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Isolate Specific Transcriptome Changes Exerted by Isavuconazole Treatment in Candida auris.
IF 3.6 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-12-27 DOI: 10.1007/s11046-024-00919-1
Noémi Balla, Fruzsina Kovács, Zoltán Tóth, Andrea Harmath, Aliz Bozó, László Majoros, Renátó Kovács, Ágnes Jakab

The sudden emergence of multidrug- and pan-resistant Candida auris isolates, combined with limited treatment options, poses significant global challenges in healthcare settings. Combination based therapies are promising alternative options to overcome C. auris related infections, where echinocandin and isavuconazole (ISA) combinations may be an interesting and promising approach. Understanding the molecular mechanisms underlying ISA treatment is crucial for developing novel therapeutic recommendations. Therefore, we investigated the gene transcription profiles of non-wild type (non-WT) and wild type (WT) C. auris isolates from the South Asian clade following ISA exposure using total RNA sequencing. The non-WT isolate was classified according to the previously reported tentative epidemiological cut-off value of ≤ 1 mg/L. ISA treatment resulted in the upregulation of 158 and 134 genes and the downregulation of 119 and 96 genes in the non-WT and WT isolates, respectively, compared with untreated samples. In general, ISA-treated isolates exhibited increased transcription of the transcriptional factor UPC2, the drug transporter MDR1, vacuolar calcium-ATPase PMC1, and several ergosterol biosynthesis genes. The WT isolate showed pronounced enrichment of genes involved in sphingolipid biosynthesis, adhesion, and drug transport. These findings suggest that alterations in membrane lipid composition and modulation of drug efflux transporters are critical processes contributing to ISA susceptibility in case of WT isolates.

{"title":"Isolate Specific Transcriptome Changes Exerted by Isavuconazole Treatment in Candida auris.","authors":"Noémi Balla, Fruzsina Kovács, Zoltán Tóth, Andrea Harmath, Aliz Bozó, László Majoros, Renátó Kovács, Ágnes Jakab","doi":"10.1007/s11046-024-00919-1","DOIUrl":"https://doi.org/10.1007/s11046-024-00919-1","url":null,"abstract":"<p><p>The sudden emergence of multidrug- and pan-resistant Candida auris isolates, combined with limited treatment options, poses significant global challenges in healthcare settings. Combination based therapies are promising alternative options to overcome C. auris related infections, where echinocandin and isavuconazole (ISA) combinations may be an interesting and promising approach. Understanding the molecular mechanisms underlying ISA treatment is crucial for developing novel therapeutic recommendations. Therefore, we investigated the gene transcription profiles of non-wild type (non-WT) and wild type (WT) C. auris isolates from the South Asian clade following ISA exposure using total RNA sequencing. The non-WT isolate was classified according to the previously reported tentative epidemiological cut-off value of ≤ 1 mg/L. ISA treatment resulted in the upregulation of 158 and 134 genes and the downregulation of 119 and 96 genes in the non-WT and WT isolates, respectively, compared with untreated samples. In general, ISA-treated isolates exhibited increased transcription of the transcriptional factor UPC2, the drug transporter MDR1, vacuolar calcium-ATPase PMC1, and several ergosterol biosynthesis genes. The WT isolate showed pronounced enrichment of genes involved in sphingolipid biosynthesis, adhesion, and drug transport. These findings suggest that alterations in membrane lipid composition and modulation of drug efflux transporters are critical processes contributing to ISA susceptibility in case of WT isolates.</p>","PeriodicalId":19017,"journal":{"name":"Mycopathologia","volume":"190 1","pages":"5"},"PeriodicalIF":3.6,"publicationDate":"2024-12-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142896455","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Fungal Keratitis Caused by Humicola sardiniae.
IF 3.6 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-12-23 DOI: 10.1007/s11046-024-00913-7
Atsuhiko Fukuto, Kaori Mitoma, Keisuke Nakamura, Kayoko Tadera, Taiichiro Chikama, Takashi Yaguchi
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引用次数: 0
Recurrent Enteritis and Intestinal Obstruction in a Patient with Chronic Mucocutaneous Candidiasis due to STAT1 Gain-of-Function Mutation.
IF 3.6 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-12-20 DOI: 10.1007/s11046-024-00912-8
Mingfen Luo, Huan Huang, Hanhui Nie, Yinghui Liu, Yangxia Chen, Fuying Zheng, Liyan Xi, Hongfang Liu

