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The prevalence of damaged tails in New Zealand dairy cattle. 新西兰奶牛尾巴受损的普遍程度。
IF 1.4 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2024-05-01 Epub Date: 2024-03-11 DOI: 10.1080/00480169.2024.2321180
E L Cuttance, W A Mason, S Y Hea, M A Bryan, R A Laven

Aims: To undertake a survey of the prevalence of tail deviations, trauma and shortening on a representative selection of New Zealand dairy farms, and to assess whether sampling based on milking order could be used instead of random sampling across the herd to estimate prevalence.

Methods: This was a cross-sectional observational study, with 200 randomly selected farms enrolled across nine regions of New Zealand via selected veterinary practices (one/region). Veterinary clinics enrolled 20-25 farms each depending on region, with 1-2 trained technicians scoring per region. All cows (n = 92,348) present at a milking or pregnancy testing event were tail scored using a modified version of the New Zealand Veterinary Association Industry Scoring System. Palpated lesions were recorded as deviated (i.e. non-linear deformity), shortened (tail shorter than normal) or traumatic (all other lesions). The location of lesions was defined by dividing the tail into three equal zones: upper, middle and lower. A cow could have more than one lesion type and location, and/or multiple lesions of the same type, but for the prevalence calculation, only the presence or absence of a particular lesion was assessed. Prevalence of tail damage calculated using whole herd scoring was compared to random sampling across the herd and sampling from the front and back of the milking order. Bootstrap sampling with replacement was used to generate the sampling distributions across seven sample sizes ranging from 40-435 cows.

Results: When scoring all cows, the median prevalence for deviation was 9.5 (min 0.9, max 40.3)%; trauma 0.9 (min 0, max 10.7)%, and shortening was 4.5 (min 1.3, max 10.8)%. Deviation and trauma prevalence varied between regions; the median prevalence of deviations ranged from 6% in the West Coast to 13% in Waikato, and the median prevalence of all tail damage from 7% in the West Coast to 29% in Southland. Sampling based on milking order was less precise than random sampling across the herd. With the latter and using 157 cows, 95% of prevalence estimates were within 5% of the whole herd estimate, but sampling based on milking order needed > 300 cows to achieve the same precision.

Conclusions and clinical relevance: The proportion of cows identified as having damaged tails was consistent with recent reports from New Zealand and Ireland, but at 11.5%, the proportion of cows with trauma or deviation is below acceptable standards. An industry-wide programme is needed to reduce the proportion of affected cows.

