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The Cologne ECMM Excellence Center: A Two-Year Analysis of External Consultation Service for Invasive Fungal Infections 科隆 ECMM 高级研究中心:侵袭性真菌感染外部咨询服务两年分析
IF 5.5 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-03-11 DOI: 10.1007/s11046-023-00822-1

Abstract

The European Confederation of Medical Mycology (ECMM), formed due to the surge in invasive fungal infections (IFI), initiated the Excellence Centers program in 2016 to guide stakeholders to leading medical mycology sites. This report focuses on the Cologne ECMM Excellence Center, recognized with Diamond status for active global involvement in 2017. The center offers free consultation via email and phone, responding within 24 h for life-threatening IFI, collecting data on origin, pathogens, infection details, and more. Over two years, 189 requests were received globally, predominantly from Germany (85%), mainly involving Aspergillus spp., Mucorales, and Candida spp. Fungal mixed infections occurred in 4% of cases. The center's service effectively addresses IFI challenges, advocating for a comprehensive study encompassing all ECMM Excellence Centers to enhance global mycological care. Proactive expansion of consultancy platforms is crucial, with future analyses needed to assess expert advice's impact on patient outcomes.

摘要 欧洲医学真菌学联合会(ECMM)因侵袭性真菌感染(IFI)激增而成立,于 2016 年启动了卓越中心计划,以引导利益相关者前往领先的医学真菌学研究基地。本报告重点介绍科隆 ECMM 卓越中心,该中心因 2017 年积极参与全球活动而被评为钻石级中心。该中心通过电子邮件和电话提供免费咨询,在 24 小时内对危及生命的 IFI 做出回应,并收集有关来源、病原体、感染细节等数据。两年来,全球共收到 189 份请求,主要来自德国(85%),主要涉及曲霉菌属、黏菌属和念珠菌属,真菌混合感染占 4%。该中心的服务有效地应对了 IFI 的挑战,倡导开展一项包括所有欧洲真菌医学卓越中心在内的综合研究,以加强全球真菌学护理。积极拓展咨询平台至关重要,未来需要进行分析,评估专家建议对患者治疗效果的影响。
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引用次数: 0
ECMM Center of Excellence: A Shared Vision for the Diagnosis and Treatment of Fungal Infections. ECMM 高级研究中心:真菌感染诊断和治疗的共同愿景。
IF 5.5 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-03-11 DOI: 10.1007/s11046-024-00833-6
Martin Hoenigl, Cornelia Lass-Flörl, Jean-Pierre Gangneux, Vishnu Chaturvedi
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引用次数: 0
Circulatory Inflammatory Proteins as Early Diagnostic Biomarkers for Invasive Aspergillosis in Patients with Hematologic Malignancies-an Exploratory Study. 血液系统炎症蛋白作为血液恶性肿瘤患者侵袭性曲霉菌病的早期诊断生物标志物--一项探索性研究。
IF 5.5 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-02-26 DOI: 10.1007/s11046-024-00831-8
Robina Aerts, Isis Ricaño-Ponce, Mariolina Bruno, Toine Mercier, Diletta Rosati, Johan Maertens, Vinod Kumar, Agostinho Carvalho, Mihai G Netea, Martin Hoenigl

Objectives: Invasive aspergillosis (IA) is a major cause of mortality in immunocompromised patients and it is difficult to diagnose because of the lack of reliable highly sensitive diagnostics. We aimed to identify circulating immunological markers that could be useful for an early diagnosis of IA.

Methods: We collected longitudinally serum samples from 33 cases with probable/proven IA and two matched control cohorts without IA (one with microbiological and clinical evidence of bacterial or viral non-fungal pneumonia and one without evidence of infection, all matched for neutropenia, primary underlying disease, and receipt of corticosteroids/other immunosuppressants) at a tertiary university hospital. In addition, samples from an independent cohort (n = 20 cases of proven/probable IA and 20 matched controls without infection) were obtained. A panel of 92 circulating proteins involved in inflammation was measured by proximity extension assay. A random forest model was used to predict the development of IA using biomarkers measured before diagnosis.