We presented a case of chronic mucocutaneous candidiasis (CMC) due to STAT1 GOF mutation with recurrent enteritis and intestinal obstruction. A 33-year-old woman complained of recurrent oral erosion and finger (toe) nails damage for over 30 years. Candida albicans were cultured from the oral mucosa and nails. Sanger sequencing revealed a gain-of-function mutation in STAT1 (c.A1159 G, p.T387A). Since the age of 37, she developed recurrent enteritis and intestinal obstruction. Laboratory examinations revealed an increased pSTAT1 protein expression and a decreased proportion of Th17 cells in peripheral blood lymphocyte (PBMC), with a high expression of pSTAT1 and scarce expression of IL17A observed in intestinal immunohistochemistry. Intestinal obstruction had not previously been reported as the main clinical manifestation in STAT1 GOF patients. We speculated that the low levels of IL17A impaired the intestinal barrier, which might lead to gastrointestinal disorders in this patient. This case expanded the clinical phenotype of heterozygous STAT1 GOF patients.

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引用次数: 0
The Diagnosis of Talaromyces marneffei Central Nervous System Infection in an HIV-Negative Child by Cytological Assay of a Cerebrospinal Fluid Smear.
IF 3.6 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-12-20 DOI: 10.1007/s11046-024-00914-6
Qiang Yao, Xiaoying Fu, Zhenhu Lin, Meizhu Luo, Xueyan Chen
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引用次数: 0
Affinity of Malassezia and Other Yeasts for Pulmonary Lipids.
IF 3.6 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-12-07 DOI: 10.1007/s11046-024-00910-w
Violeta Esteban, Pablo Gilabert, Consuelo Ferrer, Beatriz Gálvez, Eusebi Chiner, María Francisca Colom

Pulmonary surfactant, the primary substance lining the epithelium of the human Lower Respiratory Tract (LRT), is rich in lipids, with dipalmitoyl-phosphatidylcholine (DPPC) being the most abundant. Although surfactants are known to have antifungal activity against some yeast species, the significant presence of species like Malassezia restricta in the lung mycobiome suggests that these yeasts may exhibit some level of lipo-tolerance or even lipo-affinity for pulmonary lipids. This study explored the affinity and tolerance of yeasts, identified as significant members of the lung microbiome, to pulmonary lipids through culture-based methods. Eleven species from the genera Malassezia, Candida (including the new genera Nakaseomyces and Meyerozyma), and Cryptococcus were tested for their growth on media containing pulmonary lipids such as DPPC and commercial porcine surfactant and in other culture medium that contain non-pulmonary lipids such as glycerol monostearate and tweens. The yeasts' lipo-affinity or lipo-tolerance was assessed based on their growth on these lipids compared to standard media, specifically Modified Leeming Notman Agar (MLNA) for Malassezia species and Sabouraud Dextrose Agar (SDA) for the other genera. The addition of DPPC or surfactant to the media enhanced the growth of most Malassezia yeasts and some Cryptococcus species. C. parapsilosis, Meyerozyma guilliermondii and Cryptococcus neoformans s.s. showed similar growth to that on the standard media, while the other yeasts primarily demonstrated lipo-tolerance without lipo-affinity for these compounds. To our knowledge, this is the first report on the influence of pulmonary lipids on the in vitro growth of Malassezia spp. and other yeast members of the lung mycobiome. Some yeasts, such as Malassezia restricta, commonly found in the lower respiratory tract (LRT), exhibit specific affinity for lung lipids like DPPC and commercial porcine surfactant. This finding suggests that lung lipids may play a significant role in shaping the LRT mycobiome.