目的:对新西兰奶牛场中具有代表性的部分牧场进行尾部偏差、外伤和短缩发生率的调查,并评估是否可以使用基于挤奶顺序的抽样而不是整个牛群的随机抽样来估计发生率:这是一项横断面观察研究,通过选定的兽医诊所(每个地区一家)在新西兰的九个地区随机抽取 200 个牧场。兽医诊所根据地区不同,每个诊所负责 20-25 个牧场,每个地区有 1-2 名训练有素的技术人员负责评分。所有参加挤奶或妊娠检测的奶牛(n = 92,348 头)均使用新西兰兽医协会行业评分系统的改进版进行尾部评分。触诊到的病变记录为偏离(即非线性畸形)、缩短(尾巴比正常短)或外伤(所有其他病变)。将牛尾分为上、中、下三个等分区来确定病变位置。一头奶牛可能有不止一种病变类型和位置,和/或同一类型的多种病变,但在计算患病率时,只评估是否存在特定病变。用全牛群评分法计算的尾部损伤流行率与全牛群随机取样法和挤奶顺序前后取样法进行了比较。使用带替换的Bootstrap抽样法生成从40-435头奶牛的七个样本的抽样分布:对所有奶牛进行评分时,偏离率中位数为 9.5%(最低 0.9%,最高 40.3%);外伤率中位数为 0.9%(最低 0%,最高 10.7%);缩短率中位数为 4.5%(最低 1.3%,最高 10.8%)。偏离和外伤发生率因地区而异;偏离发生率的中位数从西海岸的6%到怀卡托的13%不等,所有尾部损伤发生率的中位数从西海岸的7%到南地的29%不等。基于挤奶顺序的抽样不如整个牛群的随机抽样精确。后者使用157头奶牛,95%的患病率估计值在整个牛群估计值的5%以内,但基于挤奶顺序的抽样需要>300头奶牛才能达到同样的精确度:被鉴定为牛尾受损的奶牛比例与新西兰和爱尔兰最近的报告一致,但有外伤或偏差的奶牛比例为 11.5%,低于可接受的标准。需要在整个行业开展一项计划,以降低受影响奶牛的比例。
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引用次数: 0
Anaesthesia-related morbidity associated with recumbent, low-field magnetic resonance imaging of horses 马匹卧姿低场磁共振成像与麻醉相关的发病率
IF 1.4 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2024-04-07 DOI: 10.1080/00480169.2024.2321176
MG Myhre, A Azeem, M Barrett
Medical records from 2009 to 2021 from a private equine referral hospital in Rochester, NH, USA were analysed for cases that underwent general anaesthesia for low-field MRI of the distal limb. Thes...
我们分析了美国新罕布什尔州罗切斯特市一家私立马科转诊医院 2009 年至 2021 年期间的医疗记录,其中包括对远端肢体低场磁共振成像进行全身麻醉的病例。这些...
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引用次数: 0
Pharmacokinetics of bromoform in dairy heifers 乳用小母牛体内溴甲烷的药代动力学
IF 1.4 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2024-04-03 DOI: 10.1080/00480169.2024.2330914
P Bhusal, MC Lay, KL Kraakman, GE Corbett, NR Gladden
To determine the pharmacokinetics in dairy heifers after oral and IV administration of bromoform, a potential antimethanogenic agent found in red seaweed, Asparagopsis spp.Twenty-four dairy heifers...
目的是测定乳用小母牛口服和静脉注射溴甲烷后的药代动力学,溴甲烷是红海藻(Asparagopsis spp.)中一种潜在的抗甲烷生成剂。
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引用次数: 0
The risks and consequences of a high pathogenicity avian influenza outbreak in Aotearoa New Zealand. 新西兰奥特亚罗瓦爆发高致病性禽流感的风险和后果。
IF 1.1 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2024-03-01 Epub Date: 2024-02-04 DOI: 10.1080/00480169.2023.2294915
B D Gartrell, M J Jolly, S A Hunter
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引用次数: 0
Reviewer List 2023. 2023 年审稿人名单。
IF 1.4 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2024-03-01 Epub Date: 2024-02-04 DOI: 10.1080/00480169.2024.2305249
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引用次数: 0
Development of LIME-NZ: a generic tool for prompt estimation of economic impacts of disease for New Zealand livestock. 开发 LIME-NZ:用于迅速估算疾病对新西兰牲畜经济影响的通用工具。
IF 1.4 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2024-03-01 Epub Date: 2024-02-04 DOI: 10.1080/00480169.2023.2294792
M Wada, C Compton, R Hickson, P Bingham

Aims: To develop a simple and robust generic tool to measure the impacts of livestock diseases on New Zealand dairy, beef and sheep farms using enterprise gross margin models.

Methods: The most recent (2018-2020) livestock production benchmarking data was extracted from industry-led economic surveys. Gross margin models were built for each enterprise type, accounting for 11 dairy farm types and 16 farm types for beef and sheep. Disease parameters, including changes in mortality, reproduction performance, milk yield, price of animals and culling rate, as well as additional expenses for veterinary intervention, were applied to the infected compartment of the herd/flock using the assumed annual within-herd disease incidence. Farm-level disease impacts were estimated as the difference in annual profit between the baseline and infected farm. The baseline gross margin models were validated against the industry data. The disease impact models were validated using a recently published study on bovine viral diarrhoea (BVD). The impact assessment tool, LIME-NZ, was developed using the statistical software R and implemented in the web-based R package Shiny. The input parameters can be varied interactively to obtain a range of disease impacts for uncertain disease parameters.

Results: The baseline gross margin models demonstrated reasonable accuracy with a mean percentage error of <14% when compared with the industry reports. The estimated annual impacts of BVD were comparable to those reported in the BVD study, NZ$38.5-140.4 thousand and $0.9-32.6 thousand per farm per year for dairy and beef enterprises, respectively.

Conclusions: LIME-NZ can be used to rapidly obtain the likely economic impacts of diseases that are endemic, recently introduced or at increased risk of introduction in the New Zealand context. This will aid communication and decision-making among government agencies and the livestock industry, including veterinarians and livestock producers, about the management of diseases, until refined information becomes available to improve decision-making.