Results: While no significant differences were observed between IA cases and infected controls, concentrations of 30 inflammatory biomarkers were different between cases and non-infected controls, of which nine were independently replicated: PD-L1, MMP-10, Interleukin(IL)-10, IL-15RA, IL-18, IL-18R1, CDCP1, CCL19 and IL-17C. From the differential abundance analysis of serum samples collected more than 10 days before diagnosis and at diagnosis, increased IL-17C concentrations in IA patients were replicated in the independent cohort.

Conclusions: An increased circulating concentration of IL-17C was detected both in the discovery and independent cohort, both at the time of diagnosis and in samples 10 days before the diagnosis of IA, suggesting it should be evaluated further as potential (early) biomarker of infection.

目的:侵袭性曲霉菌病(IA)是导致免疫力低下患者死亡的一个主要原因,由于缺乏可靠的高灵敏度诊断方法,该病很难诊断。我们的目的是找出有助于早期诊断侵袭性曲霉病的循环免疫标记物:我们在一家三级大学医院纵向采集了 33 例疑似/确诊 IA 病例的血清样本,以及两组未患 IA 的匹配对照组样本(其中一例有微生物学和临床证据证明患有细菌性或病毒性非真菌肺炎,另一例无感染证据,所有样本均与中性粒细胞减少症、原发性基础疾病、皮质类固醇/其他免疫抑制剂的接受情况相匹配)。此外,还从一个独立队列(n = 20 例已证实/可能感染的肺结核病例和 20 例未感染的匹配对照组)中获得了样本。通过近距离延伸测定法测量了92种参与炎症的循环蛋白。采用随机森林模型,利用诊断前测定的生物标志物预测IA的发展:结果:虽然在IA病例和感染对照组之间没有观察到明显差异,但在病例和非感染对照组之间有30种炎症生物标志物的浓度不同,其中9种是独立重复的:PD-L1、MMP-10、白细胞介素(IL)-10、IL-15RA、IL-18、IL-18R1、CDCP1、CCL19和IL-17C。通过对诊断前10多天和诊断时采集的血清样本进行差异丰度分析,IA患者体内IL-17C浓度的增加在独立队列中得到了复制:结论:在IA诊断时和诊断前10天采集的样本中,IL-17C在发现队列和独立队列中的循环浓度都有所增加,这表明IL-17C作为潜在的(早期)感染生物标记物应得到进一步评估。
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引用次数: 0
Eumycetoma with Atypical Manifestation Caused by Fusarium: First Case Diagnosed by PCR and Next-Generation Sequencing in China. 镰刀菌引起的表现不典型的真菌瘤:中国首例通过 PCR 和下一代测序确诊的病例
IF 5.5 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-02-26 DOI: 10.1007/s11046-023-00813-2
Xiao Liu, Ruoyu Li, Yinggai Song, Aiping Wang
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引用次数: 0
Polymorphisms in Innate and Adaptive Immune Genes in Subjects with Allergic Bronchopulmonary Aspergillosis Complicating Asthma. 过敏性支气管肺曲霉菌病并发哮喘患者的先天性和适应性免疫基因多态性。
IF 5.5 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-02-26 DOI: 10.1007/s11046-024-00834-5
Rimjhim Kanaujia, Amit Arora, Arunaloke Chakrabarti, Shivaprakash M Rudramurthy, Ritesh Agarwal

Innate and adaptive immunity play a crucial role in allergic bronchopulmonary aspergillosis (ABPA) pathogenesis. We performed next-generation sequencing using the Illumina TruSight One panel (4,811 human disease-associated genes, at least 20 × coverage) and selected 22 known immune genes (toll-like receptors (TLRs), C-type lectin, interleukin-4 receptor, and others). We included ABPA (n = 18), asthma without ABPA (n = 12), and healthy controls (n = 8). We analyzed 3011 SNPs from 22 genes and identified 145 SNPs (13 genes) that were present only in the disease groups and absent in controls. The SNP frequency overall was significantly higher in ABPA than in asthmatics (89/145 [61.4%] vs. 56/145 [38.6%], p = 0.0001). The SNP frequency in the TLR10 gene was also significantly higher in ABPA than in asthma (p = 0.017). Association analysis further revealed three genes having significant associations. Of these, NOS3 and HLA-DQB1 are associated with antimicrobial activity and adaptive immunity. More extensive studies are required to confirm our findings.