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引用次数: 0
Invasive Fungal Diseases of Combat Wounds: Burden, Epidemiology, and Mycology. 战伤的侵袭性真菌病:负担、流行病学和真菌学。
IF 3.6 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-11-21 DOI: 10.1007/s11046-024-00908-4
Ashleigh Roberds, Alexander G Bobrov, Riina Rautemaa-Richardson, Thomas J Walsh

During the last two decades, wound invasive fungal diseases (WIFDs) have reemerged as important causes of mortality and morbidity in military personnel and civilian casualties in war areas. Historically, mycotic infections acquired in combat operations during Vietnam War and were associated with burn wounds. Modern combat related WIFDs are almost exclusively associated with severe traumatic events which encompass blast exposure as the primary mechanism of injury and subsequent extremity amputation and extensive blood loss. Such infections often lead to deep tissue necrosis, long hospitalizations, extensive surgeries, and more severe amputation. Studies of combat related WIFDs among U.S. military personnel in Operation Enduring Freedom (Afghanistan) demonstrated incidence rates of approximately 7% and crude mortality of 8.5%. WIFDs were also seen in U.K. military personnel returning from Afghanistan and are common in the current Ukraine and Gaza conflicts. Mucorales, Aspergillus and Fusarium species are the predominant causes of WIFDs. These molds are opportunistic pathogens which thrive in patients with immune system imbalances following traumatic injury. They are ubiquitous environmental fungi found in a variety of soils but there are significant regional differences depending on the local soil type, vegetation, and climate. The management of WIFDs is complicated by the limited efficacy of current antifungals on many of these environmental species and by emerging antifungal resistance globally. This review provides an overview of the global burden, epidemiology, and clinical features of combat-related fungal infections with the aim to provide a better understanding of the threat posed for wounded Service Members and civilians.

在过去二十年里,伤口侵袭性真菌病(WIFDs)再次成为战争地区军人和平民伤亡的重要致死和发病原因。历史上,越战期间在作战行动中获得的真菌感染与烧伤有关。现代与作战有关的 WIFD 几乎都与严重创伤事件有关,包括以爆炸为主要致伤机制、随后的四肢截肢和大量失血。此类感染通常会导致深层组织坏死、长期住院、广泛手术和更严重的截肢。对阿富汗 "持久自由行动"(Operation Enduring Freedom)中的美军人员进行的与作战相关的 WIFD 研究表明,发病率约为 7%,粗死亡率为 8.5%。从阿富汗返回的英国军人中也出现了 WIFD,在当前的乌克兰和加沙冲突中也很常见。粘菌、曲霉和镰刀菌是 WIFD 的主要致病菌。这些霉菌是机会性病原体,在外伤后免疫系统失衡的患者体内大量繁殖。它们是无处不在的环境真菌,存在于各种土壤中,但由于当地的土壤类型、植被和气候不同,地区差异也很大。由于目前的抗真菌药物对许多这类环境真菌的疗效有限,而且全球范围内出现了抗真菌抗药性,因此对 WIFD 的管理变得更加复杂。本综述概述了与作战有关的真菌感染的全球负担、流行病学和临床特征,旨在让人们更好地了解真菌感染对受伤军人和平民造成的威胁。
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引用次数: 0
Dermatophytes: Update on Clinical Epidemiology and Treatment. 皮癣菌:临床流行病学和治疗的最新进展。
IF 3.6 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-11-21 DOI: 10.1007/s11046-024-00909-3
Aleksandra Barac, Mihailo Stjepanovic, Snjezana Krajisnik, Goran Stevanovic, Bianca Paglietti, Branko Milosevic