目的:利用企业毛利率模型,开发一种简单稳健的通用工具,用于衡量牲畜疾病对新西兰奶牛、牛肉和绵羊农场的影响:从行业主导的经济调查中提取最新(2018-2020 年)的牲畜生产基准数据。为每种企业类型建立毛利率模型,包括 11 种奶牛场类型和 16 种牛羊场类型。疾病参数,包括死亡率、繁殖性能、产奶量、牲畜价格和淘汰率的变化,以及兽医干预的额外费用,采用假定的年度群内疾病发病率,应用于受感染的牛群/羊群。农场层面的疾病影响按基线农场与受感染农场之间的年利润差异估算。基线毛利模型根据行业数据进行了验证。疾病影响模型通过最近发表的牛病毒性腹泻 (BVD) 研究报告进行了验证。影响评估工具 LIME-NZ 是使用 R 统计软件开发的,并在基于网络的 R 软件包 Shiny 中实施。输入参数可以交互式改变,以获得不确定疾病参数的一系列疾病影响:结果:基线毛利率模型显示出合理的准确性,平均百分比误差为结论:LIME-NZ 可用于快速获取新西兰流行病、新近引入或引入风险增加的疾病可能造成的经济影响。这将有助于政府机构和畜牧业(包括兽医和畜牧生产者)之间就疾病管理进行沟通和决策,直至获得改进决策的完善信息。
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引用次数: 0
Osteoinductive squamous cell carcinoma associated with a putative novel papillomavirus on the digit of a cat. 骨诱导鳞状细胞癌与推测的新型乳头状瘤病毒在猫的手指。
IF 1.4 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2024-03-01 Epub Date: 2024-02-04 DOI: 10.1080/00480169.2023.2285294
J S Munday, M E Dunbar, P Wightman, S Piripi

Case history and clinical findings: An approximately 10-year-old, castrated male domestic short-haired cat developed swelling and ulceration of the second digit of the right front paw. Radiographs revealed a spherical soft tissue swelling with irregular distal margins that contained multiple lacy mineral opacities. The digit was amputated and submitted for histology. No recurrence has been observed 7 months after amputation.

Pathological and molecular findings: Histology revealed a moderately well-circumscribed proliferation of well-differentiated squamous cells arranged in trabeculae and nests. Numerous thin spicules of osseous metaplasia were visible throughout the neoplasm. Around 70% of the neoplastic cells contained papillomavirus-induced cell changes including large amphophilic cytoplasmic bodies and cells with shrunken nuclei surrounded by a clear halo. Intense p16CDKN2A protein immunostaining was visible within the neoplastic cells, suggesting papillomavirus-induced changes in cell regulation. A DNA sequence from a putative novel Taupapillomavirus type was amplified from the neoplasm.

Diagnosis: Osteoinductive squamous cell carcinoma associated with a putative novel papillomavirus type.

Clinical relevance: The findings in this case increase the number of papillomavirus types known to infect cats, and the squamous cell carcinoma had histological features that have not been previously reported. The neoplasm was not as invasive as is typical for a squamous cell carcinoma and excision appeared curative. This is the first report of an osteoinductive squamous cell carcinoma of the skin of cats and the neoplasm had a unique radiographic appearance.