先天性免疫和适应性免疫在过敏性支气管肺曲霉菌病(ABPA)发病机制中起着至关重要的作用。我们使用 Illumina TruSight One 面板(4,811 个人类疾病相关基因,至少 20 × 覆盖率)进行了新一代测序,并选择了 22 个已知的免疫基因(收费样受体 (TLR)、C 型凝集素、白细胞介素-4 受体等)。我们的研究对象包括 ABPA(18 人)、无 ABPA 的哮喘(12 人)和健康对照组(8 人)。我们分析了 22 个基因中的 3011 个 SNPs,发现 145 个 SNPs(13 个基因)只存在于疾病组中,而在对照组中不存在。ABPA 患者的 SNP 频率总体上明显高于哮喘患者(89/145 [61.4%] vs. 56/145 [38.6%],P = 0.0001)。TLR10 基因中的 SNP 频率在 ABPA 患者中也明显高于哮喘患者(p = 0.017)。关联分析进一步显示,有三个基因存在显著关联。其中,NOS3 和 HLA-DQB1 与抗菌活性和适应性免疫有关。要证实我们的研究结果,还需要进行更广泛的研究。
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引用次数: 0
Isolated Cutaneous Granuloma Caused by Candida Parapsilosis: Case Report and Literature Review. 由副丝状念珠菌引起的孤立性皮肤肉芽肿:病例报告与文献综述
IF 5.5 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-02-26 DOI: 10.1007/s11046-023-00812-3
Xinyu Yang, Xingji Jin, Zhusheng Yang, Youxue Wang, Aihua Wei, Xiumin Yang

Candidal granuloma is an uncommon type of deep chronic cutaneous candidiasis. Candida albican is the most common causative pathogen for candidal granuloma. We report herein the original case of a 69-year-old Chinese woman presented with a 3-year of painful cutaneous lesion on the back of left hand. Physical examination revealed a 4 × 5 cm large infiltrative reddish plaque with unclear boundaries. The yellow-white crusts were observed on the uneven surface of plaque. Histopathological examination of biopsy tissue revealed that yeast cells and the horizontal section of hyphae in the dermis by hematoxylin eosin staining and periodic acid-Schiff staining. Finally, the pathogen was identified as Candida parapsilosis by mycological examination and molecular identification. The patient was treated with itraconazole oral 200 mg twice daily combined with topical terbinafine hydrochloride cream for 2 months. The lesions were fully resolved and no recurrence was observed. Since the cutaneous infection caused by C. parasilosis were rarely reported, we also reviewed all 11 cases of cutaneous infection caused by C. parapsilosis in the PubMed. Our study highlighted that chronic unilateral infiltrated plaques or ulcers should be aware of the occurrence of fungal granuloma including candidal granuloma especially in immunocompromised patients.

念珠菌肉芽肿是一种不常见的深部慢性皮肤念珠菌病。白色念珠菌是念珠菌肉芽肿最常见的致病菌。我们在此报告一例原始病例,患者为一名 69 岁的中国女性,左手背皮肤疼痛 3 年。体检发现一个 4 × 5 厘米大的浸润性淡红色斑块,边界不清。斑块表面凹凸不平,有黄白色结痂。活检组织的组织病理学检查显示,苏木精伊红染色和周期性酸-希夫染色显示真皮层中有酵母细胞和水平切片的菌丝。最后,通过真菌学检查和分子鉴定,确定病原体为副丝状念珠菌。患者接受了伊曲康唑口服,每次 200 毫克,每天两次,并外用盐酸特比萘芬乳膏治疗 2 个月。皮损完全消退,未见复发。由于寄生虫引起的皮肤感染鲜有报道,我们还查阅了 PubMed 上所有 11 例由副丝虫引起的皮肤感染病例。我们的研究强调,慢性单侧浸润性斑块或溃疡应警惕真菌肉芽肿(包括念珠菌肉芽肿)的发生,尤其是免疫力低下的患者。
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引用次数: 0
Cutaneous Phaeohyphomycosis of Caused by Microsphaeropsis arundini. 由阿伦迪尼小螺旋体(Microsphaeropsis arundini)引起的皮肤白癣菌病(Phaeohyphomycosis)。
IF 5.5 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-02-26 DOI: 10.1007/s11046-023-00815-0
Rifeng Chen, Dongyan Zheng, Xiuying Li, Cunwei Cao, Jiaguang Su
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引用次数: 0
Imported Case of Disseminated Blastomycosis in India. 印度播散性布氏杆菌病的输入病例。
IF 5.5 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-02-26 DOI: 10.1007/s11046-023-00821-2
Sudesh Gourav, Saurav Sekhar Paul, Gagandeep Singh, Manish Soneja, Immaculata Xess, Himanshu Mishra, Bhaskar Rana, Sonakshi Gupta, Mragnayani Pandey
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引用次数: 0
Fungal Colonization of the Airways of Patients with Cystic Fibrosis: the Role of the Environmental Reservoirs. 囊性纤维化患者呼吸道的真菌定植:环境蓄水池的作用。
IF 5.5 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-02-26 DOI: 10.1007/s11046-023-00818-x
Kévin Ravenel, Hélène Guegan, Amandine Gastebois, Jean-Philippe Bouchara, Jean-Pierre Gangneux, Sandrine Giraud