Dermatophytes represent the largest and most common group of fungal infections, impacting 25% of the global population. Among them, Trichophyton rubrum has emerged as the predominant species, responsible for a range of conditions such as tinea corporis, tinea pedis, onychomycosis, tinea cruris, and tinea manuum. Although dermatophyte incidence varies geographically, there is a noticeable rise in cases caused by T. indotineae, a strain that exhibits resistance to terbinafine. In the past decade zoophilic dermatophyte T. mentagophytes genotype VII (now known as T. interdigitale) gains a growing importance, due to its increasing frequency, the severity of the clinical manifestation and mode of transmission. Tinea infections present with various clinical symptoms and can affect individuals of all ages, from tinea pedis in adults to tinea capitis in children. Among adults globally, tinea unguium (onychomycosis) is the most common form of dermatophytosis, affecting 5.5% of the general population. Tinea unguium is more frequently seen in developed countries, while tinea capitis is more common in developing nations. The COVID-19 pandemic has led to an increase in cases of tinea faciei, likely due to prolonged mask-wearing. Terbinafine remains the preferred treatment for dermatophyte infections worldwide due to its potent fungicidal properties, minimal risk of drug interactions, and fewer side effects compared to other oral antifungals. Itraconazole and terbinafine appear to be equally effective and safe for treating tinea cruris and tinea corporis. However, the rising resistance of dermatophytes to these antifungal drugs, along with frequent recurrences of dermatophytosis in certain regions, is becoming a significant public health concern.

皮癣菌是最大、最常见的真菌感染群,影响着全球 25% 的人口。其中,红色毛癣菌是最主要的真菌,可引起一系列疾病,如体癣、足癣、甲癣、股癣和真菌癣菌病。虽然皮肤癣菌的发病率因地域而异,但由对特比萘芬有抗药性的吲哚癣菌(T. indotineae)引起的病例明显增多。在过去十年中,嗜动物皮癣菌 T. mentagophytes 基因型 VII(现称为 T. interdigitale)的重要性与日俱增,因为它的发病率、临床表现的严重程度和传播方式都在不断增加。癣菌感染表现出各种临床症状,可影响各个年龄段的人,从成人的足癣到儿童的头癣。在全球成年人中,股癣(甲癣)是最常见的皮肤癣菌病,发病率占总人口的 5.5%。股癣多见于发达国家,而头癣则多见于发展中国家。COVID-19 大流行导致面癣病例增加,这可能是由于长期戴口罩所致。与其他口服抗真菌药相比,特比萘芬具有强效杀真菌特性,药物相互作用风险极低,副作用较少,因此仍是全球治疗皮癣菌感染的首选药物。伊曲康唑和特比萘芬在治疗皮肤癣菌和体癣方面似乎同样有效和安全。然而,皮癣菌对这些抗真菌药物的耐药性不断增加,加上某些地区皮癣病的频繁复发,正成为一个重大的公共卫生问题。
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引用次数: 0
Epidemiological Trends of Mucormycosis in Europe, Comparison with Other Continents. 欧洲粘孢子菌病的流行趋势,与其他大陆的比较。
IF 3.6 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-11-20 DOI: 10.1007/s11046-024-00907-5
Anna Skiada, Ioannis Pavleas, Maria Drogari-Apiranthitou

Mucormycosis is an invasive fungal infection, caused by fungi of the order Mucorales, and it is associated with high morbidity and mortality. The epidemiology of mucormycosis is evolving. The incidence, underlying risk factors, clinical presentation, as well as the responsible mucoralean agents, vary by geographic region. The estimated incidence in developed countries ranges from less than 0.06 to 0.3 cases per 100,000 population per year, while in India, it reaches approximately 14 cases per 100,000 population per year, which is about 80 times higher. In European countries the estimated incidence ranges from less than 0.04 to 0.12 per 100,000 population per year. Diabetes mellitus (DM) is the leading underlying disease globally. In Europe, hematological malignancies are the most common risk factor for mucormycosis, while in Asia diabetes predominates. The rhino-cerebral form of mucormycosis is most commonly seen in patients with DM, whereas pulmonary mucormycosis in patients with hematological malignancies and transplants. The most common species globally is Rhizopus arrhizus, whereas new emerging species only occasionally cause infection in Europe. However, vigilance is required, as they may raise concerns-especially in light of climate change- due to their potential to cause serious infections in both immunocompetent and immunosuppressed individuals.