病例史和临床表现:一只大约10岁,阉割的雄性家养短毛猫右前爪第二趾肿胀和溃疡。x线片显示球形软组织肿胀,远端边缘不规则,包含多个花边矿物混浊。手指被截肢并提交组织学检查。截肢后7个月未见复发。病理和分子检查结果:组织学显示在小梁和巢中排列的分化良好的鳞状细胞增殖。肿瘤内可见大量骨化生的细针状物。约70%的肿瘤细胞含有乳头瘤病毒诱导的细胞改变,包括大的嗜两性细胞质体和细胞核被清晰晕包围的萎缩细胞。肿瘤细胞内可见强烈的p16CDKN2A蛋白免疫染色,提示乳头瘤病毒诱导的细胞调节变化。从肿瘤中扩增出推定的新型陶乳头瘤病毒类型的DNA序列。诊断:骨诱导性鳞状细胞癌与推测的新型乳头瘤病毒类型相关。临床相关性:本病例的发现增加了已知感染猫的乳头状瘤病毒类型的数量,并且鳞状细胞癌具有以前未报道的组织学特征。该肿瘤不像典型的鳞状细胞癌那样具有侵袭性,切除似乎可以治愈。本文首次报道猫皮肤骨诱导性鳞状细胞癌,该肿瘤具有独特的影像学表现。
{"title":"Osteoinductive squamous cell carcinoma associated with a putative novel papillomavirus on the digit of a cat.","authors":"J S Munday, M E Dunbar, P Wightman, S Piripi","doi":"10.1080/00480169.2023.2285294","DOIUrl":"10.1080/00480169.2023.2285294","url":null,"abstract":"<p><strong>Case history and clinical findings: </strong>An approximately 10-year-old, castrated male domestic short-haired cat developed swelling and ulceration of the second digit of the right front paw. Radiographs revealed a spherical soft tissue swelling with irregular distal margins that contained multiple lacy mineral opacities. The digit was amputated and submitted for histology. No recurrence has been observed 7 months after amputation.</p><p><strong>Pathological and molecular findings: </strong>Histology revealed a moderately well-circumscribed proliferation of well-differentiated squamous cells arranged in trabeculae and nests. Numerous thin spicules of osseous metaplasia were visible throughout the neoplasm. Around 70% of the neoplastic cells contained papillomavirus-induced cell changes including large amphophilic cytoplasmic bodies and cells with shrunken nuclei surrounded by a clear halo. Intense p16<sup>CDKN2A</sup> protein immunostaining was visible within the neoplastic cells, suggesting papillomavirus-induced changes in cell regulation. A DNA sequence from a putative novel <i>Taupapillomavirus</i> type was amplified from the neoplasm<b>.</b></p><p><strong>Diagnosis: </strong>Osteoinductive squamous cell carcinoma associated with a putative novel papillomavirus type.</p><p><strong>Clinical relevance: </strong>The findings in this case increase the number of papillomavirus types known to infect cats, and the squamous cell carcinoma had histological features that have not been previously reported. The neoplasm was not as invasive as is typical for a squamous cell carcinoma and excision appeared curative. This is the first report of an osteoinductive squamous cell carcinoma of the skin of cats and the neoplasm had a unique radiographic appearance.</p>","PeriodicalId":19322,"journal":{"name":"New Zealand veterinary journal","volume":" ","pages":"112-117"},"PeriodicalIF":1.4,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138478227","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Health impacts of poor water quality on an endangered shorebird breeding programme in Aotearoa New Zealand. 水质不佳对新西兰奥特亚濒危滨鸟繁殖计划的健康影响。
IF 1.4 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2024-03-01 Epub Date: 2024-02-04 DOI: 10.1080/00480169.2023.2263425
B D Gartrell, S Hunter, R Collen, M Jolly, K McInnes, A Richardson, C Reed, R Ward, A Pita

Case history: Two clusters of mortality among endangered tūturuatu/tchūriwat'/shore plover (Thinornis novaeseelandiae) have occurred at captive breeding facilities around New Zealand in recent years. In the first, four chicks died at Pūkaha National Wildlife Centre (Mount Bruce, NZ) in February 2016, and in the second five adult birds at the Cape Sanctuary (Cape Kidnappers, NZ) died in 2022.

Clinical findings: In 2016, four chicks were noted to become weak, have increased vocalisations and closed eyes prior to death. The remaining chicks were treated for 5 days with amoxycillin/clavulanate orally twice daily. Water containers and brooders were cleaned and disinfected with chlorhexidine. No further mortality was seen.In the 2022 cluster, three adult breeding birds died acutely and five others showed inappetence, weight loss and diarrhoea approximately 10 days after heavy rains flooded the local river. The five birds were treated with amoxycillin/clavulanate orally twice daily and oral fluids for 5 days. Two birds died and three survived. No breeding occurred in the aviaries in the following season.

Pathological findings: In 2016, the chicks showed pulmonary changes ranging from congestion and oedema to heterophilic inflammation consistent with septicaemia.In 2022, the adult birds showed proliferation of bacteria in the distal small intestine associated with mucosal ulceration and heterophilic infiltration. Acid-fast staining of the caecal contents in one bird showed organisms consistent with Cryptosporidium spp.