Filamentous fungi frequently colonize the airways of patients with cystic fibrosis and may cause severe diseases, such as the allergic bronchopulmonary aspergillosis. The most common filamentous fungi capable to chronically colonize the respiratory tract of the patients are Aspergillus fumigatus and Scedosporium species. Defining the treatment strategy may be challenging, the number of available drugs being limited and some of the causative agents being multiresistant microorganisms. The knowledge of the fungal niches in the outdoor and indoor environment is needed for understanding the origin of the contamination of the patients. In light of the abundance of some of the causative molds in compost, agricultural and flower fields, occupational activities related to such environments should be discouraged for patients with cystic fibrosis (CF). In addition, the microbiological monitoring of their indoor environment, including analysis of air and dust on surfaces, is essential to propose preventive measures aiming to reduce the exposure to environmental molds. Nevertheless, some specific niches were also identified in the indoor environment, in relation with humidity which favors the growth of thermotolerant molds. Potted plants were reported as indoor reservoirs for Scedosporium species. Likewise, Exophiala dermatitidis may be spread in the kitchen via dishwashers. However, genotype studies are still required to establish the link between dishwashers and colonization of the airways of CF patients by this black yeast. Moreover, as nothing is known regarding the other filamentous fungi associated with CF, further studies should be conducted to identify other potential specific niches in the habitat.

丝状真菌经常定植于囊性纤维化患者的呼吸道,并可能导致严重的疾病,如过敏性支气管肺曲霉病。能够在患者呼吸道中长期定植的最常见丝状真菌是烟曲霉(Aspergillus fumigatus)和鞘孢霉(Scedosporium species)。由于可用药物数量有限,而且一些致病菌是具有多重耐药性的微生物,因此确定治疗策略可能具有挑战性。我们需要了解室外和室内环境中的真菌生态位,以了解患者受到污染的原因。鉴于堆肥、农业和花卉领域存在大量的致病霉菌,囊性纤维化(CF)患者不应从事与这些环境有关的职业活动。此外,对其室内环境进行微生物监测,包括分析空气和表面灰尘,对于提出旨在减少接触环境霉菌的预防措施至关重要。然而,在室内环境中也发现了一些与湿度有关的特殊龛位,这些龛位有利于耐热霉菌的生长。据报道,盆栽植物是 Scedosporium 的室内贮藏室。同样,皮炎外孢子菌也可能通过洗碗机在厨房中传播。然而,要确定洗碗机与这种黑色酵母菌在 CF 患者呼吸道中的定植之间的联系,仍需进行基因型研究。此外,由于对与 CF 相关的其他丝状真菌一无所知,因此应开展进一步研究,以确定栖息地中其他潜在的特定壁龛。
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引用次数: 0
Fatal Fulminant Histoplasmosis Diagnosed by Cytopathology. 通过细胞病理学诊断出致命的暴发性组织胞浆菌病。
IF 3.6 3区 生物学 Q2 MYCOLOGY Pub Date : 2024-02-19 DOI: 10.1007/s11046-023-00826-x
Nao Hara, Tasleem Banu, Sayed Shahabuddin Hoseini, Thomas Pustorino, Ljiljana Vasovic, Liying Han, Marina Keller, Vishnu Chaturvedi
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引用次数: 0
期刊
Mycopathologia
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