu,&nbsp;Shangchen Wang,&nbsp;Lichao Liu,&nbsp;Mingjun Ao,&nbsp;Yurui Zhou,&nbsp;Guojing Tang,&nbsp;Ruishi Wang,&nbsp;Yuanhao Liu,&nbsp;Hantian Zhang,&nbsp;Yinying Meng,&nbsp;Jun Qiu,&nbsp;Tianfu Feng,&nbsp;Ziyi Wang,&nbsp;Renming Liu,&nbsp;Yuelong Xiao,&nbsp;Yutong Liu,&nbsp;Ziling Wang,&nbsp;Yifen Huang,&nbsp;Yajun Jiang,&nbsp;Peng Zheng","doi":"10.1038/s41557-025-01998-3","DOIUrl":"10.1038/s41557-025-01998-3","url":null,"abstract":"Hydrogen bonds are fundamental chemical interactions that stabilize protein structures, particularly in β sheets, enabling resistance to mechanical stress and environmental extremes. Here, inspired by natural mechanostable proteins with shearing hydrogen bonds, such as titin and silk fibroin, we de novo designed superstable proteins by maximizing hydrogen-bond networks within force-bearing β strands. Using a computational framework combining artificial intelligence-guided structure and sequence design with all-atom molecular dynamics MD simulations, we systematically expanded protein architecture, increasing the number of backbone hydrogen bonds from 4 to 33. The resulting proteins exhibited unfolding forces exceeding 1,000 pN, about 400% stronger than the natural titin immunoglobulin domain, and retained structural integrity after exposure to 150 °C. This molecular-level stability translated directly to macroscopic properties, as demonstrated by the formation of thermally stable hydrogels. Our work introduces a scalable and efficient computational strategy for engineering robust proteins, offering a generalizable approach for the rational design of resilient protein systems for extreme environments. Nature contains a variety of mechanostable proteins, which all bear extensive hydrogen-bond networks within their β-sheet architectures to sustain high stability under stress. Now through integrating AI-guided design alongside MD simulations and by maximizing hydrogen bonds in β strands, SuperMyo proteins with nanonewton mechanical stability and thermal resilience up to 150 °C were created.","PeriodicalId":18909,"journal":{"name":"Nature chemistry","volume":"18 2","pages":"364-373"},"PeriodicalIF":20.2,"publicationDate":"2025-11-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145550153","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Developing design guidelines for controlling charge transport in DNA. 开发控制DNA电荷传输的设计指南。
IF 20.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-11-18 DOI: 10.1038/s41557-025-01999-2
Zahra Aminiranjbar, Caglanaz Akin Gultakti, Amy Zhang, Ersin Emre Oren, Joshua Hihath

Conceptual frameworks that describe the electronic structure of molecules are an integral part of understanding chemical structures and reaction mechanisms and designing organic compounds. Here we develop a preliminary set of design guidelines for controlling the electronic structure of DNA. Recent work indicates that charge delocalization occurs over several bases and results in coherence lengths greater than a single base pair. To examine the interactions between bases and their effects on delocalization, this study investigates the influence of nearest-neighbour base pair interactions on the charge transport properties of DNA duplexes that are predominantly composed of guanine-cytosine base pairs. Results show that, by manipulating the sequence, the conductance can be substantially modified without altering the molecular composition. The electronic density of states are then analysed to deduce a set of design guidelines aimed at maintaining high conductance values in long duplexes. Utilizing these rules, we demonstrate that 20-base-pair DNA sequences can exhibit conductance values surpassing 1 × 10-3G0.

描述分子电子结构的概念框架是理解化学结构和反应机制以及设计有机化合物不可或缺的一部分。在这里,我们开发了一套初步的设计指导方针,以控制DNA的电子结构。最近的研究表明,电荷离域发生在多个碱基上,导致相干长度大于单个碱基对。为了研究碱基之间的相互作用及其对离域的影响,本研究研究了最近邻碱基对相互作用对主要由鸟嘌呤-胞嘧啶碱基对组成的DNA双链的电荷传输特性的影响。结果表明,通过控制序列,可以在不改变分子组成的情况下大幅度改变电导。然后分析状态的电子密度,以推导出一套设计准则,旨在保持长双工的高电导值。利用这些规则,我们证明了20碱基对DNA序列可以显示超过1 × 10-3G0的电导值。
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引用次数: 0
Dearomative syn-1,4-hydroalkylation and C(sp2)−H alkylation of arenes controlled by chemoselective electrolysis 化学选择性电解控制芳烃的脱芳syn-1,4-氢烷基化和C(sp2)-H烷基化。
IF 20.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-11-17 DOI: 10.1038/s41557-025-02001-9
Chao Wan, Chao Yang, Magnus Rueping, Chen Zhu, Lin Guo, Wujiong Xia
Dearomative functionalization of arenes represents a powerful synthetic strategy for the rapid assembly of complex chemical architectures. A significant challenge in this process is overcoming the inherent aromaticity of arenes. Here, leveraging the potential of organic electrolysis, we show the development of a dearomative syn-1,4-hydroalkylation reaction targeting electron-deficient arenes and heteroarenes. This electrochemical approach, conducted under mild, operationally straightforward and scalable conditions, facilitates the synthesis of alkylated syn-1,4-cyclohexadienes with high chemoselectivity, regioselectivity and stereoselectivity. In addition, this alkylation protocol is controllable and switchable. By employing a niobium plate as the anode and nBu4NBr as the supporting electrolyte, our method enables the para-selective C(sp2)–H alkylation of (hetero)arenes via electrolysis. Both reactions exhibit broad substrate scope and demonstrate excellent compatibility with various electron-deficient arenes and alkyl bromides. Furthermore, preliminary mechanistic studies and density functional theory calculations have been performed to elucidate the reaction mechanism and to rationalize the observed chemoselectivity, regioselectivity and stereoselectivity. Dearomative functionalization is an extraordinary approach for transforming inert, two-dimensional arenes into three-dimensional architectures. Now it has been shown that electrolysis could facilitate dearomative syn-1,4-hydroalkylation and para-selective C(sp2)–H alkylation of electron-deficient (hetero)arenes. Mechanistic studies indicate that the chemoselectivity is primarily governed by the choice of supporting electrolyte and electrode.
芳烃的脱芳功能化为复杂化学结构的快速组装提供了一种强有力的合成策略。这一过程的一个重大挑战是克服芳烃固有的芳香性。在这里,利用有机电解的潜力,我们展示了一个针对缺电子芳烃和杂芳烃的去芳香syn-1,4-氢烷基化反应的发展。这种电化学方法在温和、操作简单和可扩展的条件下进行,有助于合成具有高化学选择性、区域选择性和立体选择性的烷基化syn1,4 -环己二烯。此外,这种烷基化协议是可控的和可切换的。该方法采用铌板为阳极,nBu4NBr为支撑电解质,实现了(杂)芳烃的电解合选C(sp2)-H烷基化反应。这两种反应都表现出广泛的底物范围,并与各种缺电子芳烃和烷基溴具有良好的相容性。此外,还进行了初步的机理研究和密度泛函理论计算,阐明了反应机理,并对所观察到的化学选择性、区域选择性和立体选择性进行了理顺。
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引用次数: 0
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Nature chemistry
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