Laboratory findings: Aerobic bacterial cultures of the lung and liver of two affected chicks carried out in 2016 showed heavy growth of Plesiomonas shigelloides. The same organism was cultured from water trays and holding tanks containing water boatmen (Sigara arguta) on which the chicks were fed.In 2022, cultures from the livers of three dead birds each showed a mixed bacterial growth with differing dominant organisms (Aeromonas sobria, Hafnia alvei, Citrobacter freundii and an Enterococcus sp.). PCR and sequencing confirmed Cryptosporidium parvum in the caecum of one bird. Fresh faeces from 24 breeding birds from the captive breeding facilities were negative by PCR for Cryptosporidium spp.The captive breeding facilities obtain water for the aviaries and aquatic invertebrates to feed to the chicks from local freshwater sources. Water quality testing at the Cape Sanctuary revealed concentrations of faecal indicator bacteria in excess of safe drinking water guidelines, with peaks following heavy rainfall.

Clinical relevance: Fluctuations in water quality associated with mammalian faecal bacteria can adversely affect bird health and impact on captive rearing of endangered wildlife.

病例史:近年来,在新西兰各地的圈养繁殖设施中,发生了两起濒临灭绝的túturuatu/tchúriwat’/滨鸻(Thinornis novaeseelandiae)集群死亡事件。第一只是2016年2月在Púkaha国家野生动物中心(新西兰布鲁斯山)死亡的四只雏鸟,第二只是2022年在开普保护区(新西兰绑架角)死亡的五只成年鸟。其余的雏鸡用阿莫西林/克拉维酸盐口服治疗5天,每天两次。用水容器和育种器进行清洁,并用氯己定消毒。没有发现进一步的死亡。在2022年的集群中,暴雨淹没当地河流约10天后,三只成年种鸟急性死亡,另外五只出现食欲不振、体重减轻和腹泻。五只鸟接受阿莫西林/克拉维酸盐口服治疗,每天两次,口服液治疗5天。两只鸟死了,三只活了下来。在接下来的季节里,鸟舍里没有繁殖。病理结果:2016年,雏鸡出现肺部变化,从充血和水肿到与败血症一致的嗜异性炎症。2022年,成年鸟类的小肠远端出现细菌增殖,与粘膜溃疡和嗜异性浸润有关。对一只鸟盲肠内容物的抗酸染色显示,生物体与隐孢子虫属一致。实验室发现:2016年对两只受影响的雏鸡的肺和肝进行的需氧细菌培养显示,志贺邻单胞菌大量生长。同样的生物体是从盛有水的船夫(Sigara arguta)的水槽和储水槽中培养出来的,在2022年,从三只死鸟的肝脏培养物中,每只都显示出与不同优势生物(索氏气单胞菌、哈夫尼亚-阿尔维菌、弗氏柠檬酸杆菌和一种肠球菌)的混合细菌生长。PCR和测序证实了一只鸟盲肠中的微小隐孢子虫。来自圈养繁殖设施的24只种鸟的新鲜粪便经隐孢子虫PCR检测呈阴性。圈养繁殖设施从当地淡水来源为饲养给小鸡的鸟舍和水生无脊椎动物取水。开普保护区的水质测试显示,粪便指示细菌的浓度超过了安全饮用水指南,在强降雨后达到峰值。临床相关性:与哺乳动物粪便细菌相关的水质波动会对鸟类健康和濒危野生动物的圈养产生不利影响。
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引用次数: 0
Farm management and husbandry practices associated with spontaneous humeral fractures in New Zealand dairy heifers. 与新西兰小母牛自发性肱骨骨折相关的农场管理和饲养实践。
IF 1.4 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2024-03-01 Epub Date: 2024-02-04 DOI: 10.1080/00480169.2023.2278476
A Wehrle-Martinez, K E Lawrence, P J Back, C W Rogers, K E Dittmer

Aims: To use a farm-based survey to identify characteristics of the New Zealand dairy system associated with the risk of spontaneous humeral fracture in dairy heifers.

Methods: A questionnaire was designed and made available in print and online to collect information from dairy farmers and/or veterinarians, across New Zealand, about the management and nutrition of cows from birth to first lactation. Data were collected from July 2019 to March 2020 from farms that either had recorded (case farms) or not recorded (control farms) cases of humeral fractures in dairy heifers.