粘孢子菌病是一种侵袭性真菌感染,由粘孢子菌目真菌引起,发病率和死亡率都很高。粘孢子菌病的流行病学在不断发展。发病率、潜在风险因素、临床表现以及致病的粘孢子菌因地理区域而异。在发达国家,估计发病率为每年每 10 万人中有不到 0.06 到 0.3 个病例,而在印度,每年每 10 万人中有大约 14 个病例,大约高出 80 倍。在欧洲国家,估计发病率从每年每 10 万人中不到 0.04 例到 0.12 例不等。糖尿病(DM)是全球最主要的基础疾病。在欧洲,血液恶性肿瘤是粘液瘤病最常见的风险因素,而在亚洲,糖尿病则占主导地位。鼻-脑型粘液瘤病最常见于糖尿病患者,而肺型粘液瘤病则常见于血液恶性肿瘤和器官移植患者。全球最常见的菌种是Rhizopus arrhizus,而新出现的菌种只是偶尔在欧洲引起感染。然而,由于它们有可能对免疫功能健全和免疫抑制的人造成严重感染,因此可能会引起人们的关注,特别是在气候变化的情况下,因此需要提高警惕。
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引用次数: 0
Phaeohyphomycosis Due to Verruconis gallopava: Rare Indolent Pulmonary Infection or Severe Cerebral Fungal Disease? Verruconis gallopava引起的真菌病:罕见的惰性肺部感染还是严重的脑部真菌病?
IF 3.6 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-11-20 DOI: 10.1007/s11046-024-00903-9
Laura Terracol, Samia Hamane, Victor Euzen, Blandine Denis, Stéphane Bretagne, Sarah Dellière

Introduction: Phaeohyphomycoses are uncommon and poorly understood opportunistic fungal infections, characterized by a wide spectrum of clinical manifestations ranging from localized skin lesions to disseminated disease. Most frequent genera are Alternaria, Cladophialophora, Exophiala or Curvularia. Less common ones, such as Verruconis gallopava, initially described as responsible of encephalitis of turkeys, pose significant challenges for diagnosis and treatment.

Material and methods: Following the description of a clinical case, we performed a comprehensive review of 48 cases of V. gallopava infection, a rarely reported species from 1986 to 2024.

Results: Solid organ transplant recipients and patients with hematological malignancies are the population most at-risk. Clinical presentation is nonspecific but can be divided in two main entities, pulmonary and cerebral localizations. This later is associated with a mortality rate over 80% and was significantly more frequently reported in liver transplant recipients (p = 0.03). When tested, ß-D-glucans were positive in all cases. Antifungal susceptibility testing demonstrated low MICs for amphotericin B and all azoles but isavuconazole and fluconazole. Clinical outcomes support the use of amphotericin B, voriconazole, itraconazole and posaconazole as valid treatment options.

Discussion: It is not known whether the cerebral cases are primary or secondary to pulmonary lesions. The indolent pulmonary lesions should prompt a complete work-up including biopsy with pathology and mycology expertise since the differential diagnosis is a cancer lesion.

导言:拟真菌病是一种不常见的机会性真菌感染,人们对其了解甚少,临床表现多种多样,从局部皮肤病变到播散性疾病不等。最常见的真菌属有 Alternaria、Cladophialophora、Exophiala 或 Curvularia。较少见的菌属,如 Verruconis gallopava,最初被描述为火鸡脑炎的罪魁祸首,给诊断和治疗带来了巨大挑战:在描述了一例临床病例后,我们对1986年至2024年间48例V. gallopava感染病例进行了全面回顾:结果:实体器官移植受者和血液恶性肿瘤患者是高危人群。临床表现无特异性,但可分为肺部和脑部两大实体。这种疾病的死亡率超过 80%,肝移植受者中的发病率明显更高(p = 0.03)。经检测,所有病例中的ß-D-葡聚糖均呈阳性。抗真菌药敏试验显示,两性霉素 B 和所有唑类药物的 MIC 值较低,但异唑醇和氟康唑除外。临床结果支持使用两性霉素 B、伏立康唑、伊曲康唑和泊沙康唑作为有效的治疗方案:讨论:目前尚不清楚脑部病例是原发性还是继发于肺部病变。由于鉴别诊断是癌症病变,因此对肺部的惰性病变应进行全面检查,包括活检和病理学及真菌学检查。
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引用次数: 0
Epidemiological survey of 32,786 culture-positive dermatophytosis cases in Hangzhou from 2018 to 2023. 2018年至2023年杭州市32786例培养阳性皮癣病流行病学调查。
IF 3.6 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-11-13 DOI: 10.1007/s11046-024-00899-2
Qiuping Li, Jiajia Li, Huilin Zhi, Wenwen Lv, Bo Sang, Yan Zhong, Xiaoyu Chen, Xiujiao Xia, Zehu Liu