Results: A total of 68 completed questionnaires were returned, with 35 responses from case farms and 33 responses from control farms. Twenty-six responses (38%) were from the South Island (13 case farms and 13 control farms) and 38 responses (56%) were from the North Island (20 case farms and 18 control farms). For four questionnaires (6%) farm location was not given. Adjusting for the effect of age when calves accessed pasture, case farms had increased odds of having Holstein-Friesian Jersey crossbreed cows as the predominant breed (OR = 9.7; 95% CI = 3.1-36.0; p < 0.001). Adjusting for the effect of breed, allowing calves access to pasture a week later decreased the odds of being a case farm (OR = 0.68; 95% CI = 0.47-0.90; p = 0.006).

Conclusions: Cows being Holstein-Friesian Jersey crossbreed was identified as a possible risk factor associated with spontaneous humeral fracture in dairy heifers in New Zealand. Given the small sample size, the likely multifactorial aetiology for humeral fractures, and the non-randomised survey, this risk factor, and the possible association between age at turn out and herd production with humeral fractures, all require further investigation.

目的:利用一项基于农场的调查来确定新西兰乳制品系统的特征与乳制品小母牛自发性肱骨骨折的风险相关。方法:设计了一份问卷,并以印刷品和在线形式提供,以收集新西兰各地奶农和/或兽医关于奶牛从出生到首次泌乳的管理和营养的信息。数据收集于2019年7月至2020年3月,来自记录(病例养殖场)或未记录(对照养殖场)奶牛肱骨骨折病例的养殖场。结果:共返回68份完整的问卷,其中35份来自病例农场,33份来自对照农场。26份回复(38%)来自南岛(13个病例农场和13个对照农场),38份回复(56%)来自北岛(20个病例农场,18个对照农场。四份调查问卷(6%)没有给出农场的位置。考虑到小牛进入牧场时年龄的影响,案例农场增加了荷斯坦-弗里斯-泽西杂交奶牛作为主要品种的几率(OR = 9.7;95%CI = 3.1-36.0;p 结论:在新西兰,荷斯坦-弗里斯-泽西杂交奶牛被确定为与奶牛自发性肱骨骨折相关的可能危险因素。鉴于样本量小,肱骨骨折可能的多因素病因,以及非随机调查,这一风险因素,以及出生年龄和群体生产与肱骨骨折之间的可能关联,都需要进一步研究。
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引用次数: 0
Bovine viral diarrhoea viruses from New Zealand belong predominantly to the BVDV-1a genotype. 新西兰的牛病毒性腹泻病毒主要属于 BVDV-1a 基因型。
IF 1.4 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2024-03-01 Epub Date: 2024-02-04 DOI: 10.1080/00480169.2023.2291039
M Dunowska, R Lal, S D Dissanayake, S D Bond, E Burrows, J Moffat, L Howe

Aim: To determine which genotypes of bovine viral diarrhoea virus (BVDV) circulate among cattle in New Zealand.

Methods: Samples comprised BVDV-1-positive sera sourced from submissions to veterinary diagnostic laboratories in 2019 (n = 25), 2020 (n = 59) and 2022 (n = 74) from both beef and dairy herds, as well as archival BVDV-1 isolates (n = 5). Fragments of the 5' untranslated region (5' UTR) and glycoprotein E2 coding sequence of the BVDV genome were amplified and sequenced. The sequences were aligned to each other and to international BVDV-1 sequences to determine their similarities and phylogenetic relationships. The 5' UTR sequences were also used to create genetic haplotype networks to determine if they were correlated with selected traits (location, type of farm, and year of collection).

Results: The 5' UTR sequences from New Zealand BVDV were closely related to each other, with pairwise identities between 89% and 100%. All clustered together and were designated as BVDV-1a (n = 144) or BVDV-1c (n = 5). There was no evidence of a correlation between the 5' UTR sequence and the geographical origin within the country, year of collection or the type of farm. Partial E2 sequences from New Zealand BVDV (n = 76) showed 74-100% identity to each other and clustered in two main groups. The subtype assignment based on the E2 sequence was the same as based on the 5' UTR analysis. This is the first comprehensive analysis of genomic variability of contemporary New Zealand BVDV based on the analysis of the non-coding (5' UTR) and coding (E2) sequences.

Conclusions and clinical relevance: Knowledge of the diversity of the viruses circulating in the country is a prerequisite for the development of effective control strategies, including a selection of suitable vaccines. The data presented suggest that New Zealand BVDV are relatively homogeneous, which should facilitate eradication efforts including selection or development of the most suitable vaccines.

目的:确定新西兰牛只中流行的牛病毒性腹泻病毒(BVDV)基因型:样本包括 2019 年(n = 25)、2020 年(n = 59)和 2022 年(n = 74)提交给兽医诊断实验室的 BVDV-1 阳性血清(来自肉牛和奶牛群),以及存档的 BVDV-1 分离物(n = 5)。对BVDV基因组的5' 非翻译区(5' UTR)和糖蛋白E2编码序列片段进行了扩增和测序。这些序列相互比对,并与国际 BVDV-1 序列比对,以确定它们的相似性和系统发育关系。5' UTR序列还被用于创建遗传单倍型网络,以确定它们是否与所选性状(地点、农场类型和采集年份)相关:结果:新西兰 BVDV 的 5' UTR 序列彼此密切相关,配对相同度介于 89% 和 100% 之间。所有序列都聚集在一起,被命名为 BVDV-1a(n = 144)或 BVDV-1c(n = 5)。没有证据表明 5' UTR 序列与国内的地理来源、采集年份或农场类型有关。新西兰 BVDV 的部分 E2 序列(n = 76)显示出 74-100% 的相同性,并分为两大类。根据 E2 序列划分的亚型与根据 5' UTR 分析划分的亚型相同。这是首次基于非编码(5' UTR)和编码(E2)序列分析对当代新西兰BVDV基因组变异性进行的全面分析:了解该国流行病毒的多样性是制定有效控制策略(包括选择合适疫苗)的先决条件。所提供的数据表明,新西兰的 BVDV 相对比较单一,这应有助于根除工作,包括选择或开发最合适的疫苗。
{"title":"Bovine viral diarrhoea viruses from New Zealand belong predominantly to the BVDV-1a genotype.","authors":"M Dunowska, R Lal, S D Dissanayake, S D Bond, E Burrows, J Moffat, L Howe","doi":"10.1080/00480169.2023.2291039","DOIUrl":"10.1080/00480169.2023.2291039","url":null,"abstract":"<p><strong>Aim: </strong>To determine which genotypes of bovine viral diarrhoea virus (BVDV) circulate among cattle in New Zealand.</p><p><strong>Methods: </strong>Samples comprised BVDV-1-positive sera sourced from submissions to veterinary diagnostic laboratories in 2019 (n = 25), 2020 (n = 59) and 2022 (n = 74) from both beef and dairy herds, as well as archival BVDV-1 isolates (n = 5). Fragments of the 5' untranslated region (5' UTR) and glycoprotein E2 coding sequence of the BVDV genome were amplified and sequenced. The sequences were aligned to each other and to international BVDV-1 sequences to determine their similarities and phylogenetic relationships. The 5' UTR sequences were also used to create genetic haplotype networks to determine if they were correlated with selected traits (location, type of farm, and year of collection).</p><p><strong>Results: </strong>The 5' UTR sequences from New Zealand BVDV were closely related to each other, with pairwise identities between 89% and 100%. All clustered together and were designated as BVDV-1a (n = 144) or BVDV-1c (n = 5). There was no evidence of a correlation between the 5' UTR sequence and the geographical origin within the country, year of collection or the type of farm. Partial E2 sequences from New Zealand BVDV (n = 76) showed 74-100% identity to each other and clustered in two main groups. The subtype assignment based on the E2 sequence was the same as based on the 5' UTR analysis. This is the first comprehensive analysis of genomic variability of contemporary New Zealand BVDV based on the analysis of the non-coding (5' UTR) and coding (E2) sequences.</p><p><strong>Conclusions and clinical relevance: </strong>Knowledge of the diversity of the viruses circulating in the country is a prerequisite for the development of effective control strategies, including a selection of suitable vaccines. The data presented suggest that New Zealand BVDV are relatively homogeneous, which should facilitate eradication efforts including selection or development of the most suitable vaccines.</p>","PeriodicalId":19322,"journal":{"name":"New Zealand veterinary journal","volume":" ","pages":"66-78"},"PeriodicalIF":1.4,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139425116","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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New Zealand veterinary journal
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