Background: With the rapid development of the economy and changes in lifestyle in recent years, the epidemiological pattern of dermatophytosis has changed. We analyzed the epidemiological features of dermatophytosis in a hospital in Hangzhou from 2018 to 2023.

Methods: Data from patients with culture-positive dermatophytosis were obtained from the Laboratory Information System of the Mycology Laboratory of our hospital. Dermatophyte isolates were mainly identified by macroscopic and microscopic features of the colonies.

Results: There were 32,786 patients with culture-positive dermatophytosis during the 6-year period, including 16,789 male patients and 15,990 female patients. Patients' ages ranged from 1 month to 97 years. Tinea unguium accounted for the largest proportion (14,879, 45.38%), which was mainly prevalent among females (8946, 60.13%). Significant gender differences were observed in all clinical types of dermatophytosis, except for tinea pedis. In total, 15,486 (47.73%) patients aged 21-40 years. The median age of patients with tinea manum and tinea capitis was the highest (49 years) and the lowest (5 years), respectively. Nine species of isolated dermatophytes were identified, of which Trichophyton rubrum accounted for 90.20% (29,573 cases). M. canis accounted for 66.80% of isolated dermatophytes from tinea capitis. The isolation rates of zoophilic species were 43.41% in tinea faciei and 18.90% in tinea corporis.

Conclusion: T. rubrum was absolutely predominant agent of dermatophytosis except tinea capitis in which M. canis was the most common organism. The prevalence of zoophilic dermatophytes has increased in tinea faciei and tinea corporis. Tinea unguium was the major clinical form of dermatophytosis, and it was more prevalent among females. The onset peak of dermatophytosis was in the age group of 21-40 years, except for tinea capitis.

背景:近年来,随着经济的快速发展和生活方式的改变,皮癣的流行模式也发生了变化。我们分析了2018年至2023年杭州市某医院皮癣的流行病学特征。方法:1:从我院真菌学实验室的实验室信息系统中获取培养阳性的皮癣患者数据。主要通过菌落的宏观和微观特征对分离出的皮癣菌进行鉴定:结果:6年间,共有32 786名患者的皮癣菌培养呈阳性,其中男性患者16 789名,女性患者15 990名。患者年龄从 1 个月到 97 岁不等。其中,皮肤癣菌所占比例最大(14879 人,45.38%),主要流行于女性(8946 人,60.13%)。除足癣外,所有临床类型的皮癣都存在明显的性别差异。共有 15 486 名患者(47.73%)的年龄在 21-40 岁之间。人癣和头癣患者的年龄中位数分别最高(49 岁)和最低(5 岁)。经鉴定,分离出的皮癣菌有九种,其中红色毛癣菌占 90.20%(29 573 例)。在从头癣中分离出的皮癣菌中,犬毛癣菌占 66.80%。嗜动物种的分离率在面癣中为 43.41%,在体癣中为 18.90%:结论:除头癣外,红癣菌绝对是皮癣的主要病原体,犬癣菌(M. canis)是最常见的病原体。嗜动物皮癣菌在头癣和体癣中的流行率有所上升。股癣是皮肤癣菌病的主要临床形式,女性发病率更高。除头癣外,皮癣的发病高峰在 21-40 岁年龄组。
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引用次数: 0
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Mycopathologia
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